Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067043.t1 | XP_003601840.1 | 98.1 | 521 | 10 | 0 | 1 | 521 | 1 | 521 | 3.00E-278 | 967.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067043.t1 | Q9LU89 | 81.1 | 423 | 80 | 0 | 82 | 504 | 88 | 510 | 2.3e-202 | 706.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067043.t1 | G7J2I4 | 98.1 | 521 | 10 | 0 | 1 | 521 | 1 | 521 | 2.2e-278 | 967.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene067043 | 0.85573 | 5.19E-62 | -1.69E-46 |
| MS.gene049166 | MS.gene067043 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene04917 | MS.gene067043 | 0.859025 | 5.50E-63 | -1.69E-46 |
| MS.gene049283 | MS.gene067043 | 0.819722 | 1.00E-52 | -1.69E-46 |
| MS.gene049685 | MS.gene067043 | 0.809669 | 1.69E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene067043 | 0.820518 | 6.58E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene067043 | 0.840967 | 6.32E-58 | -1.69E-46 |
| MS.gene04998 | MS.gene067043 | 0.842683 | 2.23E-58 | -1.69E-46 |
| MS.gene050114 | MS.gene067043 | 0.850518 | 1.61E-60 | -1.69E-46 |
| MS.gene050317 | MS.gene067043 | 0.804844 | 1.78E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene067043 | 0.844469 | 7.42E-59 | -1.69E-46 |
| MS.gene050414 | MS.gene067043 | 0.80782 | 4.19E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene067043 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene067043 | 0.876262 | 1.61E-68 | -1.69E-46 |
| MS.gene050737 | MS.gene067043 | 0.824724 | 6.91E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene067043 | 0.846843 | 1.68E-59 | -1.69E-46 |
| MS.gene051184 | MS.gene067043 | 0.87861 | 2.44E-69 | -1.69E-46 |
| MS.gene051541 | MS.gene067043 | 0.85211 | 5.72E-61 | -1.69E-46 |
| MS.gene051819 | MS.gene067043 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene051831 | MS.gene067043 | 0.84186 | 3.68E-58 | -1.69E-46 |
| MS.gene051852 | MS.gene067043 | 0.821858 | 3.23E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene067043 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene052118 | MS.gene067043 | 0.805591 | 1.24E-49 | -1.69E-46 |
| MS.gene052296 | MS.gene067043 | 0.807123 | 5.89E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene067043 | 0.820026 | 8.52E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene067043 | 0.835512 | 1.61E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene067043 | 0.831768 | 1.38E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene067043 | 0.8003 | 1.54E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene067043 | 0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene067043 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene067043 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene067043 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene067043 | 0.805135 | 1.54E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene067043 | 0.844653 | 6.62E-59 | -1.69E-46 |
| MS.gene054892 | MS.gene067043 | 0.858102 | 1.04E-62 | -1.69E-46 |
| MS.gene054893 | MS.gene067043 | 0.859138 | 5.09E-63 | -1.69E-46 |
| MS.gene055226 | MS.gene067043 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene055327 | MS.gene067043 | 0.820453 | 6.81E-53 | -1.69E-46 |
| MS.gene055442 | MS.gene067043 | 0.809781 | 1.60E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene067043 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene067043 | 0.839446 | 1.58E-57 | -1.69E-46 |
| MS.gene056097 | MS.gene067043 | 0.841122 | 5.75E-58 | -1.69E-46 |
| MS.gene056181 | MS.gene067043 | 0.839941 | 1.17E-57 | -1.69E-46 |
| MS.gene056752 | MS.gene067043 | 0.820861 | 5.48E-53 | -1.69E-46 |
| MS.gene056787 | MS.gene067043 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene056849 | MS.gene067043 | 0.839403 | 1.62E-57 | -1.69E-46 |
| MS.gene056975 | MS.gene067043 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene067043 | 0.819925 | 8.99E-53 | -1.69E-46 |
| MS.gene057622 | MS.gene067043 | 0.810243 | 1.27E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene067043 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene058278 | MS.gene067043 | 0.840903 | 6.57E-58 | -1.69E-46 |
| MS.gene058429 | MS.gene067043 | 0.868435 | 6.54E-66 | -1.69E-46 |
| MS.gene058592 | MS.gene067043 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene067043 | 0.836858 | 7.31E-57 | -1.69E-46 |
| MS.gene059007 | MS.gene067043 | 0.806822 | 6.83E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene067043 | 0.843593 | 1.27E-58 | -1.69E-46 |
| MS.gene06010 | MS.gene067043 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene067043 | 0.811431 | 7.03E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene067043 | 0.835556 | 1.57E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene067043 | 0.807852 | 4.13E-50 | -1.69E-46 |
| MS.gene060563 | MS.gene067043 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene060851 | MS.gene067043 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene067043 | 0.804165 | 2.46E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene067043 | 0.802121 | 6.52E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene067043 | 0.860158 | 2.51E-63 | -1.69E-46 |
| MS.gene060933 | MS.gene067043 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene067043 | 0.823409 | 1.41E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25819 | MS.gene067043 | PPI |
| MS.gene47441 | MS.gene067043 | PPI |
| MS.gene021631 | MS.gene067043 | PPI |
| MS.gene014785 | MS.gene067043 | PPI |
| MS.gene067043 | MS.gene020631 | PPI |
| MS.gene067043 | MS.gene015941 | PPI |
| MS.gene044183 | MS.gene067043 | PPI |
| MS.gene71483 | MS.gene067043 | PPI |
| MS.gene072957 | MS.gene067043 | PPI |
| MS.gene79120 | MS.gene067043 | PPI |
| MS.gene067043 | MS.gene051425 | PPI |
| MS.gene007562 | MS.gene067043 | PPI |
| MS.gene067043 | MS.gene22385 | PPI |
| MS.gene067043 | MS.gene75564 | PPI |
| MS.gene045221 | MS.gene067043 | PPI |
| MS.gene007383 | MS.gene067043 | PPI |
| MS.gene029756 | MS.gene067043 | PPI |
| MS.gene035014 | MS.gene067043 | PPI |
| MS.gene70740 | MS.gene067043 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067043.t1 | MTR_3g086010 | 99.232 | 521 | 4 | 0 | 1 | 521 | 1 | 521 | 0.0 | 1070 |
| MS.gene067043.t1 | MTR_6g022720 | 68.330 | 521 | 154 | 4 | 1 | 520 | 1 | 511 | 0.0 | 729 |
| MS.gene067043.t1 | MTR_3g080070 | 64.205 | 528 | 170 | 5 | 1 | 513 | 1 | 524 | 0.0 | 660 |
| MS.gene067043.t1 | MTR_6g022720 | 70.545 | 404 | 111 | 3 | 1 | 403 | 1 | 397 | 0.0 | 583 |
| MS.gene067043.t1 | MTR_1g062950 | 60.560 | 464 | 173 | 4 | 48 | 506 | 24 | 482 | 0.0 | 570 |
| MS.gene067043.t1 | MTR_1g111570 | 55.052 | 485 | 205 | 3 | 40 | 512 | 5 | 488 | 0.0 | 562 |
| MS.gene067043.t1 | MTR_1g011460 | 53.113 | 514 | 215 | 4 | 1 | 512 | 1 | 490 | 0.0 | 547 |
| MS.gene067043.t1 | MTR_3g107980 | 52.724 | 514 | 224 | 4 | 1 | 512 | 1 | 497 | 0.0 | 541 |
| MS.gene067043.t1 | MTR_4g113020 | 50.992 | 504 | 223 | 4 | 1 | 500 | 1 | 484 | 0.0 | 520 |
| MS.gene067043.t1 | MTR_7g102900 | 67.477 | 329 | 107 | 0 | 83 | 411 | 42 | 370 | 3.25e-161 | 462 |
| MS.gene067043.t1 | MTR_4g113020 | 50.856 | 409 | 177 | 4 | 1 | 405 | 1 | 389 | 2.56e-142 | 415 |
| MS.gene067043.t1 | MTR_1g112940 | 41.337 | 404 | 235 | 1 | 103 | 506 | 39 | 440 | 5.18e-117 | 353 |
| MS.gene067043.t1 | MTR_7g102920 | 55.340 | 103 | 46 | 0 | 403 | 505 | 22 | 124 | 1.92e-33 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067043.t1 | AT3G26020 | 72.353 | 510 | 135 | 3 | 1 | 504 | 1 | 510 | 0.0 | 736 |
| MS.gene067043.t1 | AT3G26020 | 72.353 | 510 | 135 | 3 | 1 | 504 | 1 | 510 | 0.0 | 736 |
| MS.gene067043.t1 | AT3G26020 | 72.353 | 510 | 135 | 3 | 1 | 504 | 1 | 510 | 0.0 | 736 |
| MS.gene067043.t1 | AT3G26020 | 72.353 | 510 | 135 | 3 | 1 | 504 | 1 | 510 | 0.0 | 736 |
| MS.gene067043.t1 | AT1G13460 | 74.730 | 463 | 114 | 1 | 44 | 506 | 32 | 491 | 0.0 | 725 |
| MS.gene067043.t1 | AT1G13460 | 74.730 | 463 | 114 | 1 | 44 | 506 | 32 | 491 | 0.0 | 725 |
| MS.gene067043.t1 | AT4G15415 | 65.692 | 513 | 170 | 4 | 1 | 513 | 1 | 507 | 0.0 | 687 |
| MS.gene067043.t1 | AT4G15415 | 65.692 | 513 | 170 | 4 | 1 | 513 | 1 | 507 | 0.0 | 687 |
| MS.gene067043.t1 | AT4G15415 | 65.692 | 513 | 170 | 4 | 1 | 513 | 1 | 507 | 0.0 | 687 |
| MS.gene067043.t1 | AT4G15415 | 65.692 | 513 | 170 | 4 | 1 | 513 | 1 | 507 | 0.0 | 687 |
| MS.gene067043.t1 | AT3G21650 | 62.335 | 531 | 180 | 4 | 1 | 513 | 1 | 529 | 0.0 | 662 |
| MS.gene067043.t1 | AT3G21650 | 62.335 | 531 | 180 | 4 | 1 | 513 | 1 | 529 | 0.0 | 662 |
| MS.gene067043.t1 | AT3G26020 | 61.470 | 558 | 132 | 5 | 1 | 504 | 1 | 529 | 0.0 | 640 |
| MS.gene067043.t1 | AT3G26020 | 62.292 | 541 | 138 | 7 | 1 | 504 | 1 | 512 | 0.0 | 622 |
| MS.gene067043.t1 | AT3G26020 | 62.292 | 541 | 138 | 7 | 1 | 504 | 1 | 512 | 0.0 | 622 |
| MS.gene067043.t1 | AT3G26020 | 62.292 | 541 | 138 | 7 | 1 | 504 | 1 | 512 | 0.0 | 622 |
| MS.gene067043.t1 | AT3G26030 | 57.030 | 505 | 186 | 5 | 1 | 503 | 1 | 476 | 0.0 | 592 |
| MS.gene067043.t1 | AT3G09880 | 57.115 | 513 | 190 | 4 | 1 | 506 | 1 | 490 | 0.0 | 584 |
| MS.gene067043.t1 | AT5G03470 | 56.660 | 503 | 200 | 4 | 1 | 502 | 1 | 486 | 0.0 | 565 |
| MS.gene067043.t1 | AT5G25510 | 51.823 | 521 | 226 | 5 | 1 | 520 | 1 | 497 | 0.0 | 533 |
| MS.gene067043.t1 | AT4G15415 | 65.099 | 404 | 135 | 4 | 1 | 404 | 1 | 398 | 0.0 | 530 |
| MS.gene067043.t1 | AT3G54930 | 55.794 | 466 | 194 | 2 | 40 | 503 | 41 | 496 | 0.0 | 521 |
| MS.gene067043.t1 | AT3G54930 | 55.794 | 466 | 194 | 2 | 40 | 503 | 41 | 496 | 0.0 | 521 |
| MS.gene067043.t1 | AT3G54930 | 55.041 | 367 | 153 | 2 | 40 | 404 | 41 | 397 | 4.15e-136 | 400 |
Find 88 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTTAATACCTGAAAA+TGG | 0.154967 | 3.4:-80234303 | None:intergenic |
| AGAAGAGCATAAATTGTTTC+TGG | 0.170362 | 3.4:+80234009 | MS.gene067043:CDS |
| ATGAAGCTTTACCAGCATTT+AGG | 0.170397 | 3.4:+80233357 | MS.gene067043:CDS |
| TGAAGCTTTACCAGCATTTA+GGG | 0.264284 | 3.4:+80233358 | MS.gene067043:CDS |
| TCCTTTGAACTATTTGTTAT+CGG | 0.271122 | 3.4:-80234169 | None:intergenic |
| TTGATGAACTATGTTCAAAA+AGG | 0.297427 | 3.4:+80233094 | None:intergenic |
| ATGTCTTTGCATCGGATCTA+TGG | 0.305697 | 3.4:+80233839 | MS.gene067043:CDS |
| TCGGATCTATGGCAAGTTAA+TGG | 0.331006 | 3.4:+80233850 | MS.gene067043:CDS |
| GAACATTTAAAGTCAAACTA+TGG | 0.333782 | 3.4:-80237565 | None:intergenic |
| ATTCTGGGGAGTATCATTAA+TGG | 0.341716 | 3.4:+80233968 | MS.gene067043:CDS |
| CATTGATGGCGTTGAATTAG+AGG | 0.343144 | 3.4:+80233631 | MS.gene067043:CDS |
| AAAATTTAATACCTGAAAAT+GGG | 0.353230 | 3.4:-80234302 | None:intergenic |
| CCATTGGAATTCTCATTCAT+AGG | 0.353655 | 3.4:-80233320 | None:intergenic |
| ACCATACATCGCTGGAATTC+TGG | 0.359106 | 3.4:-80234241 | None:intergenic |
| CTCTCTTTCTCTAGGATCTT+CGG | 0.365168 | 3.4:-80233807 | None:intergenic |
| AATTTATGCTCTTCTTTCAA+TGG | 0.371325 | 3.4:-80234001 | None:intergenic |
| CAACCTGGGAGTAGCAAAAC+TGG | 0.401143 | 3.4:+80233227 | MS.gene067043:CDS |
| CGTGAGAATAAGCTCATTGA+TGG | 0.406564 | 3.4:+80233617 | MS.gene067043:CDS |
| TTATTGCATTACTCAGTTTG+TGG | 0.408341 | 3.4:+80234093 | MS.gene067043:CDS |
| GGAGATTAAGAGACAAGCTT+TGG | 0.411887 | 3.4:+80233481 | MS.gene067043:CDS |
| CGGAAAGAGCTTTGTTCTTG+TGG | 0.412229 | 3.4:+80237435 | MS.gene067043:CDS |
| TTTGAGACTGAGAAGCATAA+TGG | 0.425058 | 3.4:+80233926 | MS.gene067043:CDS |
| GTTACTTGCAGCTTTCTTTG+CGG | 0.431372 | 3.4:-80237717 | None:intergenic |
| AGCTTATTCTCACGCGGTTG+AGG | 0.441683 | 3.4:-80233608 | None:intergenic |
| TGACCCTACTAAGCATCTTA+AGG | 0.444211 | 3.4:+80233454 | MS.gene067043:CDS |
| TCTAATTCTTCTTTGAATGC+AGG | 0.444424 | 3.4:+80233257 | MS.gene067043:CDS |
| GCCAACTTTGCATCCAGCTC+AGG | 0.444703 | 3.4:-80233731 | None:intergenic |
| TCCCATCATCTTTCCCGCGT+TGG | 0.446029 | 3.4:+80237508 | MS.gene067043:CDS |
| ACTTGCTGATACAATCATAA+GGG | 0.446448 | 3.4:+80234129 | MS.gene067043:CDS |
| TGGTGCATCGACCTTTCATC+AGG | 0.447090 | 3.4:+80233870 | MS.gene067043:CDS |
| CTCCAACGCGGGAAAGATGA+TGG | 0.449918 | 3.4:-80237510 | None:intergenic |
| TTCAAATACTCTCTTTCTCT+AGG | 0.456945 | 3.4:-80233815 | None:intergenic |
| ATAAGAATTAAAATTACCAT+TGG | 0.460065 | 3.4:-80233336 | None:intergenic |
| ACCTGAGCTGGATGCAAAGT+TGG | 0.460914 | 3.4:+80233730 | MS.gene067043:CDS |
| TCCAGAATTCCAGCGATGTA+TGG | 0.464531 | 3.4:+80234240 | MS.gene067043:CDS |
| TACTAAGCATCTTAAGGAAA+AGG | 0.466933 | 3.4:+80233460 | MS.gene067043:CDS |
| TCAAAGGAAGTTATGTTCCT+AGG | 0.480411 | 3.4:+80234184 | MS.gene067043:CDS |
| AACTTGCTGATACAATCATA+AGG | 0.482131 | 3.4:+80234128 | MS.gene067043:CDS |
| ATTTGTTGCATCACCTGAGC+TGG | 0.492210 | 3.4:+80233718 | MS.gene067043:CDS |
| TTGATTGATTTCCTGATGAA+AGG | 0.494201 | 3.4:-80233881 | None:intergenic |
| CGAAGCCACATGGAAACGCT+TGG | 0.500307 | 3.4:+80237685 | MS.gene067043:CDS |
| AGTTATGTTCCTAGGTGAGT+TGG | 0.503134 | 3.4:+80234192 | MS.gene067043:CDS |
| CAGCAGGGCGCGAAGCCACA+TGG | 0.503391 | 3.4:+80237675 | MS.gene067043:CDS |
| TGATACATTGCTAAGCACTT+TGG | 0.506415 | 3.4:-80234058 | None:intergenic |
| TTTCCTTAAGATGCTTAGTA+GGG | 0.507948 | 3.4:-80233457 | None:intergenic |
| GCACTACCTCGCAAATCTGC+AGG | 0.509546 | 3.4:+80237761 | MS.gene067043:CDS |
| ATTTGAAAATGTCTTTGCAT+CGG | 0.516512 | 3.4:+80233831 | MS.gene067043:CDS |
| TCATAAACAATTTGCAAATG+AGG | 0.517103 | 3.4:-80233683 | None:intergenic |
| AGGTGAGTTGGAAGAAGTCT+TGG | 0.518621 | 3.4:+80234204 | MS.gene067043:CDS |
| AAGGAAGGTGAAGTGACAGC+AGG | 0.527915 | 3.4:+80237659 | MS.gene067043:CDS |
| AAGCACTTTGGTTTGTGCAA+CGG | 0.534767 | 3.4:-80234046 | None:intergenic |
| TTCGGAACATCCCTAAATGC+TGG | 0.537273 | 3.4:-80233368 | None:intergenic |
| TACTGAGAATGTAATGCAAG+AGG | 0.549162 | 3.4:+80233544 | MS.gene067043:CDS |
| AGTGATATTGTTACACAACC+TGG | 0.553068 | 3.4:+80233212 | MS.gene067043:CDS |
| TGGCGTTGAATTAGAGGAGG+AGG | 0.556878 | 3.4:+80233637 | MS.gene067043:CDS |
| GCCGATAACAAATAGTTCAA+AGG | 0.558222 | 3.4:+80234168 | MS.gene067043:CDS |
| CAAGGACAGTTTCATAGTCA+TGG | 0.562679 | 3.4:+80233281 | MS.gene067043:CDS |
| CACATGGAAACGCTTGGAGG+AGG | 0.564031 | 3.4:+80237691 | MS.gene067043:CDS |
| AGCCTTCGATGGATCCTTCG+TGG | 0.564901 | 3.4:+80233660 | MS.gene067043:CDS |
| TTTGTATTTCTCTCCAACGC+GGG | 0.566060 | 3.4:-80237521 | None:intergenic |
| AAATTTAATACCTGAAAATG+GGG | 0.572594 | 3.4:-80234301 | None:intergenic |
| GTTTGAGCAAGATGAATCAA+AGG | 0.576602 | 3.4:+80237640 | MS.gene067043:CDS |
| TCTTCTTTGAATGCAGGACA+AGG | 0.584808 | 3.4:+80233263 | MS.gene067043:CDS |
| GGTTCTGAGAATCGTGAACA+AGG | 0.586207 | 3.4:+80233149 | MS.gene067043:CDS |
| AATGCAAGAGGTTGTTAAGA+TGG | 0.587807 | 3.4:+80233556 | MS.gene067043:CDS |
| AGAGGAGGAGGAGCCTTCGA+TGG | 0.596230 | 3.4:+80233649 | MS.gene067043:CDS |
| ACAATAGCACCATACATCGC+TGG | 0.596620 | 3.4:-80234249 | None:intergenic |
| TCCAACGCGGGAAAGATGAT+GGG | 0.597175 | 3.4:-80237509 | None:intergenic |
| CTTGCTGATACAATCATAAG+GGG | 0.598460 | 3.4:+80234130 | MS.gene067043:CDS |
| GGTGGAAATTCAAGAAGCCA+TGG | 0.599824 | 3.4:+80233170 | MS.gene067043:CDS |
| CCTATGAATGAGAATTCCAA+TGG | 0.604698 | 3.4:+80233320 | MS.gene067043:CDS |
| GAGCAAGATGAATCAAAGGA+AGG | 0.607829 | 3.4:+80237644 | MS.gene067043:CDS |
| GTTTGATTAAGTTCACGATG+TGG | 0.613263 | 3.4:-80237466 | None:intergenic |
| ATCTAACCTGCAGATTTGCG+AGG | 0.619938 | 3.4:-80237767 | None:intergenic |
| AGCCACATGGAAACGCTTGG+AGG | 0.620869 | 3.4:+80237688 | MS.gene067043:CDS |
| CTCCTCCAAGCGTTTCCATG+TGG | 0.625054 | 3.4:-80237690 | None:intergenic |
| AGACTTCTTCCAACTCACCT+AGG | 0.632209 | 3.4:-80234201 | None:intergenic |
| AGGAAGGTGAAGTGACAGCA+GGG | 0.635472 | 3.4:+80237660 | MS.gene067043:CDS |
| GTGATATTGTTACACAACCT+GGG | 0.639533 | 3.4:+80233213 | MS.gene067043:CDS |
| TGATGGCGTTGAATTAGAGG+AGG | 0.644796 | 3.4:+80233634 | MS.gene067043:CDS |
| ATTTGCAAATGAGGCCACGA+AGG | 0.651420 | 3.4:-80233674 | None:intergenic |
| GGCCACGAAGGATCCATCGA+AGG | 0.651471 | 3.4:-80233662 | None:intergenic |
| AATTTAATACCTGAAAATGG+GGG | 0.674910 | 3.4:-80234300 | None:intergenic |
| ATACATCGCTGGAATTCTGG+AGG | 0.675794 | 3.4:-80234238 | None:intergenic |
| TATTCAAACAATGAGAAACA+CGG | 0.684922 | 3.4:-80234276 | None:intergenic |
| TCTGAGAATCGTGAACAAGG+TGG | 0.686992 | 3.4:+80233152 | MS.gene067043:CDS |
| TCAATGAGCTTATTCTCACG+CGG | 0.708503 | 3.4:-80233614 | None:intergenic |
| TTGCTGATACAATCATAAGG+GGG | 0.715338 | 3.4:+80234131 | MS.gene067043:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTATCTTAAAGTT+AGG | + | chr3.4:80234374-80234393 | MS.gene067043:intron | 15.0% |
| !! | AAAATTTAATACCTGAAAAT+GGG | - | chr3.4:80234305-80234324 | None:intergenic | 15.0% |
| !! | ATAAGAATTAAAATTACCAT+TGG | - | chr3.4:80233339-80233358 | None:intergenic | 15.0% |
| !!! | AAATTATATAAAGCGTTTTA+TGG | + | chr3.4:80236105-80236124 | MS.gene067043:intron | 15.0% |
| !! | AAATTTAATACCTGAAAATG+GGG | - | chr3.4:80234304-80234323 | None:intergenic | 20.0% |
| !! | AACAATTATATGCTATATGT+TGG | + | chr3.4:80236652-80236671 | MS.gene067043:intron | 20.0% |
| !! | AAGAATAATCCAAAAGTTAA+AGG | - | chr3.4:80235035-80235054 | None:intergenic | 20.0% |
| !! | AATTCAGATAATATTCACAA+TGG | - | chr3.4:80235144-80235163 | None:intergenic | 20.0% |
| !! | ATAGTATGTCTTTAAATTGT+AGG | - | chr3.4:80236608-80236627 | None:intergenic | 20.0% |
| !! | ATATAAAAGTAACTTTGTAG+AGG | - | chr3.4:80236190-80236209 | None:intergenic | 20.0% |
| !! | CATATATGCATAACTAATTA+AGG | + | chr3.4:80234652-80234671 | MS.gene067043:intron | 20.0% |
| !! | GAAAATTTAATACCTGAAAA+TGG | - | chr3.4:80234306-80234325 | None:intergenic | 20.0% |
| !! | GCTGTAAAAATTCAATAAAT+TGG | - | chr3.4:80236859-80236878 | None:intergenic | 20.0% |
| !! | TTAGCTAATTTAAAAGCTTA+TGG | + | chr3.4:80234919-80234938 | MS.gene067043:intron | 20.0% |
| !! | TTTACATTTAGAAGGTTTAA+GGG | - | chr3.4:80236979-80236998 | None:intergenic | 20.0% |
| !!! | AATTATTGTTTGGCTTTTTT+TGG | - | chr3.4:80237317-80237336 | None:intergenic | 20.0% |
| !!! | TTTTGTCTAGTAATTGTAAT+AGG | + | chr3.4:80236576-80236595 | MS.gene067043:intron | 20.0% |
| ! | AAACCTTCCTAAATTATGAA+GGG | - | chr3.4:80236220-80236239 | None:intergenic | 25.0% |
| ! | AAGATCTATTGTTATGTATG+AGG | + | chr3.4:80235896-80235915 | MS.gene067043:intron | 25.0% |
| ! | AATCAAAAATAACTGCTAAC+AGG | - | chr3.4:80235983-80236002 | None:intergenic | 25.0% |
| ! | AATGAGTTCAATATCTCATA+TGG | + | chr3.4:80235820-80235839 | MS.gene067043:intron | 25.0% |
| ! | AATTTAATACCTGAAAATGG+GGG | - | chr3.4:80234303-80234322 | None:intergenic | 25.0% |
| ! | AATTTATGCTCTTCTTTCAA+TGG | - | chr3.4:80234004-80234023 | None:intergenic | 25.0% |
| ! | ACCAAAACTATAGAAATTTG+TGG | - | chr3.4:80235549-80235568 | None:intergenic | 25.0% |
| ! | ACTCTGCATAAATTATTGTT+TGG | - | chr3.4:80237327-80237346 | None:intergenic | 25.0% |
| ! | AGAGAAATACAAAAACTCAT+TGG | + | chr3.4:80237531-80237550 | MS.gene067043:CDS | 25.0% |
| ! | AGATCTATTGTTATGTATGA+GGG | + | chr3.4:80235897-80235916 | MS.gene067043:intron | 25.0% |
| ! | ATAAGAATGTTATGTTGGAT+AGG | - | chr3.4:80235215-80235234 | None:intergenic | 25.0% |
| ! | ATTTAAAAGCTTATGGTCTT+AGG | + | chr3.4:80234926-80234945 | MS.gene067043:intron | 25.0% |
| ! | ATTTGAAAATGTCTTTGCAT+CGG | + | chr3.4:80233831-80233850 | MS.gene067043:CDS | 25.0% |
| ! | CAATTACTAGACAAAACTTA+TGG | - | chr3.4:80236572-80236591 | None:intergenic | 25.0% |
| ! | CAGATATAAGAATGTTATGT+TGG | - | chr3.4:80235220-80235239 | None:intergenic | 25.0% |
| ! | CATATGATTATGACATTCTA+TGG | - | chr3.4:80234623-80234642 | None:intergenic | 25.0% |
| ! | CTTTACATTTAGAAGGTTTA+AGG | - | chr3.4:80236980-80236999 | None:intergenic | 25.0% |
| ! | CTTTGTTCTTTACATTTAGA+AGG | - | chr3.4:80236987-80237006 | None:intergenic | 25.0% |
| ! | GATGTCATAAATGTAGTAAT+TGG | - | chr3.4:80235961-80235980 | None:intergenic | 25.0% |
| ! | GTTATAAGACACATATTTAC+TGG | - | chr3.4:80234700-80234719 | None:intergenic | 25.0% |
| ! | TAAACCTTCCTAAATTATGA+AGG | - | chr3.4:80236221-80236240 | None:intergenic | 25.0% |
| ! | TATTCAAACAATGAGAAACA+CGG | - | chr3.4:80234279-80234298 | None:intergenic | 25.0% |
| ! | TCATAAACAATTTGCAAATG+AGG | - | chr3.4:80233686-80233705 | None:intergenic | 25.0% |
| ! | TCATTCTTGTCTATTATACA+CGG | - | chr3.4:80236438-80236457 | None:intergenic | 25.0% |
| ! | TTCCATGCATATGTTTAAAA+AGG | - | chr3.4:80235696-80235715 | None:intergenic | 25.0% |
| ! | TTTATGGGGAAAAATAGAAT+CGG | - | chr3.4:80235188-80235207 | None:intergenic | 25.0% |
| ! | TTTCTATTGATATGTCAAAC+AGG | + | chr3.4:80236154-80236173 | MS.gene067043:intron | 25.0% |
| !! | CTTCATAGTTTCAAGTAAAA+TGG | - | chr3.4:80236822-80236841 | None:intergenic | 25.0% |
| !! | GAACATTTAAAGTCAAACTA+TGG | - | chr3.4:80237568-80237587 | None:intergenic | 25.0% |
| !! | TTAGTTGATGTTGCATTATT+GGG | - | chr3.4:80234958-80234977 | None:intergenic | 25.0% |
| !! | TTTAGTTGATGTTGCATTAT+TGG | - | chr3.4:80234959-80234978 | None:intergenic | 25.0% |
| !! | TTTTCTTTCATTACATGTCT+CGG | + | chr3.4:80236897-80236916 | MS.gene067043:intron | 25.0% |
| !!! | AAACACTTCTAGAATGAAAT+TGG | - | chr3.4:80237034-80237053 | None:intergenic | 25.0% |
| !!! | AACAATATCACTGTTTTTTG+AGG | - | chr3.4:80233204-80233223 | None:intergenic | 25.0% |
| !!! | AATTTTCCTTTAAGCTTTAG+AGG | + | chr3.4:80235324-80235343 | MS.gene067043:intron | 25.0% |
| !!! | AGCTTTTTTATAAACAAGCT+CGG | - | chr3.4:80233404-80233423 | None:intergenic | 25.0% |
| !!! | CTTCTTTTACCTTTAACTTT+TGG | + | chr3.4:80235023-80235042 | MS.gene067043:intron | 25.0% |
| !!! | GAACAAACTGTAACTTTTTT+CGG | - | chr3.4:80235771-80235790 | None:intergenic | 25.0% |
| !!! | TCCTTTGAACTATTTGTTAT+CGG | - | chr3.4:80234172-80234191 | None:intergenic | 25.0% |
| !!! | TGAAAAGTATATCCTTTTCT+TGG | - | chr3.4:80234466-80234485 | None:intergenic | 25.0% |
| !!! | TTGATCAATCGTTTATTTTG+AGG | + | chr3.4:80233765-80233784 | MS.gene067043:CDS | 25.0% |
| !!! | TTTTTTCAACGAAAAAAGAG+CGG | - | chr3.4:80234358-80234377 | None:intergenic | 25.0% |
| AAATCTTGAATTGCTGTAGA+AGG | + | chr3.4:80237162-80237181 | MS.gene067043:intron | 30.0% | |
| AAGAAAAAATGACAGAACAC+TGG | - | chr3.4:80236884-80236903 | None:intergenic | 30.0% | |
| AAGACATACTATATTCTGTC+AGG | + | chr3.4:80236616-80236635 | MS.gene067043:intron | 30.0% | |
| AAGTGGAAAAGATGAAATGA+AGG | - | chr3.4:80235383-80235402 | None:intergenic | 30.0% | |
| AATTCAAGATTTAGACGCAT+AGG | - | chr3.4:80237154-80237173 | None:intergenic | 30.0% | |
| AGCTGTGACGATAAATAATT+AGG | + | chr3.4:80236462-80236481 | MS.gene067043:intron | 30.0% | |
| AGTATCATAAACTCTTCTCA+AGG | - | chr3.4:80236079-80236098 | None:intergenic | 30.0% | |
| AGTTGTAAGTATGTGTCTTA+AGG | - | chr3.4:80234524-80234543 | None:intergenic | 30.0% | |
| ATAAAGTATAGACGATTTGC+AGG | - | chr3.4:80236502-80236521 | None:intergenic | 30.0% | |
| ATTCCTAAAAAGTCCTCAAA+AGG | + | chr3.4:80233128-80233147 | MS.gene067043:CDS | 30.0% | |
| GACGAATCTAAATTTGACAT+GGG | - | chr3.4:80236752-80236771 | None:intergenic | 30.0% | |
| GATTATATGCATCAAGTGAA+TGG | + | chr3.4:80237260-80237279 | MS.gene067043:intron | 30.0% | |
| TACTAAGCATCTTAAGGAAA+AGG | + | chr3.4:80233460-80233479 | MS.gene067043:CDS | 30.0% | |
| TCTAATTCTTCTTTGAATGC+AGG | + | chr3.4:80233257-80233276 | MS.gene067043:CDS | 30.0% | |
| TGACGAATCTAAATTTGACA+TGG | - | chr3.4:80236753-80236772 | None:intergenic | 30.0% | |
| TGGATTACAACAAATAACCA+GGG | - | chr3.4:80234603-80234622 | None:intergenic | 30.0% | |
| TGTACTTTCACTTTCATCAA+TGG | - | chr3.4:80235470-80235489 | None:intergenic | 30.0% | |
| TGTGACGATAAATAATTAGG+TGG | + | chr3.4:80236465-80236484 | MS.gene067043:intron | 30.0% | |
| TTAATCTTGATGCAAGCTTA+AGG | + | chr3.4:80234838-80234857 | MS.gene067043:intron | 30.0% | |
| TTATTGCATTACTCAGTTTG+TGG | + | chr3.4:80234093-80234112 | MS.gene067043:CDS | 30.0% | |
| TTCAAATACTCTCTTTCTCT+AGG | - | chr3.4:80233818-80233837 | None:intergenic | 30.0% | |
| TTTCCTTAAGATGCTTAGTA+GGG | - | chr3.4:80233460-80233479 | None:intergenic | 30.0% | |
| TTTGAGAAAGATCCAACTTT+GGG | + | chr3.4:80237291-80237310 | MS.gene067043:intron | 30.0% | |
| ! | ACTGATATTGTCTTTGTTTC+AGG | + | chr3.4:80237409-80237428 | MS.gene067043:intron | 30.0% |
| ! | ACTTGCTGATACAATCATAA+GGG | + | chr3.4:80234129-80234148 | MS.gene067043:CDS | 30.0% |
| ! | AGAAGAGCATAAATTGTTTC+TGG | + | chr3.4:80234009-80234028 | MS.gene067043:CDS | 30.0% |
| ! | ATGGATTACAACAAATAACC+AGG | - | chr3.4:80234604-80234623 | None:intergenic | 30.0% |
| ! | CACCTTTTTAAACATATGCA+TGG | + | chr3.4:80235691-80235710 | MS.gene067043:intron | 30.0% |
| ! | CTCTCTTGTGCTATTAATTT+CGG | + | chr3.4:80234887-80234906 | MS.gene067043:intron | 30.0% |
| ! | CTTGAAGGTAATTTTTGTGT+TGG | + | chr3.4:80236275-80236294 | MS.gene067043:intron | 30.0% |
| ! | GCCACAAATTTCTATAGTTT+TGG | + | chr3.4:80235545-80235564 | MS.gene067043:intron | 30.0% |
| ! | TAATGGAATTGCTGAGTTTT+TGG | + | chr3.4:80233943-80233962 | MS.gene067043:CDS | 30.0% |
| ! | TATAAACAAGCTCGGTTTTT+CGG | - | chr3.4:80233396-80233415 | None:intergenic | 30.0% |
| ! | TGGAAATTTTCAGCTGTAAT+TGG | - | chr3.4:80235447-80235466 | None:intergenic | 30.0% |
| ! | TTGATTGATTTCCTGATGAA+AGG | - | chr3.4:80233884-80233903 | None:intergenic | 30.0% |
| ! | TTTTCCTTAAGATGCTTAGT+AGG | - | chr3.4:80233461-80233480 | None:intergenic | 30.0% |
| !! | AAAGTACCTCTAAAGCTTAA+AGG | - | chr3.4:80235333-80235352 | None:intergenic | 30.0% |
| !! | AACTTGCTGATACAATCATA+AGG | + | chr3.4:80234128-80234147 | MS.gene067043:CDS | 30.0% |
| !! | ATTTTTCAAACACCTTTTGC+AGG | - | chr3.4:80234803-80234822 | None:intergenic | 30.0% |
| !! | TAAAAGTGTTTGTAAGCTTG+TGG | + | chr3.4:80236252-80236271 | MS.gene067043:intron | 30.0% |
| !! | TTTTGAGAAAGATCCAACTT+TGG | + | chr3.4:80237290-80237309 | MS.gene067043:intron | 30.0% |
| !!! | AACTGTAACTTTTTTCGGAT+TGG | - | chr3.4:80235766-80235785 | None:intergenic | 30.0% |
| !!! | ACTGTAACTTTTTTCGGATT+GGG | - | chr3.4:80235765-80235784 | None:intergenic | 30.0% |
| AAAGAACAAAGCATGTGTCA+AGG | + | chr3.4:80236996-80237015 | MS.gene067043:intron | 35.0% | |
| AACATACAACTCCCATTGTA+GGG | + | chr3.4:80236010-80236029 | MS.gene067043:intron | 35.0% | |
| AAGAACAAAGCATGTGTCAA+GGG | + | chr3.4:80236997-80237016 | MS.gene067043:intron | 35.0% | |
| AATGCAAGAGGTTGTTAAGA+TGG | + | chr3.4:80233556-80233575 | MS.gene067043:CDS | 35.0% | |
| AATTATATGCAACAAGTCCC+TGG | + | chr3.4:80234583-80234602 | MS.gene067043:intron | 35.0% | |
| AATTTGTGGCATCGTTTCAA+AGG | - | chr3.4:80235535-80235554 | None:intergenic | 35.0% | |
| ACACATATTTACTGGAAACC+TGG | - | chr3.4:80234692-80234711 | None:intergenic | 35.0% | |
| ACATAAGATCAACTTCCTCT+AGG | - | chr3.4:80236346-80236365 | None:intergenic | 35.0% | |
| ACATTTGTGATTCCCAACAA+TGG | - | chr3.4:80235420-80235439 | None:intergenic | 35.0% | |
| ACCTTCTTACTCTATCAAGA+AGG | + | chr3.4:80235870-80235889 | MS.gene067043:intron | 35.0% | |
| ACTTTCACTTTCATCAATGG+TGG | - | chr3.4:80235467-80235486 | None:intergenic | 35.0% | |
| AGAATGTTATGTTGGATAGG+TGG | - | chr3.4:80235212-80235231 | None:intergenic | 35.0% | |
| AGTACGTCCCTTCATAATTT+AGG | + | chr3.4:80236210-80236229 | MS.gene067043:intron | 35.0% | |
| AGTGATATTGTTACACAACC+TGG | + | chr3.4:80233212-80233231 | MS.gene067043:CDS | 35.0% | |
| ATGAAGCTTTACCAGCATTT+AGG | + | chr3.4:80233357-80233376 | MS.gene067043:CDS | 35.0% | |
| CAAAAATCGTTCCTGAACTA+CGG | + | chr3.4:80234552-80234571 | MS.gene067043:intron | 35.0% | |
| CAAAGATACACTATCACTAG+TGG | - | chr3.4:80236720-80236739 | None:intergenic | 35.0% | |
| CATAAGATCAACTTCCTCTA+GGG | - | chr3.4:80236345-80236364 | None:intergenic | 35.0% | |
| CCATTGGAATTCTCATTCAT+AGG | - | chr3.4:80233323-80233342 | None:intergenic | 35.0% | |
| CCTATGAATGAGAATTCCAA+TGG | + | chr3.4:80233320-80233339 | MS.gene067043:CDS | 35.0% | |
| CTAAGCATGGCATACATAAA+AGG | - | chr3.4:80236946-80236965 | None:intergenic | 35.0% | |
| CTATTGTTATGTATGAGGGA+TGG | + | chr3.4:80235901-80235920 | MS.gene067043:intron | 35.0% | |
| CTTGCTGATACAATCATAAG+GGG | + | chr3.4:80234130-80234149 | MS.gene067043:CDS | 35.0% | |
| GCCGATAACAAATAGTTCAA+AGG | + | chr3.4:80234168-80234187 | MS.gene067043:CDS | 35.0% | |
| GGTAAAAGAAAATGAGCTTG+AGG | - | chr3.4:80234337-80234356 | None:intergenic | 35.0% | |
| GTGATATTGTTACACAACCT+GGG | + | chr3.4:80233213-80233232 | MS.gene067043:CDS | 35.0% | |
| GTTGATCTTATGTTCATCTG+AGG | + | chr3.4:80236353-80236372 | MS.gene067043:intron | 35.0% | |
| GTTGATGTCTTTATCTGAAG+AGG | + | chr3.4:80236537-80236556 | MS.gene067043:intron | 35.0% | |
| GTTTAGCAGCTTTCTATGAA+GGG | - | chr3.4:80234734-80234753 | None:intergenic | 35.0% | |
| GTTTGAGCAAGATGAATCAA+AGG | + | chr3.4:80237640-80237659 | MS.gene067043:CDS | 35.0% | |
| GTTTGATTAAGTTCACGATG+TGG | - | chr3.4:80237469-80237488 | None:intergenic | 35.0% | |
| TAACATACAACTCCCATTGT+AGG | + | chr3.4:80236009-80236028 | MS.gene067043:intron | 35.0% | |
| TAATAGCACAAGAGAGATGA+GGG | - | chr3.4:80234883-80234902 | None:intergenic | 35.0% | |
| TACTGAGAATGTAATGCAAG+AGG | + | chr3.4:80233544-80233563 | MS.gene067043:CDS | 35.0% | |
| TAGTAGAATCTTGTCCTATG+CGG | - | chr3.4:80235115-80235134 | None:intergenic | 35.0% | |
| TATATGCCAACCATTAAGAG+TGG | - | chr3.4:80234991-80235010 | None:intergenic | 35.0% | |
| TCAAAGGAAGTTATGTTCCT+AGG | + | chr3.4:80234184-80234203 | MS.gene067043:CDS | 35.0% | |
| TCCTAGTAACTTCACATTGA+AGG | + | chr3.4:80236034-80236053 | MS.gene067043:intron | 35.0% | |
| TCCTTCAATGTGAAGTTACT+AGG | - | chr3.4:80236038-80236057 | None:intergenic | 35.0% | |
| TCTATACACAGACTACATAG+AGG | - | chr3.4:80235584-80235603 | None:intergenic | 35.0% | |
| TGAAGCTTTACCAGCATTTA+GGG | + | chr3.4:80233358-80233377 | MS.gene067043:CDS | 35.0% | |
| TGAGTAATAGAGACATCATG+CGG | - | chr3.4:80237222-80237241 | None:intergenic | 35.0% | |
| TGATACATTGCTAAGCACTT+TGG | - | chr3.4:80234061-80234080 | None:intergenic | 35.0% | |
| TGTTTAGCAGCTTTCTATGA+AGG | - | chr3.4:80234735-80234754 | None:intergenic | 35.0% | |
| TTAATAGCACAAGAGAGATG+AGG | - | chr3.4:80234884-80234903 | None:intergenic | 35.0% | |
| TTGCTGATACAATCATAAGG+GGG | + | chr3.4:80234131-80234150 | MS.gene067043:CDS | 35.0% | |
| ! | AATGACTATCTTTTCCCTAG+AGG | + | chr3.4:80236328-80236347 | MS.gene067043:intron | 35.0% |
| ! | GATATTGTCTTTGTTTCAGG+TGG | + | chr3.4:80237412-80237431 | MS.gene067043:intron | 35.0% |
| ! | TCGTCTTTTGCATGGATTTT+TGG | + | chr3.4:80237104-80237123 | MS.gene067043:intron | 35.0% |
| ! | TGGTTGCTTTCTTCATTGAT+GGG | + | chr3.4:80237124-80237143 | MS.gene067043:intron | 35.0% |
| ! | TTGGTTGCTTTCTTCATTGA+TGG | + | chr3.4:80237123-80237142 | MS.gene067043:intron | 35.0% |
| ! | TTTACTGTTTTGTGTCTGCT+TGG | - | chr3.4:80235802-80235821 | None:intergenic | 35.0% |
| ! | TTTGAGACTGAGAAGCATAA+TGG | + | chr3.4:80233926-80233945 | MS.gene067043:CDS | 35.0% |
| ! | TTTTGTATTTCTCTCCAACG+CGG | - | chr3.4:80237525-80237544 | None:intergenic | 35.0% |
| !! | ATGTTGGATAGGTGGTTTTA+TGG | - | chr3.4:80235204-80235223 | None:intergenic | 35.0% |
| !! | ATTCTGGGGAGTATCATTAA+TGG | + | chr3.4:80233968-80233987 | MS.gene067043:CDS | 35.0% |
| !! | CTGAGTTTTTGGAAATTCTG+GGG | + | chr3.4:80233954-80233973 | MS.gene067043:CDS | 35.0% |
| !! | GAACCTTTTGAGGACTTTTT+AGG | - | chr3.4:80233134-80233153 | None:intergenic | 35.0% |
| !! | GAGCTATAGAAGCATTGATA+AGG | - | chr3.4:80235073-80235092 | None:intergenic | 35.0% |
| !! | GCTGAGTTTTTGGAAATTCT+GGG | + | chr3.4:80233953-80233972 | MS.gene067043:CDS | 35.0% |
| !! | TGCTGAGTTTTTGGAAATTC+TGG | + | chr3.4:80233952-80233971 | MS.gene067043:CDS | 35.0% |
| !!! | TCTATAGTTTTGGTCCTAAG+AGG | + | chr3.4:80235555-80235574 | MS.gene067043:intron | 35.0% |
| !!! | TGTTGGATAGGTGGTTTTAT+GGG | - | chr3.4:80235203-80235222 | None:intergenic | 35.0% |
| AACCCTATGGTTTCCATTGT+TGG | + | chr3.4:80235404-80235423 | MS.gene067043:intron | 40.0% | |
| AATAGCACAAGAGAGATGAG+GGG | - | chr3.4:80234882-80234901 | None:intergenic | 40.0% | |
| ACCATTAAGAGTGGTTTCAG+AGG | - | chr3.4:80234982-80235001 | None:intergenic | 40.0% | |
| ACCCTATGGTTTCCATTGTT+GGG | + | chr3.4:80235405-80235424 | MS.gene067043:intron | 40.0% | |
| AGAAAGCTGCTAAACATGCT+AGG | + | chr3.4:80234739-80234758 | MS.gene067043:intron | 40.0% | |
| AGTTACTAGGATCCCTACAA+TGG | - | chr3.4:80236025-80236044 | None:intergenic | 40.0% | |
| AGTTATGTTCCTAGGTGAGT+TGG | + | chr3.4:80234192-80234211 | MS.gene067043:CDS | 40.0% | |
| ATCTTGATGCAAGCTTAAGG+AGG | + | chr3.4:80234841-80234860 | MS.gene067043:intron | 40.0% | |
| ATGTCTTTGCATCGGATCTA+TGG | + | chr3.4:80233839-80233858 | MS.gene067043:CDS | 40.0% | |
| CAAGGACAGTTTCATAGTCA+TGG | + | chr3.4:80233281-80233300 | MS.gene067043:CDS | 40.0% | |
| CATATGGACTCATTTCAGCA+TGG | + | chr3.4:80235836-80235855 | MS.gene067043:intron | 40.0% | |
| CGTCCCTTCATAATTTAGGA+AGG | + | chr3.4:80236214-80236233 | MS.gene067043:intron | 40.0% | |
| CGTGAGAATAAGCTCATTGA+TGG | + | chr3.4:80233617-80233636 | MS.gene067043:CDS | 40.0% | |
| CTACTGCAATTTGCAAGACT+TGG | + | chr3.4:80237186-80237205 | MS.gene067043:intron | 40.0% | |
| CTGAAACCACTCTTAATGGT+TGG | + | chr3.4:80234982-80235001 | MS.gene067043:intron | 40.0% | |
| GAGCAAGATGAATCAAAGGA+AGG | + | chr3.4:80237644-80237663 | MS.gene067043:CDS | 40.0% | |
| GCCTTCTTGATAGAGTAAGA+AGG | - | chr3.4:80235874-80235893 | None:intergenic | 40.0% | |
| GGAGATTAAGAGACAAGCTT+TGG | + | chr3.4:80233481-80233500 | MS.gene067043:CDS | 40.0% | |
| GGCCATAATGAACAGAAAGT+CGG | - | chr3.4:80236417-80236436 | None:intergenic | 40.0% | |
| GGGATCGTAAAAACTAAGCA+TGG | - | chr3.4:80236959-80236978 | None:intergenic | 40.0% | |
| GGTTGGCATATAGTTCTTCT+TGG | + | chr3.4:80234999-80235018 | MS.gene067043:intron | 40.0% | |
| GTCTGTGTATAGACTTTCCT+TGG | + | chr3.4:80235591-80235610 | MS.gene067043:intron | 40.0% | |
| GTCTTTATCTGAAGAGGTGA+AGG | + | chr3.4:80236543-80236562 | MS.gene067043:intron | 40.0% | |
| GTTACTAGGATCCCTACAAT+GGG | - | chr3.4:80236024-80236043 | None:intergenic | 40.0% | |
| GTTACTTGCAGCTTTCTTTG+CGG | - | chr3.4:80237720-80237739 | None:intergenic | 40.0% | |
| GTTGTACGTGAGTGAATGTT+AGG | - | chr3.4:80235277-80235296 | None:intergenic | 40.0% | |
| TAAGGGGGTTATTGAAGTAC+TGG | + | chr3.4:80234146-80234165 | MS.gene067043:CDS | 40.0% | |
| TCAATGAGCTTATTCTCACG+CGG | - | chr3.4:80233617-80233636 | None:intergenic | 40.0% | |
| TCCCAACAATGGAAACCATA+GGG | - | chr3.4:80235409-80235428 | None:intergenic | 40.0% | |
| TCGGATCTATGGCAAGTTAA+TGG | + | chr3.4:80233850-80233869 | MS.gene067043:CDS | 40.0% | |
| TCTTCTTTGAATGCAGGACA+AGG | + | chr3.4:80233263-80233282 | MS.gene067043:CDS | 40.0% | |
| TGACCCTACTAAGCATCTTA+AGG | + | chr3.4:80233454-80233473 | MS.gene067043:CDS | 40.0% | |
| TTCCCAACAATGGAAACCAT+AGG | - | chr3.4:80235410-80235429 | None:intergenic | 40.0% | |
| TTTGTAAGCTTGTGGCTTGA+AGG | + | chr3.4:80236260-80236279 | MS.gene067043:intron | 40.0% | |
| TTTGTATTTCTCTCCAACGC+GGG | - | chr3.4:80237524-80237543 | None:intergenic | 40.0% | |
| ! | AAGCTTATGGTCTTAGGAGA+TGG | + | chr3.4:80234932-80234951 | MS.gene067043:intron | 40.0% |
| ! | ACGATTCTCAGAACCTTTTG+AGG | - | chr3.4:80233144-80233163 | None:intergenic | 40.0% |
| ! | ATTGTCTTTGTTTCAGGTGG+CGG | + | chr3.4:80237415-80237434 | MS.gene067043:intron | 40.0% |
| ! | TCTTTTCCACTTGAACCCTA+TGG | + | chr3.4:80235391-80235410 | MS.gene067043:intron | 40.0% |
| ! | TTTGAATAGCCCCCATTTTC+AGG | + | chr3.4:80234291-80234310 | MS.gene067043:CDS | 40.0% |
| !! | AAGCACTTTGGTTTGTGCAA+CGG | - | chr3.4:80234049-80234068 | None:intergenic | 40.0% |
| !! | AAGCTCGGTTTTTCGGAATT+CGG | - | chr3.4:80233389-80233408 | None:intergenic | 40.0% |
| !! | ACCTCTGAAACCACTCTTAA+TGG | + | chr3.4:80234978-80234997 | MS.gene067043:intron | 40.0% |
| !! | CATTGATGGCGTTGAATTAG+AGG | + | chr3.4:80233631-80233650 | MS.gene067043:CDS | 40.0% |
| !! | CTCTCTTTCTCTAGGATCTT+CGG | - | chr3.4:80233810-80233829 | None:intergenic | 40.0% |
| !! | TCTAGAAGTGTTTGCATGAC+TGG | + | chr3.4:80237041-80237060 | MS.gene067043:intron | 40.0% |
| !! | TGAGCTTGTTAACCCTAAGT+CGG | - | chr3.4:80235731-80235750 | None:intergenic | 40.0% |
| !! | TGCCGACTTTCTGTTCATTA+TGG | + | chr3.4:80236412-80236431 | MS.gene067043:intron | 40.0% |
| !!! | GTTGGATAGGTGGTTTTATG+GGG | - | chr3.4:80235202-80235221 | None:intergenic | 40.0% |
| !!! | TTTTTGAGGTTGCAACACCA+TGG | - | chr3.4:80233190-80233209 | None:intergenic | 40.0% |
| AATCTTGTCCTATGCGGTCT+GGG | - | chr3.4:80235109-80235128 | None:intergenic | 45.0% | |
| ACAATAGCACCATACATCGC+TGG | - | chr3.4:80234252-80234271 | None:intergenic | 45.0% | |
| ACATGCAAAAAGTCGTGCAG+AGG | - | chr3.4:80235938-80235957 | None:intergenic | 45.0% | |
| ACCATACATCGCTGGAATTC+TGG | - | chr3.4:80234244-80234263 | None:intergenic | 45.0% | |
| AGACTTCTTCCAACTCACCT+AGG | - | chr3.4:80234204-80234223 | None:intergenic | 45.0% | |
| ATACATCGCTGGAATTCTGG+AGG | - | chr3.4:80234241-80234260 | None:intergenic | 45.0% | |
| ATAGCACAAGAGAGATGAGG+GGG | - | chr3.4:80234881-80234900 | None:intergenic | 45.0% | |
| ATGCAAGCTTAAGGAGGTGA+GGG | + | chr3.4:80234847-80234866 | MS.gene067043:intron | 45.0% | |
| ATTGAGCAAGTCCGTAGTTC+AGG | - | chr3.4:80234566-80234585 | None:intergenic | 45.0% | |
| ATTTGCAAATGAGGCCACGA+AGG | - | chr3.4:80233677-80233696 | None:intergenic | 45.0% | |
| CAAAGCATGTGTCAAGGGAT+TGG | + | chr3.4:80237002-80237021 | MS.gene067043:intron | 45.0% | |
| CTACATAGAGGCTTCCTCTT+AGG | - | chr3.4:80235572-80235591 | None:intergenic | 45.0% | |
| GCAGTGTTCTTGCCAAGAAA+AGG | + | chr3.4:80234451-80234470 | MS.gene067043:intron | 45.0% | |
| GGTGGAAATTCAAGAAGCCA+TGG | + | chr3.4:80233170-80233189 | MS.gene067043:CDS | 45.0% | |
| TCCAGAATTCCAGCGATGTA+TGG | + | chr3.4:80234240-80234259 | MS.gene067043:CDS | 45.0% | |
| TCCAGTTCCTTCATGACCAA+TGG | + | chr3.4:80237354-80237373 | MS.gene067043:intron | 45.0% | |
| TCCATTGGTCATGAAGGAAC+TGG | - | chr3.4:80237358-80237377 | None:intergenic | 45.0% | |
| TCTGAGAATCGTGAACAAGG+TGG | + | chr3.4:80233152-80233171 | MS.gene067043:CDS | 45.0% | |
| TGGAAACCATAGGGTTCAAG+TGG | - | chr3.4:80235400-80235419 | None:intergenic | 45.0% | |
| TTCGGAACATCCCTAAATGC+TGG | - | chr3.4:80233371-80233390 | None:intergenic | 45.0% | |
| TTGTGTCTGCTTGGTCATCA+AGG | - | chr3.4:80235793-80235812 | None:intergenic | 45.0% | |
| ! | AAGGAGTACAGTCAGATTCC+AGG | + | chr3.4:80234671-80234690 | MS.gene067043:intron | 45.0% |
| ! | AGGTGAGTTGGAAGAAGTCT+TGG | + | chr3.4:80234204-80234223 | MS.gene067043:CDS | 45.0% |
| ! | ATTTGTTGCATCACCTGAGC+TGG | + | chr3.4:80233718-80233737 | MS.gene067043:CDS | 45.0% |
| ! | TCAAACACCTTTTGCAGGCA+GGG | - | chr3.4:80234798-80234817 | None:intergenic | 45.0% |
| ! | TGATGGCGTTGAATTAGAGG+AGG | + | chr3.4:80233634-80233653 | MS.gene067043:CDS | 45.0% |
| ! | TTACCAGTTTTGCTACTCCC+AGG | - | chr3.4:80233233-80233252 | None:intergenic | 45.0% |
| ! | TTCAAACACCTTTTGCAGGC+AGG | - | chr3.4:80234799-80234818 | None:intergenic | 45.0% |
| !! | CGGAAAGAGCTTTGTTCTTG+TGG | + | chr3.4:80237435-80237454 | MS.gene067043:CDS | 45.0% |
| !! | GGTTCTGAGAATCGTGAACA+AGG | + | chr3.4:80233149-80233168 | MS.gene067043:CDS | 45.0% |
| !!! | GGCTTTTTTTGGCCCAAAGT+TGG | - | chr3.4:80237306-80237325 | None:intergenic | 45.0% |
| AACACAGCGAAACTGCTCCA+AGG | - | chr3.4:80235611-80235630 | None:intergenic | 50.0% | |
| AAGGAAGGTGAAGTGACAGC+AGG | + | chr3.4:80237659-80237678 | MS.gene067043:CDS | 50.0% | |
| ACCCTAAGTCGGAAAGCAGT+AGG | - | chr3.4:80235720-80235739 | None:intergenic | 50.0% | |
| ACCCTACTGCTTTCCGACTT+AGG | + | chr3.4:80235715-80235734 | MS.gene067043:intron | 50.0% | |
| ACCTGAGCTGGATGCAAAGT+TGG | + | chr3.4:80233730-80233749 | MS.gene067043:CDS | 50.0% | |
| AGCTTATTCTCACGCGGTTG+AGG | - | chr3.4:80233611-80233630 | None:intergenic | 50.0% | |
| AGGAAGGTGAAGTGACAGCA+GGG | + | chr3.4:80237660-80237679 | MS.gene067043:CDS | 50.0% | |
| CAACCTGGGAGTAGCAAAAC+TGG | + | chr3.4:80233227-80233246 | MS.gene067043:CDS | 50.0% | |
| CATTGCAACTGCAGCTCCAT+TGG | - | chr3.4:80237373-80237392 | None:intergenic | 50.0% | |
| CCCTAAGTCGGAAAGCAGTA+GGG | - | chr3.4:80235719-80235738 | None:intergenic | 50.0% | |
| CCCTACTGCTTTCCGACTTA+GGG | + | chr3.4:80235716-80235735 | MS.gene067043:intron | 50.0% | |
| GAATCTTGTCCTATGCGGTC+TGG | - | chr3.4:80235110-80235129 | None:intergenic | 50.0% | |
| GATGCAAGCTTAAGGAGGTG+AGG | + | chr3.4:80234846-80234865 | MS.gene067043:intron | 50.0% | |
| GCAAAAAGTCGTGCAGAGGA+GGG | - | chr3.4:80235934-80235953 | None:intergenic | 50.0% | |
| TCCAACGCGGGAAAGATGAT+GGG | - | chr3.4:80237512-80237531 | None:intergenic | 50.0% | |
| TCCAGGTCAGGAAACAGTCA+GGG | + | chr3.4:80235645-80235664 | MS.gene067043:intron | 50.0% | |
| TGCAAAAAGTCGTGCAGAGG+AGG | - | chr3.4:80235935-80235954 | None:intergenic | 50.0% | |
| TGCAGCTCCATTGGTCATGA+AGG | - | chr3.4:80237364-80237383 | None:intergenic | 50.0% | |
| TTTCCTGACCTGGAGTGTGT+CGG | - | chr3.4:80235639-80235658 | None:intergenic | 50.0% | |
| ! | CAGGCAGGGTTTGGAGTAAA+AGG | - | chr3.4:80234784-80234803 | None:intergenic | 50.0% |
| ! | TGGCGTTGAATTAGAGGAGG+AGG | + | chr3.4:80233637-80233656 | MS.gene067043:CDS | 50.0% |
| ! | TGGTGCATCGACCTTTCATC+AGG | + | chr3.4:80233870-80233889 | MS.gene067043:CDS | 50.0% |
| AGCCACATGGAAACGCTTGG+AGG | + | chr3.4:80237688-80237707 | MS.gene067043:CDS | 55.0% | |
| AGCCTTCGATGGATCCTTCG+TGG | + | chr3.4:80233660-80233679 | MS.gene067043:CDS | 55.0% | |
| AGCTTAAGGAGGTGAGGGTG+AGG | + | chr3.4:80234852-80234871 | MS.gene067043:intron | 55.0% | |
| CACATGGAAACGCTTGGAGG+AGG | + | chr3.4:80237691-80237710 | MS.gene067043:CDS | 55.0% | |
| CATTTGTGCCCAGACCGCAT+AGG | + | chr3.4:80235098-80235117 | MS.gene067043:intron | 55.0% | |
| CGAAGCCACATGGAAACGCT+TGG | + | chr3.4:80237685-80237704 | MS.gene067043:CDS | 55.0% | |
| CTCCAAACCCTGCCTGCAAA+AGG | + | chr3.4:80234788-80234807 | MS.gene067043:intron | 55.0% | |
| CTCCAACGCGGGAAAGATGA+TGG | - | chr3.4:80237513-80237532 | None:intergenic | 55.0% | |
| CTCCAGGTCAGGAAACAGTC+AGG | + | chr3.4:80235644-80235663 | MS.gene067043:intron | 55.0% | |
| CTCCTCCAAGCGTTTCCATG+TGG | - | chr3.4:80237693-80237712 | None:intergenic | 55.0% | |
| GCACTACCTCGCAAATCTGC+AGG | + | chr3.4:80237761-80237780 | MS.gene067043:CDS | 55.0% | |
| GCCAACTTTGCATCCAGCTC+AGG | - | chr3.4:80233734-80233753 | None:intergenic | 55.0% | |
| GCTTAAGGAGGTGAGGGTGA+GGG | + | chr3.4:80234853-80234872 | MS.gene067043:intron | 55.0% | |
| TCCCATCATCTTTCCCGCGT+TGG | + | chr3.4:80237508-80237527 | MS.gene067043:CDS | 55.0% | |
| ! | CACCTTTTGCAGGCAGGGTT+TGG | - | chr3.4:80234793-80234812 | None:intergenic | 55.0% |
| AGAGGAGGAGGAGCCTTCGA+TGG | + | chr3.4:80233649-80233668 | MS.gene067043:CDS | 60.0% | |
| GCCCTGACTGTTTCCTGACC+TGG | - | chr3.4:80235649-80235668 | None:intergenic | 60.0% | |
| GGCCACGAAGGATCCATCGA+AGG | - | chr3.4:80233665-80233684 | None:intergenic | 60.0% | |
| GTTAGCTGCCGACACACTCC+AGG | + | chr3.4:80235628-80235647 | MS.gene067043:intron | 60.0% | |
| CTGCCGACACACTCCAGGTC+AGG | + | chr3.4:80235633-80235652 | MS.gene067043:intron | 65.0% | |
| CAGCAGGGCGCGAAGCCACA+TGG | + | chr3.4:80237675-80237694 | MS.gene067043:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80233104 | 80237787 | 80233104 | ID=MS.gene067043 |
| chr3.4 | mRNA | 80233104 | 80237787 | 80233104 | ID=MS.gene067043.t1;Parent=MS.gene067043 |
| chr3.4 | exon | 80233104 | 80234312 | 80233104 | ID=MS.gene067043.t1.exon1;Parent=MS.gene067043.t1 |
| chr3.4 | CDS | 80233104 | 80234312 | 80233104 | ID=cds.MS.gene067043.t1;Parent=MS.gene067043.t1 |
| chr3.4 | exon | 80237431 | 80237787 | 80237431 | ID=MS.gene067043.t1.exon2;Parent=MS.gene067043.t1 |
| chr3.4 | CDS | 80237431 | 80237787 | 80237431 | ID=cds.MS.gene067043.t1;Parent=MS.gene067043.t1 |
| Gene Sequence |
| Protein sequence |
