AlfalfaGEDB | MS.gene074100

M. sativa cultivar XinJiangDaYe / MS.gene074100

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9 PF13833.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074100.t1	XP_003618823.1	98.6	142	2	0	1	142	1	142	1.10E-73	285.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074100.t1	Q8RYJ8	55.1	138	58	2	8	141	7	144	4.3e-34	145.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074100.t1	G7KNL8	98.6	142	2	0	1	142	1	142	7.9e-74	285.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049567	MS.gene074100	0.815683	8.15E-52	-1.69E-46
MS.gene051490	MS.gene074100	0.818708	1.70E-52	-1.69E-46
MS.gene051492	MS.gene074100	0.80469	1.91E-49	-1.69E-46
MS.gene051541	MS.gene074100	0.803262	3.79E-49	-1.69E-46
MS.gene051831	MS.gene074100	0.817086	3.96E-52	-1.69E-46
MS.gene052464	MS.gene074100	0.817685	2.90E-52	-1.69E-46
MS.gene052493	MS.gene074100	0.830689	2.55E-55	-1.69E-46
MS.gene052586	MS.gene074100	0.823994	1.03E-53	-1.69E-46
MS.gene052685	MS.gene074100	0.811054	8.48E-51	-1.69E-46
MS.gene052686	MS.gene074100	0.822633	2.13E-53	-1.69E-46
MS.gene052889	MS.gene074100	0.801684	8.02E-49	-1.69E-46
MS.gene053094	MS.gene074100	0.835571	1.55E-56	-1.69E-46
MS.gene053298	MS.gene074100	0.845278	4.49E-59	-1.69E-46
MS.gene053340	MS.gene074100	0.802039	6.78E-49	-1.69E-46
MS.gene053643	MS.gene074100	0.828404	9.16E-55	-1.69E-46
MS.gene053963	MS.gene074100	0.845357	4.27E-59	-1.69E-46
MS.gene05410	MS.gene074100	0.841342	5.04E-58	-1.69E-46
MS.gene05414	MS.gene074100	0.803369	3.60E-49	-1.69E-46
MS.gene054222	MS.gene074100	0.834812	2.41E-56	-1.69E-46
MS.gene054236	MS.gene074100	0.811691	6.17E-51	-1.69E-46
MS.gene05423	MS.gene074100	0.822503	2.29E-53	-1.69E-46
MS.gene05425	MS.gene074100	0.820129	8.07E-53	-1.69E-46
MS.gene05427	MS.gene074100	0.82001	8.60E-53	-1.69E-46
MS.gene05439	MS.gene074100	0.852311	5.02E-61	-1.69E-46
MS.gene054479	MS.gene074100	0.812409	4.30E-51	-1.69E-46
MS.gene054576	MS.gene074100	0.829863	4.06E-55	-1.69E-46
MS.gene054892	MS.gene074100	0.841646	4.19E-58	-1.69E-46
MS.gene054893	MS.gene074100	0.838943	2.13E-57	-1.69E-46
MS.gene055147	MS.gene074100	0.825348	4.92E-54	-1.69E-46
MS.gene055148	MS.gene074100	0.810283	1.25E-50	-1.69E-46
MS.gene055149	MS.gene074100	0.808606	2.85E-50	-1.69E-46
MS.gene055222	MS.gene074100	0.807455	5.01E-50	-1.69E-46
MS.gene055226	MS.gene074100	0.824168	9.34E-54	-1.69E-46
MS.gene055442	MS.gene074100	0.812777	3.57E-51	-1.69E-46
MS.gene055827	MS.gene074100	0.816913	4.33E-52	-1.69E-46
MS.gene055864	MS.gene074100	0.817037	4.06E-52	-1.69E-46
MS.gene056638	MS.gene074100	0.807352	5.27E-50	-1.69E-46
MS.gene056779	MS.gene074100	0.808131	3.60E-50	-1.69E-46
MS.gene05761	MS.gene074100	0.809207	2.12E-50	-1.69E-46
MS.gene058159	MS.gene074100	0.812054	5.14E-51	-1.69E-46
MS.gene058429	MS.gene074100	0.825058	5.76E-54	-1.69E-46
MS.gene058592	MS.gene074100	0.806374	8.49E-50	-1.69E-46
MS.gene059170	MS.gene074100	0.839047	2.00E-57	-1.69E-46
MS.gene05952	MS.gene074100	0.816586	5.12E-52	-1.69E-46
MS.gene059774	MS.gene074100	0.841081	5.90E-58	-1.69E-46
MS.gene060012	MS.gene074100	0.805534	1.27E-49	-1.69E-46
MS.gene060259	MS.gene074100	0.822649	2.12E-53	-1.69E-46
MS.gene060373	MS.gene074100	0.819333	1.23E-52	-1.69E-46
MS.gene060412	MS.gene074100	0.882864	7.28E-71	-1.69E-46
MS.gene060413	MS.gene074100	0.815723	7.99E-52	-1.69E-46
MS.gene060520	MS.gene074100	0.834134	3.57E-56	-1.69E-46
MS.gene060697	MS.gene074100	0.841662	4.15E-58	-1.69E-46
MS.gene060840	MS.gene074100	0.831979	1.23E-55	-1.69E-46
MS.gene060851	MS.gene074100	0.806618	7.54E-50	-1.69E-46
MS.gene060852	MS.gene074100	0.806693	7.27E-50	-1.69E-46
MS.gene060932	MS.gene074100	0.818717	1.69E-52	-1.69E-46
MS.gene061047	MS.gene074100	0.853604	2.14E-61	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene074100	MS.gene64316	PPI
MS.gene21155	MS.gene074100	PPI
MS.gene074100	MS.gene061261	PPI
MS.gene074100	MS.gene03228	PPI
MS.gene21932	MS.gene074100	PPI
MS.gene074100	MS.gene46237	PPI
MS.gene074100	MS.gene64317	PPI
MS.gene05284	MS.gene074100	PPI
MS.gene074100	MS.gene63000	PPI
MS.gene074100	MS.gene93087	PPI
MS.gene074100	MS.gene64310	PPI
MS.gene041795	MS.gene074100	PPI
MS.gene074100	MS.gene29459	PPI
MS.gene074100	MS.gene057293	PPI
MS.gene074100	MS.gene71207	PPI
MS.gene22553	MS.gene074100	PPI
MS.gene074100	MS.gene92775	PPI
MS.gene074100	MS.gene09934	PPI
MS.gene070168	MS.gene074100	PPI
MS.gene074100	MS.gene53662	PPI
MS.gene074100	MS.gene053319	PPI
MS.gene074100	MS.gene000724	PPI
MS.gene038456	MS.gene074100	PPI
MS.gene052672	MS.gene074100	PPI
MS.gene074100	MS.gene21696	PPI
MS.gene004899	MS.gene074100	PPI
MS.gene074100	MS.gene074045	PPI
MS.gene074100	MS.gene85596	PPI
MS.gene074100	MS.gene96922	PPI
MS.gene074100	MS.gene80013	PPI
MS.gene25186	MS.gene074100	PPI
MS.gene074100	MS.gene025797	PPI
MS.gene074100	MS.gene64314	PPI
MS.gene074100	MS.gene025777	PPI
MS.gene070167	MS.gene074100	PPI
MS.gene074100	MS.gene94551	PPI
MS.gene04915	MS.gene074100	PPI
MS.gene074100	MS.gene046988	PPI
MS.gene074100	MS.gene53650	PPI
MS.gene074100	MS.gene066863	PPI
MS.gene074100	MS.gene02545	PPI
MS.gene074100	MS.gene04915	PPI
MS.gene074100	MS.gene58906	PPI
MS.gene074100	MS.gene79028	PPI
MS.gene68345	MS.gene074100	PPI
MS.gene074100	MS.gene64311	PPI
MS.gene001246	MS.gene074100	PPI
MS.gene040127	MS.gene074100	PPI
MS.gene62258	MS.gene074100	PPI
MS.gene074100	MS.gene026940	PPI
MS.gene000724	MS.gene074100	PPI
MS.gene074100	MS.gene65954	PPI
MS.gene64311	MS.gene074100	PPI
MS.gene074100	MS.gene28338	PPI
MS.gene074100	MS.gene21931	PPI
MS.gene074100	MS.gene87673	PPI
MS.gene074100	MS.gene53659	PPI
MS.gene074100	MS.gene09960	PPI
MS.gene020515	MS.gene074100	PPI
MS.gene80011	MS.gene074100	PPI
MS.gene074100	MS.gene061768	PPI
MS.gene58860	MS.gene074100	PPI
MS.gene074100	MS.gene64308	PPI
MS.gene64313	MS.gene074100	PPI
MS.gene83068	MS.gene074100	PPI
MS.gene27516	MS.gene074100	PPI
MS.gene62689	MS.gene074100	PPI
MS.gene074100	MS.gene017446	PPI
MS.gene97948	MS.gene074100	PPI
MS.gene61009	MS.gene074100	PPI
MS.gene64327	MS.gene074100	PPI
MS.gene000738	MS.gene074100	PPI
MS.gene64307	MS.gene074100	PPI
MS.gene074100	MS.gene96914	PPI
MS.gene074100	MS.gene066862	PPI
MS.gene074100	MS.gene96913	PPI
MS.gene04917	MS.gene074100	PPI
MS.gene074100	MS.gene015658	PPI
MS.gene46886	MS.gene074100	PPI
MS.gene026530	MS.gene074100	PPI
MS.gene074100	MS.gene93763	PPI
MS.gene074100	MS.gene64313	PPI
MS.gene074100	MS.gene80012	PPI
MS.gene074100	MS.gene024717	PPI
MS.gene074100	MS.gene036930	PPI
MS.gene074100	MS.gene21932	PPI
MS.gene074100	MS.gene026618	PPI
MS.gene008225	MS.gene074100	PPI
MS.gene056383	MS.gene074100	PPI
MS.gene074100	MS.gene53648	PPI
MS.gene074100	MS.gene008831	PPI
MS.gene64324	MS.gene074100	PPI
MS.gene074100	MS.gene55545	PPI
MS.gene074100	MS.gene056461	PPI
MS.gene015470	MS.gene074100	PPI
MS.gene074100	MS.gene98972	PPI
MS.gene024717	MS.gene074100	PPI
MS.gene074100	MS.gene89216	PPI
MS.gene53662	MS.gene074100	PPI
MS.gene074100	MS.gene009021	PPI
MS.gene074100	MS.gene47195	PPI
MS.gene003880	MS.gene074100	PPI
MS.gene54637	MS.gene074100	PPI
MS.gene67281	MS.gene074100	PPI
MS.gene074100	MS.gene63281	PPI
MS.gene074100	MS.gene07422	PPI
MS.gene062239	MS.gene074100	PPI
MS.gene074100	MS.gene013748	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074100.t1	MTR_6g023460	98.592	142	2	0	1	142	1	142	6.60e-100	283
MS.gene074100.t1	MTR_4g103655	60.448	134	53	0	8	141	6	139	1.76e-54	168
MS.gene074100.t1	MTR_4g103650	59.701	134	54	0	8	141	2	135	1.06e-53	166
MS.gene074100.t1	MTR_4g103630	58.955	134	55	0	8	141	6	139	1.92e-53	165
MS.gene074100.t1	MTR_3g089070	56.835	139	60	0	3	141	1	139	1.23e-52	163
MS.gene074100.t1	MTR_3g089090	56.934	137	59	0	5	141	2	138	1.57e-52	163
MS.gene074100.t1	MTR_8g078270	53.383	133	57	3	12	141	57	187	2.25e-39	131
MS.gene074100.t1	MTR_1g046950	42.754	138	68	2	11	141	7	140	8.20e-33	113
MS.gene074100.t1	MTR_5g079340	43.609	133	71	2	11	141	7	137	9.88e-33	112
MS.gene074100.t1	MTR_3g067610	42.748	131	72	1	11	141	8	135	2.48e-31	109
MS.gene074100.t1	MTR_8g107110	41.538	130	76	0	12	141	28	157	2.94e-29	104
MS.gene074100.t1	MTR_1g047100	40.876	137	71	2	11	141	7	139	3.16e-29	103
MS.gene074100.t1	MTR_4g067270	38.060	134	80	2	11	141	8	141	4.55e-26	96.3
MS.gene074100.t1	MTR_8g105230	41.406	128	74	1	12	138	40	167	9.32e-26	96.7
MS.gene074100.t1	MTR_6g079570	40.909	132	77	1	11	141	29	160	2.30e-25	95.1
MS.gene074100.t1	MTR_1g032070	38.346	133	81	1	11	142	49	181	8.66e-25	94.4
MS.gene074100.t1	MTR_7g075040	38.000	150	81	4	3	141	42	190	4.55e-23	89.7
MS.gene074100.t1	MTR_5g008705	38.168	131	72	2	16	141	2	128	3.26e-22	85.9
MS.gene074100.t1	MTR_8g036075	35.664	143	83	3	8	141	49	191	5.28e-22	87.0
MS.gene074100.t1	MTR_8g066630	31.884	138	90	1	4	137	13	150	6.45e-22	85.9
MS.gene074100.t1	MTR_5g017550	33.588	131	87	0	12	142	52	182	1.38e-21	85.9
MS.gene074100.t1	MTR_1g076650	32.857	140	93	1	4	142	8	147	2.30e-21	84.3
MS.gene074100.t1	MTR_1g076650	40.299	67	40	0	75	141	7	73	1.94e-11	58.5
MS.gene074100.t1	MTR_5g017510	34.848	132	85	1	12	142	52	183	8.93e-21	83.6
MS.gene074100.t1	MTR_5g017560	34.848	132	85	1	12	142	52	183	8.93e-21	83.6
MS.gene074100.t1	MTR_7g087610	29.286	140	98	1	4	142	8	147	1.56e-20	82.0
MS.gene074100.t1	MTR_4g086260	34.615	130	84	1	12	141	61	189	2.95e-20	82.4
MS.gene074100.t1	MTR_7g089760	34.328	134	85	2	11	141	8	141	1.52e-19	79.7
MS.gene074100.t1	MTR_1g041285	32.143	140	94	1	4	142	8	147	1.58e-19	79.3
MS.gene074100.t1	MTR_6g025320	28.571	140	99	1	4	142	8	147	4.98e-19	78.2
MS.gene074100.t1	MTR_1g071150	27.465	142	103	0	1	142	5	146	5.83e-19	77.8
MS.gene074100.t1	MTR_5g088320	27.857	140	100	1	4	142	8	147	2.77e-18	76.3
MS.gene074100.t1	MTR_4g112460	29.577	142	97	1	3	141	6	147	5.21e-18	75.9
MS.gene074100.t1	MTR_4g115170	36.000	150	77	3	11	141	67	216	3.90e-17	75.1
MS.gene074100.t1	MTR_2g098890	33.824	136	85	2	11	141	67	202	4.57e-17	74.3
MS.gene074100.t1	MTR_5g027000	29.078	141	99	1	2	141	16	156	1.15e-16	72.4
MS.gene074100.t1	MTR_5g008695	34.783	115	64	2	33	140	2	112	2.96e-16	70.1
MS.gene074100.t1	MTR_8g069915	27.660	141	99	1	4	141	8	148	7.19e-16	70.5
MS.gene074100.t1	MTR_7g074240	32.639	144	84	2	11	141	27	170	7.64e-16	70.5
MS.gene074100.t1	MTR_3g083470	32.331	133	79	3	11	142	96	218	1.18e-15	71.2
MS.gene074100.t1	MTR_1g030440	35.211	142	75	3	12	142	26	161	2.47e-15	68.9
MS.gene074100.t1	MTR_1g026190	28.571	133	90	2	11	141	390	519	1.80e-13	66.6
MS.gene074100.t1	MTR_5g089320	29.323	133	89	2	11	141	376	505	4.45e-13	65.5
MS.gene074100.t1	MTR_7g090450	30.464	151	91	4	1	141	66	212	5.48e-13	63.9
MS.gene074100.t1	MTR_5g079470	42.857	63	35	1	11	73	13	74	3.35e-12	58.9
MS.gene074100.t1	MTR_6g007613	30.534	131	90	1	12	141	33	163	4.27e-12	60.5
MS.gene074100.t1	MTR_5g009830	28.788	132	89	2	12	141	375	503	5.91e-12	62.4
MS.gene074100.t1	MTR_5g092810	29.545	132	88	2	12	141	401	529	1.10e-11	61.6
MS.gene074100.t1	MTR_8g099095	29.545	132	88	2	12	141	375	503	1.12e-11	61.2
MS.gene074100.t1	MTR_7g074020	29.771	131	91	1	12	141	34	164	1.32e-11	59.3
MS.gene074100.t1	MTR_3g051770	27.941	136	92	1	12	141	392	527	2.81e-11	60.5
MS.gene074100.t1	MTR_0168s0120	27.523	109	78	1	35	142	3	111	2.95e-11	57.0
MS.gene074100.t1	MTR_6g025320	27.523	109	78	1	35	142	3	111	2.95e-11	57.0
MS.gene074100.t1	MTR_3g088655	32.258	155	80	5	7	142	7	155	3.89e-11	57.8
MS.gene074100.t1	MTR_7g068710	28.462	130	93	0	12	141	365	494	9.10e-11	58.9
MS.gene074100.t1	MTR_0028s0170	28.788	132	89	2	12	141	387	515	9.47e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074100.t1	AT1G76640	50.376	133	63	1	12	141	26	158	1.21e-40	133
MS.gene074100.t1	AT1G76650	48.551	138	71	0	4	141	39	176	2.68e-40	133
MS.gene074100.t1	AT1G76650	48.551	138	71	0	4	141	39	176	2.68e-40	133
MS.gene074100.t1	AT3G50770	47.445	137	66	2	11	141	67	203	1.82e-37	127
MS.gene074100.t1	AT5G42380	49.275	138	68	1	6	141	47	184	4.55e-37	125
MS.gene074100.t1	AT3G01830	47.887	142	69	3	3	141	6	145	3.75e-36	122
MS.gene074100.t1	AT1G76650	44.203	138	67	1	4	141	39	166	9.32e-34	116
MS.gene074100.t1	AT5G37770	42.647	136	73	1	11	141	20	155	5.11e-31	109
MS.gene074100.t1	AT5G37770	42.647	136	73	1	11	141	20	155	5.11e-31	109
MS.gene074100.t1	AT1G66400	40.000	135	78	1	11	142	18	152	1.50e-28	102
MS.gene074100.t1	AT1G24620	41.985	131	75	1	12	141	41	171	9.64e-27	99.0
MS.gene074100.t1	AT1G18210	38.168	131	78	1	11	141	26	153	4.35e-25	94.4
MS.gene074100.t1	AT1G18210	38.168	131	78	1	11	141	26	153	4.35e-25	94.4
MS.gene074100.t1	AT5G17470	38.060	134	78	2	12	141	6	138	6.08e-25	93.2
MS.gene074100.t1	AT1G05990	36.691	139	84	2	7	141	4	142	1.99e-24	92.0
MS.gene074100.t1	AT1G73630	36.641	131	80	1	11	141	23	150	5.71e-24	91.3
MS.gene074100.t1	AT2G43290	34.507	142	79	3	11	141	68	206	5.79e-22	87.4
MS.gene074100.t1	AT4G03290	34.752	141	86	2	7	141	4	144	6.78e-22	85.9
MS.gene074100.t1	AT4G12860	37.313	134	81	2	11	141	8	141	1.40e-21	84.7
MS.gene074100.t1	AT3G59440	34.586	133	85	1	11	141	54	186	1.93e-21	85.5
MS.gene074100.t1	AT2G41100	31.579	152	86	1	4	137	62	213	7.74e-21	85.9
MS.gene074100.t1	AT2G41100	31.579	152	86	1	4	137	62	213	7.74e-21	85.9
MS.gene074100.t1	AT2G41100	31.579	152	86	1	4	137	62	213	7.74e-21	85.9
MS.gene074100.t1	AT2G36180	35.766	137	80	3	11	141	3	137	1.04e-20	82.4
MS.gene074100.t1	AT2G41100	31.579	152	86	1	4	137	97	248	1.28e-20	85.9
MS.gene074100.t1	AT2G41100	29.677	155	92	1	4	141	8	162	5.80e-19	81.3
MS.gene074100.t1	AT2G41100	31.579	152	86	1	4	137	97	248	1.28e-20	85.9
MS.gene074100.t1	AT2G41100	29.677	155	92	1	4	141	8	162	5.80e-19	81.3
MS.gene074100.t1	AT2G15680	34.058	138	86	2	6	141	48	182	1.97e-20	82.8
MS.gene074100.t1	AT3G07490	35.821	134	83	2	11	141	8	141	3.05e-20	81.6
MS.gene074100.t1	AT4G14640	31.973	147	91	2	1	142	6	148	1.15e-19	80.1
MS.gene074100.t1	AT3G22930	29.371	143	100	1	1	142	28	170	2.24e-19	79.7
MS.gene074100.t1	AT5G21274	29.286	140	98	1	4	142	8	147	2.51e-19	79.0
MS.gene074100.t1	AT3G56800	28.571	140	99	1	4	142	8	147	3.86e-19	78.6
MS.gene074100.t1	AT2G27030	28.571	140	99	1	4	142	8	147	3.86e-19	78.6
MS.gene074100.t1	AT2G41110	28.571	140	99	1	4	142	8	147	3.86e-19	78.6
MS.gene074100.t1	AT3G43810	28.571	140	99	1	4	142	8	147	5.21e-19	78.2
MS.gene074100.t1	AT3G01830	43.750	112	56	3	3	110	6	114	6.07e-19	77.8
MS.gene074100.t1	AT5G37780	27.857	140	100	1	4	142	8	147	7.43e-19	77.8
MS.gene074100.t1	AT1G66410	27.857	140	100	1	4	142	8	147	7.43e-19	77.8
MS.gene074100.t1	AT2G27030	28.571	140	99	1	4	142	8	147	1.33e-18	77.8
MS.gene074100.t1	AT3G43810	28.571	140	99	1	4	142	8	147	2.79e-18	77.8
MS.gene074100.t1	AT1G18530	30.496	141	95	2	4	141	3	143	6.08e-18	75.5
MS.gene074100.t1	AT3G50360	33.588	131	86	1	12	141	31	161	1.82e-17	74.7
MS.gene074100.t1	AT3G03400	34.109	129	76	4	12	134	9	134	2.13e-17	73.6
MS.gene074100.t1	AT1G32250	28.369	141	94	2	4	137	12	152	1.53e-16	72.4
MS.gene074100.t1	AT2G41110	26.316	152	99	2	4	142	8	159	4.64e-16	70.9
MS.gene074100.t1	AT3G25600	28.369	141	98	2	4	141	8	148	1.30e-15	69.7
MS.gene074100.t1	AT4G37010	30.534	131	90	1	12	141	35	165	3.04e-15	68.9
MS.gene074100.t1	AT4G37010	30.534	131	90	1	12	141	31	161	3.13e-15	68.9
MS.gene074100.t1	AT3G10190	29.412	136	94	2	8	141	70	205	3.14e-15	69.7
MS.gene074100.t1	AT5G37780	25.161	155	100	2	4	142	8	162	8.15e-15	67.8
MS.gene074100.t1	AT3G51920	27.857	140	100	1	4	142	8	147	1.49e-14	66.6
MS.gene074100.t1	AT3G03000	29.412	136	94	1	4	137	16	151	2.72e-14	66.2
MS.gene074100.t1	AT4G14640	31.746	126	77	2	22	142	9	130	6.74e-14	64.7
MS.gene074100.t1	AT2G41410	30.769	143	95	3	4	142	66	208	1.23e-13	65.5
MS.gene074100.t1	AT5G37780	27.869	122	87	1	22	142	13	134	1.82e-13	63.5
MS.gene074100.t1	AT3G03410	30.303	132	84	1	11	142	5	128	1.95e-13	63.2
MS.gene074100.t1	AT2G41090	25.362	138	101	1	5	142	9	144	2.77e-13	64.3
MS.gene074100.t1	AT1G66410	27.869	122	87	1	22	142	36	157	2.90e-13	63.5
MS.gene074100.t1	AT5G37780	27.869	122	87	1	22	142	52	173	3.06e-13	63.9
MS.gene074100.t1	AT4G04695	28.462	130	92	1	12	141	340	468	8.43e-13	64.7
MS.gene074100.t1	AT1G76040	31.579	133	86	2	11	141	181	310	3.41e-12	62.8
MS.gene074100.t1	AT1G76040	31.579	133	86	2	11	141	181	310	3.41e-12	62.8
MS.gene074100.t1	AT4G20780	30.921	152	84	3	11	141	32	183	4.08e-12	61.2
MS.gene074100.t1	AT1G76040	31.579	133	86	2	11	141	419	548	6.65e-12	62.0
MS.gene074100.t1	AT2G31500	29.078	141	97	2	4	141	367	507	6.82e-12	62.0
MS.gene074100.t1	AT3G51850	31.579	133	85	3	12	141	363	492	8.29e-12	62.0
MS.gene074100.t1	AT1G66410	27.523	109	78	1	35	142	3	111	9.18e-12	58.5
MS.gene074100.t1	AT1G66410	27.523	109	78	1	35	142	3	111	9.18e-12	58.5
MS.gene074100.t1	AT1G74740	30.597	134	85	3	12	141	368	497	1.62e-11	60.8
MS.gene074100.t1	AT1G12310	30.496	141	93	2	4	142	9	146	2.57e-11	58.2
MS.gene074100.t1	AT4G04700	29.545	132	88	2	12	141	340	468	2.67e-11	60.5
MS.gene074100.t1	AT5G12180	31.061	132	86	2	12	141	382	510	2.77e-11	60.5
MS.gene074100.t1	AT3G43810	27.523	109	78	1	35	142	3	111	3.09e-11	57.0
MS.gene074100.t1	AT3G43810	27.523	109	78	1	35	142	3	111	3.09e-11	57.0
MS.gene074100.t1	AT1G18890	29.008	131	91	2	12	141	372	501	3.91e-11	60.1
MS.gene074100.t1	AT2G41100	38.806	67	41	0	75	141	7	73	5.02e-11	57.4
MS.gene074100.t1	AT4G23650	29.545	132	88	2	12	141	387	515	5.50e-11	59.3
MS.gene074100.t1	AT5G19360	30.303	132	87	2	12	141	377	505	5.70e-11	59.3
MS.gene074100.t1	AT2G41100	31.731	104	53	1	52	137	20	123	6.76e-11	57.8
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT4G04740	29.630	135	84	4	12	141	377	505	7.61e-11	58.9
MS.gene074100.t1	AT5G12480	30.000	130	90	1	13	141	275	404	8.41e-11	58.9
MS.gene074100.t1	AT5G44460	31.724	145	84	5	11	141	31	174	8.87e-11	57.4
MS.gene074100.t1	AT1G62820	29.787	141	94	2	4	142	9	146	9.26e-11	56.6

Find 42 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCATTCTCTTAAGACTATT+TGG	0.187695	6.1:+7014072	None:intergenic
TTCAACCACTTTGATGAAAA+TGG	0.221308	6.1:-7014327	MS.gene074100:CDS
ATTTCTCAATTTGACATTGA+TGG	0.261073	6.1:-7014003	MS.gene074100:CDS
TGCCTCCTCGTTCGACATCT+TGG	0.325740	6.1:+7014251	None:intergenic
TAAGAGAATGCTTGGAAGAT+TGG	0.354871	6.1:-7014061	MS.gene074100:CDS
CGGCAGTGTGTGGAGGCAAT+CGG	0.365438	6.1:-7014276	MS.gene074100:CDS
TCGGACGGGGATGGGTTGAT+TGG	0.375255	6.1:-7014204	MS.gene074100:CDS
CAATTTGACATTGATGGAGA+TGG	0.399838	6.1:-7013997	MS.gene074100:CDS
GGCAGTGTGTGGAGGCAATC+GGG	0.408198	6.1:-7014275	MS.gene074100:CDS
TTCTCGACTCGGACGGGGAT+GGG	0.410804	6.1:-7014212	MS.gene074100:CDS
ACATCTTAAAAGCCTCTCTT+AGG	0.415131	6.1:+7014124	None:intergenic
AAGAGAATGCTTGGAAGATT+GGG	0.420123	6.1:-7014060	MS.gene074100:CDS
GTCGAACGAGGAGGCAGAAA+TGG	0.424698	6.1:-7014244	MS.gene074100:CDS
ATTTGTAGAGGGAGGGAAAG+AGG	0.428737	6.1:-7014163	MS.gene074100:CDS
CGGACGGGGATGGGTTGATT+GGG	0.435550	6.1:-7014203	MS.gene074100:CDS
TTGAGCTTCTCGACTCGGAC+GGG	0.442068	6.1:-7014218	MS.gene074100:CDS
AATAGTCTTAAGAGAATGCT+TGG	0.452529	6.1:-7014069	MS.gene074100:CDS
TTCGGAGCTGCGGCAGTGTG+TGG	0.473104	6.1:-7014286	MS.gene074100:CDS
TCCTAAATTCATCAAAACTA+AGG	0.475085	6.1:+7013971	None:intergenic
CGGGGATGGGTTGATTGGGT+TGG	0.475109	6.1:-7014199	MS.gene074100:CDS
CTTCTCGACTCGGACGGGGA+TGG	0.478951	6.1:-7014213	MS.gene074100:CDS
AATTTGACATTGATGGAGAT+GGG	0.498825	6.1:-7013996	MS.gene074100:CDS
TTTAAGATGTATGAAATGGA+GGG	0.506259	6.1:-7014111	MS.gene074100:CDS
AGATGGCAAAATATCATCTT+CGG	0.514454	6.1:-7014304	MS.gene074100:CDS
GGCGGTTGAGCTTCTCGACT+CGG	0.522065	6.1:-7014223	MS.gene074100:CDS
TTGTGAAATTTGTAGAGGGA+GGG	0.526096	6.1:-7014170	MS.gene074100:CDS
TTTGTGAAATTTGTAGAGGG+AGG	0.537603	6.1:-7014171	MS.gene074100:CDS
GTTGAGCTTCTCGACTCGGA+CGG	0.543058	6.1:-7014219	MS.gene074100:CDS
TGAGCTTCTCGACTCGGACG+GGG	0.549367	6.1:-7014217	MS.gene074100:CDS
CACTTTGATGAAAATGGAGA+TGG	0.550918	6.1:-7014321	MS.gene074100:CDS
GGAGCTGCGGCAGTGTGTGG+AGG	0.562399	6.1:-7014283	MS.gene074100:CDS
TATAGATATGGTCATGGACA+AGG	0.584911	6.1:-7014370	None:intergenic
ATGTATGAAATGGAGGGGTG+TGG	0.585987	6.1:-7014105	MS.gene074100:CDS
AAATTATATAGATATGGTCA+TGG	0.593913	6.1:-7014376	None:intergenic
TTAAGATGTATGAAATGGAG+GGG	0.595061	6.1:-7014110	MS.gene074100:CDS
GCAGTGTGTGGAGGCAATCG+GGG	0.597698	6.1:-7014274	MS.gene074100:CDS
GAAAGTGAATGACCTAAGAG+AGG	0.611956	6.1:-7014136	MS.gene074100:CDS
AAATATCATCTTCGGAGCTG+CGG	0.617493	6.1:-7014296	MS.gene074100:CDS
GAACGAGGAGGCAGAAATGG+CGG	0.627641	6.1:-7014241	MS.gene074100:CDS
ATTTGACATTGATGGAGATG+GGG	0.633515	6.1:-7013995	MS.gene074100:CDS
CGGGGCCAAGATGTCGAACG+AGG	0.661203	6.1:-7014256	MS.gene074100:CDS
GGCCAAGATGTCGAACGAGG+AGG	0.678288	6.1:-7014253	MS.gene074100:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTCTCAATTTGACATTGA+TGG	-	chr6.1:7014317-7014336	MS.gene074100:CDS	25.0%
!	TCCTAAATTCATCAAAACTA+AGG	+	chr6.1:7014352-7014371	None:intergenic	25.0%
!!	GATTTTGTGAAATTTGTAGA+GGG	-	chr6.1:7014146-7014165	MS.gene074100:CDS	25.0%
!!	TGATTTTGTGAAATTTGTAG+AGG	-	chr6.1:7014145-7014164	MS.gene074100:CDS	25.0%
!!	TTTAAGATGTATGAAATGGA+GGG	-	chr6.1:7014209-7014228	MS.gene074100:CDS	25.0%
!!!	TCCTTAGTTTTGATGAATTT+AGG	-	chr6.1:7014348-7014367	MS.gene074100:CDS	25.0%
!!!	TTTTAAGATGTATGAAATGG+AGG	-	chr6.1:7014208-7014227	MS.gene074100:CDS	25.0%
	AATTTGACATTGATGGAGAT+GGG	-	chr6.1:7014324-7014343	MS.gene074100:CDS	30.0%
	AGATGGCAAAATATCATCTT+CGG	-	chr6.1:7014016-7014035	MS.gene074100:CDS	30.0%
	AGCATTCTCTTAAGACTATT+TGG	+	chr6.1:7014251-7014270	None:intergenic	30.0%
	TTAAGATGTATGAAATGGAG+GGG	-	chr6.1:7014210-7014229	MS.gene074100:CDS	30.0%
	TTCAACCACTTTGATGAAAA+TGG	-	chr6.1:7013993-7014012	MS.gene074100:CDS	30.0%
!	AATAGTCTTAAGAGAATGCT+TGG	-	chr6.1:7014251-7014270	MS.gene074100:CDS	30.0%
!!!	GGCTTTTAAGATGTATGAAA+TGG	-	chr6.1:7014205-7014224	MS.gene074100:CDS	30.0%
	AAGAGAATGCTTGGAAGATT+GGG	-	chr6.1:7014260-7014279	MS.gene074100:CDS	35.0%
	ACATCTTAAAAGCCTCTCTT+AGG	+	chr6.1:7014199-7014218	None:intergenic	35.0%
	ATTTGACATTGATGGAGATG+GGG	-	chr6.1:7014325-7014344	MS.gene074100:CDS	35.0%
	CAATTTGACATTGATGGAGA+TGG	-	chr6.1:7014323-7014342	MS.gene074100:CDS	35.0%
	CACTTTGATGAAAATGGAGA+TGG	-	chr6.1:7013999-7014018	MS.gene074100:CDS	35.0%
	TAAGAGAATGCTTGGAAGAT+TGG	-	chr6.1:7014259-7014278	MS.gene074100:CDS	35.0%
	TTGTGAAATTTGTAGAGGGA+GGG	-	chr6.1:7014150-7014169	MS.gene074100:CDS	35.0%
	TTTGTGAAATTTGTAGAGGG+AGG	-	chr6.1:7014149-7014168	MS.gene074100:CDS	35.0%
!	CATCTCCATTTTCATCAAAG+TGG	+	chr6.1:7014001-7014020	None:intergenic	35.0%
	AAATATCATCTTCGGAGCTG+CGG	-	chr6.1:7014024-7014043	MS.gene074100:CDS	40.0%
	GAAAGTGAATGACCTAAGAG+AGG	-	chr6.1:7014184-7014203	MS.gene074100:CDS	40.0%
	ATGTATGAAATGGAGGGGTG+TGG	-	chr6.1:7014215-7014234	MS.gene074100:CDS	45.0%
	ATTTGTAGAGGGAGGGAAAG+AGG	-	chr6.1:7014157-7014176	MS.gene074100:CDS	45.0%
	GAACGAGGAGGCAGAAATGG+CGG	-	chr6.1:7014079-7014098	MS.gene074100:CDS	55.0%
	GTCGAACGAGGAGGCAGAAA+TGG	-	chr6.1:7014076-7014095	MS.gene074100:CDS	55.0%
	TGCCTCCTCGTTCGACATCT+TGG	+	chr6.1:7014072-7014091	None:intergenic	55.0%
!!	GTTGAGCTTCTCGACTCGGA+CGG	-	chr6.1:7014101-7014120	MS.gene074100:CDS	55.0%
!!	TTGAGCTTCTCGACTCGGAC+GGG	-	chr6.1:7014102-7014121	MS.gene074100:CDS	55.0%
	CGGCAGTGTGTGGAGGCAAT+CGG	-	chr6.1:7014044-7014063	MS.gene074100:CDS	60.0%
	GCAGTGTGTGGAGGCAATCG+GGG	-	chr6.1:7014046-7014065	MS.gene074100:CDS	60.0%
	GGCAGTGTGTGGAGGCAATC+GGG	-	chr6.1:7014045-7014064	MS.gene074100:CDS	60.0%
	GGCCAAGATGTCGAACGAGG+AGG	-	chr6.1:7014067-7014086	MS.gene074100:CDS	60.0%
	GGCGGTTGAGCTTCTCGACT+CGG	-	chr6.1:7014097-7014116	MS.gene074100:CDS	60.0%
!!	CGGACGGGGATGGGTTGATT+GGG	-	chr6.1:7014117-7014136	MS.gene074100:CDS	60.0%
!!	CGGGGATGGGTTGATTGGGT+TGG	-	chr6.1:7014121-7014140	MS.gene074100:CDS	60.0%
!!	TCGGACGGGGATGGGTTGAT+TGG	-	chr6.1:7014116-7014135	MS.gene074100:CDS	60.0%
!!	TGAGCTTCTCGACTCGGACG+GGG	-	chr6.1:7014103-7014122	MS.gene074100:CDS	60.0%
!!	TTCTCGACTCGGACGGGGAT+GGG	-	chr6.1:7014108-7014127	MS.gene074100:CDS	60.0%
	CGGGGCCAAGATGTCGAACG+AGG	-	chr6.1:7014064-7014083	MS.gene074100:CDS	65.0%
	TTCGGAGCTGCGGCAGTGTG+TGG	-	chr6.1:7014034-7014053	MS.gene074100:CDS	65.0%
!!	CTTCTCGACTCGGACGGGGA+TGG	-	chr6.1:7014107-7014126	MS.gene074100:CDS	65.0%
	GGAGCTGCGGCAGTGTGTGG+AGG	-	chr6.1:7014037-7014056	MS.gene074100:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	7013957	7014385	7013957	ID=MS.gene074100
chr6.1	mRNA	7013957	7014385	7013957	ID=MS.gene074100.t1;Parent=MS.gene074100
chr6.1	exon	7013957	7014385	7013957	ID=MS.gene074100.t1.exon1;Parent=MS.gene074100.t1
chr6.1	CDS	7013957	7014385	7013957	ID=cds.MS.gene074100.t1;Parent=MS.gene074100.t1

Gene Sequence

>MS.gene074100

ATGGTCATGGACAAGGTGACTCAATATATACGTGTGTTCAACCACTTTGATGAAAATGGAGATGGCAAAATATCATCTTCGGAGCTGCGGCAGTGTGTGGAGGCAATCGGGGCCAAGATGTCGAACGAGGAGGCAGAAATGGCGGTTGAGCTTCTCGACTCGGACGGGGATGGGTTGATTGGGTTGGATGATTTTGTGAAATTTGTAGAGGGAGGGAAAGAGGAAGAGAAAGTGAATGACCTAAGAGAGGCTTTTAAGATGTATGAAATGGAGGGGTGTGGTTGCATCACACCAAATAGTCTTAAGAGAATGCTTGGAAGATTGGGTGAGTGTAGAAGTATAGATGAATGTCAAGCTATGATTTCTCAATTTGACATTGATGGAGATGGGGTCCTTAGTTTTGATGAATTTAGGACAATGATGCTTTAA

Protein sequence

>MS.gene074100.t1

MVMDKVTQYIRVFNHFDENGDGKISSSELRQCVEAIGAKMSNEEAEMAVELLDSDGDGLIGLDDFVKFVEGGKEEEKVNDLREAFKMYEMEGCGCITPNSLKRMLGRLGECRSIDECQAMISQFDIDGDGVLSFDEFRTMML