Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28498.t1 | XP_003629506.1 | 92 | 188 | 15 | 0 | 1 | 188 | 1 | 188 | 1.80E-92 | 348.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28498.t1 | Q8L3R2 | 49.7 | 197 | 84 | 4 | 6 | 187 | 7 | 203 | 8.1e-41 | 168.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28498.t1 | G7LFJ5 | 92.0 | 188 | 15 | 0 | 1 | 188 | 1 | 188 | 1.3e-92 | 348.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene28498 | 0.834849 | 2.36E-56 | -1.69E-46 |
| MS.gene049230 | MS.gene28498 | 0.802351 | 5.85E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene28498 | 0.827389 | 1.61E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene28498 | 0.837718 | 4.41E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene28498 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene28498 | 0.817011 | 4.11E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene28498 | 0.812109 | 5.00E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene28498 | 0.802776 | 4.78E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene28498 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene28498 | 0.804468 | 2.13E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene28498 | 0.809256 | 2.07E-50 | -1.69E-46 |
| MS.gene050168 | MS.gene28498 | 0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene05016 | MS.gene28498 | 0.805841 | 1.10E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene28498 | 0.886098 | 4.60E-72 | -1.69E-46 |
| MS.gene050227 | MS.gene28498 | 0.891048 | 5.67E-74 | -1.69E-46 |
| MS.gene050228 | MS.gene28498 | 0.893503 | 5.91E-75 | -1.69E-46 |
| MS.gene050303 | MS.gene28498 | 0.83171 | 1.43E-55 | -1.69E-46 |
| MS.gene050330 | MS.gene28498 | -0.816517 | 5.31E-52 | -1.69E-46 |
| MS.gene050438 | MS.gene28498 | 0.825202 | 5.33E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene28498 | 0.868873 | 4.72E-66 | -1.69E-46 |
| MS.gene050558 | MS.gene28498 | 0.825771 | 3.91E-54 | -1.69E-46 |
| MS.gene050586 | MS.gene28498 | 0.806816 | 6.85E-50 | -1.69E-46 |
| MS.gene050605 | MS.gene28498 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene28498 | -0.865992 | 3.95E-65 | -1.69E-46 |
| MS.gene050642 | MS.gene28498 | 0.824801 | 6.63E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene28498 | 0.847339 | 1.23E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene28498 | 0.871605 | 6.02E-67 | -1.69E-46 |
| MS.gene050721 | MS.gene28498 | 0.870024 | 1.99E-66 | -1.69E-46 |
| MS.gene050724 | MS.gene28498 | 0.856189 | 3.81E-62 | -1.69E-46 |
| MS.gene050750 | MS.gene28498 | 0.832987 | 6.91E-56 | -1.69E-46 |
| MS.gene050759 | MS.gene28498 | 0.819875 | 9.23E-53 | -1.69E-46 |
| MS.gene050780 | MS.gene28498 | 0.891505 | 3.74E-74 | -1.69E-46 |
| MS.gene050807 | MS.gene28498 | 0.810454 | 1.14E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene28498 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene28498 | 0.839037 | 2.01E-57 | -1.69E-46 |
| MS.gene050824 | MS.gene28498 | 0.812749 | 3.63E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene28498 | 0.807791 | 4.25E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene28498 | 0.833696 | 4.60E-56 | -1.69E-46 |
| MS.gene050962 | MS.gene28498 | 0.807523 | 4.85E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene28498 | 0.802734 | 4.87E-49 | -1.69E-46 |
| MS.gene051207 | MS.gene28498 | 0.804476 | 2.12E-49 | -1.69E-46 |
| MS.gene051210 | MS.gene28498 | 0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene28498 | 0.810975 | 8.82E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene28498 | 0.841469 | 4.66E-58 | -1.69E-46 |
| MS.gene051344 | MS.gene28498 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene051349 | MS.gene28498 | 0.837223 | 5.90E-57 | -1.69E-46 |
| MS.gene051370 | MS.gene28498 | 0.824923 | 6.20E-54 | -1.69E-46 |
| MS.gene051452 | MS.gene28498 | 0.809998 | 1.43E-50 | -1.69E-46 |
| MS.gene051492 | MS.gene28498 | 0.805313 | 1.42E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene28498 | 0.824276 | 8.81E-54 | -1.69E-46 |
| MS.gene051757 | MS.gene28498 | 0.801643 | 8.17E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene28498 | 0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene051983 | MS.gene28498 | 0.847486 | 1.12E-59 | -1.69E-46 |
| MS.gene052012 | MS.gene28498 | 0.831842 | 1.33E-55 | -1.69E-46 |
| MS.gene052020 | MS.gene28498 | 0.843449 | 1.39E-58 | -1.69E-46 |
| MS.gene05215 | MS.gene28498 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene28498 | 0.858135 | 1.01E-62 | -1.69E-46 |
| MS.gene052190 | MS.gene28498 | 0.814494 | 1.50E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene28498 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene052286 | MS.gene28498 | 0.817038 | 4.06E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene28498 | 0.80982 | 1.57E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene28498 | -0.817666 | 2.93E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene28498 | 0.828221 | 1.01E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene28498 | 0.828913 | 6.90E-55 | -1.69E-46 |
| MS.gene052358 | MS.gene28498 | -0.811439 | 7.00E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene28498 | 0.829213 | 5.84E-55 | -1.69E-46 |
| MS.gene052384 | MS.gene28498 | 0.821192 | 4.60E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene28498 | 0.823034 | 1.72E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene28498 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene28498 | 0.800725 | 1.26E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene28498 | 0.808305 | 3.31E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene28498 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene052866 | MS.gene28498 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene28498 | 0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene052896 | MS.gene28498 | 0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene28498 | 0.820858 | 5.49E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene28498 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene053054 | MS.gene28498 | -0.827437 | 1.57E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene28498 | 0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene053085 | MS.gene28498 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene28498 | 0.837101 | 6.34E-57 | -1.69E-46 |
| MS.gene053184 | MS.gene28498 | 0.802783 | 4.76E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene28498 | 0.813608 | 2.35E-51 | -1.69E-46 |
| MS.gene053584 | MS.gene28498 | 0.823614 | 1.26E-53 | -1.69E-46 |
| MS.gene053630 | MS.gene28498 | 0.808377 | 3.19E-50 | -1.69E-46 |
| MS.gene053641 | MS.gene28498 | 0.815923 | 7.21E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene28498 | 0.819108 | 1.38E-52 | -1.69E-46 |
| MS.gene053960 | MS.gene28498 | 0.806698 | 7.25E-50 | -1.69E-46 |
| MS.gene053962 | MS.gene28498 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene053995 | MS.gene28498 | 0.80428 | 2.33E-49 | -1.69E-46 |
| MS.gene054083 | MS.gene28498 | 0.821527 | 3.85E-53 | -1.69E-46 |
| MS.gene054093 | MS.gene28498 | 0.805204 | 1.49E-49 | -1.69E-46 |
| MS.gene05410 | MS.gene28498 | 0.83372 | 4.53E-56 | -1.69E-46 |
| MS.gene05414 | MS.gene28498 | 0.86455 | 1.12E-64 | -1.69E-46 |
| MS.gene05415 | MS.gene28498 | 0.863132 | 3.10E-64 | -1.69E-46 |
| MS.gene054160 | MS.gene28498 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene05417 | MS.gene28498 | 0.815652 | 8.28E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene28498 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene28498 | 0.841935 | 3.51E-58 | -1.69E-46 |
| MS.gene05427 | MS.gene28498 | 0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene054291 | MS.gene28498 | -0.82996 | 3.84E-55 | -1.69E-46 |
| MS.gene054405 | MS.gene28498 | 0.822547 | 2.23E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene28498 | 0.803979 | 2.69E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene28498 | 0.830146 | 3.46E-55 | -1.69E-46 |
| MS.gene054559 | MS.gene28498 | 0.816329 | 5.85E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene28498 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene28498 | 0.816373 | 5.72E-52 | -1.69E-46 |
| MS.gene05468 | MS.gene28498 | 0.836387 | 9.64E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene28498 | 0.825663 | 4.15E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene28498 | 0.838519 | 2.74E-57 | -1.69E-46 |
| MS.gene05510 | MS.gene28498 | 0.847302 | 1.26E-59 | -1.69E-46 |
| MS.gene055166 | MS.gene28498 | 0.810917 | 9.08E-51 | -1.69E-46 |
| MS.gene055222 | MS.gene28498 | 0.851697 | 7.50E-61 | -1.69E-46 |
| MS.gene055227 | MS.gene28498 | 0.823202 | 1.57E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene28498 | 0.818813 | 1.61E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene28498 | 0.839712 | 1.34E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene28498 | 0.825663 | 4.15E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene28498 | 0.815241 | 1.02E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene28498 | 0.85448 | 1.20E-61 | -1.69E-46 |
| MS.gene055778 | MS.gene28498 | 0.825466 | 4.62E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene28498 | 0.841377 | 4.93E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene28498 | 0.821473 | 3.96E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene28498 | -0.805329 | 1.41E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene28498 | 0.82735 | 1.64E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene28498 | 0.86567 | 4.99E-65 | -1.69E-46 |
| MS.gene056552 | MS.gene28498 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene28498 | 0.808641 | 2.80E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene28498 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene28498 | 0.840271 | 9.61E-58 | -1.69E-46 |
| MS.gene057012 | MS.gene28498 | 0.808008 | 3.82E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene28498 | 0.830694 | 2.54E-55 | -1.69E-46 |
| MS.gene057060 | MS.gene28498 | 0.862072 | 6.57E-64 | -1.69E-46 |
| MS.gene057314 | MS.gene28498 | 0.80383 | 2.89E-49 | -1.69E-46 |
| MS.gene057395 | MS.gene28498 | 0.808049 | 3.75E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene28498 | 0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene28498 | 0.824791 | 6.67E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene28498 | 0.825059 | 5.76E-54 | -1.69E-46 |
| MS.gene057750 | MS.gene28498 | 0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene28498 | 0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene28498 | 0.836572 | 8.65E-57 | -1.69E-46 |
| MS.gene05795 | MS.gene28498 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene057967 | MS.gene28498 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene28498 | 0.808774 | 2.63E-50 | -1.69E-46 |
| MS.gene058084 | MS.gene28498 | 0.812697 | 3.72E-51 | -1.69E-46 |
| MS.gene058139 | MS.gene28498 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene058146 | MS.gene28498 | 0.843351 | 1.48E-58 | -1.69E-46 |
| MS.gene058168 | MS.gene28498 | 0.848574 | 5.62E-60 | -1.69E-46 |
| MS.gene058399 | MS.gene28498 | 0.820792 | 5.69E-53 | -1.69E-46 |
| MS.gene058426 | MS.gene28498 | 0.834373 | 3.11E-56 | -1.69E-46 |
| MS.gene058477 | MS.gene28498 | 0.80099 | 1.11E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene28498 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene058636 | MS.gene28498 | 0.804371 | 2.23E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene28498 | 0.8084 | 3.15E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene28498 | 0.826434 | 2.72E-54 | -1.69E-46 |
| MS.gene059006 | MS.gene28498 | 0.802484 | 5.49E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene28498 | 0.829841 | 4.11E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene28498 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene059161 | MS.gene28498 | 0.830685 | 2.56E-55 | -1.69E-46 |
| MS.gene059249 | MS.gene28498 | 0.824705 | 6.99E-54 | -1.69E-46 |
| MS.gene059382 | MS.gene28498 | 0.818312 | 2.09E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene28498 | 0.827783 | 1.29E-54 | -1.69E-46 |
| MS.gene059550 | MS.gene28498 | 0.807571 | 4.74E-50 | -1.69E-46 |
| MS.gene059569 | MS.gene28498 | 0.813932 | 1.99E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene28498 | 0.80779 | 4.25E-50 | -1.69E-46 |
| MS.gene059789 | MS.gene28498 | 0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene05979 | MS.gene28498 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene28498 | 0.808378 | 3.19E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene28498 | -0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene28498 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene28498 | 0.830974 | 2.17E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene28498 | 0.800503 | 1.40E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene28498 | 0.861375 | 1.07E-63 | -1.69E-46 |
| MS.gene060683 | MS.gene28498 | 0.827163 | 1.82E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene28498 | 0.825742 | 3.97E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene28498 | 0.809218 | 2.11E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene28498 | 0.845224 | 4.64E-59 | -1.69E-46 |
| MS.gene060998 | MS.gene28498 | 0.846935 | 1.59E-59 | -1.69E-46 |
| MS.gene061040 | MS.gene28498 | -0.856978 | 2.23E-62 | -1.69E-46 |
| MS.gene061085 | MS.gene28498 | 0.813543 | 2.43E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene28498 | -0.822298 | 2.55E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28498.t1 | MTR_8g078270 | 96.277 | 188 | 7 | 0 | 1 | 188 | 1 | 188 | 1.46e-135 | 377 |
| MS.gene28498.t1 | MTR_6g023460 | 55.639 | 133 | 54 | 3 | 57 | 187 | 12 | 141 | 3.12e-42 | 139 |
| MS.gene28498.t1 | MTR_4g103650 | 52.632 | 133 | 58 | 2 | 57 | 187 | 6 | 135 | 2.17e-37 | 126 |
| MS.gene28498.t1 | MTR_4g103630 | 52.632 | 133 | 58 | 2 | 57 | 187 | 10 | 139 | 3.18e-37 | 126 |
| MS.gene28498.t1 | MTR_4g103655 | 52.632 | 133 | 58 | 2 | 57 | 187 | 10 | 139 | 3.99e-37 | 125 |
| MS.gene28498.t1 | MTR_3g089070 | 46.667 | 135 | 71 | 1 | 53 | 187 | 6 | 139 | 1.54e-33 | 116 |
| MS.gene28498.t1 | MTR_3g089090 | 46.667 | 135 | 71 | 1 | 53 | 187 | 5 | 138 | 1.84e-33 | 116 |
| MS.gene28498.t1 | MTR_3g067610 | 40.288 | 139 | 79 | 2 | 50 | 188 | 2 | 136 | 8.77e-27 | 99.4 |
| MS.gene28498.t1 | MTR_5g079340 | 37.037 | 135 | 84 | 1 | 54 | 188 | 5 | 138 | 4.26e-25 | 95.1 |
| MS.gene28498.t1 | MTR_1g032070 | 34.857 | 175 | 104 | 3 | 18 | 187 | 11 | 180 | 9.97e-24 | 93.2 |
| MS.gene28498.t1 | MTR_8g105230 | 40.909 | 132 | 76 | 2 | 54 | 184 | 37 | 167 | 5.46e-23 | 90.9 |
| MS.gene28498.t1 | MTR_8g107110 | 37.313 | 134 | 83 | 1 | 54 | 187 | 25 | 157 | 9.34e-22 | 87.0 |
| MS.gene28498.t1 | MTR_6g079570 | 34.615 | 156 | 97 | 3 | 37 | 188 | 7 | 161 | 5.30e-21 | 85.5 |
| MS.gene28498.t1 | MTR_5g017550 | 30.387 | 181 | 113 | 4 | 17 | 187 | 4 | 181 | 1.12e-20 | 85.1 |
| MS.gene28498.t1 | MTR_1g046950 | 34.783 | 138 | 86 | 2 | 54 | 188 | 5 | 141 | 7.33e-20 | 81.6 |
| MS.gene28498.t1 | MTR_5g017510 | 30.769 | 182 | 112 | 5 | 17 | 187 | 4 | 182 | 7.62e-20 | 82.8 |
| MS.gene28498.t1 | MTR_5g017560 | 30.769 | 182 | 112 | 5 | 17 | 187 | 4 | 182 | 7.62e-20 | 82.8 |
| MS.gene28498.t1 | MTR_8g036075 | 37.584 | 149 | 83 | 5 | 48 | 187 | 44 | 191 | 1.19e-19 | 82.4 |
| MS.gene28498.t1 | MTR_1g041285 | 35.556 | 135 | 85 | 2 | 54 | 187 | 13 | 146 | 5.22e-19 | 79.7 |
| MS.gene28498.t1 | MTR_1g047100 | 31.387 | 137 | 91 | 2 | 54 | 188 | 5 | 140 | 6.77e-19 | 79.0 |
| MS.gene28498.t1 | MTR_1g076650 | 34.815 | 135 | 86 | 2 | 54 | 187 | 13 | 146 | 9.17e-19 | 79.0 |
| MS.gene28498.t1 | MTR_1g076650 | 43.662 | 71 | 40 | 0 | 44 | 114 | 76 | 146 | 1.50e-12 | 62.8 |
| MS.gene28498.t1 | MTR_4g067270 | 35.036 | 137 | 85 | 3 | 54 | 187 | 6 | 141 | 2.49e-18 | 77.8 |
| MS.gene28498.t1 | MTR_4g067270 | 40.000 | 75 | 43 | 1 | 46 | 118 | 71 | 145 | 2.09e-11 | 59.7 |
| MS.gene28498.t1 | MTR_7g075040 | 37.500 | 144 | 79 | 5 | 54 | 187 | 48 | 190 | 2.60e-18 | 79.0 |
| MS.gene28498.t1 | MTR_4g086260 | 34.815 | 135 | 86 | 2 | 54 | 188 | 58 | 190 | 2.73e-18 | 79.0 |
| MS.gene28498.t1 | MTR_7g087610 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 4.59e-18 | 77.0 |
| MS.gene28498.t1 | MTR_5g088320 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 1.96e-17 | 75.5 |
| MS.gene28498.t1 | MTR_6g025320 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 2.14e-17 | 75.5 |
| MS.gene28498.t1 | MTR_8g066630 | 33.333 | 138 | 87 | 2 | 54 | 187 | 18 | 154 | 4.88e-16 | 72.4 |
| MS.gene28498.t1 | MTR_6g007613 | 31.852 | 135 | 90 | 2 | 54 | 187 | 30 | 163 | 7.91e-16 | 71.6 |
| MS.gene28498.t1 | MTR_7g074020 | 31.852 | 135 | 90 | 2 | 54 | 187 | 31 | 164 | 5.66e-15 | 69.7 |
| MS.gene28498.t1 | MTR_4g115170 | 31.073 | 177 | 100 | 4 | 32 | 187 | 41 | 216 | 9.42e-15 | 70.1 |
| MS.gene28498.t1 | MTR_6g007613 | 31.933 | 119 | 79 | 2 | 54 | 171 | 30 | 147 | 3.91e-14 | 67.0 |
| MS.gene28498.t1 | MTR_7g074020 | 31.933 | 119 | 79 | 2 | 54 | 171 | 31 | 148 | 1.58e-13 | 65.5 |
| MS.gene28498.t1 | MTR_1g026190 | 27.451 | 153 | 105 | 3 | 37 | 187 | 371 | 519 | 2.81e-13 | 67.8 |
| MS.gene28498.t1 | MTR_7g089760 | 32.624 | 141 | 91 | 3 | 50 | 187 | 2 | 141 | 3.00e-13 | 64.7 |
| MS.gene28498.t1 | MTR_2g098890 | 28.495 | 186 | 113 | 4 | 7 | 187 | 32 | 202 | 5.37e-13 | 65.1 |
| MS.gene28498.t1 | MTR_5g008705 | 32.061 | 131 | 83 | 3 | 61 | 188 | 2 | 129 | 6.53e-13 | 63.2 |
| MS.gene28498.t1 | MTR_5g009830 | 28.758 | 153 | 103 | 3 | 37 | 187 | 355 | 503 | 9.54e-13 | 66.2 |
| MS.gene28498.t1 | MTR_8g099095 | 27.451 | 153 | 105 | 3 | 37 | 187 | 355 | 503 | 1.57e-12 | 65.5 |
| MS.gene28498.t1 | MTR_3g051770 | 26.752 | 157 | 108 | 3 | 37 | 187 | 372 | 527 | 3.53e-12 | 64.3 |
| MS.gene28498.t1 | MTR_4g112460 | 26.812 | 138 | 97 | 2 | 54 | 188 | 12 | 148 | 5.61e-12 | 61.6 |
| MS.gene28498.t1 | MTR_4g132070 | 28.671 | 143 | 96 | 3 | 47 | 187 | 390 | 528 | 6.43e-12 | 63.5 |
| MS.gene28498.t1 | MTR_3g083470 | 42.857 | 84 | 46 | 2 | 37 | 120 | 141 | 222 | 1.31e-11 | 61.6 |
| MS.gene28498.t1 | MTR_4g132040 | 29.167 | 144 | 96 | 3 | 46 | 187 | 393 | 532 | 2.52e-11 | 62.0 |
| MS.gene28498.t1 | MTR_7g115040 | 28.788 | 132 | 94 | 0 | 56 | 187 | 15 | 146 | 3.23e-11 | 58.9 |
| MS.gene28498.t1 | MTR_3g088655 | 34.694 | 147 | 82 | 5 | 54 | 187 | 9 | 154 | 5.69e-11 | 58.5 |
| MS.gene28498.t1 | MTR_5g008695 | 30.172 | 116 | 73 | 3 | 78 | 188 | 2 | 114 | 6.64e-11 | 57.4 |
| MS.gene28498.t1 | MTR_5g092810 | 26.144 | 153 | 107 | 3 | 37 | 187 | 381 | 529 | 6.95e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28498.t1 | AT3G50770 | 52.764 | 199 | 77 | 6 | 6 | 188 | 7 | 204 | 5.79e-58 | 181 |
| MS.gene28498.t1 | AT1G76650 | 43.056 | 144 | 80 | 2 | 45 | 187 | 34 | 176 | 1.85e-35 | 122 |
| MS.gene28498.t1 | AT1G76650 | 43.056 | 144 | 80 | 2 | 45 | 187 | 34 | 176 | 1.85e-35 | 122 |
| MS.gene28498.t1 | AT1G76640 | 45.775 | 142 | 73 | 2 | 49 | 187 | 18 | 158 | 2.34e-35 | 122 |
| MS.gene28498.t1 | AT5G42380 | 47.059 | 136 | 69 | 2 | 54 | 187 | 50 | 184 | 2.15e-33 | 117 |
| MS.gene28498.t1 | AT1G76650 | 40.278 | 144 | 74 | 3 | 45 | 187 | 34 | 166 | 7.89e-30 | 108 |
| MS.gene28498.t1 | AT1G73630 | 36.242 | 149 | 86 | 3 | 40 | 188 | 12 | 151 | 3.33e-24 | 93.6 |
| MS.gene28498.t1 | AT1G18210 | 33.987 | 153 | 97 | 2 | 36 | 188 | 6 | 154 | 1.25e-23 | 92.4 |
| MS.gene28498.t1 | AT1G18210 | 33.987 | 153 | 97 | 2 | 36 | 188 | 6 | 154 | 1.25e-23 | 92.4 |
| MS.gene28498.t1 | AT1G24620 | 38.971 | 136 | 81 | 2 | 54 | 188 | 38 | 172 | 1.02e-21 | 87.8 |
| MS.gene28498.t1 | AT3G01830 | 37.313 | 134 | 78 | 3 | 57 | 187 | 15 | 145 | 3.45e-21 | 85.1 |
| MS.gene28498.t1 | AT5G37770 | 35.000 | 140 | 85 | 2 | 54 | 188 | 18 | 156 | 3.71e-21 | 85.5 |
| MS.gene28498.t1 | AT5G37770 | 35.000 | 140 | 85 | 2 | 54 | 188 | 18 | 156 | 3.71e-21 | 85.5 |
| MS.gene28498.t1 | AT1G66400 | 32.117 | 137 | 89 | 2 | 54 | 187 | 16 | 151 | 7.00e-20 | 82.0 |
| MS.gene28498.t1 | AT1G66400 | 36.842 | 76 | 48 | 0 | 39 | 114 | 76 | 151 | 1.77e-11 | 60.1 |
| MS.gene28498.t1 | AT3G50360 | 32.051 | 156 | 97 | 3 | 33 | 187 | 14 | 161 | 1.03e-19 | 82.0 |
| MS.gene28498.t1 | AT2G15680 | 32.787 | 183 | 103 | 6 | 6 | 188 | 21 | 183 | 2.52e-19 | 81.6 |
| MS.gene28498.t1 | AT5G37780 | 33.333 | 135 | 88 | 2 | 54 | 187 | 13 | 146 | 4.66e-18 | 77.0 |
| MS.gene28498.t1 | AT1G66410 | 33.333 | 135 | 88 | 2 | 54 | 187 | 13 | 146 | 4.66e-18 | 77.0 |
| MS.gene28498.t1 | AT5G21274 | 33.333 | 135 | 88 | 2 | 54 | 187 | 13 | 146 | 1.02e-17 | 76.3 |
| MS.gene28498.t1 | AT2G27030 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 1.45e-17 | 76.6 |
| MS.gene28498.t1 | AT3G56800 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 1.58e-17 | 75.9 |
| MS.gene28498.t1 | AT2G27030 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 1.58e-17 | 75.9 |
| MS.gene28498.t1 | AT2G41110 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 1.58e-17 | 75.9 |
| MS.gene28498.t1 | AT3G43810 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 2.24e-17 | 75.5 |
| MS.gene28498.t1 | AT5G17470 | 31.159 | 138 | 91 | 3 | 54 | 188 | 3 | 139 | 2.25e-17 | 75.5 |
| MS.gene28498.t1 | AT3G43810 | 32.593 | 135 | 89 | 2 | 54 | 187 | 13 | 146 | 2.67e-17 | 76.6 |
| MS.gene28498.t1 | AT4G12860 | 35.766 | 137 | 84 | 3 | 54 | 187 | 6 | 141 | 2.01e-16 | 73.2 |
| MS.gene28498.t1 | AT3G22930 | 31.852 | 135 | 90 | 2 | 54 | 187 | 36 | 169 | 2.50e-16 | 73.2 |
| MS.gene28498.t1 | AT3G59440 | 32.051 | 156 | 99 | 3 | 34 | 187 | 36 | 186 | 5.60e-16 | 72.8 |
| MS.gene28498.t1 | AT2G41100 | 33.113 | 151 | 83 | 3 | 55 | 188 | 14 | 163 | 7.31e-16 | 74.3 |
| MS.gene28498.t1 | AT2G41100 | 32.237 | 152 | 84 | 3 | 55 | 188 | 103 | 253 | 2.66e-15 | 72.8 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 192 | 255 | 9.49e-11 | 60.1 |
| MS.gene28498.t1 | AT2G41100 | 33.113 | 151 | 83 | 3 | 55 | 188 | 14 | 163 | 7.31e-16 | 74.3 |
| MS.gene28498.t1 | AT2G41100 | 32.237 | 152 | 84 | 3 | 55 | 188 | 103 | 253 | 2.66e-15 | 72.8 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 192 | 255 | 9.49e-11 | 60.1 |
| MS.gene28498.t1 | AT2G41100 | 32.237 | 152 | 84 | 3 | 55 | 188 | 68 | 218 | 1.61e-15 | 73.2 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 157 | 220 | 6.84e-11 | 60.1 |
| MS.gene28498.t1 | AT2G41100 | 32.237 | 152 | 84 | 3 | 55 | 188 | 68 | 218 | 1.61e-15 | 73.2 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 157 | 220 | 6.84e-11 | 60.1 |
| MS.gene28498.t1 | AT2G41100 | 32.237 | 152 | 84 | 3 | 55 | 188 | 68 | 218 | 1.61e-15 | 73.2 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 157 | 220 | 6.84e-11 | 60.1 |
| MS.gene28498.t1 | AT2G36180 | 30.435 | 138 | 91 | 2 | 54 | 187 | 1 | 137 | 4.84e-15 | 69.3 |
| MS.gene28498.t1 | AT4G37010 | 29.078 | 141 | 98 | 2 | 48 | 187 | 22 | 161 | 5.64e-15 | 69.7 |
| MS.gene28498.t1 | AT4G37010 | 29.078 | 141 | 98 | 2 | 48 | 187 | 26 | 165 | 6.71e-15 | 69.3 |
| MS.gene28498.t1 | AT1G05990 | 32.609 | 138 | 88 | 3 | 54 | 187 | 6 | 142 | 6.74e-15 | 68.9 |
| MS.gene28498.t1 | AT4G03290 | 33.333 | 144 | 89 | 3 | 50 | 187 | 2 | 144 | 1.13e-14 | 68.6 |
| MS.gene28498.t1 | AT4G14640 | 30.370 | 135 | 92 | 2 | 54 | 187 | 14 | 147 | 1.20e-14 | 68.2 |
| MS.gene28498.t1 | AT2G41110 | 29.932 | 147 | 89 | 3 | 54 | 187 | 13 | 158 | 1.36e-14 | 68.6 |
| MS.gene28498.t1 | AT5G37780 | 30.000 | 150 | 88 | 3 | 54 | 187 | 13 | 161 | 4.52e-14 | 67.0 |
| MS.gene28498.t1 | AT2G43290 | 30.137 | 146 | 93 | 3 | 50 | 187 | 62 | 206 | 5.72e-14 | 67.8 |
| MS.gene28498.t1 | AT3G07490 | 34.752 | 141 | 88 | 3 | 50 | 187 | 2 | 141 | 8.26e-14 | 66.2 |
| MS.gene28498.t1 | AT5G37780 | 31.967 | 122 | 81 | 2 | 67 | 187 | 13 | 133 | 4.48e-13 | 63.9 |
| MS.gene28498.t1 | AT1G66410 | 31.967 | 122 | 81 | 2 | 67 | 187 | 36 | 156 | 7.34e-13 | 63.5 |
| MS.gene28498.t1 | AT5G37780 | 31.967 | 122 | 81 | 2 | 67 | 187 | 52 | 172 | 9.29e-13 | 63.9 |
| MS.gene28498.t1 | AT2G41090 | 31.343 | 134 | 89 | 2 | 54 | 187 | 13 | 143 | 1.51e-12 | 63.5 |
| MS.gene28498.t1 | AT3G03400 | 30.769 | 130 | 86 | 2 | 54 | 180 | 6 | 134 | 2.49e-12 | 61.6 |
| MS.gene28498.t1 | AT4G04695 | 26.797 | 153 | 106 | 3 | 37 | 187 | 320 | 468 | 2.85e-12 | 64.7 |
| MS.gene28498.t1 | AT3G10190 | 26.220 | 164 | 118 | 3 | 26 | 187 | 43 | 205 | 3.06e-12 | 63.2 |
| MS.gene28498.t1 | AT4G04720 | 28.105 | 153 | 104 | 3 | 37 | 187 | 368 | 516 | 5.29e-12 | 63.9 |
| MS.gene28498.t1 | AT4G04720 | 28.105 | 153 | 104 | 3 | 37 | 187 | 368 | 516 | 5.29e-12 | 63.9 |
| MS.gene28498.t1 | AT4G04700 | 30.070 | 143 | 94 | 4 | 47 | 187 | 330 | 468 | 1.33e-11 | 62.8 |
| MS.gene28498.t1 | AT2G41100 | 44.444 | 63 | 35 | 0 | 55 | 117 | 14 | 76 | 2.44e-11 | 59.3 |
| MS.gene28498.t1 | AT5G12180 | 29.787 | 141 | 93 | 3 | 49 | 187 | 374 | 510 | 2.45e-11 | 62.0 |
| MS.gene28498.t1 | AT5G19360 | 29.371 | 143 | 95 | 3 | 47 | 187 | 367 | 505 | 2.53e-11 | 62.0 |
| MS.gene28498.t1 | AT1G66410 | 32.110 | 109 | 72 | 2 | 80 | 187 | 3 | 110 | 3.24e-11 | 58.2 |
| MS.gene28498.t1 | AT1G66410 | 38.028 | 71 | 44 | 0 | 44 | 114 | 40 | 110 | 9.58e-11 | 57.0 |
| MS.gene28498.t1 | AT1G66410 | 32.110 | 109 | 72 | 2 | 80 | 187 | 3 | 110 | 3.24e-11 | 58.2 |
| MS.gene28498.t1 | AT1G66410 | 38.028 | 71 | 44 | 0 | 44 | 114 | 40 | 110 | 9.58e-11 | 57.0 |
| MS.gene28498.t1 | AT2G41100 | 43.750 | 64 | 36 | 0 | 54 | 117 | 67 | 130 | 3.71e-11 | 60.1 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G04740 | 26.797 | 153 | 106 | 3 | 37 | 187 | 357 | 505 | 4.31e-11 | 61.2 |
| MS.gene28498.t1 | AT4G21940 | 26.144 | 153 | 107 | 3 | 37 | 187 | 390 | 538 | 4.32e-11 | 61.2 |
| MS.gene28498.t1 | AT4G21940 | 26.144 | 153 | 107 | 3 | 37 | 187 | 390 | 538 | 4.96e-11 | 61.2 |
| MS.gene28498.t1 | AT1G50700 | 25.490 | 153 | 108 | 3 | 37 | 187 | 362 | 510 | 6.01e-11 | 60.8 |
| MS.gene28498.t1 | AT3G03000 | 31.081 | 148 | 99 | 2 | 42 | 187 | 9 | 155 | 8.55e-11 | 58.2 |
| MS.gene28498.t1 | AT3G20410 | 25.490 | 153 | 108 | 3 | 37 | 187 | 380 | 528 | 9.32e-11 | 60.5 |
| MS.gene28498.t1 | AT3G20410 | 25.490 | 153 | 108 | 3 | 37 | 187 | 380 | 528 | 9.32e-11 | 60.5 |
| MS.gene28498.t1 | AT4G23650 | 26.797 | 153 | 106 | 3 | 37 | 187 | 367 | 515 | 9.81e-11 | 60.1 |
Find 34 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAATTAAGGTCATATTT+TGG | 0.253510 | 8.4:-28341381 | MS.gene28498:CDS |
| AAATTTCAGCCTATGAATTA+AGG | 0.279881 | 8.4:-28341392 | MS.gene28498:CDS |
| CATTTGATATTGATCATAAT+GGG | 0.291826 | 8.4:-28341089 | MS.gene28498:CDS |
| GCATTTGATATTGATCATAA+TGG | 0.322836 | 8.4:-28341090 | MS.gene28498:CDS |
| AACATCCTTTGCAACCCTTT+TGG | 0.322939 | 8.4:+28341165 | None:intergenic |
| AACAACAATGAAGATGAAAA+AGG | 0.346485 | 8.4:-28341459 | MS.gene28498:CDS |
| TTTAATTACTTTGATGGTAA+TGG | 0.346520 | 8.4:-28341423 | MS.gene28498:CDS |
| AAGTGGTTCTCTAACAAATT+AGG | 0.357630 | 8.4:-28341570 | MS.gene28498:CDS |
| GAAGGTTGTATTACTCCAAA+AGG | 0.358609 | 8.4:-28341180 | MS.gene28498:CDS |
| GACAATGGAATTGGAGATCT+TGG | 0.383514 | 8.4:+28341498 | None:intergenic |
| AAAATATGACCTTAATTCAT+AGG | 0.387773 | 8.4:+28341383 | None:intergenic |
| CAATGAGTTTCATCAAATGA+TGG | 0.411036 | 8.4:-28341055 | MS.gene28498:CDS |
| GGTGTGGTGGACAATGGAAT+TGG | 0.435337 | 8.4:+28341489 | None:intergenic |
| TGCCGACGGCGACAACTTGT+TGG | 0.442984 | 8.4:-28341301 | MS.gene28498:CDS |
| CAAAGGATGTTGCAACGTCT+TGG | 0.455200 | 8.4:-28341153 | MS.gene28498:CDS |
| TACTTTGATGGTAATGGAGA+TGG | 0.468027 | 8.4:-28341417 | MS.gene28498:CDS |
| GTCTCATGAGGAAGCTGAAA+GGG | 0.478927 | 8.4:-28341340 | MS.gene28498:CDS |
| TGATGATAAAGATTTAAGAA+AGG | 0.493170 | 8.4:-28341232 | MS.gene28498:CDS |
| AAGGTTGTATTACTCCAAAA+GGG | 0.532412 | 8.4:-28341179 | MS.gene28498:CDS |
| ATTAAGTTGATGAAAGGTGA+AGG | 0.540993 | 8.4:-28341264 | MS.gene28498:CDS |
| ATAAATTACCTCGATGCCGA+CGG | 0.551682 | 8.4:-28341315 | MS.gene28498:CDS |
| TTGTTAGAGAACCACTTGGA+TGG | 0.571774 | 8.4:+28341576 | None:intergenic |
| TTACTCCAAAAGGGTTGCAA+AGG | 0.573176 | 8.4:-28341170 | MS.gene28498:CDS |
| ATCCAACAAGTTGTCGCCGT+CGG | 0.575636 | 8.4:+28341299 | None:intergenic |
| TGTCTCATGAGGAAGCTGAA+AGG | 0.590151 | 8.4:-28341341 | MS.gene28498:CDS |
| TTTGTGTGGGAGGAGAAAGA+AGG | 0.594986 | 8.4:-28341198 | MS.gene28498:CDS |
| ATTTGATATTGATCATAATG+GGG | 0.620450 | 8.4:-28341088 | MS.gene28498:CDS |
| AAGTTGATGAAAGGTGAAGG+AGG | 0.624388 | 8.4:-28341261 | MS.gene28498:CDS |
| TAATTTGTTAGAGAACCACT+TGG | 0.628045 | 8.4:+28341572 | None:intergenic |
| TGGTGAACACATGTCTCATG+AGG | 0.644374 | 8.4:-28341352 | MS.gene28498:CDS |
| TGCAACGTCTTGGAGATGAT+AGG | 0.646741 | 8.4:-28341143 | MS.gene28498:CDS |
| GAATTCTAAAACCATCCAAG+TGG | 0.683835 | 8.4:-28341587 | MS.gene28498:CDS |
| AGTTGTCGCCGTCGGCATCG+AGG | 0.700664 | 8.4:+28341307 | None:intergenic |
| TAGGTCTTATGAAGAGTGTG+TGG | 0.717207 | 8.4:-28341124 | MS.gene28498:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGACCTTAATTCAT+AGG | + | chr8.4:28341264-28341283 | None:intergenic | 20.0% |
| !! | ATTTGATATTGATCATAATG+GGG | - | chr8.4:28341556-28341575 | MS.gene28498:CDS | 20.0% |
| !! | CATTTGATATTGATCATAAT+GGG | - | chr8.4:28341555-28341574 | MS.gene28498:CDS | 20.0% |
| !! | TGATGATAAAGATTTAAGAA+AGG | - | chr8.4:28341412-28341431 | MS.gene28498:CDS | 20.0% |
| !!! | GATTTTATTAAGTTGATGAA+AGG | - | chr8.4:28341374-28341393 | MS.gene28498:CDS | 20.0% |
| !!! | TATGAATTAAGGTCATATTT+TGG | - | chr8.4:28341263-28341282 | MS.gene28498:CDS | 20.0% |
| !!! | TTTAATTACTTTGATGGTAA+TGG | - | chr8.4:28341221-28341240 | MS.gene28498:CDS | 20.0% |
| ! | AAATTTCAGCCTATGAATTA+AGG | - | chr8.4:28341252-28341271 | MS.gene28498:CDS | 25.0% |
| ! | AACAACAATGAAGATGAAAA+AGG | - | chr8.4:28341185-28341204 | MS.gene28498:CDS | 25.0% |
| ! | GCATTTGATATTGATCATAA+TGG | - | chr8.4:28341554-28341573 | MS.gene28498:CDS | 25.0% |
| !!! | GAGGTTTTTAATTACTTTGA+TGG | - | chr8.4:28341215-28341234 | MS.gene28498:CDS | 25.0% |
| !!! | TCTTCATTGTTGTTAGTTTT+TGG | + | chr8.4:28341179-28341198 | None:intergenic | 25.0% |
| AAGGTTGTATTACTCCAAAA+GGG | - | chr8.4:28341465-28341484 | MS.gene28498:CDS | 30.0% | |
| AAGTGGTTCTCTAACAAATT+AGG | - | chr8.4:28341074-28341093 | MS.gene28498:CDS | 30.0% | |
| AGATGAAAAAGGATTAAGAG+AGG | - | chr8.4:28341196-28341215 | MS.gene28498:CDS | 30.0% | |
| CAATGAGTTTCATCAAATGA+TGG | - | chr8.4:28341589-28341608 | MS.gene28498:CDS | 30.0% | |
| !! | ATTAAGTTGATGAAAGGTGA+AGG | - | chr8.4:28341380-28341399 | MS.gene28498:CDS | 30.0% |
| !! | TAATTTGTTAGAGAACCACT+TGG | + | chr8.4:28341075-28341094 | None:intergenic | 30.0% |
| !!! | AGGTCATATTTTGGTTCAAT+TGG | - | chr8.4:28341272-28341291 | MS.gene28498:CDS | 30.0% |
| !!! | ATTGTTGTTAGTTTTTGGTG+TGG | + | chr8.4:28341174-28341193 | None:intergenic | 30.0% |
| GAAGGTTGTATTACTCCAAA+AGG | - | chr8.4:28341464-28341483 | MS.gene28498:CDS | 35.0% | |
| !! | GAATTCTAAAACCATCCAAG+TGG | - | chr8.4:28341057-28341076 | MS.gene28498:CDS | 35.0% |
| !! | TACTTTGATGGTAATGGAGA+TGG | - | chr8.4:28341227-28341246 | MS.gene28498:CDS | 35.0% |
| ATAAATTACCTCGATGCCGA+CGG | - | chr8.4:28341329-28341348 | MS.gene28498:CDS | 40.0% | |
| GACAATGGAATTGGAGATCT+TGG | + | chr8.4:28341149-28341168 | None:intergenic | 40.0% | |
| TTACTCCAAAAGGGTTGCAA+AGG | - | chr8.4:28341474-28341493 | MS.gene28498:CDS | 40.0% | |
| TTGTTAGAGAACCACTTGGA+TGG | + | chr8.4:28341071-28341090 | None:intergenic | 40.0% | |
| ! | AACATCCTTTGCAACCCTTT+TGG | + | chr8.4:28341482-28341501 | None:intergenic | 40.0% |
| ! | TAGGTCTTATGAAGAGTGTG+TGG | - | chr8.4:28341520-28341539 | MS.gene28498:CDS | 40.0% |
| !! | AAGTTGATGAAAGGTGAAGG+AGG | - | chr8.4:28341383-28341402 | MS.gene28498:CDS | 40.0% |
| !!! | AGGCTTTTGAGATGTTTGTG+TGG | - | chr8.4:28341432-28341451 | MS.gene28498:CDS | 40.0% |
| !!! | GGCTTTTGAGATGTTTGTGT+GGG | - | chr8.4:28341433-28341452 | MS.gene28498:CDS | 40.0% |
| !!! | GTTGTTAGTTTTTGGTGTGG+TGG | + | chr8.4:28341171-28341190 | None:intergenic | 40.0% |
| !!! | TTTTGAGATGTTTGTGTGGG+AGG | - | chr8.4:28341436-28341455 | MS.gene28498:CDS | 40.0% |
| CAAAGGATGTTGCAACGTCT+TGG | - | chr8.4:28341491-28341510 | MS.gene28498:CDS | 45.0% | |
| GTCTCATGAGGAAGCTGAAA+GGG | - | chr8.4:28341304-28341323 | MS.gene28498:CDS | 45.0% | |
| TGCAACGTCTTGGAGATGAT+AGG | - | chr8.4:28341501-28341520 | MS.gene28498:CDS | 45.0% | |
| TGGTGAACACATGTCTCATG+AGG | - | chr8.4:28341292-28341311 | MS.gene28498:CDS | 45.0% | |
| TGTCTCATGAGGAAGCTGAA+AGG | - | chr8.4:28341303-28341322 | MS.gene28498:CDS | 45.0% | |
| TTTGTGTGGGAGGAGAAAGA+AGG | - | chr8.4:28341446-28341465 | MS.gene28498:CDS | 45.0% | |
| !!! | GTTTTTGGTGTGGTGGACAA+TGG | + | chr8.4:28341164-28341183 | None:intergenic | 45.0% |
| ATCCAACAAGTTGTCGCCGT+CGG | + | chr8.4:28341348-28341367 | None:intergenic | 50.0% | |
| !! | GGTGTGGTGGACAATGGAAT+TGG | + | chr8.4:28341158-28341177 | None:intergenic | 50.0% |
| TGCCGACGGCGACAACTTGT+TGG | - | chr8.4:28341343-28341362 | MS.gene28498:CDS | 60.0% | |
| AGTTGTCGCCGTCGGCATCG+AGG | + | chr8.4:28341340-28341359 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 28341050 | 28341616 | 28341050 | ID=MS.gene28498 |
| chr8.4 | mRNA | 28341050 | 28341616 | 28341050 | ID=MS.gene28498.t1;Parent=MS.gene28498 |
| chr8.4 | exon | 28341050 | 28341616 | 28341050 | ID=MS.gene28498.t1.exon1;Parent=MS.gene28498.t1 |
| chr8.4 | CDS | 28341050 | 28341616 | 28341050 | ID=cds.MS.gene28498.t1;Parent=MS.gene28498.t1 |
| Gene Sequence |
| Protein sequence |
