AlfalfaGEDB | MS.gene40630

M. sativa cultivar XinJiangDaYe / MS.gene40630

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF02362.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40630.t1	XP_003606842.1	96.3	429	13	1	1	426	1	429	5.30E-233	816.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40630.t1	Q8L3W1	50.4	393	139	7	1	391	1	339	6.9e-96	352.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40630.t1	G7JEY1	96.3	429	13	1	1	426	1	429	3.9e-233	816.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene40630.t1	TF	B3

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049222	MS.gene40630	-0.82088	5.43E-53	-1.69E-46
MS.gene049298	MS.gene40630	0.823965	1.04E-53	-1.69E-46
MS.gene049633	MS.gene40630	-0.817359	3.44E-52	-1.69E-46
MS.gene050170	MS.gene40630	-0.815751	7.87E-52	-1.69E-46
MS.gene050225	MS.gene40630	0.811667	6.24E-51	-1.69E-46
MS.gene050323	MS.gene40630	-0.820579	6.37E-53	-1.69E-46
MS.gene050338	MS.gene40630	0.813266	2.79E-51	-1.69E-46
MS.gene050444	MS.gene40630	-0.828981	6.64E-55	-1.69E-46
MS.gene050790	MS.gene40630	0.822988	1.76E-53	-1.69E-46
MS.gene05080	MS.gene40630	-0.804179	2.45E-49	-1.69E-46
MS.gene050868	MS.gene40630	-0.807614	4.64E-50	-1.69E-46
MS.gene050871	MS.gene40630	-0.804612	1.99E-49	-1.69E-46
MS.gene050904	MS.gene40630	-0.839647	1.40E-57	-1.69E-46
MS.gene051317	MS.gene40630	-0.848382	6.35E-60	-1.69E-46
MS.gene051838	MS.gene40630	-0.826322	2.89E-54	-1.69E-46
MS.gene053108	MS.gene40630	0.88712	1.89E-72	-1.69E-46
MS.gene053776	MS.gene40630	0.81204	5.18E-51	-1.69E-46
MS.gene054706	MS.gene40630	0.811291	7.53E-51	-1.69E-46
MS.gene05470	MS.gene40630	-0.81134	7.35E-51	-1.69E-46
MS.gene054941	MS.gene40630	0.835156	1.98E-56	-1.69E-46
MS.gene054999	MS.gene40630	0.807911	4.01E-50	-1.69E-46
MS.gene055577	MS.gene40630	-0.800724	1.26E-48	-1.69E-46
MS.gene055748	MS.gene40630	-0.820027	8.52E-53	-1.69E-46
MS.gene055751	MS.gene40630	-0.819159	1.34E-52	-1.69E-46
MS.gene05589	MS.gene40630	-0.826165	3.15E-54	-1.69E-46
MS.gene056387	MS.gene40630	-0.859971	2.86E-63	-1.69E-46
MS.gene056504	MS.gene40630	-0.811658	6.27E-51	-1.69E-46
MS.gene056583	MS.gene40630	0.85076	1.38E-60	-1.69E-46
MS.gene056618	MS.gene40630	0.967369	3.50E-127	-1.69E-46
MS.gene056678	MS.gene40630	0.801934	7.12E-49	-1.69E-46
MS.gene057101	MS.gene40630	0.819772	9.74E-53	-1.69E-46
MS.gene058128	MS.gene40630	0.809683	1.68E-50	-1.69E-46
MS.gene058334	MS.gene40630	0.820782	5.72E-53	-1.69E-46
MS.gene058853	MS.gene40630	0.807528	4.84E-50	-1.69E-46
MS.gene05926	MS.gene40630	0.816162	6.37E-52	-1.69E-46
MS.gene059526	MS.gene40630	0.820041	8.46E-53	-1.69E-46
MS.gene05960	MS.gene40630	0.801746	7.79E-49	-1.69E-46
MS.gene059905	MS.gene40630	0.809767	1.61E-50	-1.69E-46
MS.gene06042	MS.gene40630	0.812299	4.55E-51	-1.69E-46
MS.gene060762	MS.gene40630	-0.824506	7.78E-54	-1.69E-46
MS.gene060823	MS.gene40630	0.815664	8.23E-52	-1.69E-46
MS.gene060982	MS.gene40630	-0.812606	3.90E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40630.t1	MTR_4g068320	96.270	429	13	1	1	426	1	429	0.0	850
MS.gene40630.t1	MTR_1g034240	61.785	437	149	7	2	426	3	433	0.0	546
MS.gene40630.t1	MTR_1g034210	47.475	396	173	7	4	397	5	367	5.11e-115	341
MS.gene40630.t1	MTR_1g034210	45.042	353	159	7	4	354	5	324	4.90e-91	278
MS.gene40630.t1	MTR_3g005480	35.971	139	84	1	3	141	18	151	3.14e-24	101
MS.gene40630.t1	MTR_3g005480	37.241	145	71	6	257	391	129	263	6.97e-16	77.8
MS.gene40630.t1	MTR_5g070440	42.157	102	59	0	3	104	18	119	1.84e-23	99.8
MS.gene40630.t1	MTR_5g070440	36.170	141	69	4	263	388	134	268	2.10e-14	73.6
MS.gene40630.t1	MTR_3g005490	40.000	110	66	0	3	112	18	127	1.16e-22	97.1
MS.gene40630.t1	MTR_3g005490	35.821	134	70	5	267	391	136	262	1.32e-13	70.9
MS.gene40630.t1	MTR_3g061290	37.778	135	74	2	6	140	12	136	2.01e-22	94.7
MS.gene40630.t1	MTR_8g103940	40.741	108	64	0	6	113	39	146	5.68e-22	98.2
MS.gene40630.t1	MTR_8g103940	38.843	121	66	5	280	399	228	341	1.31e-17	85.1
MS.gene40630.t1	MTR_7g050720	40.909	110	63	1	1	110	5	112	6.89e-22	95.9
MS.gene40630.t1	MTR_7g050720	35.115	131	74	4	268	388	186	315	3.65e-14	73.6
MS.gene40630.t1	MTR_7g050560	41.905	105	59	1	6	110	13	115	6.98e-22	95.9
MS.gene40630.t1	MTR_7g050560	30.303	132	85	3	268	393	165	295	2.21e-11	65.1
MS.gene40630.t1	MTR_3g061310	36.364	132	74	2	6	137	12	133	7.17e-22	95.5
MS.gene40630.t1	MTR_3g061350	36.364	132	75	2	6	137	12	134	9.35e-22	95.1
MS.gene40630.t1	MTR_7g050710	41.414	99	58	0	6	104	13	111	1.55e-21	95.1
MS.gene40630.t1	MTR_7g050710	34.848	132	78	2	270	393	181	312	9.17e-15	75.5
MS.gene40630.t1	MTR_3g061320	35.606	132	75	2	6	137	12	133	9.82e-21	92.0
MS.gene40630.t1	MTR_3g098790	38.393	112	67	1	6	117	13	122	1.65e-20	92.4
MS.gene40630.t1	MTR_3g098790	36.585	123	72	2	277	393	182	304	8.45e-18	84.3
MS.gene40630.t1	MTR_1g021330	24.812	399	245	8	18	412	38	385	2.20e-20	92.8
MS.gene40630.t1	MTR_3g005420	41.176	102	60	0	3	104	286	387	3.75e-20	93.2
MS.gene40630.t1	MTR_3g005420	33.981	103	67	1	3	104	37	139	1.61e-15	79.0
MS.gene40630.t1	MTR_3g005420	34.848	132	75	4	264	391	415	539	1.61e-14	75.9
MS.gene40630.t1	MTR_3g005420	36.538	156	74	9	274	417	157	299	1.83e-11	66.2
MS.gene40630.t1	MTR_3g061330	34.848	132	76	2	6	137	12	133	4.50e-20	89.4
MS.gene40630.t1	MTR_7g050580	38.095	105	63	1	6	110	13	115	6.07e-20	90.5
MS.gene40630.t1	MTR_7g050580	34.127	126	77	2	274	393	170	295	9.12e-14	72.0
MS.gene40630.t1	MTR_1g021440	28.000	400	223	16	11	392	27	379	7.61e-20	91.3
MS.gene40630.t1	MTR_7g050590	41.667	96	54	1	22	115	2	97	1.11e-19	89.4
MS.gene40630.t1	MTR_1g035460	37.500	120	68	2	22	141	2	114	3.05e-19	89.4
MS.gene40630.t1	MTR_1g035460	36.585	123	71	3	283	405	187	302	4.56e-19	89.0
MS.gene40630.t1	MTR_3g005495	38.235	102	63	0	3	104	240	341	4.82e-19	89.4
MS.gene40630.t1	MTR_3g005495	36.957	92	58	0	21	112	28	119	5.92e-16	80.1
MS.gene40630.t1	MTR_3g005460	36.364	110	70	0	3	112	22	131	4.95e-19	89.7
MS.gene40630.t1	MTR_3g005460	36.893	103	64	1	3	104	259	361	4.36e-17	83.6
MS.gene40630.t1	MTR_1g021270	25.000	396	234	13	4	392	14	353	5.17e-19	89.7
MS.gene40630.t1	MTR_3g061340	32.857	140	74	3	6	144	12	132	5.43e-19	87.0
MS.gene40630.t1	MTR_1g021440	27.525	396	212	15	11	392	27	361	2.27e-18	86.7
MS.gene40630.t1	MTR_5g044670	35.507	138	88	1	3	139	13	150	3.36e-18	85.5
MS.gene40630.t1	MTR_1g108780	37.405	131	74	4	270	399	178	301	4.66e-18	86.3
MS.gene40630.t1	MTR_1g108780	33.058	121	66	1	21	141	12	117	1.76e-16	81.6
MS.gene40630.t1	MTR_3g061370	31.852	135	83	2	3	137	6	131	9.31e-18	83.6
MS.gene40630.t1	MTR_3g005440	38.235	102	63	0	3	104	239	340	3.56e-17	83.6
MS.gene40630.t1	MTR_3g005440	36.559	93	59	0	20	112	34	126	2.41e-14	75.1
MS.gene40630.t1	MTR_7g050640	35.556	90	58	0	6	95	13	102	1.17e-16	76.3
MS.gene40630.t1	MTR_3g005420	33.981	103	67	1	3	104	18	120	1.48e-15	79.0
MS.gene40630.t1	MTR_3g005420	34.848	132	75	4	264	391	361	485	1.44e-14	75.9
MS.gene40630.t1	MTR_3g005420	37.500	72	45	0	3	74	267	338	3.78e-12	68.2
MS.gene40630.t1	MTR_3g005420	36.538	156	74	9	274	417	138	280	1.39e-11	66.6
MS.gene40630.t1	MTR_6g043890	37.500	112	67	2	6	116	15	124	2.74e-14	73.9
MS.gene40630.t1	MTR_1g035570	38.614	101	56	2	4	104	7	101	1.86e-13	72.0
MS.gene40630.t1	MTR_1g035640	37.624	101	57	2	4	104	7	101	2.08e-13	72.0
MS.gene40630.t1	MTR_3g061220	35.644	101	50	2	6	106	12	97	2.39e-13	66.6
MS.gene40630.t1	MTR_1g021400	38.889	90	55	0	6	95	30	119	1.28e-12	69.3
MS.gene40630.t1	MTR_1g021380	41.176	85	50	0	11	95	26	110	1.29e-12	68.9
MS.gene40630.t1	MTR_1g021350	38.636	88	54	0	9	96	24	111	1.62e-12	68.9
MS.gene40630.t1	MTR_1g021440	40.000	85	51	0	11	95	27	111	3.57e-12	67.4
MS.gene40630.t1	MTR_1g021440	40.000	85	51	0	11	95	27	111	4.24e-12	67.0
MS.gene40630.t1	MTR_1g021320	39.535	86	51	1	10	95	187	271	4.93e-12	68.6
MS.gene40630.t1	MTR_1g021320	37.778	90	56	0	6	95	25	114	3.66e-11	65.9
MS.gene40630.t1	MTR_1g021360	41.026	78	46	0	18	95	194	271	1.16e-11	66.6
MS.gene40630.t1	MTR_1g021360	37.778	90	55	1	6	95	26	114	2.19e-11	65.9
MS.gene40630.t1	MTR_1g021410	38.889	90	54	1	7	95	22	111	3.28e-11	64.7
MS.gene40630.t1	MTR_1g035500	32.143	140	90	3	6	145	25	159	8.00e-11	61.2
MS.gene40630.t1	MTR_1g050845	37.374	99	60	1	6	104	9	105	9.07e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40630.t1	AT3G18990	50.382	393	139	7	1	391	1	339	5.93e-126	368
MS.gene40630.t1	AT3G18990	50.125	399	140	8	1	394	1	345	1.21e-124	366
MS.gene40630.t1	AT1G49480	63.483	178	57	3	216	391	53	224	2.22e-72	227
MS.gene40630.t1	AT1G49480	63.483	178	57	3	216	391	53	224	2.22e-72	227
MS.gene40630.t1	AT1G49480	63.483	178	57	3	216	391	53	224	2.22e-72	227
MS.gene40630.t1	AT4G01580	39.806	103	62	0	2	104	26	128	3.12e-21	91.3
MS.gene40630.t1	AT3G18960	37.864	103	64	0	2	104	26	128	2.07e-20	89.0
MS.gene40630.t1	AT3G18960	37.864	103	64	0	2	104	26	128	2.15e-20	89.4
MS.gene40630.t1	AT1G49475	33.803	142	87	3	2	137	27	167	5.39e-18	82.0
MS.gene40630.t1	AT3G18960	34.524	84	55	0	21	104	8	91	1.30e-13	69.3
MS.gene40630.t1	AT2G16210	34.314	102	62	4	5	102	18	118	8.18e-11	62.0

Find 97 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTCTACCGAGTTGGCATTTC+TGG	0.137922	4.1:+33729340	None:intergenic
AAAAGGTAGACAACAAATTT+TGG	0.211575	4.1:-33729760	MS.gene40630:CDS
AAGAACTTGAATGGCGTTTC+AGG	0.211639	4.1:-33728787	MS.gene40630:CDS
GCACTGCAGAATCTGTTTAA+TGG	0.280689	4.1:-33729410	MS.gene40630:CDS
ACGACCCTCCTATTTATATA+GGG	0.302805	4.1:-33728929	MS.gene40630:CDS
CTAAACTTAATAGCATAAAC+TGG	0.308905	4.1:-33729385	MS.gene40630:CDS
TAAACTCAACTACATTAAAC+TGG	0.334276	4.1:+33729291	None:intergenic
AGTAATGAAGCGTCTCTCTT+TGG	0.337462	4.1:-33729587	MS.gene40630:CDS
TTTCGCTGGAGAACAATTTA+GGG	0.350563	4.1:-33728669	MS.gene40630:CDS
CATGTTCAGAAGGAGGTTCC+TGG	0.372328	4.1:+33729091	None:intergenic
TACGACCCTCCTATTTATAT+AGG	0.394690	4.1:-33728930	MS.gene40630:CDS
CAACAAGTATCCAGTACTAA+TGG	0.397395	4.1:+33729700	None:intergenic
TAGCTCTACCACCTCTATAA+AGG	0.406566	4.1:+33728716	None:intergenic
GCAGAACCAACATGTGAAAC+TGG	0.412096	4.1:-33728536	MS.gene40630:CDS
GACCTATATCTCTGGTCAAC+TGG	0.412834	4.1:+33729315	None:intergenic
CATTAGTACTGGATACTTGT+TGG	0.415047	4.1:-33729699	MS.gene40630:CDS
TGGTTCTGCTGCAACGGCTG+TGG	0.421147	4.1:+33728550	None:intergenic
TTGCAAAACAAAGCAGTTAC+CGG	0.427667	4.1:-33729476	MS.gene40630:CDS
TGAAGATTCTGTTGAAATCA+TGG	0.428155	4.1:-33729531	MS.gene40630:CDS
ATGAGGTAGAAATGCGCAAT+AGG	0.433073	4.1:-33729065	MS.gene40630:CDS
TATTTCCTCATAAAATCATC+TGG	0.445116	4.1:+33729851	None:intergenic
GCTGTAAAGAAGAGGAAATC+AGG	0.445746	4.1:-33729209	MS.gene40630:intron
GGTTCTGCTGCAACGGCTGT+GGG	0.447673	4.1:+33728551	None:intergenic
AACCAGTTGACCAGAGATAT+AGG	0.450024	4.1:-33729317	MS.gene40630:CDS
CACTCTTCAAGCTAAGCAAC+TGG	0.450976	4.1:-33731046	MS.gene40630:intron
AACCATCTAATCCTTTCTGT+CGG	0.454042	4.1:-33728960	MS.gene40630:CDS
GTGGCGTGTAGGAATGAAAA+AGG	0.456416	4.1:-33729777	MS.gene40630:CDS
ACCATCTAATCCTTTCTGTC+GGG	0.457399	4.1:-33728959	MS.gene40630:CDS
ATCAAACTTCAAATCTCTGA+TGG	0.460034	4.1:-33728760	MS.gene40630:CDS
ACCCGACAGAAAGGATTAGA+TGG	0.462119	4.1:+33728958	None:intergenic
CCAGTTCGCTGCCTTTATAG+AGG	0.464193	4.1:-33728727	MS.gene40630:CDS
CCTCTATAAAGGCAGCGAAC+TGG	0.468295	4.1:+33728727	None:intergenic
CAAATTCATTCCAGCCATCA+AGG	0.469351	4.1:+33729735	None:intergenic
TTAAACAGATTCTGCAGTGC+TGG	0.470577	4.1:+33729413	None:intergenic
TGGTAGAGCTAAGTTAAGCC+AGG	0.481112	4.1:-33728704	MS.gene40630:CDS
TTGTTGGTATTCAAATATGA+AGG	0.488579	4.1:-33729683	MS.gene40630:CDS
ACATGTTGGTTCTGCTGCAA+CGG	0.490310	4.1:+33728544	None:intergenic
ACACGCCACGCACTGCCATC+AGG	0.495919	4.1:+33729791	None:intergenic
TTTGCAATAGGCTAGGAGTA+AGG	0.503132	4.1:+33729492	None:intergenic
AGAACAAGCTTATGAAATGA+AGG	0.504843	4.1:+33731075	None:intergenic
CGTTTACCAGTTTCACATGT+TGG	0.506129	4.1:+33728530	None:intergenic
TTTGCAGAGAAGAACTTGAA+TGG	0.506953	4.1:-33728796	MS.gene40630:CDS
AGCATAAACTGGGGTGAAGG+TGG	0.512276	4.1:-33729374	MS.gene40630:CDS
CGATGTGTGTGTGTTTGAGC+TGG	0.519261	4.1:-33728641	MS.gene40630:CDS
GCGCGCGGCTACTGATGAAA+AGG	0.522792	4.1:-33729243	MS.gene40630:CDS
GAAGCGAGGTGATGCTGAAA+CGG	0.522835	4.1:+33728505	None:intergenic
ACCTCATCTTCATGTTCAGA+AGG	0.527271	4.1:+33729081	None:intergenic
AAACTGGAGACCTATATCTC+TGG	0.534467	4.1:+33729307	None:intergenic
TGGTGGTGATATTTCTCCAA+TGG	0.535973	4.1:-33729828	MS.gene40630:CDS
TTTCGTATTACAGAGGATGA+AGG	0.541809	4.1:-33728583	MS.gene40630:CDS
TGCTTAGCTTGAAGAGTGGA+GGG	0.543127	4.1:+33731051	None:intergenic
AACGAAGGAAGTAGTGCTGC+AGG	0.550293	4.1:-33728614	MS.gene40630:CDS
CTGGAGAACAATTTAGGGGA+AGG	0.550360	4.1:-33728664	MS.gene40630:CDS
GATGGCAGTGCGTGGCGTGT+AGG	0.551984	4.1:-33729788	MS.gene40630:CDS
AGTAAGTTTATCAGCTGAGC+CGG	0.556292	4.1:+33729457	None:intergenic
AGGCTAGGAGTAAGGTTCGT+AGG	0.558211	4.1:+33729500	None:intergenic
AATAGCATAAACTGGGGTGA+AGG	0.559689	4.1:-33729377	MS.gene40630:CDS
GCGAAAACTCATACCACCCC+TGG	0.559736	4.1:+33728686	None:intergenic
TTCTTCTCTGCAAAGCAAGA+TGG	0.561035	4.1:+33728805	None:intergenic
CAACTGGTTGTCTACCGAGT+TGG	0.563166	4.1:+33729331	None:intergenic
TGCAACGGCTGTGGGCTCAA+CGG	0.564438	4.1:+33728559	None:intergenic
CGACCCTCCTATTTATATAG+GGG	0.565038	4.1:-33728928	MS.gene40630:CDS
GGTAGAGCTAAGTTAAGCCA+GGG	0.566840	4.1:-33728703	MS.gene40630:CDS
CGTAGGACAACCCGACAGAA+AGG	0.567258	4.1:+33728949	None:intergenic
TGATAGTTAATCTCAGATGT+AGG	0.567814	4.1:+33729626	None:intergenic
TTGCTTAGCTTGAAGAGTGG+AGG	0.568784	4.1:+33731050	None:intergenic
AGAAAACTGCTGTAAAGAAG+AGG	0.569808	4.1:-33729217	MS.gene40630:CDS
AGATTCTGCAGTGCTGGAGG+CGG	0.572818	4.1:+33729419	None:intergenic
AGCTTATGAAATGAAGGAGA+AGG	0.572983	4.1:+33731081	None:intergenic
TCCTTCCAGAAATGCCAACT+CGG	0.578453	4.1:-33729345	MS.gene40630:CDS
ACCGAGTTGGCATTTCTGGA+AGG	0.582778	4.1:+33729344	None:intergenic
TAAACTTAATAGCATAAACT+GGG	0.585444	4.1:-33729384	MS.gene40630:CDS
TATATAAATAGGAGGGTCGT+AGG	0.588497	4.1:+33728932	None:intergenic
GCTTCATTACTTCTTTGCGC+AGG	0.592136	4.1:+33729599	None:intergenic
GTTCGCTGCCTTTATAGAGG+TGG	0.593487	4.1:-33728724	MS.gene40630:CDS
TCAAACTTCAAATCTCTGAT+GGG	0.594893	4.1:-33728759	MS.gene40630:CDS
TCCTTCTGAACATGAAGATG+AGG	0.595862	4.1:-33729082	MS.gene40630:CDS
GGAACTTTGAGAGTAACCAT+TGG	0.597271	4.1:+33729812	None:intergenic
AACAGCTGAAGAAAGAGAGA+AGG	0.598211	4.1:-33729007	MS.gene40630:CDS
CAGTTGCTTAGCTTGAAGAG+TGG	0.602007	4.1:+33731047	None:intergenic
TCATCTTCATGTTCAGAAGG+AGG	0.602398	4.1:+33729084	None:intergenic
AACAGATTCTGCAGTGCTGG+AGG	0.607091	4.1:+33729416	None:intergenic
GCATAAACTGGGGTGAAGGT+GGG	0.609417	4.1:-33729373	MS.gene40630:CDS
GTTTGAGCTGGTTGCAACGA+AGG	0.613778	4.1:-33728629	MS.gene40630:CDS
TTCGCTGGAGAACAATTTAG+GGG	0.616292	4.1:-33728668	MS.gene40630:CDS
GGAGGCGGACGAGACTTGCA+AGG	0.616432	4.1:+33729434	None:intergenic
TACTGTATTTCGTATTACAG+AGG	0.616530	4.1:-33728590	MS.gene40630:CDS
TAATCAGTTTAGTTGAAGCG+AGG	0.620183	4.1:+33728491	None:intergenic
TTTATGAAAGTGCATCCGCA+AGG	0.624536	4.1:-33729041	MS.gene40630:CDS
AAGTTCCTGATGGCAGTGCG+TGG	0.628489	4.1:-33729796	MS.gene40630:CDS
GTTACTCTCAAAGTTCCTGA+TGG	0.635054	4.1:-33729806	MS.gene40630:CDS
AAATCTCTGATGGGAGACAG+TGG	0.637373	4.1:-33728750	MS.gene40630:CDS
GAGCTAAGTTAAGCCAGGGG+TGG	0.681213	4.1:-33728699	MS.gene40630:CDS
GACCCTCCTATTTATATAGG+GGG	0.685460	4.1:-33728927	MS.gene40630:CDS
TGAAGAGTTGAAGTTGCGCG+CGG	0.706550	4.1:-33729258	MS.gene40630:CDS
GTAGAGCTAAGTTAAGCCAG+GGG	0.733227	4.1:-33728702	MS.gene40630:CDS
AAACTTAATAGCATAAACTG+GGG	0.737966	4.1:-33729383	MS.gene40630:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTTATTTATTTTTGTAGT+GGG	-	chr4.1:33728623-33728642	MS.gene40630:CDS	10.0%
!!!	TCGATTTTTTTTTTTTTAAA+TGG	-	chr4.1:33729179-33729198	MS.gene40630:intron	10.0%
!!!	TTATTTATTTATTTTTGTAG+TGG	-	chr4.1:33728622-33728641	MS.gene40630:CDS	10.0%
!!!	TTTAAATTTTTAGATTAGAT+GGG	-	chr4.1:33728758-33728777	MS.gene40630:CDS	10.0%
!!	AAAAAAAAAAAAATCGAACT+CGG	+	chr4.1:33729176-33729195	None:intergenic	15.0%
!!	AAAAATTTAAACTTGATGAA+AGG	+	chr4.1:33728749-33728768	None:intergenic	15.0%
!!	AAAATTTAAACTTGATGAAA+GGG	+	chr4.1:33728748-33728767	None:intergenic	15.0%
!!	ATATAATTAATAGTGTACTT+TGG	-	chr4.1:33729050-33729069	MS.gene40630:CDS	15.0%
!!!	AAAAGAGTCATAAATATTTT+TGG	-	chr4.1:33728790-33728809	MS.gene40630:CDS	15.0%
!!!	AAAGAGTCATAAATATTTTT+GGG	-	chr4.1:33728791-33728810	MS.gene40630:CDS	15.0%
!!!	ATCTTTTGTGTATTATTTTT+TGG	-	chr4.1:33728560-33728579	MS.gene40630:CDS	15.0%
!!!	GTTTAAATTTTTAGATTAGA+TGG	-	chr4.1:33728757-33728776	MS.gene40630:CDS	15.0%
!!	AAAAAAAAAAAATCGAACTC+GGG	+	chr4.1:33729175-33729194	None:intergenic	20.0%
!!	ACATTGAAATAGTTTAAATC+AGG	-	chr4.1:33729145-33729164	MS.gene40630:intron	20.0%
!!	CTTAGTTATTGTTTATAACT+CGG	-	chr4.1:33730382-33730401	MS.gene40630:intron	20.0%
!!	GATAAATTCGAAAAAGATAT+AGG	+	chr4.1:33729463-33729482	None:intergenic	20.0%
!!	TAAACTTAATAGCATAAACT+GGG	-	chr4.1:33730183-33730202	MS.gene40630:intron	20.0%
!!	TTAAAGTCAAATCATAAAGT+GGG	-	chr4.1:33728842-33728861	MS.gene40630:intron	20.0%
!!!	AAAATCCTTTTTTTTTTGTG+TGG	+	chr4.1:33728948-33728967	None:intergenic	20.0%
!!!	ACACAAAAGATTGAATTTTT+AGG	+	chr4.1:33728551-33728570	None:intergenic	20.0%
!!!	TACTTGAAATTAGAGTTTTT+TGG	-	chr4.1:33728972-33728991	MS.gene40630:CDS	20.0%
!!!	TTTAAAGTCAAATCATAAAG+TGG	-	chr4.1:33728841-33728860	MS.gene40630:intron	20.0%
!	AAACTTAATAGCATAAACTG+GGG	-	chr4.1:33730184-33730203	MS.gene40630:intron	25.0%
!	ATTCTCCACACAAAAAAAAA+AGG	-	chr4.1:33728940-33728959	MS.gene40630:CDS	25.0%
!	CAAAAATATTCCATTAGTAC+TGG	-	chr4.1:33729857-33729876	MS.gene40630:CDS	25.0%
!	CATGGCAATTTACAAATATT+TGG	-	chr4.1:33729661-33729680	MS.gene40630:CDS	25.0%
!	CTAAACTTAATAGCATAAAC+TGG	-	chr4.1:33730182-33730201	MS.gene40630:intron	25.0%
!	GAATGAAAAAAAAGTTGTGT+TGG	+	chr4.1:33730689-33730708	None:intergenic	25.0%
!	TAAACTCAACTACATTAAAC+TGG	+	chr4.1:33730279-33730298	None:intergenic	25.0%
!	TAAAGTCAAATCATAAAGTG+GGG	-	chr4.1:33728843-33728862	MS.gene40630:intron	25.0%
!	TATTTCCTCATAAAATCATC+TGG	+	chr4.1:33729719-33729738	None:intergenic	25.0%
!	TGCAATTCACAAATCATATT+AGG	+	chr4.1:33729689-33729708	None:intergenic	25.0%
!	TTGAAATAGTTTAAATCAGG+AGG	-	chr4.1:33729148-33729167	MS.gene40630:intron	25.0%
!	TTGTTGGTATTCAAATATGA+AGG	-	chr4.1:33729884-33729903	MS.gene40630:intron	25.0%
!!	AAAAGATATAGGTTTAGTTC+AGG	+	chr4.1:33729452-33729471	None:intergenic	25.0%
!!	AAAAGGTAGACAACAAATTT+TGG	-	chr4.1:33729807-33729826	MS.gene40630:CDS	25.0%
!!	GATGATTTTATGAGGAAATA+TGG	-	chr4.1:33729719-33729738	MS.gene40630:CDS	25.0%
!!	TCTTACTATTTTCGAAGAAA+TGG	-	chr4.1:33730009-33730028	MS.gene40630:intron	25.0%
!!	TTCTTAGATGAATTTTTGCA+TGG	-	chr4.1:33728598-33728617	MS.gene40630:CDS	25.0%
!!!	AAAGGGTTTGATAATTTTTC+TGG	-	chr4.1:33728672-33728691	MS.gene40630:CDS	25.0%
!!!	AAGGGTTTGATAATTTTTCT+GGG	-	chr4.1:33728673-33728692	MS.gene40630:CDS	25.0%
!!!	AATTTTGATAGAGTGAAGAA+AGG	-	chr4.1:33728654-33728673	MS.gene40630:CDS	25.0%
!!!	ATTTTGATAGAGTGAAGAAA+GGG	-	chr4.1:33728655-33728674	MS.gene40630:CDS	25.0%
!!!	TCATAAATATTTTTGGGTCA+AGG	-	chr4.1:33728797-33728816	MS.gene40630:CDS	25.0%
!!!	TGGTGTTTTTTATACTATCA+TGG	-	chr4.1:33729643-33729662	MS.gene40630:CDS	25.0%
!!!	TTGCACTTTTTGAAATGAAA+TGG	-	chr4.1:33729623-33729642	MS.gene40630:CDS	25.0%
	AATATATGTGTGTTGCATGT+TGG	+	chr4.1:33728892-33728911	None:intergenic	30.0%
	AGAACAAGCTTATGAAATGA+AGG	+	chr4.1:33728495-33728514	None:intergenic	30.0%
	AGCATATGTTAGTAAATTGC+TGG	+	chr4.1:33729367-33729386	None:intergenic	30.0%
	ATCAAACTTCAAATCTCTGA+TGG	-	chr4.1:33730807-33730826	MS.gene40630:intron	30.0%
	TACTGTATTTCGTATTACAG+AGG	-	chr4.1:33730977-33730996	MS.gene40630:intron	30.0%
	TCAAACTTCAAATCTCTGAT+GGG	-	chr4.1:33730808-33730827	MS.gene40630:intron	30.0%
	TGAAGATTCTGTTGAAATCA+TGG	-	chr4.1:33730036-33730055	MS.gene40630:intron	30.0%
	TGATAGTTAATCTCAGATGT+AGG	+	chr4.1:33729944-33729963	None:intergenic	30.0%
	TTGTAATAAGTTCGTCGAAT+CGG	+	chr4.1:33729596-33729615	None:intergenic	30.0%
!	AATTGTTTCTCACTGTAACT+CGG	+	chr4.1:33729409-33729428	None:intergenic	30.0%
!	ATATGATTTGTGAATTGCAG+AGG	-	chr4.1:33729690-33729709	MS.gene40630:CDS	30.0%
!	GATTTTATGAGGAAATATGG+TGG	-	chr4.1:33729722-33729741	MS.gene40630:CDS	30.0%
!	TTTTACTGGTGGAATTTTTG+AGG	-	chr4.1:33729010-33729029	MS.gene40630:CDS	30.0%
!!	AAATGATTTTGCAGCATTGA+TGG	+	chr4.1:33730586-33730605	None:intergenic	30.0%
!!!	AACAAATTTTGGTTCCTTGA+TGG	-	chr4.1:33729818-33729837	MS.gene40630:CDS	30.0%
!!!	TAACTGCTTTGTTTTGCAAT+AGG	+	chr4.1:33730090-33730109	None:intergenic	30.0%
!!!	TTTCGTGGGTTTGTTTTTAT+CGG	+	chr4.1:33729308-33729327	None:intergenic	30.0%
	AACCATCTAATCCTTTCTGT+CGG	-	chr4.1:33730607-33730626	MS.gene40630:intron	35.0%
	ACGACCCTCCTATTTATATA+GGG	-	chr4.1:33730638-33730657	MS.gene40630:intron	35.0%
	AGAAAACTGCTGTAAAGAAG+AGG	-	chr4.1:33730350-33730369	MS.gene40630:intron	35.0%
	AGCTTATGAAATGAAGGAGA+AGG	+	chr4.1:33728489-33728508	None:intergenic	35.0%
	CAACAAGTATCCAGTACTAA+TGG	+	chr4.1:33729870-33729889	None:intergenic	35.0%
	GAAAGGGAAACAATACAACA+AGG	-	chr4.1:33729255-33729274	MS.gene40630:CDS	35.0%
	TAATCAGTTTAGTTGAAGCG+AGG	+	chr4.1:33731079-33731098	None:intergenic	35.0%
	TACGACCCTCCTATTTATAT+AGG	-	chr4.1:33730637-33730656	MS.gene40630:intron	35.0%
	TATATAAATAGGAGGGTCGT+AGG	+	chr4.1:33730638-33730657	None:intergenic	35.0%
	TATGCACCCCCTATATAAAT+AGG	+	chr4.1:33730649-33730668	None:intergenic	35.0%
	TTACCCATCGATACCTTATT+TGG	+	chr4.1:33729333-33729352	None:intergenic	35.0%
	TTGCAAAACAAAGCAGTTAC+CGG	-	chr4.1:33730091-33730110	MS.gene40630:intron	35.0%
	TTTCGCTGGAGAACAATTTA+GGG	-	chr4.1:33730898-33730917	MS.gene40630:intron	35.0%
	TTTCGTATTACAGAGGATGA+AGG	-	chr4.1:33730984-33731003	MS.gene40630:intron	35.0%
	TTTGCAGAGAAGAACTTGAA+TGG	-	chr4.1:33730771-33730790	MS.gene40630:intron	35.0%
!	CATTAGTACTGGATACTTGT+TGG	-	chr4.1:33729868-33729887	MS.gene40630:intron	35.0%
!	TACCCATCGATACCTTATTT+GGG	+	chr4.1:33729332-33729351	None:intergenic	35.0%
!	TTTATATAGGGGGTGCATAA+TGG	-	chr4.1:33730650-33730669	MS.gene40630:intron	35.0%
!	TTTTCGCTGGAGAACAATTT+AGG	-	chr4.1:33730897-33730916	MS.gene40630:intron	35.0%
!!	AAACCCAAATAAGGTATCGA+TGG	-	chr4.1:33729326-33729345	MS.gene40630:CDS	35.0%
!!	AACCCAAATAAGGTATCGAT+GGG	-	chr4.1:33729327-33729346	MS.gene40630:CDS	35.0%
!!	AAGTTCCGTGATTCTGAAAT+TGG	-	chr4.1:33729553-33729572	MS.gene40630:CDS	35.0%
!!	ATACCTTATTTGGGTTTTCG+TGG	+	chr4.1:33729323-33729342	None:intergenic	35.0%
!!	ATTTTTAGATTAGATGGGCG+TGG	-	chr4.1:33728763-33728782	MS.gene40630:CDS	35.0%
!!	TACCTTATTTGGGTTTTCGT+GGG	+	chr4.1:33729322-33729341	None:intergenic	35.0%
!!!	AGAGTTTTTTGGATGACTGA+TGG	-	chr4.1:33728983-33729002	MS.gene40630:CDS	35.0%
!!!	GAGTTTTTTGGATGACTGAT+GGG	-	chr4.1:33728984-33729003	MS.gene40630:CDS	35.0%
!!!	TTCGTGGGTTTGTTTTTATC+GGG	+	chr4.1:33729307-33729326	None:intergenic	35.0%
	AAAAAACTCGTGGCAACGAA+AGG	-	chr4.1:33729238-33729257	MS.gene40630:CDS	40.0%
	AAAAACTCGTGGCAACGAAA+GGG	-	chr4.1:33729239-33729258	MS.gene40630:CDS	40.0%
	AAACAATTCCCATGCATTGG+AGG	-	chr4.1:33729421-33729440	MS.gene40630:CDS	40.0%
	AAACTGGAGACCTATATCTC+TGG	+	chr4.1:33730263-33730282	None:intergenic	40.0%
	AACAGCTGAAGAAAGAGAGA+AGG	-	chr4.1:33730560-33730579	MS.gene40630:intron	40.0%
	AACCAGTTGACCAGAGATAT+AGG	-	chr4.1:33730250-33730269	MS.gene40630:intron	40.0%
	AACCCACGAAAACCCAAATA+AGG	-	chr4.1:33729317-33729336	MS.gene40630:CDS	40.0%
	AAGAACTTGAATGGCGTTTC+AGG	-	chr4.1:33730780-33730799	MS.gene40630:intron	40.0%
	AATAGCATAAACTGGGGTGA+AGG	-	chr4.1:33730190-33730209	MS.gene40630:intron	40.0%
	ACCATCTAATCCTTTCTGTC+GGG	-	chr4.1:33730608-33730627	MS.gene40630:intron	40.0%
	ACCTCATCTTCATGTTCAGA+AGG	+	chr4.1:33730489-33730508	None:intergenic	40.0%
	ACTTGATGAAAGGGATGACA+AGG	+	chr4.1:33728739-33728758	None:intergenic	40.0%
	AGTAAGTTTATCAGCTGAGC+CGG	+	chr4.1:33730113-33730132	None:intergenic	40.0%
	ATAAGTTCGTCGAATCGGTT+TGG	+	chr4.1:33729591-33729610	None:intergenic	40.0%
	ATGAGGTAGAAATGCGCAAT+AGG	-	chr4.1:33730502-33730521	MS.gene40630:intron	40.0%
	CAAAGCAAGATGGTAGATAC+TGG	+	chr4.1:33730755-33730774	None:intergenic	40.0%
	CAAATTCATTCCAGCCATCA+AGG	+	chr4.1:33729835-33729854	None:intergenic	40.0%
	CACCCCCTATATAAATAGGA+GGG	+	chr4.1:33730645-33730664	None:intergenic	40.0%
	CGACCCTCCTATTTATATAG+GGG	-	chr4.1:33730639-33730658	MS.gene40630:intron	40.0%
	CGTTTACCAGTTTCACATGT+TGG	+	chr4.1:33731040-33731059	None:intergenic	40.0%
	GACCCTCCTATTTATATAGG+GGG	-	chr4.1:33730640-33730659	MS.gene40630:intron	40.0%
	GAGAAACAATTCCCATGCAT+TGG	-	chr4.1:33729418-33729437	MS.gene40630:CDS	40.0%
	GCACTGCAGAATCTGTTTAA+TGG	-	chr4.1:33730157-33730176	MS.gene40630:intron	40.0%
	GCTGTAAAGAAGAGGAAATC+AGG	-	chr4.1:33730358-33730377	MS.gene40630:intron	40.0%
	GCTTGAGTGTTTGTGTGTTA+CGG	-	chr4.1:33729519-33729538	MS.gene40630:CDS	40.0%
	GTCAAATCATAAAGTGGGGT+TGG	-	chr4.1:33728847-33728866	MS.gene40630:intron	40.0%
	GTGTGTTGCATGTTGGAAAT+AGG	+	chr4.1:33728885-33728904	None:intergenic	40.0%
	GTTACTCTCAAAGTTCCTGA+TGG	-	chr4.1:33729761-33729780	MS.gene40630:CDS	40.0%
	GTTGTAACATGAAGGTAGCT+CGG	-	chr4.1:33729107-33729126	MS.gene40630:intron	40.0%
	TCATCTTCATGTTCAGAAGG+AGG	+	chr4.1:33730486-33730505	None:intergenic	40.0%
	TCCTTCTGAACATGAAGATG+AGG	-	chr4.1:33730485-33730504	MS.gene40630:intron	40.0%
	TGTGCTAGGTTGTAACATGA+AGG	-	chr4.1:33729099-33729118	MS.gene40630:intron	40.0%
	TTAAACAGATTCTGCAGTGC+TGG	+	chr4.1:33730157-33730176	None:intergenic	40.0%
	TTCGCTGGAGAACAATTTAG+GGG	-	chr4.1:33730899-33730918	MS.gene40630:intron	40.0%
	TTCTTCTCTGCAAAGCAAGA+TGG	+	chr4.1:33730765-33730784	None:intergenic	40.0%
	TTTGCAATAGGCTAGGAGTA+AGG	+	chr4.1:33730078-33730097	None:intergenic	40.0%
!	AGTAATGAAGCGTCTCTCTT+TGG	-	chr4.1:33729980-33729999	MS.gene40630:intron	40.0%
!	CAAGGTCTCAAGATTAGTCA+TGG	-	chr4.1:33728815-33728834	MS.gene40630:intron	40.0%
!	GGAACTTTGAGAGTAACCAT+TGG	+	chr4.1:33729758-33729777	None:intergenic	40.0%
!	GGAGGTGTAACTTATATAGG+CGG	+	chr4.1:33729283-33729302	None:intergenic	40.0%
!	GGCTTCCAGATGATTTTATG+AGG	-	chr4.1:33729711-33729730	MS.gene40630:CDS	40.0%
!	TAGCTCTACCACCTCTATAA+AGG	+	chr4.1:33730854-33730873	None:intergenic	40.0%
!	TGGTGGTGATATTTCTCCAA+TGG	-	chr4.1:33729739-33729758	MS.gene40630:CDS	40.0%
!	TGTTGCAGTTCTTTTCCTTG+CGG	+	chr4.1:33730544-33730563	None:intergenic	40.0%
!	TTTATGAAAGTGCATCCGCA+AGG	-	chr4.1:33730526-33730545	MS.gene40630:intron	40.0%
!!	TTTTGAAAGTGCAGATGTCC+AGG	-	chr4.1:33730458-33730477	MS.gene40630:intron	40.0%
!!!	AATTTTGGTTCCTTGATGGC+TGG	-	chr4.1:33729822-33729841	MS.gene40630:CDS	40.0%
!!!	GCTTTGTTTTGCAATAGGCT+AGG	+	chr4.1:33730085-33730104	None:intergenic	40.0%
!!!	TGACTGATGGGTTGTTTTAC+TGG	-	chr4.1:33728996-33729015	MS.gene40630:CDS	40.0%
	AAATCTCTGATGGGAGACAG+TGG	-	chr4.1:33730817-33730836	MS.gene40630:intron	45.0%
	ACCCGACAGAAAGGATTAGA+TGG	+	chr4.1:33730612-33730631	None:intergenic	45.0%
	CAAGACGCACAAAAAACTCG+TGG	-	chr4.1:33729228-33729247	MS.gene40630:CDS	45.0%
	CACTCTTCAAGCTAAGCAAC+TGG	-	chr4.1:33728521-33728540	MS.gene40630:CDS	45.0%
	CTCTGTATGAAGCATGTGCT+AGG	-	chr4.1:33729085-33729104	MS.gene40630:CDS	45.0%
	CTGGAGAACAATTTAGGGGA+AGG	-	chr4.1:33730903-33730922	MS.gene40630:intron	45.0%
	GAAAGGGATGACAAGGTTTG+AGG	+	chr4.1:33728732-33728751	None:intergenic	45.0%
	GACCTATATCTCTGGTCAAC+TGG	+	chr4.1:33730255-33730274	None:intergenic	45.0%
	GCACCCCCTATATAAATAGG+AGG	+	chr4.1:33730646-33730665	None:intergenic	45.0%
	GCAGAACCAACATGTGAAAC+TGG	-	chr4.1:33731031-33731050	MS.gene40630:intron	45.0%
	GCTTCATTACTTCTTTGCGC+AGG	+	chr4.1:33729971-33729990	None:intergenic	45.0%
	GGCAGCCAATTTCAGAATCA+CGG	+	chr4.1:33729561-33729580	None:intergenic	45.0%
	GGTAGAGCTAAGTTAAGCCA+GGG	-	chr4.1:33730864-33730883	MS.gene40630:intron	45.0%
	GTAGAGCTAAGTTAAGCCAG+GGG	-	chr4.1:33730865-33730884	MS.gene40630:intron	45.0%
	GTGGCGTGTAGGAATGAAAA+AGG	-	chr4.1:33729790-33729809	MS.gene40630:CDS	45.0%
	TAACATGAAGGTAGCTCGGT+TGG	-	chr4.1:33729111-33729130	MS.gene40630:intron	45.0%
	TCCTTCCAGAAATGCCAACT+CGG	-	chr4.1:33730222-33730241	MS.gene40630:intron	45.0%
	TGGTAGAGCTAAGTTAAGCC+AGG	-	chr4.1:33730863-33730882	MS.gene40630:intron	45.0%
!	CAGTTGCTTAGCTTGAAGAG+TGG	+	chr4.1:33728523-33728542	None:intergenic	45.0%
!	GATGACAAGGTTTGAGGTTG+TGG	+	chr4.1:33728726-33728745	None:intergenic	45.0%
!	GGCGGAGGTGTAACTTATAT+AGG	+	chr4.1:33729286-33729305	None:intergenic	45.0%
!	GGTTTGAGGTTGTGGATGAT+TGG	+	chr4.1:33728718-33728737	None:intergenic	45.0%
!	TGCTTAGCTTGAAGAGTGGA+GGG	+	chr4.1:33728519-33728538	None:intergenic	45.0%
!	TTGCTTAGCTTGAAGAGTGG+AGG	+	chr4.1:33728520-33728539	None:intergenic	45.0%
!!	ACATGTTGGTTCTGCTGCAA+CGG	+	chr4.1:33731026-33731045	None:intergenic	45.0%
!!	TAGCTCGGTTGGTGAGTTAA+GGG	-	chr4.1:33729122-33729141	MS.gene40630:intron	45.0%
!!	TCGAATCGGTTTGGCAAGAT+TGG	+	chr4.1:33729582-33729601	None:intergenic	45.0%
!!!	CTGATGGGTTGTTTTACTGG+TGG	-	chr4.1:33728999-33729018	MS.gene40630:CDS	45.0%
!!!	GTGGGTTTGTTTTTATCGGG+CGG	+	chr4.1:33729304-33729323	None:intergenic	45.0%
	AACGAAGGAAGTAGTGCTGC+AGG	-	chr4.1:33730953-33730972	MS.gene40630:intron	50.0%
	AGCATAAACTGGGGTGAAGG+TGG	-	chr4.1:33730193-33730212	MS.gene40630:intron	50.0%
	AGGCTAGGAGTAAGGTTCGT+AGG	+	chr4.1:33730070-33730089	None:intergenic	50.0%
	AGGTTCCTCCTCCAATGCAT+GGG	+	chr4.1:33729432-33729451	None:intergenic	50.0%
	CAACTGGTTGTCTACCGAGT+TGG	+	chr4.1:33730239-33730258	None:intergenic	50.0%
	CAATTCCCATGCATTGGAGG+AGG	-	chr4.1:33729424-33729443	MS.gene40630:CDS	50.0%
	CATGTTCAGAAGGAGGTTCC+TGG	+	chr4.1:33730479-33730498	None:intergenic	50.0%
	CCAGTTCGCTGCCTTTATAG+AGG	-	chr4.1:33730840-33730859	MS.gene40630:intron	50.0%
	CCTCTATAAAGGCAGCGAAC+TGG	+	chr4.1:33730843-33730862	None:intergenic	50.0%
	CGATGTGTGTGTGTTTGAGC+TGG	-	chr4.1:33730926-33730945	MS.gene40630:intron	50.0%
	GAAGCGAGGTGATGCTGAAA+CGG	+	chr4.1:33731065-33731084	None:intergenic	50.0%
	GCATAAACTGGGGTGAAGGT+GGG	-	chr4.1:33730194-33730213	MS.gene40630:intron	50.0%
	GTTCGCTGCCTTTATAGAGG+TGG	-	chr4.1:33730843-33730862	MS.gene40630:intron	50.0%
	GTTTGAGCTGGTTGCAACGA+AGG	-	chr4.1:33730938-33730957	MS.gene40630:intron	50.0%
	TGAAGAGTTGAAGTTGCGCG+CGG	-	chr4.1:33730309-33730328	MS.gene40630:intron	50.0%
!	AACAGATTCTGCAGTGCTGG+AGG	+	chr4.1:33730154-33730173	None:intergenic	50.0%
!	ACCGAGTTGGCATTTCTGGA+AGG	+	chr4.1:33730226-33730245	None:intergenic	50.0%
!	GTCTACCGAGTTGGCATTTC+TGG	+	chr4.1:33730230-33730249	None:intergenic	50.0%
!!	GTAGCTCGGTTGGTGAGTTA+AGG	-	chr4.1:33729121-33729140	MS.gene40630:intron	50.0%
!!!	GGTTTGTTTTTATCGGGCGG+AGG	+	chr4.1:33729301-33729320	None:intergenic	50.0%
	AAGTTCCTGATGGCAGTGCG+TGG	-	chr4.1:33729771-33729790	MS.gene40630:CDS	55.0%
	CAGGTTCCTCCTCCAATGCA+TGG	+	chr4.1:33729433-33729452	None:intergenic	55.0%
	CGTAGGACAACCCGACAGAA+AGG	+	chr4.1:33730621-33730640	None:intergenic	55.0%
	GAGCTAAGTTAAGCCAGGGG+TGG	-	chr4.1:33730868-33730887	MS.gene40630:intron	55.0%
	GCGAAAACTCATACCACCCC+TGG	+	chr4.1:33730884-33730903	None:intergenic	55.0%
!	AGATTCTGCAGTGCTGGAGG+CGG	+	chr4.1:33730151-33730170	None:intergenic	55.0%
!	GGGGTGGTATGAGTTTTCGC+TGG	-	chr4.1:33730884-33730903	MS.gene40630:intron	55.0%
	GCGCGCGGCTACTGATGAAA+AGG	-	chr4.1:33730324-33730343	MS.gene40630:intron	60.0%
	GGTTCTGCTGCAACGGCTGT+GGG	+	chr4.1:33731019-33731038	None:intergenic	60.0%
	TGCAACGGCTGTGGGCTCAA+CGG	+	chr4.1:33731011-33731030	None:intergenic	60.0%
!	TGGTTCTGCTGCAACGGCTG+TGG	+	chr4.1:33731020-33731039	None:intergenic	60.0%
	ACACGCCACGCACTGCCATC+AGG	+	chr4.1:33729779-33729798	None:intergenic	65.0%
	GATGGCAGTGCGTGGCGTGT+AGG	-	chr4.1:33729779-33729798	MS.gene40630:CDS	65.0%
	GGAGGCGGACGAGACTTGCA+AGG	+	chr4.1:33730136-33730155	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	33728483	33731106	33728483	ID=MS.gene40630
chr4.1	mRNA	33728483	33731106	33728483	ID=MS.gene40630.t1;Parent=MS.gene40630
chr4.1	exon	33731047	33731106	33731047	ID=MS.gene40630.t1.exon1;Parent=MS.gene40630.t1
chr4.1	CDS	33731047	33731106	33731047	ID=cds.MS.gene40630.t1;Parent=MS.gene40630.t1
chr4.1	exon	33729210	33729879	33729210	ID=MS.gene40630.t1.exon2;Parent=MS.gene40630.t1
chr4.1	CDS	33729210	33729879	33729210	ID=cds.MS.gene40630.t1;Parent=MS.gene40630.t1
chr4.1	exon	33728918	33729117	33728918	ID=MS.gene40630.t1.exon3;Parent=MS.gene40630.t1
chr4.1	CDS	33728918	33729117	33728918	ID=cds.MS.gene40630.t1;Parent=MS.gene40630.t1
chr4.1	exon	33728483	33728833	33728483	ID=MS.gene40630.t1.exon4;Parent=MS.gene40630.t1
chr4.1	CDS	33728483	33728833	33728483	ID=cds.MS.gene40630.t1;Parent=MS.gene40630.t1

Gene Sequence

>MS.gene40630

ATGCCTTCTCCTTCATTTCATAAGCTTGTTCTACCCTCCACTCTTCAAGCTAAGCAACTGGTATACCTAAAAATTCAATCTTTTGTGTATTATTTTTTGGTTTTTTGACTCTATTTTCTTAGATGAATTTTTGCATGGTTTATTTATTTATTTTTGTAGTGGGTTTATGAGAATTTTGATAGAGTGAAGAAAGGGTTTGATAATTTTTCTGGGTTTTTACTTTTTATTTTCACCAATCATCCACAACCTCAAACCTTGTCATCCCTTTCATCAAGTTTAAATTTTTAGATTAGATGGGCGTGGAAAAAAAAGAGTCATAAATATTTTTGGGTCAAGGTCTCAAGATTAGTCATGGACTTTTAAAGTCAAATCATAAAGTGGGGTTGGCTAATTTTATGTCCTATTTCCAACATGCAACACACATATATTTAAGTTTTCTCAAATTTATTAATTGAAAATTCTCCACACAAAAAAAAAAGGATTTTTTTCTACTTGAAATTAGAGTTTTTTGGATGACTGATGGGTTGTTTTACTGGTGGAATTTTTGAGGAAATTTATGCTGAGTAAATATAATTAATAGTGTACTTTGGTTTAGAGATCTACTCTGTATGAAGCATGTGCTAGGTTGTAACATGAAGGTAGCTCGGTTGGTGAGTTAAGGGACATTGAAATAGTTTAAATCAGGAGGTCCCGAGTTCGATTTTTTTTTTTTTAAATGGCTAATTTTATTCTCGACGAGTTTATGCAAGACGCACAAAAAACTCGTGGCAACGAAAGGGAAACAATACAACAAGGTGCCGCCTATATAAGTTACACCTCCGCCCGATAAAAACAAACCCACGAAAACCCAAATAAGGTATCGATGGGTAAAACTAATATAACCAGCAATTTACTAACATATGCTTATAAAAAAAATGCATTAGCCGAGTTACAGTGAGAAACAATTCCCATGCATTGGAGGAGGAACCTGAACTAAACCTATATCTTTTTCGAATTTATCTTTGCAATTAGAATTTTAGCTTTGTTTGTCAGATTAGCTTGAGTGTTTGTGTGTTACGGTGCAATTTATGAAGTTCCGTGATTCTGAAATTGGCTGCCAATCTTGCCAAACCGATTCGACGAACTTATTACAATAGAACATTGCACTTTTTGAAATGAAATGGTGTTTTTTATACTATCATGGCAATTTACAAATATTTGGAACCTAATATGATTTGTGAATTGCAGAGGCTTCCAGATGATTTTATGAGGAAATATGGTGGTGATATTTCTCCAATGGTTACTCTCAAAGTTCCTGATGGCAGTGCGTGGCGTGTAGGAATGAAAAAGGTAGACAACAAATTTTGGTTCCTTGATGGCTGGAATGAATTTGTTCAAAAATATTCCATTAGTACTGGATACTTGTTGGTATTCAAATATGAAGGAAAGTCGTATTTCACTGTTAATATTTTTAGTTTGCCTACATCTGAGATTAACTATCAATCACCTGCGCAAAGAAGTAATGAAGCGTCTCTCTTTGGAAAACGTCTTACTATTTTCGAAGAAATGGAAGATGAAGATTCTGTTGAAATCATGGACTCGTCGCCTACGAACCTTACTCCTAGCCTATTGCAAAACAAAGCAGTTACCGGCTCAGCTGATAAACTTACTCCTTGCAAGTCTCGTCCGCCTCCAGCACTGCAGAATCTGTTTAATGGATCTAAACTTAATAGCATAAACTGGGGTGAAGGTGGGAATACTCCTTCCAGAAATGCCAACTCGGTAGACAACCAGTTGACCAGAGATATAGGTCTCCAGTTTAATGTAGTTGAGTTTAAAAAGTCTAATGAAGAGTTGAAGTTGCGCGCGGCTACTGATGAAAAGGTTAAGAAAACTGCTGTAAAGAAGAGGAAATCAGGTCTTAGTTATTGTTTATAACTCGGTTTTCTTTATCTGATCTCGTTATCTGAATTGAAATTTATAATCAAAATGCTATTTTTGAAAGTGCAGATGTCCAGGAACCTCCTTCTGAACATGAAGATGAGGTAGAAATGCGCAATAGGTTTTATGAAAGTGCATCCGCAAGGAAAAGAACTGCAACAGCTGAAGAAAGAGAGAAGGCCATCAATGCTGCAAAATCATTTGAACCATCTAATCCTTTCTGTCGGGTTGTCCTACGACCCTCCTATTTATATAGGGGGTGCATAATGGTGAATCATTGAATCCAACACAACTTTTTTTTCATTCTCTTATAACATTTTGATCTTGCATGCTAAATTCTTTCTGTTTTCCAGTATCTACCATCTTGCTTTGCAGAGAAGAACTTGAATGGCGTTTCAGGAATTATCAAACTTCAAATCTCTGATGGGAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGTGGTAGAGCTAAGTTAAGCCAGGGGTGGTATGAGTTTTCGCTGGAGAACAATTTAGGGGAAGGCGATGTGTGTGTGTTTGAGCTGGTTGCAACGAAGGAAGTAGTGCTGCAGGTTACTGTATTTCGTATTACAGAGGATGAAGGACCGTTGAGCCCACAGCCGTTGCAGCAGAACCAACATGTGAAACTGGTAAACGTTCCGTTTCAGCATCACCTCGCTTCAACTAAACTGATTAGAAATTAA

Protein sequence

>MS.gene40630.t1

MPSPSFHKLVLPSTLQAKQLRLPDDFMRKYGGDISPMVTLKVPDGSAWRVGMKKVDNKFWFLDGWNEFVQKYSISTGYLLVFKYEGKSYFTVNIFSLPTSEINYQSPAQRSNEASLFGKRLTIFEEMEDEDSVEIMDSSPTNLTPSLLQNKAVTGSADKLTPCKSRPPPALQNLFNGSKLNSINWGEGGNTPSRNANSVDNQLTRDIGLQFNVVEFKKSNEELKLRAATDEKVKKTAVKKRKSDVQEPPSEHEDEVEMRNRFYESASARKRTATAEEREKAINAAKSFEPSNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGIIKLQISDGRQWPVRCLYRGGRAKLSQGWYEFSLENNLGEGDVCVFELVATKEVVLQVTVFRITEDEGPLSPQPLQQNQHVKLVNVPFQHHLASTKLIRN