Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64645.t1 | XP_003606581.1 | 95.8 | 453 | 19 | 0 | 1 | 453 | 1 | 453 | 2.20E-97 | 366.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64645.t1 | Q6AWW5 | 70.1 | 438 | 128 | 1 | 19 | 453 | 5 | 442 | 8.8e-47 | 189.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64645.t1 | B7FLB6 | 95.8 | 453 | 19 | 0 | 1 | 453 | 1 | 453 | 1.6e-97 | 366.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene64645 | 0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene64645 | 0.809054 | 2.29E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene64645 | 0.837187 | 6.03E-57 | -1.69E-46 |
| MS.gene049567 | MS.gene64645 | 0.812736 | 3.65E-51 | -1.69E-46 |
| MS.gene049669 | MS.gene64645 | 0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene049958 | MS.gene64645 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene64645 | 0.829279 | 5.63E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene64645 | 0.848087 | 7.67E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene64645 | 0.852881 | 3.45E-61 | -1.69E-46 |
| MS.gene050330 | MS.gene64645 | -0.817046 | 4.04E-52 | -1.69E-46 |
| MS.gene050438 | MS.gene64645 | 0.81344 | 2.56E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene64645 | 0.841648 | 4.18E-58 | -1.69E-46 |
| MS.gene050558 | MS.gene64645 | 0.824486 | 7.86E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene64645 | -0.802764 | 4.81E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene64645 | 0.841517 | 4.53E-58 | -1.69E-46 |
| MS.gene050721 | MS.gene64645 | 0.841228 | 5.40E-58 | -1.69E-46 |
| MS.gene050724 | MS.gene64645 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene64645 | 0.813581 | 2.38E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene64645 | 0.869599 | 2.74E-66 | -1.69E-46 |
| MS.gene050787 | MS.gene64645 | 0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene64645 | 0.856298 | 3.54E-62 | -1.69E-46 |
| MS.gene050824 | MS.gene64645 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene64645 | 0.803139 | 4.02E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene64645 | 0.815322 | 9.81E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene64645 | -0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene051207 | MS.gene64645 | 0.833185 | 6.17E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene64645 | 0.81107 | 8.42E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene64645 | 0.82855 | 8.45E-55 | -1.69E-46 |
| MS.gene051492 | MS.gene64645 | 0.814414 | 1.56E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene64645 | 0.830617 | 2.66E-55 | -1.69E-46 |
| MS.gene052190 | MS.gene64645 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene64645 | 0.807118 | 5.91E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene64645 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene64645 | -0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene64645 | 0.80964 | 1.71E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene64645 | 0.817222 | 3.69E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene64645 | 0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene64645 | 0.813854 | 2.07E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene64645 | 0.809779 | 1.60E-50 | -1.69E-46 |
| MS.gene053641 | MS.gene64645 | 0.82238 | 2.44E-53 | -1.69E-46 |
| MS.gene053647 | MS.gene64645 | 0.817054 | 4.02E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene64645 | 0.801897 | 7.25E-49 | -1.69E-46 |
| MS.gene054083 | MS.gene64645 | 0.827322 | 1.67E-54 | -1.69E-46 |
| MS.gene054093 | MS.gene64645 | 0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene05410 | MS.gene64645 | 0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene05414 | MS.gene64645 | 0.840357 | 9.13E-58 | -1.69E-46 |
| MS.gene05415 | MS.gene64645 | 0.830873 | 2.30E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene64645 | 0.828507 | 8.65E-55 | -1.69E-46 |
| MS.gene05427 | MS.gene64645 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene64645 | -0.819155 | 1.35E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene64645 | 0.808981 | 2.37E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene64645 | 0.816908 | 4.34E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene64645 | 0.860092 | 2.63E-63 | -1.69E-46 |
| MS.gene054576 | MS.gene64645 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene64645 | 0.842269 | 2.87E-58 | -1.69E-46 |
| MS.gene054826 | MS.gene64645 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene64645 | 0.835701 | 1.44E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene64645 | 0.819849 | 9.36E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene64645 | 0.821135 | 4.74E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene64645 | 0.809008 | 2.34E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene64645 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene64645 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene64645 | 0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene64645 | 0.823744 | 1.17E-53 | -1.69E-46 |
| MS.gene056069 | MS.gene64645 | -0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene64645 | 0.82976 | 4.30E-55 | -1.69E-46 |
| MS.gene057012 | MS.gene64645 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene64645 | 0.833043 | 6.69E-56 | -1.69E-46 |
| MS.gene05761 | MS.gene64645 | 0.829627 | 4.63E-55 | -1.69E-46 |
| MS.gene057967 | MS.gene64645 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene64645 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene058426 | MS.gene64645 | 0.812037 | 5.19E-51 | -1.69E-46 |
| MS.gene058636 | MS.gene64645 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene64645 | 0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene64645 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene64645 | 0.810812 | 9.57E-51 | -1.69E-46 |
| MS.gene059789 | MS.gene64645 | 0.825198 | 5.34E-54 | -1.69E-46 |
| MS.gene060137 | MS.gene64645 | -0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene64645 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene060373 | MS.gene64645 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene64645 | 0.815694 | 8.11E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene64645 | 0.812962 | 3.26E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene64645 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene64645 | 0.801303 | 9.60E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene64645 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene64645 | 0.811316 | 7.44E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene64645 | -0.881813 | 1.76E-70 | -1.69E-46 |
| MS.gene061114 | MS.gene64645 | -0.811614 | 6.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64645.t1 | MTR_4g062100 | 97.192 | 463 | 7 | 1 | 1 | 463 | 1 | 457 | 0.0 | 908 |
| MS.gene64645.t1 | MTR_2g096190 | 79.458 | 443 | 90 | 1 | 12 | 453 | 7 | 449 | 0.0 | 698 |
| MS.gene64645.t1 | MTR_7g100390 | 61.086 | 442 | 165 | 2 | 22 | 463 | 1 | 435 | 0.0 | 521 |
| MS.gene64645.t1 | MTR_7g117620 | 57.399 | 446 | 183 | 5 | 8 | 453 | 21 | 459 | 2.16e-160 | 466 |
| MS.gene64645.t1 | MTR_1g115575 | 47.198 | 464 | 207 | 7 | 16 | 456 | 58 | 506 | 2.93e-127 | 382 |
| MS.gene64645.t1 | MTR_1g032100 | 43.596 | 445 | 227 | 7 | 35 | 468 | 14 | 445 | 1.89e-117 | 355 |
| MS.gene64645.t1 | MTR_8g105260 | 45.700 | 407 | 204 | 5 | 66 | 468 | 59 | 452 | 6.64e-114 | 347 |
| MS.gene64645.t1 | MTR_7g100430 | 43.100 | 471 | 229 | 8 | 19 | 465 | 56 | 511 | 1.33e-102 | 319 |
| MS.gene64645.t1 | MTR_2g101310 | 27.200 | 500 | 267 | 15 | 28 | 453 | 67 | 543 | 3.94e-33 | 133 |
| MS.gene64645.t1 | MTR_2g101310 | 25.781 | 256 | 183 | 4 | 32 | 286 | 2 | 251 | 2.17e-17 | 85.5 |
| MS.gene64645.t1 | MTR_2g101320 | 27.071 | 495 | 267 | 15 | 32 | 453 | 71 | 544 | 1.97e-30 | 125 |
| MS.gene64645.t1 | MTR_2g101320 | 21.918 | 292 | 178 | 6 | 32 | 288 | 2 | 278 | 3.47e-18 | 88.2 |
| MS.gene64645.t1 | MTR_2g101310 | 26.168 | 428 | 229 | 11 | 29 | 384 | 68 | 480 | 1.42e-24 | 107 |
| MS.gene64645.t1 | MTR_2g101310 | 25.781 | 256 | 183 | 4 | 32 | 286 | 2 | 251 | 4.71e-17 | 84.0 |
| MS.gene64645.t1 | MTR_1g069110 | 26.765 | 340 | 224 | 9 | 133 | 453 | 44 | 377 | 3.29e-23 | 102 |
| MS.gene64645.t1 | MTR_8g066670 | 25.000 | 400 | 242 | 9 | 60 | 430 | 1061 | 1431 | 2.79e-21 | 98.2 |
| MS.gene64645.t1 | MTR_7g451420 | 25.538 | 325 | 203 | 7 | 74 | 384 | 9 | 308 | 3.70e-17 | 82.8 |
| MS.gene64645.t1 | MTR_3g085830 | 26.761 | 284 | 177 | 10 | 35 | 294 | 109 | 385 | 9.98e-17 | 83.6 |
| MS.gene64645.t1 | MTR_3g085830 | 33.500 | 200 | 121 | 5 | 58 | 248 | 94 | 290 | 1.07e-15 | 80.1 |
| MS.gene64645.t1 | MTR_3g085830 | 29.167 | 192 | 126 | 4 | 100 | 282 | 100 | 290 | 4.39e-13 | 72.0 |
| MS.gene64645.t1 | MTR_8g073260 | 24.107 | 336 | 210 | 8 | 109 | 423 | 47 | 358 | 2.25e-16 | 81.6 |
| MS.gene64645.t1 | MTR_6g022830 | 33.171 | 205 | 116 | 6 | 108 | 294 | 192 | 393 | 2.69e-16 | 82.0 |
| MS.gene64645.t1 | MTR_6g023070 | 33.171 | 205 | 116 | 6 | 108 | 294 | 129 | 330 | 4.41e-16 | 81.3 |
| MS.gene64645.t1 | MTR_8g072510 | 23.148 | 324 | 212 | 6 | 74 | 384 | 10 | 309 | 1.29e-15 | 79.3 |
| MS.gene64645.t1 | MTR_2g438760 | 22.718 | 471 | 293 | 10 | 34 | 454 | 50 | 499 | 2.06e-15 | 79.3 |
| MS.gene64645.t1 | MTR_8g080080 | 26.941 | 219 | 142 | 3 | 108 | 308 | 188 | 406 | 2.26e-15 | 79.3 |
| MS.gene64645.t1 | MTR_8g080080 | 30.769 | 195 | 119 | 3 | 70 | 248 | 102 | 296 | 6.70e-15 | 77.8 |
| MS.gene64645.t1 | MTR_1g112830 | 30.000 | 190 | 130 | 3 | 109 | 298 | 139 | 325 | 5.39e-15 | 78.2 |
| MS.gene64645.t1 | MTR_5g043640 | 32.727 | 165 | 106 | 4 | 136 | 298 | 51 | 212 | 2.05e-14 | 73.6 |
| MS.gene64645.t1 | MTR_8g062410 | 25.490 | 255 | 174 | 3 | 74 | 315 | 10 | 261 | 4.32e-14 | 74.7 |
| MS.gene64645.t1 | MTR_5g085480 | 25.070 | 355 | 181 | 12 | 100 | 416 | 111 | 418 | 4.62e-14 | 74.7 |
| MS.gene64645.t1 | MTR_5g085830 | 21.558 | 385 | 265 | 7 | 67 | 430 | 240 | 608 | 4.88e-14 | 75.1 |
| MS.gene64645.t1 | MTR_3g105650 | 25.152 | 330 | 173 | 9 | 107 | 384 | 3 | 310 | 6.22e-14 | 73.9 |
| MS.gene64645.t1 | MTR_5g085480 | 25.070 | 355 | 181 | 12 | 100 | 416 | 271 | 578 | 8.04e-14 | 74.3 |
| MS.gene64645.t1 | MTR_1g059930 | 25.688 | 327 | 171 | 9 | 106 | 384 | 9 | 311 | 2.24e-13 | 72.4 |
| MS.gene64645.t1 | MTR_7g099570 | 27.200 | 250 | 164 | 8 | 103 | 341 | 7 | 249 | 2.34e-13 | 72.8 |
| MS.gene64645.t1 | MTR_8g467780 | 28.387 | 155 | 109 | 1 | 109 | 261 | 11 | 165 | 2.70e-13 | 72.0 |
| MS.gene64645.t1 | MTR_2g096760 | 28.365 | 208 | 124 | 4 | 73 | 261 | 14 | 215 | 4.12e-13 | 71.6 |
| MS.gene64645.t1 | MTR_3g016210 | 22.152 | 316 | 211 | 6 | 104 | 384 | 5 | 320 | 7.02e-13 | 70.9 |
| MS.gene64645.t1 | MTR_8g068990 | 23.973 | 292 | 171 | 6 | 109 | 386 | 48 | 302 | 7.69e-13 | 70.9 |
| MS.gene64645.t1 | MTR_5g026800 | 31.163 | 215 | 122 | 6 | 109 | 322 | 15 | 204 | 8.72e-13 | 68.9 |
| MS.gene64645.t1 | MTR_8g039620 | 23.939 | 330 | 174 | 8 | 107 | 384 | 12 | 316 | 9.78e-13 | 70.5 |
| MS.gene64645.t1 | MTR_5g085810 | 20.352 | 398 | 266 | 8 | 62 | 430 | 261 | 636 | 2.12e-12 | 70.1 |
| MS.gene64645.t1 | MTR_8g040930 | 22.741 | 343 | 215 | 8 | 116 | 432 | 2 | 320 | 3.63e-12 | 68.2 |
| MS.gene64645.t1 | MTR_8g041240 | 22.741 | 343 | 215 | 8 | 116 | 432 | 2 | 320 | 3.63e-12 | 68.2 |
| MS.gene64645.t1 | MTR_4g116160 | 28.625 | 269 | 176 | 9 | 109 | 373 | 40 | 296 | 4.31e-12 | 68.6 |
| MS.gene64645.t1 | MTR_4g063830 | 22.961 | 331 | 223 | 8 | 71 | 382 | 13 | 330 | 7.97e-12 | 67.4 |
| MS.gene64645.t1 | MTR_5g085500 | 33.766 | 154 | 93 | 5 | 135 | 280 | 1 | 153 | 8.57e-12 | 67.4 |
| MS.gene64645.t1 | MTR_6g027840 | 27.113 | 284 | 178 | 11 | 34 | 315 | 246 | 502 | 1.06e-11 | 67.4 |
| MS.gene64645.t1 | MTR_1g089180 | 28.947 | 228 | 134 | 10 | 95 | 298 | 206 | 429 | 1.28e-11 | 67.0 |
| MS.gene64645.t1 | MTR_4g116160 | 28.261 | 276 | 182 | 9 | 109 | 380 | 40 | 303 | 1.97e-11 | 66.6 |
| MS.gene64645.t1 | MTR_4g113530 | 30.357 | 168 | 112 | 4 | 136 | 303 | 548 | 710 | 5.29e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64645.t1 | AT1G07710 | 70.925 | 454 | 125 | 3 | 1 | 453 | 1 | 448 | 0.0 | 598 |
| MS.gene64645.t1 | AT1G07710 | 70.925 | 454 | 125 | 3 | 1 | 453 | 1 | 448 | 0.0 | 598 |
| MS.gene64645.t1 | AT5G60070 | 65.929 | 452 | 149 | 3 | 7 | 453 | 8 | 459 | 0.0 | 575 |
| MS.gene64645.t1 | AT5G02620 | 63.946 | 441 | 150 | 3 | 19 | 453 | 5 | 442 | 0.0 | 541 |
| MS.gene64645.t1 | AT5G02620 | 63.946 | 441 | 150 | 3 | 19 | 453 | 5 | 442 | 0.0 | 541 |
| MS.gene64645.t1 | AT5G02620 | 63.946 | 441 | 150 | 3 | 19 | 453 | 5 | 442 | 0.0 | 541 |
| MS.gene64645.t1 | AT5G02620 | 60.991 | 464 | 149 | 4 | 19 | 453 | 5 | 465 | 0.0 | 530 |
| MS.gene64645.t1 | AT5G02620 | 60.991 | 464 | 149 | 4 | 19 | 453 | 5 | 465 | 0.0 | 530 |
| MS.gene64645.t1 | AT2G31820 | 56.027 | 448 | 189 | 5 | 8 | 455 | 130 | 569 | 8.57e-158 | 463 |
| MS.gene64645.t1 | AT1G05640 | 56.404 | 445 | 178 | 7 | 15 | 453 | 98 | 532 | 5.51e-151 | 444 |
| MS.gene64645.t1 | AT3G12360 | 46.256 | 454 | 217 | 6 | 16 | 453 | 47 | 489 | 3.27e-121 | 367 |
| MS.gene64645.t1 | AT3G12360 | 46.256 | 454 | 217 | 6 | 16 | 453 | 59 | 501 | 4.35e-121 | 367 |
| MS.gene64645.t1 | AT3G09550 | 46.154 | 455 | 210 | 7 | 19 | 453 | 76 | 515 | 1.46e-120 | 366 |
| MS.gene64645.t1 | AT3G09550 | 46.154 | 455 | 210 | 7 | 19 | 453 | 76 | 515 | 1.46e-120 | 366 |
| MS.gene64645.t1 | AT3G09550 | 46.154 | 455 | 210 | 7 | 19 | 453 | 83 | 522 | 1.47e-120 | 366 |
| MS.gene64645.t1 | AT2G01680 | 43.080 | 448 | 228 | 5 | 35 | 468 | 14 | 448 | 2.36e-114 | 347 |
| MS.gene64645.t1 | AT2G24600 | 26.009 | 446 | 280 | 13 | 32 | 453 | 72 | 491 | 1.68e-32 | 131 |
| MS.gene64645.t1 | AT2G24600 | 26.009 | 446 | 280 | 13 | 32 | 453 | 72 | 491 | 1.68e-32 | 131 |
| MS.gene64645.t1 | AT1G34050 | 27.088 | 443 | 278 | 11 | 21 | 453 | 75 | 482 | 2.30e-29 | 121 |
| MS.gene64645.t1 | AT4G03500 | 25.407 | 492 | 286 | 15 | 4 | 429 | 41 | 517 | 8.69e-29 | 120 |
| MS.gene64645.t1 | AT4G03500 | 25.407 | 492 | 286 | 15 | 4 | 429 | 41 | 517 | 8.69e-29 | 120 |
| MS.gene64645.t1 | AT4G03500 | 24.696 | 494 | 287 | 16 | 4 | 429 | 64 | 540 | 1.01e-28 | 120 |
| MS.gene64645.t1 | AT5G54710 | 27.703 | 444 | 263 | 13 | 32 | 453 | 103 | 510 | 2.39e-28 | 119 |
| MS.gene64645.t1 | AT5G54710 | 27.703 | 444 | 263 | 13 | 32 | 453 | 148 | 555 | 2.72e-28 | 119 |
| MS.gene64645.t1 | AT5G54710 | 26.695 | 236 | 160 | 3 | 90 | 323 | 1 | 225 | 5.74e-13 | 71.6 |
| MS.gene64645.t1 | AT5G54710 | 23.958 | 288 | 177 | 5 | 32 | 290 | 19 | 293 | 1.18e-12 | 70.9 |
| MS.gene64645.t1 | AT1G10340 | 25.602 | 457 | 296 | 13 | 32 | 465 | 72 | 507 | 2.31e-27 | 115 |
| MS.gene64645.t1 | AT1G10340 | 24.740 | 481 | 302 | 13 | 31 | 465 | 37 | 503 | 3.10e-27 | 115 |
| MS.gene64645.t1 | AT4G14390 | 26.107 | 429 | 267 | 10 | 33 | 428 | 149 | 560 | 9.65e-27 | 114 |
| MS.gene64645.t1 | AT4G14390 | 26.279 | 430 | 266 | 10 | 33 | 428 | 168 | 580 | 1.08e-26 | 114 |
| MS.gene64645.t1 | AT4G14390 | 26.107 | 429 | 267 | 10 | 33 | 428 | 168 | 579 | 1.34e-26 | 114 |
| MS.gene64645.t1 | AT4G03460 | 24.396 | 455 | 276 | 13 | 32 | 429 | 81 | 524 | 1.58e-24 | 107 |
| MS.gene64645.t1 | AT4G03460 | 33.824 | 136 | 79 | 2 | 134 | 258 | 75 | 210 | 9.14e-13 | 70.9 |
| MS.gene64645.t1 | AT4G03470 | 25.175 | 429 | 277 | 11 | 27 | 429 | 149 | 559 | 2.30e-24 | 107 |
| MS.gene64645.t1 | AT1G03670 | 22.747 | 466 | 287 | 11 | 21 | 429 | 62 | 511 | 3.35e-24 | 106 |
| MS.gene64645.t1 | AT4G03460 | 23.765 | 425 | 261 | 11 | 62 | 429 | 74 | 492 | 6.55e-24 | 105 |
| MS.gene64645.t1 | AT4G03480 | 26.425 | 386 | 220 | 10 | 67 | 429 | 309 | 653 | 9.85e-24 | 105 |
| MS.gene64645.t1 | AT4G03480 | 26.425 | 386 | 220 | 10 | 67 | 429 | 312 | 656 | 1.08e-23 | 105 |
| MS.gene64645.t1 | AT2G24600 | 26.463 | 393 | 241 | 14 | 32 | 399 | 72 | 441 | 1.70e-23 | 103 |
| MS.gene64645.t1 | AT2G24600 | 26.463 | 393 | 241 | 14 | 32 | 399 | 72 | 441 | 1.70e-23 | 103 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G05040 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 2.09e-22 | 100 |
| MS.gene64645.t1 | AT4G05040 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.37e-11 | 65.1 |
| MS.gene64645.t1 | AT4G10720 | 26.488 | 336 | 203 | 9 | 109 | 427 | 41 | 349 | 5.80e-22 | 98.2 |
| MS.gene64645.t1 | AT4G10720 | 27.645 | 293 | 174 | 7 | 109 | 384 | 41 | 312 | 9.73e-22 | 98.2 |
| MS.gene64645.t1 | AT5G54700 | 27.619 | 315 | 157 | 9 | 165 | 465 | 23 | 280 | 5.23e-20 | 91.7 |
| MS.gene64645.t1 | AT4G14390 | 25.521 | 384 | 242 | 9 | 33 | 383 | 149 | 521 | 1.86e-19 | 91.7 |
| MS.gene64645.t1 | AT5G50140 | 25.551 | 454 | 251 | 16 | 27 | 453 | 57 | 450 | 1.89e-18 | 88.6 |
| MS.gene64645.t1 | AT5G50140 | 24.815 | 270 | 179 | 6 | 80 | 331 | 6 | 269 | 1.00e-14 | 77.0 |
| MS.gene64645.t1 | AT5G51160 | 26.364 | 330 | 196 | 10 | 135 | 432 | 43 | 357 | 1.94e-18 | 88.2 |
| MS.gene64645.t1 | AT4G14400 | 23.841 | 453 | 255 | 10 | 33 | 429 | 71 | 489 | 2.60e-18 | 88.2 |
| MS.gene64645.t1 | AT4G14400 | 23.841 | 453 | 255 | 10 | 33 | 429 | 71 | 489 | 2.60e-18 | 88.2 |
| MS.gene64645.t1 | AT4G14400 | 23.841 | 453 | 255 | 10 | 33 | 429 | 137 | 555 | 4.63e-18 | 87.8 |
| MS.gene64645.t1 | AT4G03440 | 24.934 | 377 | 240 | 12 | 67 | 429 | 269 | 616 | 9.03e-18 | 87.0 |
| MS.gene64645.t1 | AT4G03440 | 24.934 | 377 | 240 | 12 | 67 | 429 | 262 | 609 | 1.06e-17 | 86.7 |
| MS.gene64645.t1 | AT4G03440 | 24.934 | 377 | 240 | 12 | 67 | 429 | 262 | 609 | 1.06e-17 | 86.7 |
| MS.gene64645.t1 | AT5G15500 | 25.526 | 333 | 176 | 7 | 108 | 388 | 5 | 317 | 6.02e-17 | 83.6 |
| MS.gene64645.t1 | AT4G03450 | 26.619 | 417 | 239 | 15 | 32 | 429 | 154 | 522 | 1.00e-16 | 83.6 |
| MS.gene64645.t1 | AT4G03450 | 25.379 | 264 | 169 | 5 | 27 | 288 | 101 | 338 | 1.75e-13 | 73.2 |
| MS.gene64645.t1 | AT4G03450 | 24.176 | 273 | 184 | 6 | 35 | 290 | 40 | 306 | 3.16e-11 | 66.2 |
| MS.gene64645.t1 | AT4G03450 | 25.962 | 416 | 243 | 13 | 32 | 429 | 154 | 522 | 1.14e-16 | 83.2 |
| MS.gene64645.t1 | AT4G03450 | 25.379 | 264 | 169 | 5 | 27 | 288 | 101 | 338 | 2.51e-13 | 72.8 |
| MS.gene64645.t1 | AT4G03450 | 24.176 | 273 | 184 | 6 | 35 | 290 | 40 | 306 | 4.75e-11 | 65.5 |
| MS.gene64645.t1 | AT5G54700 | 25.705 | 319 | 179 | 9 | 170 | 465 | 34 | 317 | 1.37e-16 | 82.4 |
| MS.gene64645.t1 | AT2G03430 | 32.353 | 204 | 131 | 6 | 56 | 257 | 33 | 231 | 9.16e-16 | 77.4 |
| MS.gene64645.t1 | AT2G03430 | 34.759 | 187 | 109 | 7 | 64 | 245 | 8 | 186 | 2.22e-13 | 70.1 |
| MS.gene64645.t1 | AT2G03430 | 31.818 | 198 | 119 | 9 | 109 | 298 | 16 | 205 | 1.37e-11 | 65.1 |
| MS.gene64645.t1 | AT3G04140 | 26.480 | 321 | 193 | 11 | 35 | 316 | 106 | 422 | 2.12e-15 | 79.3 |
| MS.gene64645.t1 | AT3G04140 | 30.542 | 203 | 120 | 4 | 100 | 281 | 97 | 299 | 1.86e-13 | 73.2 |
| MS.gene64645.t1 | AT3G01750 | 27.823 | 248 | 138 | 7 | 35 | 248 | 109 | 349 | 1.20e-14 | 77.0 |
| MS.gene64645.t1 | AT3G01750 | 27.823 | 248 | 138 | 7 | 35 | 248 | 109 | 349 | 1.20e-14 | 77.0 |
| MS.gene64645.t1 | AT4G03490 | 20.872 | 436 | 249 | 12 | 62 | 422 | 84 | 498 | 2.44e-13 | 72.8 |
| MS.gene64645.t1 | AT4G03490 | 20.331 | 423 | 229 | 12 | 62 | 422 | 64 | 440 | 2.59e-13 | 72.8 |
| MS.gene64645.t1 | AT4G03490 | 20.872 | 436 | 249 | 12 | 62 | 422 | 84 | 498 | 3.03e-13 | 72.4 |
| MS.gene64645.t1 | AT4G03490 | 20.872 | 436 | 249 | 12 | 62 | 422 | 74 | 488 | 3.10e-13 | 72.4 |
| MS.gene64645.t1 | AT4G03490 | 20.331 | 423 | 229 | 12 | 62 | 422 | 74 | 450 | 3.49e-13 | 72.4 |
| MS.gene64645.t1 | AT5G57740 | 26.800 | 250 | 144 | 6 | 109 | 322 | 55 | 301 | 1.38e-12 | 70.1 |
| MS.gene64645.t1 | AT4G19150 | 35.833 | 120 | 75 | 2 | 109 | 228 | 20 | 137 | 1.45e-12 | 67.8 |
| MS.gene64645.t1 | AT5G20350 | 30.542 | 203 | 132 | 6 | 99 | 298 | 25 | 221 | 1.94e-12 | 70.1 |
| MS.gene64645.t1 | AT5G54620 | 28.182 | 220 | 142 | 5 | 109 | 313 | 41 | 259 | 2.31e-12 | 69.3 |
| MS.gene64645.t1 | AT5G54620 | 28.188 | 149 | 105 | 1 | 116 | 262 | 12 | 160 | 2.31e-11 | 66.2 |
| MS.gene64645.t1 | AT1G14500 | 24.255 | 235 | 159 | 4 | 109 | 326 | 41 | 273 | 2.91e-12 | 68.9 |
| MS.gene64645.t1 | AT1G14500 | 27.922 | 154 | 107 | 3 | 112 | 262 | 8 | 160 | 2.82e-11 | 65.9 |
| MS.gene64645.t1 | AT2G28840 | 29.341 | 167 | 103 | 4 | 109 | 261 | 50 | 215 | 5.17e-12 | 68.2 |
| MS.gene64645.t1 | AT3G04710 | 28.571 | 287 | 185 | 9 | 10 | 294 | 227 | 495 | 1.66e-11 | 67.0 |
| MS.gene64645.t1 | AT2G26650 | 34.395 | 157 | 97 | 5 | 104 | 260 | 445 | 595 | 2.68e-11 | 66.6 |
| MS.gene64645.t1 | AT2G26650 | 34.395 | 157 | 97 | 5 | 104 | 260 | 550 | 700 | 2.70e-11 | 66.6 |
| MS.gene64645.t1 | AT2G14255 | 30.201 | 149 | 101 | 3 | 109 | 256 | 95 | 241 | 4.04e-11 | 65.9 |
Find 107 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGGGGTAACTATTAT+TGG | 0.156648 | 4.4:+43310345 | MS.gene64645:CDS |
| AATAAACATGGTTGATAATA+AGG | 0.174079 | 4.4:+43308816 | MS.gene64645:CDS |
| CATTGGGTACTATGAGTTAT+TGG | 0.186716 | 4.4:+43310388 | MS.gene64645:CDS |
| TTCTTCCTTTGAGCCCTTAC+TGG | 0.196107 | 4.4:-43307601 | None:intergenic |
| CTATGAGTTATTGGGTTATT+AGG | 0.231803 | 4.4:+43310397 | MS.gene64645:CDS |
| TCAACCATGTTTATTGTTGA+TGG | 0.242519 | 4.4:-43308808 | None:intergenic |
| TACCTGAGTTCTTCCCTTCC+TGG | 0.243726 | 4.4:-43308863 | None:intergenic |
| GCTGCTAAACAAGGGGATTT+AGG | 0.260704 | 4.4:+43307895 | MS.gene64645:CDS |
| TTTCCTCGAGGTATGTGTTT+TGG | 0.279074 | 4.4:-43310075 | None:intergenic |
| ACCCAATGTTGTAGCCATTA+TGG | 0.293380 | 4.4:-43310373 | None:intergenic |
| TGTAACGCGGACTGATAAAA+AGG | 0.298877 | 4.4:+43308714 | MS.gene64645:CDS |
| CTTTATGTTGCTGCTGAGTA+TGG | 0.312082 | 4.4:+43307781 | MS.gene64645:CDS |
| AGATATTGTAAAGATCTTAA+TGG | 0.322743 | 4.4:+43308471 | MS.gene64645:intron |
| CAATTGGGGTAACTATTATT+GGG | 0.329062 | 4.4:+43310346 | MS.gene64645:CDS |
| ATGGTTATGTTGATATGGTT+AGG | 0.342881 | 4.4:+43307800 | MS.gene64645:CDS |
| TTGCATTCTGCTGCAAGAAA+TGG | 0.353298 | 4.4:+43308646 | MS.gene64645:CDS |
| AAACAAAGGTGGCTTGCAAT+TGG | 0.357257 | 4.4:+43310330 | MS.gene64645:CDS |
| AACAAAGGTGGCTTGCAATT+GGG | 0.360089 | 4.4:+43310331 | MS.gene64645:CDS |
| ATTGGGTACTATGAGTTATT+GGG | 0.363533 | 4.4:+43310389 | MS.gene64645:CDS |
| CAGATTATCAAGTTGATACT+TGG | 0.370218 | 4.4:+43309670 | MS.gene64645:intron |
| TGAGTATGGTTATGTTGATA+TGG | 0.383585 | 4.4:+43307795 | MS.gene64645:CDS |
| TGGGAACATGGCTTCTTTGA+AGG | 0.392889 | 4.4:+43307684 | MS.gene64645:CDS |
| CAAACACGAAGAAGCGTTCA+AGG | 0.397506 | 4.4:+43309916 | MS.gene64645:CDS |
| TGCTGCAAGAAATGGACATT+TGG | 0.400973 | 4.4:+43308654 | MS.gene64645:CDS |
| TATTATTGGGACTACCATAA+TGG | 0.409865 | 4.4:+43310359 | MS.gene64645:CDS |
| ACCATAATGGCTACAACATT+GGG | 0.411626 | 4.4:+43310372 | MS.gene64645:CDS |
| TTTCATCTCCCTCGCGGTTG+TGG | 0.414269 | 4.4:+43310170 | MS.gene64645:CDS |
| TACCATAATGGCTACAACAT+TGG | 0.414943 | 4.4:+43310371 | MS.gene64645:CDS |
| GGATCGTCCACGAATTGGCC+TGG | 0.416257 | 4.4:-43310054 | None:intergenic |
| TCTTTGAAGGATACAGTTGA+TGG | 0.424259 | 4.4:+43307697 | MS.gene64645:CDS |
| GCTGGAATTAAAGCTAGAAA+TGG | 0.430155 | 4.4:+43307853 | MS.gene64645:CDS |
| TTACATTCGGCAGCAAGAGC+TGG | 0.434837 | 4.4:+43307664 | MS.gene64645:CDS |
| AGCCTCAGGCTGCACCAGTA+AGG | 0.434924 | 4.4:+43307587 | MS.gene64645:CDS |
| TATTATGATCTTGCTGATGC+TGG | 0.442983 | 4.4:+43307835 | MS.gene64645:CDS |
| ATAAACATGGTTGATAATAA+GGG | 0.448264 | 4.4:+43308817 | MS.gene64645:CDS |
| GCAGCCATCTTCACCGTCCC+AGG | 0.449913 | 4.4:+43310036 | MS.gene64645:CDS |
| CGATGATACGCCGTTACATT+CGG | 0.459070 | 4.4:+43307651 | MS.gene64645:CDS |
| TGGTTATGTTGATATGGTTA+GGG | 0.459988 | 4.4:+43307801 | MS.gene64645:CDS |
| GGCGCTTCACATGGCTGTGA+AGG | 0.462145 | 4.4:+43308744 | MS.gene64645:CDS |
| TTAGACACAGCGGAGAAAAC+AGG | 0.464410 | 4.4:+43309742 | MS.gene64645:CDS |
| AGCTGAAACTGTGCAGCCTC+AGG | 0.466637 | 4.4:+43307573 | MS.gene64645:CDS |
| AGTATTCATCGTGTTTGATT+CGG | 0.466809 | 4.4:+43310140 | MS.gene64645:CDS |
| ACAAAGGTGGCTTGCAATTG+GGG | 0.480789 | 4.4:+43310332 | MS.gene64645:CDS |
| GCGATTCTTGAGAAGGAGCC+AGG | 0.483357 | 4.4:+43308688 | MS.gene64645:CDS |
| GCCTCAGGCTGCACCAGTAA+GGG | 0.485466 | 4.4:+43307588 | MS.gene64645:CDS |
| GCAACAATTGCTAGAAGTAA+TGG | 0.488412 | 4.4:+43308613 | MS.gene64645:CDS |
| GATCGTCCACGAATTGGCCT+GGG | 0.491991 | 4.4:-43310053 | None:intergenic |
| CTTCATATTGCTGCTAAACA+AGG | 0.509684 | 4.4:+43307886 | MS.gene64645:CDS |
| TACATTCGGCAGCAAGAGCT+GGG | 0.514491 | 4.4:+43307665 | MS.gene64645:CDS |
| GTGAAATATCTATTAGAAGC+AGG | 0.514806 | 4.4:+43308580 | MS.gene64645:CDS |
| AAAATGACGAAACAATTGAC+GGG | 0.518046 | 4.4:+43307622 | MS.gene64645:CDS |
| CATCTCCCTCGCGGTTGTGG+TGG | 0.520207 | 4.4:+43310173 | MS.gene64645:CDS |
| CACCGTCCCAGGCCAATTCG+TGG | 0.520703 | 4.4:+43310047 | MS.gene64645:CDS |
| TTGGCCTGGGACGGTGAAGA+TGG | 0.531539 | 4.4:-43310040 | None:intergenic |
| CGAAAGCAACCGTTGCTATG+AGG | 0.535432 | 4.4:-43310014 | None:intergenic |
| CTTGGACAAAGTGAAACAAA+TGG | 0.535956 | 4.4:+43309688 | MS.gene64645:CDS |
| GCGCTTCACATGGCTGTGAA+GGG | 0.537881 | 4.4:+43308745 | MS.gene64645:CDS |
| TGCAAGAAATGGACATTTGG+AGG | 0.543958 | 4.4:+43308657 | MS.gene64645:CDS |
| CAAAGCAAAGAAGCAAATGA+TGG | 0.544079 | 4.4:+43310224 | MS.gene64645:CDS |
| TTTGACGAGTGTGTTCTAGT+TGG | 0.546084 | 4.4:-43309897 | None:intergenic |
| TCAGTCCGCGTTACAACACC+TGG | 0.546749 | 4.4:-43308706 | None:intergenic |
| GCCCTTACTGGTGCAGCCTG+AGG | 0.548134 | 4.4:-43307589 | None:intergenic |
| TACAGTTGATGGTGCAGAAG+AGG | 0.548363 | 4.4:+43307708 | MS.gene64645:CDS |
| TTGTGTTGCAGCAGTGTGCA+AGG | 0.551289 | 4.4:-43308542 | None:intergenic |
| GGCAGCAAGAGCTGGGAACA+TGG | 0.556799 | 4.4:+43307672 | MS.gene64645:CDS |
| CGCTTCACATGGCTGTGAAG+GGG | 0.560548 | 4.4:+43308746 | MS.gene64645:CDS |
| GAAAATGACGAAACAATTGA+CGG | 0.563779 | 4.4:+43307621 | MS.gene64645:CDS |
| TGTGAAAGCGATTCTTGAGA+AGG | 0.565310 | 4.4:+43308681 | MS.gene64645:CDS |
| GCAGAGTCTTGTGGTAGTAG+AGG | 0.567525 | 4.4:+43308768 | MS.gene64645:CDS |
| ATTAGAAGCAGGTAGTAGCT+TGG | 0.570550 | 4.4:+43308591 | MS.gene64645:CDS |
| CTGCACCAGTAAGGGCTCAA+AGG | 0.574302 | 4.4:+43307596 | MS.gene64645:CDS |
| GAGGACCGCGACGACTGTTG+TGG | 0.574532 | 4.4:-43309995 | None:intergenic |
| TTCATATTGCTGCTAAACAA+GGG | 0.576566 | 4.4:+43307887 | MS.gene64645:CDS |
| ACAGTTGATGGTGCAGAAGA+GGG | 0.580772 | 4.4:+43307709 | MS.gene64645:CDS |
| TGCAAGGCTGTTGTGTTGGA+CGG | 0.580949 | 4.4:-43308526 | None:intergenic |
| ATATTTGCAAAGCAGAATCA+AGG | 0.582207 | 4.4:+43307745 | MS.gene64645:CDS |
| AACCAGGAAGGGAAGAACTC+AGG | 0.589165 | 4.4:+43308861 | MS.gene64645:CDS |
| CTCAACAAAATGCACACAGA+AGG | 0.589714 | 4.4:+43309952 | MS.gene64645:CDS |
| TTGCACACTGCTGCAACACA+AGG | 0.589896 | 4.4:+43308544 | MS.gene64645:CDS |
| GGCATGGCAGTAAACAAAAG+TGG | 0.596158 | 4.4:+43309709 | MS.gene64645:CDS |
| GCTCTTGCTGCCGAATGTAA+CGG | 0.602344 | 4.4:-43307661 | None:intergenic |
| GGGACAGACGGCGCTTCACA+TGG | 0.602708 | 4.4:+43308735 | MS.gene64645:CDS |
| ATACCTCGAGGAAAATCCCT+TGG | 0.605699 | 4.4:+43310084 | MS.gene64645:CDS |
| GAGTGTGTTCTAGTTGGTGA+TGG | 0.607313 | 4.4:-43309891 | None:intergenic |
| TCATATTGCTGCTAAACAAG+GGG | 0.612141 | 4.4:+43307888 | MS.gene64645:CDS |
| TTGCATATAGCAACCAGGAA+GGG | 0.612446 | 4.4:+43308850 | MS.gene64645:CDS |
| CAGCGTTGCATATAGCAACC+AGG | 0.616173 | 4.4:+43308845 | MS.gene64645:CDS |
| TGTGAAGGGGCAGAGTCTTG+TGG | 0.617503 | 4.4:+43308759 | MS.gene64645:CDS |
| TTCTGAATTGTCAATGACTG+TGG | 0.617789 | 4.4:+43308501 | MS.gene64645:CDS |
| CACGATGAATACTAGAAACG+CGG | 0.624298 | 4.4:-43310130 | None:intergenic |
| GTTGCATATAGCAACCAGGA+AGG | 0.628632 | 4.4:+43308849 | MS.gene64645:CDS |
| ACAAAGTGAAACAAATGGCA+TGG | 0.631554 | 4.4:+43309693 | MS.gene64645:CDS |
| GTCCACGAATTGGCCTGGGA+CGG | 0.639953 | 4.4:-43310049 | None:intergenic |
| AGTGTGCAAGGCTGTTGTGT+TGG | 0.641164 | 4.4:-43308530 | None:intergenic |
| CTATTATTAACAAACTAATG+TGG | 0.644964 | 4.4:+43310247 | MS.gene64645:CDS |
| AAAAGCATTCTTACAGAACA+CGG | 0.650500 | 4.4:+43309778 | MS.gene64645:CDS |
| CGTCGCGGTCCTCATAGCAA+CGG | 0.655824 | 4.4:+43310005 | MS.gene64645:CDS |
| AGATCCATCAACAATAAACA+TGG | 0.658313 | 4.4:+43308804 | MS.gene64645:CDS |
| AGGAGCCAGGTGTTGTAACG+CGG | 0.665895 | 4.4:+43308701 | MS.gene64645:CDS |
| TTGAACCACCACAACCGCGA+GGG | 0.673202 | 4.4:-43310178 | None:intergenic |
| ACGATGAATACTAGAAACGC+GGG | 0.673783 | 4.4:-43310129 | None:intergenic |
| TTTGCAAAGCAGAATCAAGG+TGG | 0.681219 | 4.4:+43307748 | MS.gene64645:CDS |
| AAACTCCACAACAGTCGTCG+CGG | 0.698686 | 4.4:+43309990 | MS.gene64645:CDS |
| TTTGAACCACCACAACCGCG+AGG | 0.726688 | 4.4:-43310179 | None:intergenic |
| AAATGACGAAACAATTGACG+GGG | 0.731993 | 4.4:+43307623 | MS.gene64645:CDS |
| GATCCAAAACACATACCTCG+AGG | 0.745710 | 4.4:+43310072 | MS.gene64645:CDS |
| CGAAACAGCATTAGACACAG+CGG | 0.776505 | 4.4:+43309732 | MS.gene64645:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTCAATCCTAAAAAAT+TGG | + | chr4.4:43309212-43309231 | MS.gene64645:intron | 15.0% |
| !!! | AATCTTGATATTTTAAATTG+CGG | + | chr4.4:43307990-43308009 | MS.gene64645:intron | 15.0% |
| !! | AGATATTGTAAAGATCTTAA+TGG | + | chr4.4:43308471-43308490 | MS.gene64645:intron | 20.0% |
| !! | ATACAATTCAATTATGCATA+AGG | - | chr4.4:43309575-43309594 | None:intergenic | 20.0% |
| !! | CTATTATTAACAAACTAATG+TGG | + | chr4.4:43310247-43310266 | MS.gene64645:CDS | 20.0% |
| !!! | AATAAACATGGTTGATAATA+AGG | + | chr4.4:43308816-43308835 | MS.gene64645:CDS | 20.0% |
| !!! | ACGTTATAAACCAATTTTTT+AGG | - | chr4.4:43309225-43309244 | None:intergenic | 20.0% |
| !!! | ATAAACATGGTTGATAATAA+GGG | + | chr4.4:43308817-43308836 | MS.gene64645:CDS | 20.0% |
| !!! | ATCTATTTTATTTTGAACCA+GGG | + | chr4.4:43308422-43308441 | MS.gene64645:intron | 20.0% |
| !!! | CATTTCTATTATTCAAGTTT+AGG | - | chr4.4:43308332-43308351 | None:intergenic | 20.0% |
| !!! | TATCTATTTTATTTTGAACC+AGG | + | chr4.4:43308421-43308440 | MS.gene64645:intron | 20.0% |
| ! | AAAATTCTATGACTGCAATT+TGG | - | chr4.4:43308122-43308141 | None:intergenic | 25.0% |
| ! | AAATGTTAGCAGAATTATGT+TGG | - | chr4.4:43308902-43308921 | None:intergenic | 25.0% |
| ! | AACAAGATTTGATCAATGTT+CGG | - | chr4.4:43308374-43308393 | None:intergenic | 25.0% |
| ! | AACATTGATCAAATCTTGTT+TGG | + | chr4.4:43308374-43308393 | MS.gene64645:intron | 25.0% |
| ! | AATAATAGAAATGTGTTGCA+AGG | + | chr4.4:43308339-43308358 | MS.gene64645:intron | 25.0% |
| ! | AATCTGAACAGAGTTTATAA+AGG | - | chr4.4:43309257-43309276 | None:intergenic | 25.0% |
| ! | ACTGTTAATGTAAAGAACAT+AGG | + | chr4.4:43309379-43309398 | MS.gene64645:intron | 25.0% |
| ! | ACTTTGAACAAAGATAAAGA+AGG | - | chr4.4:43309077-43309096 | None:intergenic | 25.0% |
| ! | CAACTTGTGTTTATTTACTA+CGG | - | chr4.4:43308298-43308317 | None:intergenic | 25.0% |
| ! | CTTTGAACAAAGATAAAGAA+GGG | - | chr4.4:43309076-43309095 | None:intergenic | 25.0% |
| ! | TATGTGAATAATGTGTTAGA+TGG | + | chr4.4:43309146-43309165 | MS.gene64645:intron | 25.0% |
| ! | TTGAATTGTATCTACCTATT+TGG | + | chr4.4:43309584-43309603 | MS.gene64645:intron | 25.0% |
| !! | AATTAACCTCTATCAACTTT+TGG | + | chr4.4:43309642-43309661 | MS.gene64645:intron | 25.0% |
| !!! | TTTTAAAAGAAAACCTTGAG+TGG | + | chr4.4:43308140-43308159 | MS.gene64645:intron | 25.0% |
| AAAATGACGAAACAATTGAC+GGG | + | chr4.4:43307622-43307641 | MS.gene64645:CDS | 30.0% | |
| AACCTATTCACTTATCAGTA+AGG | - | chr4.4:43308254-43308273 | None:intergenic | 30.0% | |
| AACTCAGGTAAATTTGACTA+TGG | + | chr4.4:43308876-43308895 | MS.gene64645:intron | 30.0% | |
| AATCTCAGTTCTGTTGTTAT+TGG | + | chr4.4:43308223-43308242 | MS.gene64645:intron | 30.0% | |
| AGATCCATCAACAATAAACA+TGG | + | chr4.4:43308804-43308823 | MS.gene64645:CDS | 30.0% | |
| AGTATTCATCGTGTTTGATT+CGG | + | chr4.4:43310140-43310159 | MS.gene64645:CDS | 30.0% | |
| ATATTTGCAAAGCAGAATCA+AGG | + | chr4.4:43307745-43307764 | MS.gene64645:CDS | 30.0% | |
| ATGGTTATGTTGATATGGTT+AGG | + | chr4.4:43307800-43307819 | MS.gene64645:CDS | 30.0% | |
| ATTGGGTACTATGAGTTATT+GGG | + | chr4.4:43310389-43310408 | MS.gene64645:CDS | 30.0% | |
| CAATTGGGGTAACTATTATT+GGG | + | chr4.4:43310346-43310365 | MS.gene64645:CDS | 30.0% | |
| CATGTCGTCACTTAAAATTT+CGG | + | chr4.4:43309001-43309020 | MS.gene64645:intron | 30.0% | |
| CTATGAAGTACAAACACTTA+CGG | - | chr4.4:43309473-43309492 | None:intergenic | 30.0% | |
| GAAAATGACGAAACAATTGA+CGG | + | chr4.4:43307621-43307640 | MS.gene64645:CDS | 30.0% | |
| GACATGTTTATCAACAAAGA+TGG | - | chr4.4:43308987-43309006 | None:intergenic | 30.0% | |
| GTGAAATATCTATTAGAAGC+AGG | + | chr4.4:43308580-43308599 | MS.gene64645:CDS | 30.0% | |
| TATTATTGGGACTACCATAA+TGG | + | chr4.4:43310359-43310378 | MS.gene64645:CDS | 30.0% | |
| TCAACCATGTTTATTGTTGA+TGG | - | chr4.4:43308811-43308830 | None:intergenic | 30.0% | |
| TGAGTATGGTTATGTTGATA+TGG | + | chr4.4:43307795-43307814 | MS.gene64645:CDS | 30.0% | |
| TGGTTATGTTGATATGGTTA+GGG | + | chr4.4:43307801-43307820 | MS.gene64645:CDS | 30.0% | |
| TTCATATTGCTGCTAAACAA+GGG | + | chr4.4:43307887-43307906 | MS.gene64645:CDS | 30.0% | |
| ! | GTTCTTTTGTGTTTTGTGAA+AGG | + | chr4.4:43307955-43307974 | MS.gene64645:intron | 30.0% |
| ! | TGTTTTCGGTTGAGATTTTA+TGG | - | chr4.4:43309821-43309840 | None:intergenic | 30.0% |
| ! | TTACTACGGTTTAGTTTACA+AGG | - | chr4.4:43308284-43308303 | None:intergenic | 30.0% |
| !! | AAAAGCATTCTTACAGAACA+CGG | + | chr4.4:43309778-43309797 | MS.gene64645:CDS | 30.0% |
| !! | CAGATTATCAAGTTGATACT+TGG | + | chr4.4:43309670-43309689 | MS.gene64645:intron | 30.0% |
| !!! | CTTTGTCTTTTTTAGTTGTG+GGG | + | chr4.4:43310304-43310323 | MS.gene64645:intron | 30.0% |
| !!! | GCTTATATCTGTGTCATTTT+TGG | + | chr4.4:43310281-43310300 | MS.gene64645:intron | 30.0% |
| !!! | GCTTTGTCTTTTTTAGTTGT+GGG | + | chr4.4:43310303-43310322 | MS.gene64645:intron | 30.0% |
| AAACTGTTAGAACAAAACCC+TGG | - | chr4.4:43308442-43308461 | None:intergenic | 35.0% | |
| AAAGCACAAAATGAGCAACT+TGG | - | chr4.4:43308178-43308197 | None:intergenic | 35.0% | |
| AAATGACGAAACAATTGACG+GGG | + | chr4.4:43307623-43307642 | MS.gene64645:CDS | 35.0% | |
| AAGATAGTGTTCACAAGAAG+TGG | + | chr4.4:43308945-43308964 | MS.gene64645:intron | 35.0% | |
| ACAAAGTGAAACAAATGGCA+TGG | + | chr4.4:43309693-43309712 | MS.gene64645:CDS | 35.0% | |
| ACAAGGGGATTTAGGTATTA+TGG | + | chr4.4:43307903-43307922 | MS.gene64645:intron | 35.0% | |
| ACCATAATGGCTACAACATT+GGG | + | chr4.4:43310372-43310391 | MS.gene64645:CDS | 35.0% | |
| ACTTCATAGCTGCTAATTCT+TGG | + | chr4.4:43309484-43309503 | MS.gene64645:intron | 35.0% | |
| AGTGCTTTGTAGGATAATAG+CGG | - | chr4.4:43309313-43309332 | None:intergenic | 35.0% | |
| ATCCAGCACTTAATCCAAAT+AGG | - | chr4.4:43309601-43309620 | None:intergenic | 35.0% | |
| ATCTCACAAACTGTGTTTGT+AGG | - | chr4.4:43309043-43309062 | None:intergenic | 35.0% | |
| ATGTAAAGAACATAGGACAC+CGG | + | chr4.4:43309386-43309405 | MS.gene64645:intron | 35.0% | |
| CAAAGCAAAGAAGCAAATGA+TGG | + | chr4.4:43310224-43310243 | MS.gene64645:CDS | 35.0% | |
| CATTGGGTACTATGAGTTAT+TGG | + | chr4.4:43310388-43310407 | MS.gene64645:CDS | 35.0% | |
| CCCTTACACATACCAAAATT+GGG | + | chr4.4:43309118-43309137 | MS.gene64645:intron | 35.0% | |
| CTTCATAGCTGCTAATTCTT+GGG | + | chr4.4:43309485-43309504 | MS.gene64645:intron | 35.0% | |
| CTTCATATTGCTGCTAAACA+AGG | + | chr4.4:43307886-43307905 | MS.gene64645:CDS | 35.0% | |
| CTTGGACAAAGTGAAACAAA+TGG | + | chr4.4:43309688-43309707 | MS.gene64645:CDS | 35.0% | |
| CTTTGTTCAAAGTGTGACTT+GGG | + | chr4.4:43309084-43309103 | MS.gene64645:intron | 35.0% | |
| GCAACAATTGCTAGAAGTAA+TGG | + | chr4.4:43308613-43308632 | MS.gene64645:CDS | 35.0% | |
| GCAATTGGGGTAACTATTAT+TGG | + | chr4.4:43310345-43310364 | MS.gene64645:CDS | 35.0% | |
| GCTGGAATTAAAGCTAGAAA+TGG | + | chr4.4:43307853-43307872 | MS.gene64645:CDS | 35.0% | |
| GTACAAACACTTACGGAATT+AGG | - | chr4.4:43309466-43309485 | None:intergenic | 35.0% | |
| GTGTCATAAAAATCCACTCA+AGG | - | chr4.4:43308156-43308175 | None:intergenic | 35.0% | |
| TACCATAATGGCTACAACAT+TGG | + | chr4.4:43310371-43310390 | MS.gene64645:CDS | 35.0% | |
| TACCTATTTGGATTAAGTGC+TGG | + | chr4.4:43309596-43309615 | MS.gene64645:intron | 35.0% | |
| TAGTTGTGGGGAAAAAACAA+AGG | + | chr4.4:43310316-43310335 | MS.gene64645:intron | 35.0% | |
| TATTATGATCTTGCTGATGC+TGG | + | chr4.4:43307835-43307854 | MS.gene64645:CDS | 35.0% | |
| TCATATTGCTGCTAAACAAG+GGG | + | chr4.4:43307888-43307907 | MS.gene64645:CDS | 35.0% | |
| TCTTTGTTCAAAGTGTGACT+TGG | + | chr4.4:43309083-43309102 | MS.gene64645:intron | 35.0% | |
| TGAACTCGTATGATACCTAT+TGG | - | chr4.4:43309414-43309433 | None:intergenic | 35.0% | |
| TGCCTTACTGATAAGTGAAT+AGG | + | chr4.4:43308249-43308268 | MS.gene64645:intron | 35.0% | |
| TGTCAATGTCGTATATGTGT+CGG | - | chr4.4:43309340-43309359 | None:intergenic | 35.0% | |
| TGTCTTCGCAATCATAATTG+AGG | - | chr4.4:43308077-43308096 | None:intergenic | 35.0% | |
| TTCATAGCTGCTAATTCTTG+GGG | + | chr4.4:43309486-43309505 | MS.gene64645:intron | 35.0% | |
| TTCTGAATTGTCAATGACTG+TGG | + | chr4.4:43308501-43308520 | MS.gene64645:CDS | 35.0% | |
| TTGGTACTATCCTAGAACTT+GGG | + | chr4.4:43309183-43309202 | MS.gene64645:intron | 35.0% | |
| TTTGTGAAAGGAGTAATGAG+TGG | + | chr4.4:43307967-43307986 | MS.gene64645:intron | 35.0% | |
| ! | GTATGTGTAAGGGGTATATA+GGG | - | chr4.4:43309111-43309130 | None:intergenic | 35.0% |
| ! | TCTTTGAAGGATACAGTTGA+TGG | + | chr4.4:43307697-43307716 | MS.gene64645:CDS | 35.0% |
| !! | CCAATTTTGGTATGTGTAAG+GGG | - | chr4.4:43309120-43309139 | None:intergenic | 35.0% |
| !! | CCCAATTTTGGTATGTGTAA+GGG | - | chr4.4:43309121-43309140 | None:intergenic | 35.0% |
| !! | GATTAAGTGCTGGATTATTC+AGG | + | chr4.4:43309606-43309625 | MS.gene64645:intron | 35.0% |
| !! | GCATTTCCAAAAGTTGATAG+AGG | - | chr4.4:43309651-43309670 | None:intergenic | 35.0% |
| !!! | GGCTTTGTCTTTTTTAGTTG+TGG | + | chr4.4:43310302-43310321 | MS.gene64645:intron | 35.0% |
| ACACATACCAAAATTGGGCT+TGG | + | chr4.4:43309123-43309142 | MS.gene64645:intron | 40.0% | |
| ACCCAATGTTGTAGCCATTA+TGG | - | chr4.4:43310376-43310395 | None:intergenic | 40.0% | |
| ACGATGAATACTAGAAACGC+GGG | - | chr4.4:43310132-43310151 | None:intergenic | 40.0% | |
| ATTAGAAGCAGGTAGTAGCT+TGG | + | chr4.4:43308591-43308610 | MS.gene64645:CDS | 40.0% | |
| CACGATGAATACTAGAAACG+CGG | - | chr4.4:43310133-43310152 | None:intergenic | 40.0% | |
| CCCCTTACACATACCAAAAT+TGG | + | chr4.4:43309117-43309136 | MS.gene64645:intron | 40.0% | |
| CTCAACAAAATGCACACAGA+AGG | + | chr4.4:43309952-43309971 | MS.gene64645:CDS | 40.0% | |
| CTTGGTACTATCCTAGAACT+TGG | + | chr4.4:43309182-43309201 | MS.gene64645:intron | 40.0% | |
| CTTTATGTTGCTGCTGAGTA+TGG | + | chr4.4:43307781-43307800 | MS.gene64645:CDS | 40.0% | |
| GACTGATAAAAAGGGACAGA+CGG | + | chr4.4:43308723-43308742 | MS.gene64645:CDS | 40.0% | |
| GTGCTTTGTAGGATAATAGC+GGG | - | chr4.4:43309312-43309331 | None:intergenic | 40.0% | |
| TGCAAGAAATGGACATTTGG+AGG | + | chr4.4:43308657-43308676 | MS.gene64645:CDS | 40.0% | |
| TGCTGCAAGAAATGGACATT+TGG | + | chr4.4:43308654-43308673 | MS.gene64645:CDS | 40.0% | |
| TGCTTTGTAGGATAATAGCG+GGG | - | chr4.4:43309311-43309330 | None:intergenic | 40.0% | |
| TGTGAAAGCGATTCTTGAGA+AGG | + | chr4.4:43308681-43308700 | MS.gene64645:CDS | 40.0% | |
| TGTTAGATGGCTTGATGAAC+AGG | + | chr4.4:43309159-43309178 | MS.gene64645:intron | 40.0% | |
| TTAAGCACAACCCAAGTTCT+AGG | - | chr4.4:43309196-43309215 | None:intergenic | 40.0% | |
| TTGCATATAGCAACCAGGAA+GGG | + | chr4.4:43308850-43308869 | MS.gene64645:CDS | 40.0% | |
| TTGCATTCTGCTGCAAGAAA+TGG | + | chr4.4:43308646-43308665 | MS.gene64645:CDS | 40.0% | |
| TTGTGGGGAAAAAACAAAGG+TGG | + | chr4.4:43310319-43310338 | MS.gene64645:CDS | 40.0% | |
| TTTGACGAGTGTGTTCTAGT+TGG | - | chr4.4:43309900-43309919 | None:intergenic | 40.0% | |
| TTTGCAAAGCAGAATCAAGG+TGG | + | chr4.4:43307748-43307767 | MS.gene64645:CDS | 40.0% | |
| ! | AAACAAAGGTGGCTTGCAAT+TGG | + | chr4.4:43310330-43310349 | MS.gene64645:CDS | 40.0% |
| ! | AACAAAGGTGGCTTGCAATT+GGG | + | chr4.4:43310331-43310350 | MS.gene64645:CDS | 40.0% |
| ! | GGTATGTGTAAGGGGTATAT+AGG | - | chr4.4:43309112-43309131 | None:intergenic | 40.0% |
| ! | GTAACGCGGACTGATAAAAA+GGG | + | chr4.4:43308715-43308734 | MS.gene64645:CDS | 40.0% |
| ! | TCACATACCAAGCCCAATTT+TGG | - | chr4.4:43309133-43309152 | None:intergenic | 40.0% |
| ! | TGTAACGCGGACTGATAAAA+AGG | + | chr4.4:43308714-43308733 | MS.gene64645:CDS | 40.0% |
| ! | TTTCCTCGAGGTATGTGTTT+TGG | - | chr4.4:43310078-43310097 | None:intergenic | 40.0% |
| !! | GCCCAATTTTGGTATGTGTA+AGG | - | chr4.4:43309122-43309141 | None:intergenic | 40.0% |
| !! | TCTCTTGTTGCAGCTGTTTT+CGG | - | chr4.4:43309835-43309854 | None:intergenic | 40.0% |
| !!! | AAGCTATTTTTGCTTCGCCA+AGG | - | chr4.4:43310104-43310123 | None:intergenic | 40.0% |
| !!! | AGCTATTTTTGCTTCGCCAA+GGG | - | chr4.4:43310103-43310122 | None:intergenic | 40.0% |
| ATACCTCGAGGAAAATCCCT+TGG | + | chr4.4:43310084-43310103 | MS.gene64645:CDS | 45.0% | |
| CGAAACAGCATTAGACACAG+CGG | + | chr4.4:43309732-43309751 | MS.gene64645:CDS | 45.0% | |
| CGATGATACGCCGTTACATT+CGG | + | chr4.4:43307651-43307670 | MS.gene64645:CDS | 45.0% | |
| CGTATGATACCTATTGGTGC+CGG | - | chr4.4:43309408-43309427 | None:intergenic | 45.0% | |
| GATCCAAAACACATACCTCG+AGG | + | chr4.4:43310072-43310091 | MS.gene64645:CDS | 45.0% | |
| GCTGCTAAACAAGGGGATTT+AGG | + | chr4.4:43307895-43307914 | MS.gene64645:CDS | 45.0% | |
| GGCATGGCAGTAAACAAAAG+TGG | + | chr4.4:43309709-43309728 | MS.gene64645:CDS | 45.0% | |
| GTTGCATATAGCAACCAGGA+AGG | + | chr4.4:43308849-43308868 | MS.gene64645:CDS | 45.0% | |
| TGGGAACATGGCTTCTTTGA+AGG | + | chr4.4:43307684-43307703 | MS.gene64645:CDS | 45.0% | |
| TTAGACACAGCGGAGAAAAC+AGG | + | chr4.4:43309742-43309761 | MS.gene64645:CDS | 45.0% | |
| TTCTTCCTTTGAGCCCTTAC+TGG | - | chr4.4:43307604-43307623 | None:intergenic | 45.0% | |
| TTGCGGTTGAAGTCATGTTG+CGG | + | chr4.4:43308007-43308026 | MS.gene64645:intron | 45.0% | |
| ! | ACAAAGGTGGCTTGCAATTG+GGG | + | chr4.4:43310332-43310351 | MS.gene64645:CDS | 45.0% |
| !! | ACAGTTGATGGTGCAGAAGA+GGG | + | chr4.4:43307709-43307728 | MS.gene64645:CDS | 45.0% |
| !! | CAAACACGAAGAAGCGTTCA+AGG | + | chr4.4:43309916-43309935 | MS.gene64645:CDS | 45.0% |
| !! | GAGTGTGTTCTAGTTGGTGA+TGG | - | chr4.4:43309894-43309913 | None:intergenic | 45.0% |
| !! | GTTTTGGATCGTCCACGAAT+TGG | - | chr4.4:43310062-43310081 | None:intergenic | 45.0% |
| !! | TACAGTTGATGGTGCAGAAG+AGG | + | chr4.4:43307708-43307727 | MS.gene64645:CDS | 45.0% |
| AAACTCCACAACAGTCGTCG+CGG | + | chr4.4:43309990-43310009 | MS.gene64645:CDS | 50.0% | |
| AACCAGGAAGGGAAGAACTC+AGG | + | chr4.4:43308861-43308880 | MS.gene64645:CDS | 50.0% | |
| AGTGTGCAAGGCTGTTGTGT+TGG | - | chr4.4:43308533-43308552 | None:intergenic | 50.0% | |
| CAGCGTTGCATATAGCAACC+AGG | + | chr4.4:43308845-43308864 | MS.gene64645:CDS | 50.0% | |
| CGAAAGCAACCGTTGCTATG+AGG | - | chr4.4:43310017-43310036 | None:intergenic | 50.0% | |
| GATGGCTTGATGAACAGGCT+TGG | + | chr4.4:43309164-43309183 | MS.gene64645:intron | 50.0% | |
| GCTCTTGCTGCCGAATGTAA+CGG | - | chr4.4:43307664-43307683 | None:intergenic | 50.0% | |
| TACATTCGGCAGCAAGAGCT+GGG | + | chr4.4:43307665-43307684 | MS.gene64645:CDS | 50.0% | |
| TACCTGAGTTCTTCCCTTCC+TGG | - | chr4.4:43308866-43308885 | None:intergenic | 50.0% | |
| TGCAAGGCTGTTGTGTTGGA+CGG | - | chr4.4:43308529-43308548 | None:intergenic | 50.0% | |
| TGTCGGAGTCAGTGCTTTGT+AGG | - | chr4.4:43309323-43309342 | None:intergenic | 50.0% | |
| TTACATTCGGCAGCAAGAGC+TGG | + | chr4.4:43307664-43307683 | MS.gene64645:CDS | 50.0% | |
| TTGCACACTGCTGCAACACA+AGG | + | chr4.4:43308544-43308563 | MS.gene64645:CDS | 50.0% | |
| TTGTGTTGCAGCAGTGTGCA+AGG | - | chr4.4:43308545-43308564 | None:intergenic | 50.0% | |
| ! | GCAGAGTCTTGTGGTAGTAG+AGG | + | chr4.4:43308768-43308787 | MS.gene64645:CDS | 50.0% |
| AGCTGAAACTGTGCAGCCTC+AGG | + | chr4.4:43307573-43307592 | MS.gene64645:CDS | 55.0% | |
| CATAGGACACCGGCACCAAT+AGG | + | chr4.4:43309396-43309415 | MS.gene64645:intron | 55.0% | |
| CGCTTCACATGGCTGTGAAG+GGG | + | chr4.4:43308746-43308765 | MS.gene64645:CDS | 55.0% | |
| CTGCACCAGTAAGGGCTCAA+AGG | + | chr4.4:43307596-43307615 | MS.gene64645:CDS | 55.0% | |
| GCGATTCTTGAGAAGGAGCC+AGG | + | chr4.4:43308688-43308707 | MS.gene64645:CDS | 55.0% | |
| GCGCTTCACATGGCTGTGAA+GGG | + | chr4.4:43308745-43308764 | MS.gene64645:CDS | 55.0% | |
| TCAGTCCGCGTTACAACACC+TGG | - | chr4.4:43308709-43308728 | None:intergenic | 55.0% | |
| TGTGAAGGGGCAGAGTCTTG+TGG | + | chr4.4:43308759-43308778 | MS.gene64645:CDS | 55.0% | |
| TTGAACCACCACAACCGCGA+GGG | - | chr4.4:43310181-43310200 | None:intergenic | 55.0% | |
| TTTCATCTCCCTCGCGGTTG+TGG | + | chr4.4:43310170-43310189 | MS.gene64645:CDS | 55.0% | |
| TTTGAACCACCACAACCGCG+AGG | - | chr4.4:43310182-43310201 | None:intergenic | 55.0% | |
| ! | AGGAGCCAGGTGTTGTAACG+CGG | + | chr4.4:43308701-43308720 | MS.gene64645:CDS | 55.0% |
| ! | GATCGTCCACGAATTGGCCT+GGG | - | chr4.4:43310056-43310075 | None:intergenic | 55.0% |
| ! | TCGCCAAGGGATTTTCCTCG+AGG | - | chr4.4:43310090-43310109 | None:intergenic | 55.0% |
| AGCCTCAGGCTGCACCAGTA+AGG | + | chr4.4:43307587-43307606 | MS.gene64645:CDS | 60.0% | |
| CGTCGCGGTCCTCATAGCAA+CGG | + | chr4.4:43310005-43310024 | MS.gene64645:CDS | 60.0% | |
| GCCTCAGGCTGCACCAGTAA+GGG | + | chr4.4:43307588-43307607 | MS.gene64645:CDS | 60.0% | |
| GGATCGTCCACGAATTGGCC+TGG | - | chr4.4:43310057-43310076 | None:intergenic | 60.0% | |
| GGCAGCAAGAGCTGGGAACA+TGG | + | chr4.4:43307672-43307691 | MS.gene64645:CDS | 60.0% | |
| GGCGCTTCACATGGCTGTGA+AGG | + | chr4.4:43308744-43308763 | MS.gene64645:CDS | 60.0% | |
| TTGGCCTGGGACGGTGAAGA+TGG | - | chr4.4:43310043-43310062 | None:intergenic | 60.0% | |
| ! | CGCGCTTTTCATCTCCCTCG+CGG | + | chr4.4:43310164-43310183 | MS.gene64645:CDS | 60.0% |
| ! | GTCCACGAATTGGCCTGGGA+CGG | - | chr4.4:43310052-43310071 | None:intergenic | 60.0% |
| CACCGTCCCAGGCCAATTCG+TGG | + | chr4.4:43310047-43310066 | MS.gene64645:CDS | 65.0% | |
| CATCTCCCTCGCGGTTGTGG+TGG | + | chr4.4:43310173-43310192 | MS.gene64645:CDS | 65.0% | |
| GAGGACCGCGACGACTGTTG+TGG | - | chr4.4:43309998-43310017 | None:intergenic | 65.0% | |
| GCAGCCATCTTCACCGTCCC+AGG | + | chr4.4:43310036-43310055 | MS.gene64645:CDS | 65.0% | |
| GCCCTTACTGGTGCAGCCTG+AGG | - | chr4.4:43307592-43307611 | None:intergenic | 65.0% | |
| GGGACAGACGGCGCTTCACA+TGG | + | chr4.4:43308735-43308754 | MS.gene64645:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 43307562 | 43310418 | 43307562 | ID=MS.gene64645 |
| chr4.4 | mRNA | 43307562 | 43310418 | 43307562 | ID=MS.gene64645.t1;Parent=MS.gene64645 |
| chr4.4 | exon | 43307562 | 43307916 | 43307562 | ID=MS.gene64645.t1.exon1;Parent=MS.gene64645.t1 |
| chr4.4 | CDS | 43307562 | 43307916 | 43307562 | ID=cds.MS.gene64645.t1;Parent=MS.gene64645.t1 |
| chr4.4 | exon | 43308473 | 43308882 | 43308473 | ID=MS.gene64645.t1.exon2;Parent=MS.gene64645.t1 |
| chr4.4 | CDS | 43308473 | 43308882 | 43308473 | ID=cds.MS.gene64645.t1;Parent=MS.gene64645.t1 |
| chr4.4 | exon | 43309673 | 43310268 | 43309673 | ID=MS.gene64645.t1.exon3;Parent=MS.gene64645.t1 |
| chr4.4 | CDS | 43309673 | 43310268 | 43309673 | ID=cds.MS.gene64645.t1;Parent=MS.gene64645.t1 |
| chr4.4 | exon | 43310319 | 43310418 | 43310319 | ID=MS.gene64645.t1.exon4;Parent=MS.gene64645.t1 |
| chr4.4 | CDS | 43310319 | 43310418 | 43310319 | ID=cds.MS.gene64645.t1;Parent=MS.gene64645.t1 |
| Gene Sequence |
| Protein sequence |
