Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051425.t1 | XP_013468125.1 | 99.5 | 434 | 2 | 0 | 53 | 486 | 53 | 486 | 2.10E-249 | 871.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051425.t1 | O04376 | 84.0 | 419 | 66 | 1 | 60 | 477 | 67 | 485 | 5.8e-208 | 724.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051425.t1 | A0A072VK13 | 99.5 | 434 | 2 | 0 | 53 | 486 | 53 | 486 | 1.5e-249 | 871.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007383 | MS.gene051425 | PPI |
| MS.gene029756 | MS.gene051425 | PPI |
| MS.gene035014 | MS.gene051425 | PPI |
| MS.gene70740 | MS.gene051425 | PPI |
| MS.gene051425 | MS.gene020631 | PPI |
| MS.gene25819 | MS.gene051425 | PPI |
| MS.gene067043 | MS.gene051425 | PPI |
| MS.gene47441 | MS.gene051425 | PPI |
| MS.gene051425 | MS.gene22385 | PPI |
| MS.gene021631 | MS.gene051425 | PPI |
| MS.gene014785 | MS.gene051425 | PPI |
| MS.gene015941 | MS.gene051425 | PPI |
| MS.gene051425 | MS.gene75564 | PPI |
| MS.gene044183 | MS.gene051425 | PPI |
| MS.gene71483 | MS.gene051425 | PPI |
| MS.gene072957 | MS.gene051425 | PPI |
| MS.gene79120 | MS.gene051425 | PPI |
| MS.gene007562 | MS.gene051425 | PPI |
| MS.gene22385 | MS.gene051425 | PPI |
| MS.gene045221 | MS.gene051425 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051425.t1 | MTR_1g062950 | 98.560 | 486 | 7 | 0 | 1 | 486 | 1 | 486 | 0.0 | 996 |
| MS.gene051425.t1 | MTR_1g111570 | 65.844 | 486 | 158 | 4 | 1 | 482 | 1 | 482 | 0.0 | 652 |
| MS.gene051425.t1 | MTR_7g102900 | 81.026 | 390 | 51 | 4 | 1 | 387 | 1 | 370 | 0.0 | 616 |
| MS.gene051425.t1 | MTR_6g022720 | 63.717 | 452 | 159 | 3 | 29 | 476 | 44 | 494 | 0.0 | 603 |
| MS.gene051425.t1 | MTR_3g086010 | 59.746 | 472 | 183 | 3 | 16 | 482 | 37 | 506 | 0.0 | 592 |
| MS.gene051425.t1 | MTR_3g080070 | 65.446 | 437 | 150 | 1 | 40 | 475 | 73 | 509 | 0.0 | 580 |
| MS.gene051425.t1 | MTR_1g011460 | 56.851 | 489 | 194 | 6 | 1 | 480 | 1 | 481 | 0.0 | 547 |
| MS.gene051425.t1 | MTR_3g107980 | 55.052 | 485 | 208 | 4 | 1 | 476 | 1 | 484 | 0.0 | 535 |
| MS.gene051425.t1 | MTR_4g113020 | 54.505 | 444 | 192 | 4 | 49 | 485 | 57 | 497 | 0.0 | 518 |
| MS.gene051425.t1 | MTR_6g022720 | 65.565 | 363 | 120 | 3 | 29 | 387 | 44 | 405 | 1.14e-173 | 494 |
| MS.gene051425.t1 | MTR_4g113020 | 55.952 | 336 | 142 | 3 | 49 | 381 | 57 | 389 | 3.29e-139 | 406 |
| MS.gene051425.t1 | MTR_1g112940 | 42.308 | 416 | 234 | 4 | 66 | 478 | 24 | 436 | 3.42e-122 | 365 |
| MS.gene051425.t1 | MTR_7g102920 | 81.308 | 107 | 19 | 1 | 379 | 485 | 22 | 127 | 1.32e-55 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051425.t1 | AT3G09880 | 78.144 | 485 | 98 | 3 | 1 | 477 | 1 | 485 | 0.0 | 755 |
| MS.gene051425.t1 | AT5G03470 | 72.929 | 495 | 125 | 5 | 1 | 486 | 1 | 495 | 0.0 | 738 |
| MS.gene051425.t1 | AT4G15415 | 62.200 | 500 | 171 | 3 | 1 | 482 | 1 | 500 | 0.0 | 625 |
| MS.gene051425.t1 | AT4G15415 | 62.200 | 500 | 171 | 3 | 1 | 482 | 1 | 500 | 0.0 | 625 |
| MS.gene051425.t1 | AT4G15415 | 62.200 | 500 | 171 | 3 | 1 | 482 | 1 | 500 | 0.0 | 625 |
| MS.gene051425.t1 | AT4G15415 | 62.200 | 500 | 171 | 3 | 1 | 482 | 1 | 500 | 0.0 | 625 |
| MS.gene051425.t1 | AT3G54930 | 63.692 | 493 | 162 | 4 | 1 | 476 | 1 | 493 | 0.0 | 622 |
| MS.gene051425.t1 | AT3G54930 | 63.692 | 493 | 162 | 4 | 1 | 476 | 1 | 493 | 0.0 | 622 |
| MS.gene051425.t1 | AT1G13460 | 63.974 | 458 | 154 | 3 | 24 | 477 | 36 | 486 | 0.0 | 607 |
| MS.gene051425.t1 | AT1G13460 | 63.974 | 458 | 154 | 3 | 24 | 477 | 36 | 486 | 0.0 | 607 |
| MS.gene051425.t1 | AT3G26020 | 63.462 | 468 | 165 | 3 | 18 | 479 | 42 | 509 | 0.0 | 606 |
| MS.gene051425.t1 | AT3G26020 | 63.462 | 468 | 165 | 3 | 18 | 479 | 42 | 509 | 0.0 | 606 |
| MS.gene051425.t1 | AT3G26020 | 63.462 | 468 | 165 | 3 | 18 | 479 | 42 | 509 | 0.0 | 606 |
| MS.gene051425.t1 | AT3G26020 | 63.462 | 468 | 165 | 3 | 18 | 479 | 42 | 509 | 0.0 | 606 |
| MS.gene051425.t1 | AT3G21650 | 63.982 | 447 | 158 | 2 | 38 | 481 | 74 | 520 | 0.0 | 599 |
| MS.gene051425.t1 | AT3G21650 | 63.982 | 447 | 158 | 2 | 38 | 481 | 74 | 520 | 0.0 | 599 |
| MS.gene051425.t1 | AT3G26030 | 55.487 | 483 | 198 | 7 | 1 | 476 | 1 | 473 | 0.0 | 530 |
| MS.gene051425.t1 | AT5G25510 | 56.109 | 442 | 189 | 3 | 41 | 481 | 47 | 484 | 0.0 | 528 |
| MS.gene051425.t1 | AT3G26020 | 53.101 | 516 | 159 | 5 | 18 | 479 | 42 | 528 | 0.0 | 520 |
| MS.gene051425.t1 | AT4G15415 | 64.070 | 398 | 125 | 3 | 1 | 380 | 1 | 398 | 2.73e-179 | 509 |
| MS.gene051425.t1 | AT3G26020 | 53.493 | 501 | 163 | 6 | 18 | 479 | 42 | 511 | 5.61e-177 | 507 |
| MS.gene051425.t1 | AT3G26020 | 53.493 | 501 | 163 | 6 | 18 | 479 | 42 | 511 | 5.61e-177 | 507 |
| MS.gene051425.t1 | AT3G26020 | 53.493 | 501 | 163 | 6 | 18 | 479 | 42 | 511 | 5.61e-177 | 507 |
| MS.gene051425.t1 | AT3G54930 | 61.461 | 397 | 136 | 4 | 1 | 380 | 1 | 397 | 4.48e-165 | 472 |
Find 121 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCCTCAATAGTTCCTTTC+AGG | 0.145115 | 1.1:-47573561 | MS.gene051425:intron |
| TCAAATGCTTCAAATATTAT+TGG | 0.164802 | 1.1:+47569803 | None:intergenic |
| CAGAAGGAAATTCTCTTTCT+TGG | 0.188122 | 1.1:-47573665 | MS.gene051425:CDS |
| ACTATTCTGCATCGTATATA+TGG | 0.243961 | 1.1:-47574010 | MS.gene051425:CDS |
| CTGTGGTATTGGGGAGCTTT+TGG | 0.260295 | 1.1:-47573906 | MS.gene051425:CDS |
| TCCTTTATTCCGCGATGTTC+CGG | 0.276511 | 1.1:-47574482 | MS.gene051425:CDS |
| GAGTTTATTCAATCGGGTTC+GGG | 0.291676 | 1.1:-47574334 | MS.gene051425:CDS |
| TCGCTTCTCAGCCTCTTCTT+TGG | 0.292815 | 1.1:+47569649 | None:intergenic |
| GCTCGCTGATACGGTTATTC+GGG | 0.297326 | 1.1:-47573720 | MS.gene051425:CDS |
| AGCATAAGTTGTTTCTTGTT+AGG | 0.301880 | 1.1:-47573835 | MS.gene051425:CDS |
| ATCGGGTTCGGGGAAAATTT+CGG | 0.307693 | 1.1:-47574323 | MS.gene051425:CDS |
| ACAGAATGGGGTTGCGGATA+TGG | 0.313593 | 1.1:-47569591 | MS.gene051425:CDS |
| CTGAGAGACACTGTGGTATT+GGG | 0.313813 | 1.1:-47573916 | MS.gene051425:CDS |
| AGCTCGCTGATACGGTTATT+CGG | 0.324281 | 1.1:-47573721 | MS.gene051425:CDS |
| TCCTTCTGACAATTAGTAAC+AGG | 0.324496 | 1.1:+47573680 | None:intergenic |
| TCGCAAAATGTTTATAGAAA+TGG | 0.329120 | 1.1:-47569726 | MS.gene051425:CDS |
| ACCGGAACATCGCGGAATAA+AGG | 0.331105 | 1.1:+47574481 | None:intergenic |
| TGGTACATAACAACCGATTT+CGG | 0.356364 | 1.1:+47573791 | None:intergenic |
| TGAGTTTATTCAATCGGGTT+CGG | 0.358288 | 1.1:-47574335 | MS.gene051425:CDS |
| TGCTGAATTGCAGTTGTTAC+CGG | 0.358371 | 1.1:+47574606 | None:intergenic |
| TGAAGAGGAGGAGCCTTGTT+TGG | 0.360063 | 1.1:-47574200 | MS.gene051425:CDS |
| CATAACTCAGTTTGTGGAAA+AGG | 0.382098 | 1.1:-47573750 | MS.gene051425:CDS |
| CACTGGAACCAGGCAGTTCA+TGG | 0.388415 | 1.1:-47569764 | MS.gene051425:CDS |
| ATTGTCAAGAAGAGATGATT+AGG | 0.390775 | 1.1:-47574297 | MS.gene051425:CDS |
| GATCAAGCGTCAAGCTTTGA+TGG | 0.395584 | 1.1:-47574365 | MS.gene051425:CDS |
| ATGCCTTTGACTCCATCTTC+TGG | 0.399034 | 1.1:-47574520 | MS.gene051425:CDS |
| AAACAAGGCTCCTCCTCTTC+AGG | 0.399985 | 1.1:+47574202 | None:intergenic |
| GCATAAGTTGTTTCTTGTTA+GGG | 0.402183 | 1.1:-47573834 | MS.gene051425:CDS |
| GCTTGTTGAGTTTATTCAAT+CGG | 0.408199 | 1.1:-47574341 | MS.gene051425:CDS |
| GCCTTTGCATAAGCCGAAAT+CGG | 0.408309 | 1.1:-47573804 | MS.gene051425:CDS |
| AACTTATGCTCCTCTTTCAT+AGG | 0.409453 | 1.1:+47573848 | None:intergenic |
| TGGGCTTAATTGCTCAAAAC+AGG | 0.412637 | 1.1:-47569838 | MS.gene051425:CDS |
| CAGAAGTGGCTGCACAGAAT+GGG | 0.413931 | 1.1:-47569604 | MS.gene051425:CDS |
| TTCGGGGTTTGTTGAAGTAT+TGG | 0.414510 | 1.1:-47573703 | MS.gene051425:CDS |
| GAAGCATGGTTGACGATAAC+CGG | 0.426180 | 1.1:+47574580 | None:intergenic |
| TGGAATAATGAGCATATTGT+GGG | 0.434748 | 1.1:-47569857 | MS.gene051425:CDS |
| ACTGAGAGACACTGTGGTAT+TGG | 0.436960 | 1.1:-47573917 | MS.gene051425:CDS |
| CTTGTTGAGTTTATTCAATC+GGG | 0.439165 | 1.1:-47574340 | MS.gene051425:CDS |
| AGCATGGCCACACTTGCAAC+TGG | 0.440152 | 1.1:-47574173 | MS.gene051425:CDS |
| GCAGAAGTGGCTGCACAGAA+TGG | 0.443480 | 1.1:-47569605 | MS.gene051425:CDS |
| TGGATCGGTGGAATCCGATT+TGG | 0.451477 | 1.1:+47574636 | None:intergenic |
| GACTCCATCTTCTGGTACAA+TGG | 0.459110 | 1.1:-47574512 | MS.gene051425:CDS |
| CTGAGAAGCGAGAATTGAAC+TGG | 0.460914 | 1.1:-47569637 | MS.gene051425:CDS |
| GCTTCTCTGCATAATTCCTC+TGG | 0.475698 | 1.1:+47569681 | None:intergenic |
| AGAGACAAAATATCTTTCTC+AGG | 0.477587 | 1.1:-47574453 | MS.gene051425:CDS |
| TGGAGAACTTGAGGAAGTGT+TGG | 0.478181 | 1.1:-47573645 | MS.gene051425:CDS |
| TTACTGCATAACTCAGTTTG+TGG | 0.480628 | 1.1:-47573756 | MS.gene051425:CDS |
| TCGTATATATGGAAAATTCA+TGG | 0.482526 | 1.1:-47573999 | MS.gene051425:CDS |
| CCTGCGTCGCATGAGAATAC+CGG | 0.483992 | 1.1:-47574241 | MS.gene051425:CDS |
| GAGGAATTATGCAGAGAAGC+AGG | 0.484705 | 1.1:-47569678 | MS.gene051425:CDS |
| ATGGAATAATGAGCATATTG+TGG | 0.489567 | 1.1:-47569858 | MS.gene051425:CDS |
| GTTTGCTTTGCCTATGAAAG+AGG | 0.495556 | 1.1:-47573858 | MS.gene051425:CDS |
| CTGGAAGAGGCTGGCAGAAG+TGG | 0.498519 | 1.1:-47569618 | MS.gene051425:CDS |
| ATCGGTGGAATCCGATTTGG+AGG | 0.505245 | 1.1:+47574639 | None:intergenic |
| GCGACGCAGGCGGTAAGCAC+CGG | 0.505505 | 1.1:+47574254 | None:intergenic |
| TTCATCTGATACTGATACAA+AGG | 0.506935 | 1.1:-47574122 | MS.gene051425:CDS |
| ACATCGCGGAATAAAGGAAC+GGG | 0.511124 | 1.1:+47574487 | None:intergenic |
| CAACTGCAATTCAGCAGCTC+CGG | 0.511861 | 1.1:-47574599 | MS.gene051425:CDS |
| TTCAAATACTCGCGCTCGCG+AGG | 0.513383 | 1.1:+47574034 | None:intergenic |
| GGCTGCACAGAATGGGGTTG+CGG | 0.513723 | 1.1:-47569597 | MS.gene051425:CDS |
| AGAGAAATATCGAGAGTCAC+TGG | 0.514677 | 1.1:-47569781 | MS.gene051425:CDS |
| AGCGAGAATTGAACTGGAAG+AGG | 0.521638 | 1.1:-47569631 | MS.gene051425:CDS |
| AGAACTTGAGGAAGTGTTGG+AGG | 0.522262 | 1.1:-47573642 | MS.gene051425:CDS |
| TCTCTTTCTTGGAGAACTTG+AGG | 0.522332 | 1.1:-47573654 | MS.gene051425:CDS |
| AGGATCAGTCGGCTCAGTCC+CGG | 0.528224 | 1.1:+47574222 | None:intergenic |
| ACCGATTTCGGCTTATGCAA+AGG | 0.528719 | 1.1:+47573803 | None:intergenic |
| AGTTGCAAGTGTGGCCATGC+TGG | 0.532160 | 1.1:+47574175 | None:intergenic |
| AGCCTTGTTTGGAGCCAGCA+TGG | 0.535988 | 1.1:-47574189 | MS.gene051425:CDS |
| TGCTGAATTTCAACGCTGCA+TGG | 0.540179 | 1.1:-47573609 | MS.gene051425:CDS |
| GGTTCCATTGTACCAGAAGA+TGG | 0.541379 | 1.1:+47574508 | None:intergenic |
| AGGCACCACCGCGGGAAGCA+TGG | 0.542441 | 1.1:+47574566 | None:intergenic |
| GCCTGTTACTAATTGTCAGA+AGG | 0.544384 | 1.1:-47573681 | MS.gene051425:CDS |
| AGCAGCGGAGGCACCACCGC+GGG | 0.544890 | 1.1:+47574558 | None:intergenic |
| GGCCATGCTGGCTCCAAACA+AGG | 0.545802 | 1.1:+47574187 | None:intergenic |
| CAGTTGTTACCGGACGGTGG+TGG | 0.546691 | 1.1:+47574616 | None:intergenic |
| AAAGGAACTATTGAGGCAGC+GGG | 0.547608 | 1.1:+47573565 | None:intergenic |
| GCTTGATTTATTCGATTCTG+AGG | 0.548493 | 1.1:-47574059 | MS.gene051425:CDS |
| TCCACCGATCCACCACCGTC+CGG | 0.549657 | 1.1:-47574625 | MS.gene051425:CDS |
| CAGTCAGCCCATGAACTGCC+TGG | 0.550570 | 1.1:+47569756 | None:intergenic |
| CTCGCTGATACGGTTATTCG+GGG | 0.552496 | 1.1:-47573719 | MS.gene051425:CDS |
| TTCAAGAAAATGATGAAAGG+AGG | 0.553760 | 1.1:-47574673 | MS.gene051425:CDS |
| GAAAGGAACTATTGAGGCAG+CGG | 0.554413 | 1.1:+47573564 | None:intergenic |
| CTGCGTCGCATGAGAATACC+GGG | 0.557186 | 1.1:-47574240 | MS.gene051425:CDS |
| AGAATTGAACTGGAAGAGGC+TGG | 0.561877 | 1.1:-47569627 | MS.gene051425:CDS |
| GTTACCGGACGGTGGTGGAT+CGG | 0.562355 | 1.1:+47574621 | None:intergenic |
| TCATAAACCAGTTGCAAGTG+TGG | 0.566341 | 1.1:+47574166 | None:intergenic |
| TATCGAGAGTCACTGGAACC+AGG | 0.568664 | 1.1:-47569774 | MS.gene051425:CDS |
| TCCTCCTCTTCAGGATCAGT+CGG | 0.572029 | 1.1:+47574211 | None:intergenic |
| TGCAGTAAGACAACTGTTGG+TGG | 0.577778 | 1.1:+47573771 | None:intergenic |
| GCAGGCAAAAGCCAAAGAAG+AGG | 0.582492 | 1.1:-47569660 | MS.gene051425:CDS |
| CTGATACAAAGGTTGCAAAA+CGG | 0.583494 | 1.1:-47574111 | MS.gene051425:CDS |
| AGTTTATTCAATCGGGTTCG+GGG | 0.585885 | 1.1:-47574333 | MS.gene051425:CDS |
| GTCAACCATGCTTCCCGCGG+TGG | 0.586221 | 1.1:-47574571 | MS.gene051425:CDS |
| GCCGACTGATCCTGAAGAGG+AGG | 0.586505 | 1.1:-47574212 | MS.gene051425:CDS |
| CCGGTATTCTCATGCGACGC+AGG | 0.590366 | 1.1:+47574241 | None:intergenic |
| GTACCAGAAGATGGAGTCAA+AGG | 0.590718 | 1.1:+47574517 | None:intergenic |
| ACCGGACGGTGGTGGATCGG+TGG | 0.591133 | 1.1:+47574624 | None:intergenic |
| ACTGGAACCAGGCAGTTCAT+GGG | 0.594896 | 1.1:-47569763 | MS.gene051425:CDS |
| TGAGAGACACTGTGGTATTG+GGG | 0.597851 | 1.1:-47573915 | MS.gene051425:CDS |
| TCAAGAAAATGATGAAAGGA+GGG | 0.598878 | 1.1:-47574672 | MS.gene051425:CDS |
| ACAAAATCCACAAACCTGAA+AGG | 0.601525 | 1.1:+47573547 | None:intergenic |
| ATCAAGCAACTTTAACACAA+AGG | 0.619210 | 1.1:+47574075 | None:intergenic |
| TCGGTGGAATCCGATTTGGA+GGG | 0.622058 | 1.1:+47574640 | None:intergenic |
| ATGTTCAAGAAAATGATGAA+AGG | 0.625026 | 1.1:-47574676 | MS.gene051425:CDS |
| ATCGTCAACCATGCTTCCCG+CGG | 0.625518 | 1.1:-47574574 | MS.gene051425:CDS |
| AACATCGCGGAATAAAGGAA+CGG | 0.627102 | 1.1:+47574486 | None:intergenic |
| GACGGTGGAGTTAGCAGCGG+AGG | 0.633882 | 1.1:+47574546 | None:intergenic |
| GTATTCTCATGCGACGCAGG+CGG | 0.645163 | 1.1:+47574244 | None:intergenic |
| AAACCTGAAAGGAACTATTG+AGG | 0.645760 | 1.1:+47573558 | None:intergenic |
| AGTCAAAGGCATCACGACGG+TGG | 0.657338 | 1.1:+47574531 | None:intergenic |
| AATTATTTGAAGAGTGCCAG+AGG | 0.659760 | 1.1:-47569697 | MS.gene051425:CDS |
| TGAGCCGACTGATCCTGAAG+AGG | 0.659976 | 1.1:-47574215 | MS.gene051425:CDS |
| TTATGCAGTAAGACAACTGT+TGG | 0.662587 | 1.1:+47573768 | None:intergenic |
| TTGCAGTTGTTACCGGACGG+TGG | 0.680994 | 1.1:+47574613 | None:intergenic |
| AGAAGTGGCTGCACAGAATG+GGG | 0.684083 | 1.1:-47569603 | MS.gene051425:CDS |
| CACGACGGTGGAGTTAGCAG+CGG | 0.687571 | 1.1:+47574543 | None:intergenic |
| GAATTGCAGTTGTTACCGGA+CGG | 0.688445 | 1.1:+47574610 | None:intergenic |
| TCTCGGAAACCGGAACATCG+CGG | 0.731357 | 1.1:+47574473 | None:intergenic |
| TGGAGTCAAAGGCATCACGA+CGG | 0.743260 | 1.1:+47574528 | None:intergenic |
| TAGCAGCGGAGGCACCACCG+CGG | 0.746726 | 1.1:+47574557 | None:intergenic |
| TATGAGACTGAGAGACACTG+TGG | 0.770949 | 1.1:-47573923 | MS.gene051425:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAAAAACATAAATTAAA+GGG | + | chr1.1:47574247-47574266 | None:intergenic | 10.0% |
| !!! | ATTCTTTAAAAATGTTTAAT+GGG | + | chr1.1:47572088-47572107 | None:intergenic | 10.0% |
| !!! | CAATTAACAATATTTTTTAT+CGG | - | chr1.1:47570304-47570323 | MS.gene051425:intron | 10.0% |
| !!! | TTCTAAAAAACATAAATTAA+AGG | + | chr1.1:47574248-47574267 | None:intergenic | 10.0% |
| !! | AACAAAAAAATTAATTCAAC+AGG | + | chr1.1:47571153-47571172 | None:intergenic | 15.0% |
| !! | ACAATTAAAGTGAATTAATT+AGG | + | chr1.1:47570969-47570988 | None:intergenic | 15.0% |
| !! | TTTAGTAATAATATCAAATG+AGG | - | chr1.1:47570924-47570943 | MS.gene051425:intron | 15.0% |
| !!! | AATATAGATTTTTTTTTTCC+TGG | - | chr1.1:47573836-47573855 | MS.gene051425:CDS | 15.0% |
| !!! | AATTTAAAATTCCAATCTAT+TGG | + | chr1.1:47573007-47573026 | None:intergenic | 15.0% |
| !!! | ATTGGATTTTAATATATTAG+AGG | + | chr1.1:47572343-47572362 | None:intergenic | 15.0% |
| !!! | CATTCTTTAAAAATGTTTAA+TGG | + | chr1.1:47572089-47572108 | None:intergenic | 15.0% |
| !!! | TGTTTATTTTTCTTCTTTTT+AGG | + | chr1.1:47573971-47573990 | None:intergenic | 15.0% |
| !!! | TTAATTGCTTTTCTAATAAA+CGG | + | chr1.1:47570291-47570310 | None:intergenic | 15.0% |
| !!! | TTTTTTAAATTGTTTTTTGC+TGG | - | chr1.1:47572885-47572904 | MS.gene051425:intron | 15.0% |
| !! | ACCTTGACATAAAAATTATA+TGG | - | chr1.1:47571661-47571680 | MS.gene051425:intron | 20.0% |
| !! | ATTTGAACTTAATATCTATC+AGG | - | chr1.1:47573106-47573125 | MS.gene051425:intron | 20.0% |
| !! | GACTTAATTCATTATAGATA+AGG | - | chr1.1:47571520-47571539 | MS.gene051425:intron | 20.0% |
| !! | TCAAATGCTTCAAATATTAT+TGG | + | chr1.1:47574456-47574475 | None:intergenic | 20.0% |
| !! | TTAAAAAAAAGACCTAGATT+AGG | + | chr1.1:47570869-47570888 | None:intergenic | 20.0% |
| !!! | ACCATATAATTTTTATGTCA+AGG | + | chr1.1:47571665-47571684 | None:intergenic | 20.0% |
| !!! | ATTCACTTTCTTTCATTTTT+TGG | - | chr1.1:47570778-47570797 | MS.gene051425:intron | 20.0% |
| !!! | ATTGTTACATAATATTTTCC+AGG | + | chr1.1:47573857-47573876 | None:intergenic | 20.0% |
| !!! | ATTTTGGGTAGTATTATTAA+TGG | - | chr1.1:47570375-47570394 | MS.gene051425:intron | 20.0% |
| !!! | TGTTTTTAGATCAAAAACAT+AGG | + | chr1.1:47571837-47571856 | None:intergenic | 20.0% |
| !!! | TTCACTTTCTTTCATTTTTT+GGG | - | chr1.1:47570779-47570798 | MS.gene051425:intron | 20.0% |
| !!! | TTTTGGGTAGTATTATTAAT+GGG | - | chr1.1:47570376-47570395 | MS.gene051425:intron | 20.0% |
| ! | AAAAAGCAATAAATTCACGA+GGG | + | chr1.1:47573070-47573089 | None:intergenic | 25.0% |
| ! | ATAAATTGTACTCCTAATCT+AGG | - | chr1.1:47570854-47570873 | MS.gene051425:intron | 25.0% |
| ! | ATGTTCAAGAAAATGATGAA+AGG | - | chr1.1:47569580-47569599 | MS.gene051425:CDS | 25.0% |
| ! | CCTAATGATTTCAATGAAAA+AGG | + | chr1.1:47573743-47573762 | None:intergenic | 25.0% |
| ! | CGTGTTATAATTTAGTTGTT+GGG | - | chr1.1:47572713-47572732 | MS.gene051425:intron | 25.0% |
| ! | CTAAATGGATAAAATCGTAA+TGG | + | chr1.1:47571546-47571565 | None:intergenic | 25.0% |
| ! | CTATCAATTTATTCCACAAT+AGG | + | chr1.1:47573448-47573467 | None:intergenic | 25.0% |
| ! | CTCATTATTCCATAAAAAGA+GGG | + | chr1.1:47574391-47574410 | None:intergenic | 25.0% |
| ! | CTCATTCTTAGACTTATTAT+GGG | + | chr1.1:47574122-47574141 | None:intergenic | 25.0% |
| ! | CTCCTTCTATATCTAATTAT+TGG | + | chr1.1:47571443-47571462 | None:intergenic | 25.0% |
| ! | GTAATAATATCAAATGAGGA+TGG | - | chr1.1:47570928-47570947 | MS.gene051425:intron | 25.0% |
| ! | GTCCAATAATTAGATATAGA+AGG | - | chr1.1:47571438-47571457 | MS.gene051425:intron | 25.0% |
| ! | TAAAAAGCAATAAATTCACG+AGG | + | chr1.1:47573071-47573090 | None:intergenic | 25.0% |
| ! | TAAAACTGTAAACAAACTAG+AGG | - | chr1.1:47573317-47573336 | MS.gene051425:intron | 25.0% |
| ! | TATAAAAACAGCTATATCGA+TGG | + | chr1.1:47572489-47572508 | None:intergenic | 25.0% |
| ! | TCATTCTTAGACTTATTATG+GGG | + | chr1.1:47574121-47574140 | None:intergenic | 25.0% |
| ! | TCGCAAAATGTTTATAGAAA+TGG | - | chr1.1:47574530-47574549 | MS.gene051425:CDS | 25.0% |
| ! | TCGTATATATGGAAAATTCA+TGG | - | chr1.1:47570257-47570276 | MS.gene051425:intron | 25.0% |
| ! | TGTAACATTACTTTCTTGTT+TGG | + | chr1.1:47572975-47572994 | None:intergenic | 25.0% |
| ! | TGTGATATATCAATAGTCAT+TGG | + | chr1.1:47572361-47572380 | None:intergenic | 25.0% |
| !! | CATTTTCAATTCCAATAGAT+TGG | - | chr1.1:47572993-47573012 | MS.gene051425:intron | 25.0% |
| !! | CTTTTATAGTGATGATAGTT+GGG | - | chr1.1:47570740-47570759 | MS.gene051425:intron | 25.0% |
| !! | TAGATTAGGAGTACAATTTA+TGG | + | chr1.1:47570855-47570874 | None:intergenic | 25.0% |
| !! | TGATATCTATCAACATTTTC+CGG | - | chr1.1:47569983-47570002 | MS.gene051425:intron | 25.0% |
| !! | TTCTGTCATCTTTTCTATAA+TGG | + | chr1.1:47571363-47571382 | None:intergenic | 25.0% |
| !! | TTTTTGATAGAACACTATGT+GGG | - | chr1.1:47572257-47572276 | MS.gene051425:intron | 25.0% |
| !!! | AAGTTTTTAGTTTGCTTGAT+TGG | - | chr1.1:47573927-47573946 | MS.gene051425:CDS | 25.0% |
| !!! | CCTTTTTCATTGAAATCATT+AGG | - | chr1.1:47573740-47573759 | MS.gene051425:CDS | 25.0% |
| !!! | TTTTAGAATCATGATCAGTT+TGG | - | chr1.1:47574260-47574279 | MS.gene051425:CDS | 25.0% |
| !!! | TTTTTCTTCTTTTTAGGTGT+AGG | + | chr1.1:47573965-47573984 | None:intergenic | 25.0% |
| AAACATGATCAAATCACATG+AGG | + | chr1.1:47573482-47573501 | None:intergenic | 30.0% | |
| AAAGCAATACATTATGTGTC+TGG | + | chr1.1:47573795-47573814 | None:intergenic | 30.0% | |
| AAAGTGAATCACAAATCAAC+AGG | + | chr1.1:47570767-47570786 | None:intergenic | 30.0% | |
| AACATAAATTAAAGGGCTTG+AGG | + | chr1.1:47574240-47574259 | None:intergenic | 30.0% | |
| AACATCCACAATTAAGTAGA+AGG | + | chr1.1:47570900-47570919 | None:intergenic | 30.0% | |
| AACTCTAGGTCAAATCATTA+AGG | - | chr1.1:47573585-47573604 | MS.gene051425:CDS | 30.0% | |
| AAGGTTGGAAGTTATATGTT+TGG | + | chr1.1:47572296-47572315 | None:intergenic | 30.0% | |
| AATATAGCCCTTCTATTAGT+AGG | - | chr1.1:47573882-47573901 | MS.gene051425:CDS | 30.0% | |
| ACTATTCTGCATCGTATATA+TGG | - | chr1.1:47570246-47570265 | MS.gene051425:intron | 30.0% | |
| AGAGACAAAATATCTTTCTC+AGG | - | chr1.1:47569803-47569822 | MS.gene051425:CDS | 30.0% | |
| AGATCAAAAACATAGGTCAT+GGG | + | chr1.1:47571830-47571849 | None:intergenic | 30.0% | |
| AGCCAAAAAGGATTAATCAA+TGG | + | chr1.1:47572939-47572958 | None:intergenic | 30.0% | |
| AGTAAATGATAGAGCCAAAA+AGG | + | chr1.1:47572951-47572970 | None:intergenic | 30.0% | |
| ATCAAGCAACTTTAACACAA+AGG | + | chr1.1:47570184-47570203 | None:intergenic | 30.0% | |
| ATGGAATAATGAGCATATTG+TGG | - | chr1.1:47574398-47574417 | MS.gene051425:CDS | 30.0% | |
| ATTGTCAAGAAGAGATGATT+AGG | - | chr1.1:47569959-47569978 | MS.gene051425:intron | 30.0% | |
| CAACTTCATCTAGTAAGAAA+AGG | - | chr1.1:47571575-47571594 | MS.gene051425:intron | 30.0% | |
| CACACAATAAAAAGAAACAC+TGG | + | chr1.1:47573132-47573151 | None:intergenic | 30.0% | |
| CACTGAGAGATAAAGAATAT+TGG | + | chr1.1:47572400-47572419 | None:intergenic | 30.0% | |
| CATTCTTAGACTTATTATGG+GGG | + | chr1.1:47574120-47574139 | None:intergenic | 30.0% | |
| CCAACTATCATCACTATAAA+AGG | + | chr1.1:47570742-47570761 | None:intergenic | 30.0% | |
| CCATAATAAGTCTAAGAATG+AGG | - | chr1.1:47574120-47574139 | MS.gene051425:CDS | 30.0% | |
| CCTCATTCTTAGACTTATTA+TGG | + | chr1.1:47574123-47574142 | None:intergenic | 30.0% | |
| CTCTCAATGAAAGAGAAATA+AGG | - | chr1.1:47571954-47571973 | MS.gene051425:intron | 30.0% | |
| CTTGTTGAGTTTATTCAATC+GGG | - | chr1.1:47569916-47569935 | MS.gene051425:intron | 30.0% | |
| GCCAAAAAGGATTAATCAAT+GGG | + | chr1.1:47572938-47572957 | None:intergenic | 30.0% | |
| GCGTGTTATAATTTAGTTGT+TGG | - | chr1.1:47572712-47572731 | MS.gene051425:intron | 30.0% | |
| GCTCATTATTCCATAAAAAG+AGG | + | chr1.1:47574392-47574411 | None:intergenic | 30.0% | |
| TAATTTAGTTGTTGGGACAT+TGG | - | chr1.1:47572720-47572739 | MS.gene051425:intron | 30.0% | |
| TACAATTGTACGCAACATAA+AGG | + | chr1.1:47571007-47571026 | None:intergenic | 30.0% | |
| TAGATCAAAAACATAGGTCA+TGG | + | chr1.1:47571831-47571850 | None:intergenic | 30.0% | |
| TCAAGAAAATGATGAAAGGA+GGG | - | chr1.1:47569584-47569603 | MS.gene051425:CDS | 30.0% | |
| TCATGTGATTTGATCATGTT+TGG | - | chr1.1:47573481-47573500 | MS.gene051425:intron | 30.0% | |
| TCTGTTCAAAATCTGTAACA+TGG | - | chr1.1:47573682-47573701 | MS.gene051425:CDS | 30.0% | |
| TGGAATAATGAGCATATTGT+GGG | - | chr1.1:47574399-47574418 | MS.gene051425:CDS | 30.0% | |
| TTACAAAACCAAACATAAGC+TGG | + | chr1.1:47571690-47571709 | None:intergenic | 30.0% | |
| TTACAACACAGGATTTCAAA+AGG | + | chr1.1:47572315-47572334 | None:intergenic | 30.0% | |
| TTATAGCATCTCACTTCAAT+AGG | + | chr1.1:47571127-47571146 | None:intergenic | 30.0% | |
| TTCAAGAAAATGATGAAAGG+AGG | - | chr1.1:47569583-47569602 | MS.gene051425:CDS | 30.0% | |
| TTCATCTGATACTGATACAA+AGG | - | chr1.1:47570134-47570153 | MS.gene051425:intron | 30.0% | |
| TTTCATTGAGAGAAAAACAC+AGG | + | chr1.1:47571946-47571965 | None:intergenic | 30.0% | |
| ! | ATGTTTCAAGTCGACATAAT+TGG | - | chr1.1:47571978-47571997 | MS.gene051425:intron | 30.0% |
| ! | CCTTTTATAGTGATGATAGT+TGG | - | chr1.1:47570739-47570758 | MS.gene051425:intron | 30.0% |
| ! | CTTGAGGATTAAAAAAGCAT+AGG | + | chr1.1:47574224-47574243 | None:intergenic | 30.0% |
| ! | GAGAAAGATATTTTGTCTCT+CGG | + | chr1.1:47569803-47569822 | None:intergenic | 30.0% |
| ! | GCTCAGGATTTTAAACTTTA+AGG | + | chr1.1:47574000-47574019 | None:intergenic | 30.0% |
| ! | GCTTGTTGAGTTTATTCAAT+CGG | - | chr1.1:47569915-47569934 | MS.gene051425:intron | 30.0% |
| ! | GCTTTTTATGTTTCTTTCTC+TGG | - | chr1.1:47573083-47573102 | MS.gene051425:intron | 30.0% |
| ! | GTGTTTCTTTTTATTGTGTG+TGG | - | chr1.1:47573132-47573151 | MS.gene051425:intron | 30.0% |
| ! | GTTTTTGATAGAACACTATG+TGG | - | chr1.1:47572256-47572275 | MS.gene051425:intron | 30.0% |
| ! | TTTTATCCATTTAGCTGACT+CGG | - | chr1.1:47571552-47571571 | MS.gene051425:intron | 30.0% |
| !! | ACCCATTGATTAATCCTTTT+TGG | - | chr1.1:47572934-47572953 | MS.gene051425:intron | 30.0% |
| !! | AGCATAAGTTGTTTCTTGTT+AGG | - | chr1.1:47570421-47570440 | MS.gene051425:intron | 30.0% |
| !! | ATTTGACCTAGAGTTTTTAG+AGG | + | chr1.1:47573580-47573599 | None:intergenic | 30.0% |
| !! | GCATAAGTTGTTTCTTGTTA+GGG | - | chr1.1:47570422-47570441 | MS.gene051425:intron | 30.0% |
| AAAACAGCTATATCGATGGA+TGG | + | chr1.1:47572485-47572504 | None:intergenic | 35.0% | |
| AAACAAGAGAAGCTCATCAA+CGG | - | chr1.1:47574020-47574039 | MS.gene051425:CDS | 35.0% | |
| AAACAGCTATATCGATGGAT+GGG | + | chr1.1:47572484-47572503 | None:intergenic | 35.0% | |
| AAACCATGATGACAGAGAAT+AGG | + | chr1.1:47574310-47574329 | None:intergenic | 35.0% | |
| AAACCTGAAAGGAACTATTG+AGG | + | chr1.1:47570701-47570720 | None:intergenic | 35.0% | |
| AACACAGGATTTCAAAAGGT+TGG | + | chr1.1:47572311-47572330 | None:intergenic | 35.0% | |
| AACTGTAAACAAACTAGAGG+CGG | - | chr1.1:47573320-47573339 | MS.gene051425:intron | 35.0% | |
| AACTTATGCTCCTCTTTCAT+AGG | + | chr1.1:47570411-47570430 | None:intergenic | 35.0% | |
| ACAAAATCCACAAACCTGAA+AGG | + | chr1.1:47570712-47570731 | None:intergenic | 35.0% | |
| ACAGTAGTTGAAGTTACTAG+TGG | + | chr1.1:47573253-47573272 | None:intergenic | 35.0% | |
| ACTAGTAACTTCAACTACTG+TGG | - | chr1.1:47573252-47573271 | MS.gene051425:intron | 35.0% | |
| AGAATGTTGCTCACTTATGA+CGG | - | chr1.1:47572103-47572122 | MS.gene051425:intron | 35.0% | |
| AGAGTAGATCAGATATGAAG+GGG | - | chr1.1:47572200-47572219 | MS.gene051425:intron | 35.0% | |
| CAGAACTACATTTCAATTGC+GGG | - | chr1.1:47571301-47571320 | MS.gene051425:intron | 35.0% | |
| CAGAAGGAAATTCTCTTTCT+TGG | - | chr1.1:47570591-47570610 | MS.gene051425:intron | 35.0% | |
| CAGGAAGGAGTTAAATCAAA+TGG | - | chr1.1:47571409-47571428 | MS.gene051425:intron | 35.0% | |
| CAGTTCATTAGTTAGGTTAG+AGG | - | chr1.1:47573544-47573563 | MS.gene051425:intron | 35.0% | |
| CATAACTCAGTTTGTGGAAA+AGG | - | chr1.1:47570506-47570525 | MS.gene051425:intron | 35.0% | |
| CCAATTATGTCCAATAATGC+AGG | + | chr1.1:47572017-47572036 | None:intergenic | 35.0% | |
| CCAGAACTACATTTCAATTG+CGG | - | chr1.1:47571300-47571319 | MS.gene051425:intron | 35.0% | |
| CCTGCATTATTGGACATAAT+TGG | - | chr1.1:47572014-47572033 | MS.gene051425:intron | 35.0% | |
| CGTTAAAAGCTAGTTGTCAA+GGG | + | chr1.1:47572586-47572605 | None:intergenic | 35.0% | |
| CTATGTAGAGAAAAGACTTG+TGG | - | chr1.1:47572163-47572182 | MS.gene051425:intron | 35.0% | |
| CTCTAACCTAACTAATGAAC+TGG | + | chr1.1:47573546-47573565 | None:intergenic | 35.0% | |
| CTGATACAAAGGTTGCAAAA+CGG | - | chr1.1:47570145-47570164 | MS.gene051425:intron | 35.0% | |
| GAGAGTAGATCAGATATGAA+GGG | - | chr1.1:47572199-47572218 | MS.gene051425:intron | 35.0% | |
| GCTTGATTTATTCGATTCTG+AGG | - | chr1.1:47570197-47570216 | MS.gene051425:intron | 35.0% | |
| GTCATGCATCTATTAGTGAT+GGG | - | chr1.1:47571046-47571065 | MS.gene051425:intron | 35.0% | |
| GTTAAAAGCTAGTTGTCAAG+GGG | + | chr1.1:47572585-47572604 | None:intergenic | 35.0% | |
| GTTAGAAATCTCAGAGTTGT+AGG | - | chr1.1:47571750-47571769 | MS.gene051425:intron | 35.0% | |
| TACCATTTGATGGGGAAAAA+GGG | - | chr1.1:47571073-47571092 | MS.gene051425:intron | 35.0% | |
| TAGCGTTCCTACTAATAGAA+GGG | + | chr1.1:47573892-47573911 | None:intergenic | 35.0% | |
| TATGGTTACCAGCTTATGTT+TGG | - | chr1.1:47571679-47571698 | MS.gene051425:intron | 35.0% | |
| TCATAAACTGCCTGCATTAT+TGG | - | chr1.1:47572004-47572023 | MS.gene051425:intron | 35.0% | |
| TCATGCATCTATTAGTGATG+GGG | - | chr1.1:47571047-47571066 | MS.gene051425:intron | 35.0% | |
| TCCACAATTAAGTAGAAGGA+TGG | + | chr1.1:47570896-47570915 | None:intergenic | 35.0% | |
| TCCTTCTGACAATTAGTAAC+AGG | + | chr1.1:47570579-47570598 | None:intergenic | 35.0% | |
| TCTAAGAATGAGGTCTTTGT+CGG | - | chr1.1:47574130-47574149 | MS.gene051425:CDS | 35.0% | |
| TGAGTTTATTCAATCGGGTT+CGG | - | chr1.1:47569921-47569940 | MS.gene051425:intron | 35.0% | |
| TGATTGCCAGTTCATTAGTT+AGG | - | chr1.1:47573537-47573556 | MS.gene051425:intron | 35.0% | |
| TGTACGCAACATAAAGGAAA+AGG | + | chr1.1:47571001-47571020 | None:intergenic | 35.0% | |
| TGTCATGCATCTATTAGTGA+TGG | - | chr1.1:47571045-47571064 | MS.gene051425:intron | 35.0% | |
| TTAAAAGCTAGTTGTCAAGG+GGG | + | chr1.1:47572584-47572603 | None:intergenic | 35.0% | |
| TTACCTATTCTCTGTCATCA+TGG | - | chr1.1:47574304-47574323 | MS.gene051425:CDS | 35.0% | |
| TTACTGCATAACTCAGTTTG+TGG | - | chr1.1:47570500-47570519 | MS.gene051425:intron | 35.0% | |
| TTATGCAGTAAGACAACTGT+TGG | + | chr1.1:47570491-47570510 | None:intergenic | 35.0% | |
| TTATTATGGGGGTCAACTAA+GGG | + | chr1.1:47574109-47574128 | None:intergenic | 35.0% | |
| ! | AAAGGCTTTTGCGTCAATTA+TGG | - | chr1.1:47571593-47571612 | MS.gene051425:intron | 35.0% |
| ! | AACAATTGCCTTTTCTCACT+AGG | + | chr1.1:47573654-47573673 | None:intergenic | 35.0% |
| ! | AGATGACCTCTAAAAACTCT+AGG | - | chr1.1:47573571-47573590 | MS.gene051425:CDS | 35.0% |
| ! | ATATTTTGTCTCTCGGAAAC+CGG | + | chr1.1:47569796-47569815 | None:intergenic | 35.0% |
| ! | ATGCAAAAAAGCATGTGCAT+GGG | + | chr1.1:47571209-47571228 | None:intergenic | 35.0% |
| ! | ATGCATCTTTTGATCTCCAT+AGG | - | chr1.1:47573612-47573631 | MS.gene051425:CDS | 35.0% |
| ! | GAAGTATCTTAAATACCGCA+GGG | + | chr1.1:47572052-47572071 | None:intergenic | 35.0% |
| ! | GTTTGAGTTTCAACCTATTG+TGG | - | chr1.1:47573432-47573451 | MS.gene051425:intron | 35.0% |
| ! | TAATGAGTTGGAGAAAGACA+TGG | - | chr1.1:47572234-47572253 | MS.gene051425:intron | 35.0% |
| ! | TGAGCTTTTGCTTAGATATG+TGG | - | chr1.1:47570110-47570129 | MS.gene051425:intron | 35.0% |
| ! | TGGTACATAACAACCGATTT+CGG | + | chr1.1:47570468-47570487 | None:intergenic | 35.0% |
| !! | AATAGTTCCTTTCAGGTTTG+TGG | - | chr1.1:47570702-47570721 | MS.gene051425:intron | 35.0% |
| !! | AATTATTTGAAGAGTGCCAG+AGG | - | chr1.1:47574559-47574578 | MS.gene051425:CDS | 35.0% |
| !! | AGAAGTATCTTAAATACCGC+AGG | + | chr1.1:47572053-47572072 | None:intergenic | 35.0% |
| !! | TTTCCACTTTTGTGTGTGAA+AGG | + | chr1.1:47571177-47571196 | None:intergenic | 35.0% |
| !!! | CATGCTTTTTTGCATGTACA+TGG | - | chr1.1:47571214-47571233 | MS.gene051425:intron | 35.0% |
| !!! | CCTTGACAACTAGCTTTTAA+CGG | - | chr1.1:47572584-47572603 | MS.gene051425:intron | 35.0% |
| !!! | TTCTTCTTTTTAGGTGTAGG+AGG | + | chr1.1:47573962-47573981 | None:intergenic | 35.0% |
| AAAAACATAGGTCATGGGAC+AGG | + | chr1.1:47571825-47571844 | None:intergenic | 40.0% | |
| AAACACTGATGTTGTCCTCT+GGG | - | chr1.1:47571878-47571897 | MS.gene051425:intron | 40.0% | |
| AACAGCTATATCGATGGATG+GGG | + | chr1.1:47572483-47572502 | None:intergenic | 40.0% | |
| AACATCGCGGAATAAAGGAA+CGG | + | chr1.1:47569773-47569792 | None:intergenic | 40.0% | |
| AAGTCGGGTCAAATCTTTAG+AGG | - | chr1.1:47571471-47571490 | MS.gene051425:intron | 40.0% | |
| AATGAGGTCTTTGTCGGTAT+AGG | - | chr1.1:47574136-47574155 | MS.gene051425:CDS | 40.0% | |
| ACCACTAACTTCGCTGTATA+AGG | + | chr1.1:47572439-47572458 | None:intergenic | 40.0% | |
| ACTTCGCTGTATAAGGAAGA+AGG | + | chr1.1:47572432-47572451 | None:intergenic | 40.0% | |
| AGAAGGAGACCAAGAAAAGT+CGG | - | chr1.1:47571455-47571474 | MS.gene051425:intron | 40.0% | |
| AGAGAAATATCGAGAGTCAC+TGG | - | chr1.1:47574475-47574494 | MS.gene051425:CDS | 40.0% | |
| AGAGTGAGTACGTAGTAGTT+TGG | - | chr1.1:47572825-47572844 | MS.gene051425:intron | 40.0% | |
| AGATGACAGAATCTCCTCTT+AGG | - | chr1.1:47571372-47571391 | MS.gene051425:intron | 40.0% | |
| AGTCGGGTCAAATCTTTAGA+GGG | - | chr1.1:47571472-47571491 | MS.gene051425:intron | 40.0% | |
| AGTTGCCATTGTCTCAAGAA+AGG | - | chr1.1:47572652-47572671 | MS.gene051425:intron | 40.0% | |
| AGTTTATTCAATCGGGTTCG+GGG | - | chr1.1:47569923-47569942 | MS.gene051425:intron | 40.0% | |
| ATAAAACCCTGTGCACACTT+TGG | - | chr1.1:47573171-47573190 | MS.gene051425:intron | 40.0% | |
| ATAGGCTATGGCAGAAAAGA+TGG | - | chr1.1:47572134-47572153 | MS.gene051425:intron | 40.0% | |
| ATGACAGAATCTCCTCTTAG+GGG | - | chr1.1:47571374-47571393 | MS.gene051425:intron | 40.0% | |
| CAAGACTGGTGTACTTATAG+GGG | - | chr1.1:47572529-47572548 | MS.gene051425:intron | 40.0% | |
| CCGCAATTGAAATGTAGTTC+TGG | + | chr1.1:47571303-47571322 | None:intergenic | 40.0% | |
| CCGTTAAAAGCTAGTTGTCA+AGG | + | chr1.1:47572587-47572606 | None:intergenic | 40.0% | |
| CTTATTATGGGGGTCAACTA+AGG | + | chr1.1:47574110-47574129 | None:intergenic | 40.0% | |
| CTTTGGCAAATTTGACATGC+AGG | - | chr1.1:47574353-47574372 | MS.gene051425:CDS | 40.0% | |
| GACTTGTGGATGTTGTAGTA+AGG | - | chr1.1:47572177-47572196 | MS.gene051425:intron | 40.0% | |
| GAGGCAAATCACTAATGAGT+TGG | - | chr1.1:47572222-47572241 | MS.gene051425:intron | 40.0% | |
| GAGTTTATTCAATCGGGTTC+GGG | - | chr1.1:47569922-47569941 | MS.gene051425:intron | 40.0% | |
| GATGACAGAATCTCCTCTTA+GGG | - | chr1.1:47571373-47571392 | MS.gene051425:intron | 40.0% | |
| GCAAGACTGGTGTACTTATA+GGG | - | chr1.1:47572528-47572547 | MS.gene051425:intron | 40.0% | |
| GCATAAAAAGCCCTCCAAAT+CGG | - | chr1.1:47569606-47569625 | MS.gene051425:CDS | 40.0% | |
| GCCAAAGCAAAGACTTATGA+GGG | + | chr1.1:47574340-47574359 | None:intergenic | 40.0% | |
| GCCATCCTTCTACTTAATTG+TGG | - | chr1.1:47570892-47570911 | MS.gene051425:intron | 40.0% | |
| GCCTGTTACTAATTGTCAGA+AGG | - | chr1.1:47570575-47570594 | MS.gene051425:intron | 40.0% | |
| GCGAAGTTAGTGGTTATGAA+TGG | - | chr1.1:47572445-47572464 | MS.gene051425:intron | 40.0% | |
| GGAGAGTAGATCAGATATGA+AGG | - | chr1.1:47572198-47572217 | MS.gene051425:intron | 40.0% | |
| GTACCATTTGATGGGGAAAA+AGG | - | chr1.1:47571072-47571091 | MS.gene051425:intron | 40.0% | |
| GTAGCGTTCCTACTAATAGA+AGG | + | chr1.1:47573893-47573912 | None:intergenic | 40.0% | |
| GTTTGCTTTGCCTATGAAAG+AGG | - | chr1.1:47570398-47570417 | MS.gene051425:intron | 40.0% | |
| TAAAACCCTGTGCACACTTT+GGG | - | chr1.1:47573172-47573191 | MS.gene051425:intron | 40.0% | |
| TAGAGGCAAGATTACAACAC+AGG | + | chr1.1:47572326-47572345 | None:intergenic | 40.0% | |
| TCATAAACCAGTTGCAAGTG+TGG | + | chr1.1:47570093-47570112 | None:intergenic | 40.0% | |
| TCCCTCATAAGTCTTTGCTT+TGG | - | chr1.1:47574336-47574355 | MS.gene051425:CDS | 40.0% | |
| TCCTTATACAGCGAAGTTAG+TGG | - | chr1.1:47572435-47572454 | MS.gene051425:intron | 40.0% | |
| TCTCTTTCTTGGAGAACTTG+AGG | - | chr1.1:47570602-47570621 | MS.gene051425:intron | 40.0% | |
| TCTGATAAGCACCAAAACAC+TGG | + | chr1.1:47572619-47572638 | None:intergenic | 40.0% | |
| TGCAAGACTGGTGTACTTAT+AGG | - | chr1.1:47572527-47572546 | MS.gene051425:intron | 40.0% | |
| TGCCAAAGCAAAGACTTATG+AGG | + | chr1.1:47574341-47574360 | None:intergenic | 40.0% | |
| TGCTACTGATGATCTGCATT+AGG | - | chr1.1:47573279-47573298 | MS.gene051425:intron | 40.0% | |
| TGCTGAATTGCAGTTGTTAC+CGG | + | chr1.1:47569653-47569672 | None:intergenic | 40.0% | |
| TGGGCTTAATTGCTCAAAAC+AGG | - | chr1.1:47574418-47574437 | MS.gene051425:CDS | 40.0% | |
| TTGCCTTTCACACACAAAAG+TGG | - | chr1.1:47571171-47571190 | MS.gene051425:intron | 40.0% | |
| ! | AGATTTGACCCGACTTTTCT+TGG | + | chr1.1:47571467-47571486 | None:intergenic | 40.0% |
| ! | ATTGCCTTTTCTCACTAGGT+AGG | + | chr1.1:47573650-47573669 | None:intergenic | 40.0% |
| ! | CATGCAAAAAAGCATGTGCA+TGG | + | chr1.1:47571210-47571229 | None:intergenic | 40.0% |
| ! | GAGTCCCATCTGAAATTGTT+GGG | - | chr1.1:47573366-47573385 | MS.gene051425:intron | 40.0% |
| ! | GGATTTTAAGCTCGCTGATA+CGG | - | chr1.1:47570527-47570546 | MS.gene051425:intron | 40.0% |
| ! | GGCGGAATGATATATTTTGC+AGG | - | chr1.1:47573338-47573357 | MS.gene051425:intron | 40.0% |
| ! | TACCCTTTTTCCCCATCAAA+TGG | + | chr1.1:47571078-47571097 | None:intergenic | 40.0% |
| ! | TCTTTTCTGCCATAGCCTAT+AGG | + | chr1.1:47572134-47572153 | None:intergenic | 40.0% |
| ! | TGAGTCCCATCTGAAATTGT+TGG | - | chr1.1:47573365-47573384 | MS.gene051425:intron | 40.0% |
| ! | TGATGATGAACATGTAGGGA+GGG | + | chr1.1:47574067-47574086 | None:intergenic | 40.0% |
| ! | TGGGTGATGATGAACATGTA+GGG | + | chr1.1:47574071-47574090 | None:intergenic | 40.0% |
| ! | TTGCCTTTTCTCACTAGGTA+GGG | + | chr1.1:47573649-47573668 | None:intergenic | 40.0% |
| ! | TTGGGTGATGATGAACATGT+AGG | + | chr1.1:47574072-47574091 | None:intergenic | 40.0% |
| !! | ATGGGGAAGTACCATTTGAT+GGG | - | chr1.1:47571064-47571083 | MS.gene051425:intron | 40.0% |
| !! | CTGAAAAGTACTCAAGCACT+TGG | + | chr1.1:47572855-47572874 | None:intergenic | 40.0% |
| !! | TTCGGGGTTTGTTGAAGTAT+TGG | - | chr1.1:47570553-47570572 | MS.gene051425:intron | 40.0% |
| !!! | GTGTTTTGGTGCTTATCAGA+TGG | - | chr1.1:47572619-47572638 | MS.gene051425:intron | 40.0% |
| AAAGGAACTATTGAGGCAGC+GGG | + | chr1.1:47570694-47570713 | None:intergenic | 45.0% | |
| AAGGGTTTGTGGAAGGAGTT+TGG | + | chr1.1:47574091-47574110 | None:intergenic | 45.0% | |
| AAGTTGCCGAGTCAGCTAAA+TGG | + | chr1.1:47571561-47571580 | None:intergenic | 45.0% | |
| ACATCGCGGAATAAAGGAAC+GGG | + | chr1.1:47569772-47569791 | None:intergenic | 45.0% | |
| ACTGAGAGACACTGTGGTAT+TGG | - | chr1.1:47570339-47570358 | MS.gene051425:intron | 45.0% | |
| AGAATTGAACTGGAAGAGGC+TGG | - | chr1.1:47574629-47574648 | MS.gene051425:CDS | 45.0% | |
| AGCGAGAATTGAACTGGAAG+AGG | - | chr1.1:47574625-47574644 | MS.gene051425:CDS | 45.0% | |
| AGCTCGCTGATACGGTTATT+CGG | - | chr1.1:47570535-47570554 | MS.gene051425:intron | 45.0% | |
| AGGGTTTGTGGAAGGAGTTT+GGG | + | chr1.1:47574090-47574109 | None:intergenic | 45.0% | |
| ATCGGGTTCGGGGAAAATTT+CGG | - | chr1.1:47569933-47569952 | MS.gene051425:intron | 45.0% | |
| ATGCCTTTGACTCCATCTTC+TGG | - | chr1.1:47569736-47569755 | MS.gene051425:CDS | 45.0% | |
| CAATCACACTCGCCTAACTT+GGG | + | chr1.1:47573523-47573542 | None:intergenic | 45.0% | |
| CAGTCTTGCACGTCACTTAA+AGG | + | chr1.1:47572517-47572536 | None:intergenic | 45.0% | |
| CTGAGAAGCGAGAATTGAAC+TGG | - | chr1.1:47574619-47574638 | MS.gene051425:CDS | 45.0% | |
| CTGAGAGACACTGTGGTATT+GGG | - | chr1.1:47570340-47570359 | MS.gene051425:intron | 45.0% | |
| CTGCCTCAATAGTTCCTTTC+AGG | - | chr1.1:47570695-47570714 | MS.gene051425:intron | 45.0% | |
| CTTATGACGGTAGCACCTAT+AGG | - | chr1.1:47572116-47572135 | MS.gene051425:intron | 45.0% | |
| CTTTAAGTGACGTGCAAGAC+TGG | - | chr1.1:47572515-47572534 | MS.gene051425:intron | 45.0% | |
| GAAACACTGATGTTGTCCTC+TGG | - | chr1.1:47571877-47571896 | MS.gene051425:intron | 45.0% | |
| GAAAGGAACTATTGAGGCAG+CGG | + | chr1.1:47570695-47570714 | None:intergenic | 45.0% | |
| GAAGCATGGTTGACGATAAC+CGG | + | chr1.1:47569679-47569698 | None:intergenic | 45.0% | |
| GAAGGAGACCAAGAAAAGTC+GGG | - | chr1.1:47571456-47571475 | MS.gene051425:intron | 45.0% | |
| GAATTGCAGTTGTTACCGGA+CGG | + | chr1.1:47569649-47569668 | None:intergenic | 45.0% | |
| GACTCCATCTTCTGGTACAA+TGG | - | chr1.1:47569744-47569763 | MS.gene051425:CDS | 45.0% | |
| GACTTGTAGAAGCCCAAGTT+AGG | - | chr1.1:47573508-47573527 | MS.gene051425:intron | 45.0% | |
| GAGGAATTATGCAGAGAAGC+AGG | - | chr1.1:47574578-47574597 | MS.gene051425:CDS | 45.0% | |
| GATAAGCACCAAAACACTGG+AGG | + | chr1.1:47572616-47572635 | None:intergenic | 45.0% | |
| GCAGCCCAACAATTTCAGAT+GGG | + | chr1.1:47573373-47573392 | None:intergenic | 45.0% | |
| GCCTTTGCATAAGCCGAAAT+CGG | - | chr1.1:47570452-47570471 | MS.gene051425:intron | 45.0% | |
| GCTTCTCTGCATAATTCCTC+TGG | + | chr1.1:47574578-47574597 | None:intergenic | 45.0% | |
| GGTAGCCTTTCTTGAGACAA+TGG | + | chr1.1:47572660-47572679 | None:intergenic | 45.0% | |
| GGTTCCATTGTACCAGAAGA+TGG | + | chr1.1:47569751-47569770 | None:intergenic | 45.0% | |
| GTACCAGAAGATGGAGTCAA+AGG | + | chr1.1:47569742-47569761 | None:intergenic | 45.0% | |
| GTAGATCAGATATGAAGGGG+AGG | - | chr1.1:47572203-47572222 | MS.gene051425:intron | 45.0% | |
| GTCAACTAAGGGTTTGTGGA+AGG | + | chr1.1:47574098-47574117 | None:intergenic | 45.0% | |
| TATGAGACTGAGAGACACTG+TGG | - | chr1.1:47570333-47570352 | MS.gene051425:intron | 45.0% | |
| TCCTCGTTCCATTATCAACG+TGG | - | chr1.1:47571916-47571935 | MS.gene051425:intron | 45.0% | |
| TCCTTTATTCCGCGATGTTC+CGG | - | chr1.1:47569774-47569793 | MS.gene051425:CDS | 45.0% | |
| TGACAGAATCTCCTCTTAGG+GGG | - | chr1.1:47571375-47571394 | MS.gene051425:intron | 45.0% | |
| TGACCCTACCTAGTGAGAAA+AGG | - | chr1.1:47573643-47573662 | MS.gene051425:CDS | 45.0% | |
| TGAGAGACACTGTGGTATTG+GGG | - | chr1.1:47570341-47570360 | MS.gene051425:intron | 45.0% | |
| TGCAGCCCAACAATTTCAGA+TGG | + | chr1.1:47573374-47573393 | None:intergenic | 45.0% | |
| TGCAGTAAGACAACTGTTGG+TGG | + | chr1.1:47570488-47570507 | None:intergenic | 45.0% | |
| TGCTGAATTTCAACGCTGCA+TGG | - | chr1.1:47570647-47570666 | MS.gene051425:intron | 45.0% | |
| TGGTGCAATGGTAAGGACTT+GGG | - | chr1.1:47572753-47572772 | MS.gene051425:intron | 45.0% | |
| ! | ACATTTCAATTGCGGGCTGT+TGG | - | chr1.1:47571308-47571327 | MS.gene051425:intron | 45.0% |
| ! | ACCGATTTCGGCTTATGCAA+AGG | + | chr1.1:47570456-47570475 | None:intergenic | 45.0% |
| ! | CAGGTCATCCACGTTGATAA+TGG | + | chr1.1:47571927-47571946 | None:intergenic | 45.0% |
| ! | GATCAAGCGTCAAGCTTTGA+TGG | - | chr1.1:47569891-47569910 | MS.gene051425:intron | 45.0% |
| ! | GTGATGATGAACATGTAGGG+AGG | + | chr1.1:47574068-47574087 | None:intergenic | 45.0% |
| ! | TGAGCTTCTCTTGTTTGCTC+AGG | + | chr1.1:47574016-47574035 | None:intergenic | 45.0% |
| ! | TGGAGAACTTGAGGAAGTGT+TGG | - | chr1.1:47570611-47570630 | MS.gene051425:intron | 45.0% |
| !! | AGAACTTGAGGAAGTGTTGG+AGG | - | chr1.1:47570614-47570633 | MS.gene051425:intron | 45.0% |
| !! | GATGGGGAAGTACCATTTGA+TGG | - | chr1.1:47571063-47571082 | MS.gene051425:intron | 45.0% |
| !! | GGGGAGCTTTTGGAGATTTT+GGG | - | chr1.1:47570360-47570379 | MS.gene051425:intron | 45.0% |
| !! | TCCACGTTGATAATGGAACG+AGG | + | chr1.1:47571920-47571939 | None:intergenic | 45.0% |
| !! | TGGGGAAGTACCATTTGATG+GGG | - | chr1.1:47571065-47571084 | MS.gene051425:intron | 45.0% |
| !! | TGGGGAGCTTTTGGAGATTT+TGG | - | chr1.1:47570359-47570378 | MS.gene051425:intron | 45.0% |
| AAACAAGGCTCCTCCTCTTC+AGG | + | chr1.1:47570057-47570076 | None:intergenic | 50.0% | |
| AAGAAAGGCTACCTGCTGAG+GGG | - | chr1.1:47572667-47572686 | MS.gene051425:intron | 50.0% | |
| AATACCCAAACCCCCCTAAG+AGG | + | chr1.1:47571389-47571408 | None:intergenic | 50.0% | |
| AATCTCCTCTTAGGGGGGTT+TGG | - | chr1.1:47571381-47571400 | MS.gene051425:intron | 50.0% | |
| ACAGAATGGGGTTGCGGATA+TGG | - | chr1.1:47574665-47574684 | MS.gene051425:CDS | 50.0% | |
| ACCGGAACATCGCGGAATAA+AGG | + | chr1.1:47569778-47569797 | None:intergenic | 50.0% | |
| ACGGTAGCACCTATAGGCTA+TGG | - | chr1.1:47572122-47572141 | MS.gene051425:intron | 50.0% | |
| ACTGGAACCAGGCAGTTCAT+GGG | - | chr1.1:47574493-47574512 | MS.gene051425:CDS | 50.0% | |
| AGAAGTGGCTGCACAGAATG+GGG | - | chr1.1:47574653-47574672 | MS.gene051425:CDS | 50.0% | |
| AGCATTCCCAAAGTGTGCAC+AGG | + | chr1.1:47573181-47573200 | None:intergenic | 50.0% | |
| ATCTCCTCTTAGGGGGGTTT+GGG | - | chr1.1:47571382-47571401 | MS.gene051425:intron | 50.0% | |
| CAACTGCAATTCAGCAGCTC+CGG | - | chr1.1:47569657-47569676 | MS.gene051425:CDS | 50.0% | |
| CAAGAAAGGCTACCTGCTGA+GGG | - | chr1.1:47572666-47572685 | MS.gene051425:intron | 50.0% | |
| CAGAAGTGGCTGCACAGAAT+GGG | - | chr1.1:47574652-47574671 | MS.gene051425:CDS | 50.0% | |
| CTATATCGATGGATGGGGTG+CGG | + | chr1.1:47572478-47572497 | None:intergenic | 50.0% | |
| CTCGCTGATACGGTTATTCG+GGG | - | chr1.1:47570537-47570556 | MS.gene051425:intron | 50.0% | |
| CTGGTGCAATGGTAAGGACT+TGG | - | chr1.1:47572752-47572771 | MS.gene051425:intron | 50.0% | |
| GACAGAATCTCCTCTTAGGG+GGG | - | chr1.1:47571376-47571395 | MS.gene051425:intron | 50.0% | |
| GCAATCACACTCGCCTAACT+TGG | + | chr1.1:47573524-47573543 | None:intergenic | 50.0% | |
| GCAGGCAAAAGCCAAAGAAG+AGG | - | chr1.1:47574596-47574615 | MS.gene051425:CDS | 50.0% | |
| GCATTCCCAAAGTGTGCACA+GGG | + | chr1.1:47573180-47573199 | None:intergenic | 50.0% | |
| GCTCGCTGATACGGTTATTC+GGG | - | chr1.1:47570536-47570555 | MS.gene051425:intron | 50.0% | |
| TAGGGTCAGCTATGGTCCTA+TGG | + | chr1.1:47573631-47573650 | None:intergenic | 50.0% | |
| TATCGAGAGTCACTGGAACC+AGG | - | chr1.1:47574482-47574501 | MS.gene051425:CDS | 50.0% | |
| TCAAGAAAGGCTACCTGCTG+AGG | - | chr1.1:47572665-47572684 | MS.gene051425:intron | 50.0% | |
| TCACTAGGTAGGGTCAGCTA+TGG | + | chr1.1:47573639-47573658 | None:intergenic | 50.0% | |
| TCCTCCTCTTCAGGATCAGT+CGG | + | chr1.1:47570048-47570067 | None:intergenic | 50.0% | |
| TCGCTTCTCAGCCTCTTCTT+TGG | + | chr1.1:47574610-47574629 | None:intergenic | 50.0% | |
| TGGATCGGTGGAATCCGATT+TGG | + | chr1.1:47569623-47569642 | None:intergenic | 50.0% | |
| TGGTTCTCGTTAACTCCCTG+CGG | - | chr1.1:47572034-47572053 | MS.gene051425:intron | 50.0% | |
| TTAGGGGGGTTTGGGTATTC+AGG | - | chr1.1:47571390-47571409 | MS.gene051425:intron | 50.0% | |
| TTCAGGCTGGTGCAATGGTA+AGG | - | chr1.1:47572746-47572765 | MS.gene051425:intron | 50.0% | |
| ! | CAGAGCGAGCCCTCTTTTTA+TGG | - | chr1.1:47574379-47574398 | MS.gene051425:CDS | 50.0% |
| !! | ATCGGTGGAATCCGATTTGG+AGG | + | chr1.1:47569620-47569639 | None:intergenic | 50.0% |
| !! | CTGTGGTATTGGGGAGCTTT+TGG | - | chr1.1:47570350-47570369 | MS.gene051425:intron | 50.0% |
| !! | GGAGTGTTCCTCCAGTGTTT+TGG | - | chr1.1:47572605-47572624 | MS.gene051425:intron | 50.0% |
| !! | TCGGTGGAATCCGATTTGGA+GGG | + | chr1.1:47569619-47569638 | None:intergenic | 50.0% |
| !! | TGAAGAGGAGGAGCCTTGTT+TGG | - | chr1.1:47570056-47570075 | MS.gene051425:intron | 50.0% |
| !! | TGGAGTCAAAGGCATCACGA+CGG | + | chr1.1:47569731-47569750 | None:intergenic | 50.0% |
| !! | TGTTGGGACATTGGCTCTTC+AGG | - | chr1.1:47572729-47572748 | MS.gene051425:intron | 50.0% |
| AGCATGGCCACACTTGCAAC+TGG | - | chr1.1:47570083-47570102 | MS.gene051425:intron | 55.0% | |
| AGCTGATGACAGCTTCCCAG+AGG | + | chr1.1:47571896-47571915 | None:intergenic | 55.0% | |
| AGTTGCAAGTGTGGCCATGC+TGG | + | chr1.1:47570084-47570103 | None:intergenic | 55.0% | |
| ATCGTCAACCATGCTTCCCG+CGG | - | chr1.1:47569682-47569701 | MS.gene051425:CDS | 55.0% | |
| CACTGGAACCAGGCAGTTCA+TGG | - | chr1.1:47574492-47574511 | MS.gene051425:CDS | 55.0% | |
| CCTGCGTCGCATGAGAATAC+CGG | - | chr1.1:47570015-47570034 | MS.gene051425:intron | 55.0% | |
| CTGCGTCGCATGAGAATACC+GGG | - | chr1.1:47570016-47570035 | MS.gene051425:intron | 55.0% | |
| GCAGAAGTGGCTGCACAGAA+TGG | - | chr1.1:47574651-47574670 | MS.gene051425:CDS | 55.0% | |
| GCATCGCATACTACTCGACG+TGG | + | chr1.1:47572800-47572819 | None:intergenic | 55.0% | |
| GGGGGTCAACTAAGGGTTTG+TGG | + | chr1.1:47574102-47574121 | None:intergenic | 55.0% | |
| GGGGGTTTGGGTATTCAGGA+AGG | - | chr1.1:47571394-47571413 | MS.gene051425:intron | 55.0% | |
| GTATTCTCATGCGACGCAGG+CGG | + | chr1.1:47570015-47570034 | None:intergenic | 55.0% | |
| GTCATGGGACAGGCATGTCA+CGG | + | chr1.1:47571815-47571834 | None:intergenic | 55.0% | |
| TCTCGGAAACCGGAACATCG+CGG | + | chr1.1:47569786-47569805 | None:intergenic | 55.0% | |
| TGAGCCGACTGATCCTGAAG+AGG | - | chr1.1:47570041-47570060 | MS.gene051425:intron | 55.0% | |
| TTCAAATACTCGCGCTCGCG+AGG | + | chr1.1:47570225-47570244 | None:intergenic | 55.0% | |
| TTGCAGTTGTTACCGGACGG+TGG | + | chr1.1:47569646-47569665 | None:intergenic | 55.0% | |
| TTTACAGTCAGCCCCTCAGC+AGG | + | chr1.1:47572681-47572700 | None:intergenic | 55.0% | |
| !! | AGCCTTGTTTGGAGCCAGCA+TGG | - | chr1.1:47570067-47570086 | MS.gene051425:intron | 55.0% |
| !! | AGTCAAAGGCATCACGACGG+TGG | + | chr1.1:47569728-47569747 | None:intergenic | 55.0% |
| CACGACGGTGGAGTTAGCAG+CGG | + | chr1.1:47569716-47569735 | None:intergenic | 60.0% | |
| CAGTCAGCCCATGAACTGCC+TGG | + | chr1.1:47574503-47574522 | None:intergenic | 60.0% | |
| CAGTTGTTACCGGACGGTGG+TGG | + | chr1.1:47569643-47569662 | None:intergenic | 60.0% | |
| CCGGTATTCTCATGCGACGC+AGG | + | chr1.1:47570018-47570037 | None:intergenic | 60.0% | |
| CTGGAAGAGGCTGGCAGAAG+TGG | - | chr1.1:47574638-47574657 | MS.gene051425:CDS | 60.0% | |
| GCCGACTGATCCTGAAGAGG+AGG | - | chr1.1:47570044-47570063 | MS.gene051425:intron | 60.0% | |
| GGCTCTTCAGGCTGGTGCAA+TGG | - | chr1.1:47572741-47572760 | MS.gene051425:intron | 60.0% | |
| GGCTGCACAGAATGGGGTTG+CGG | - | chr1.1:47574659-47574678 | MS.gene051425:CDS | 60.0% | |
| ! | AGGATCAGTCGGCTCAGTCC+CGG | + | chr1.1:47570037-47570056 | None:intergenic | 60.0% |
| !! | GGCCATGCTGGCTCCAAACA+AGG | + | chr1.1:47570072-47570091 | None:intergenic | 60.0% |
| !! | GGGACATTGGCTCTTCAGGC+TGG | - | chr1.1:47572733-47572752 | MS.gene051425:intron | 60.0% |
| !! | GTTACCGGACGGTGGTGGAT+CGG | + | chr1.1:47569638-47569657 | None:intergenic | 60.0% |
| GACGGTGGAGTTAGCAGCGG+AGG | + | chr1.1:47569713-47569732 | None:intergenic | 65.0% | |
| GTCAACCATGCTTCCCGCGG+TGG | - | chr1.1:47569685-47569704 | MS.gene051425:CDS | 65.0% | |
| TCCACCGATCCACCACCGTC+CGG | - | chr1.1:47569631-47569650 | MS.gene051425:CDS | 65.0% | |
| AGGCACCACCGCGGGAAGCA+TGG | + | chr1.1:47569693-47569712 | None:intergenic | 70.0% | |
| GCGACGCAGGCGGTAAGCAC+CGG | + | chr1.1:47570005-47570024 | None:intergenic | 70.0% | |
| !! | ACCGGACGGTGGTGGATCGG+TGG | + | chr1.1:47569635-47569654 | None:intergenic | 70.0% |
| !! | TAGCAGCGGAGGCACCACCG+CGG | + | chr1.1:47569702-47569721 | None:intergenic | 70.0% |
| !! | AGCAGCGGAGGCACCACCGC+GGG | + | chr1.1:47569701-47569720 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 47569580 | 47574698 | 47569580 | ID=MS.gene051425 |
| chr1.1 | mRNA | 47569580 | 47574698 | 47569580 | ID=MS.gene051425.t1;Parent=MS.gene051425 |
| chr1.1 | exon | 47573562 | 47574698 | 47573562 | ID=MS.gene051425.t1.exon1;Parent=MS.gene051425.t1 |
| chr1.1 | CDS | 47573562 | 47574698 | 47573562 | ID=cds.MS.gene051425.t1;Parent=MS.gene051425.t1 |
| chr1.1 | exon | 47569580 | 47569903 | 47569580 | ID=MS.gene051425.t1.exon2;Parent=MS.gene051425.t1 |
| chr1.1 | CDS | 47569580 | 47569903 | 47569580 | ID=cds.MS.gene051425.t1;Parent=MS.gene051425.t1 |
| Gene Sequence |
| Protein sequence |
