Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054558.t1 | XP_013454565.1 | 97.8 | 409 | 8 | 1 | 1 | 408 | 1 | 409 | 1.80E-241 | 844.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054558.t1 | Q9LK31 | 63.8 | 400 | 130 | 3 | 20 | 405 | 27 | 425 | 1.9e-156 | 553.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054558.t1 | A0A072UGM8 | 97.8 | 409 | 8 | 1 | 1 | 408 | 1 | 409 | 1.3e-241 | 844.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053167 | MS.gene054558 | 0.840075 | 1.08E-57 | -1.69E-46 |
| MS.gene054558 | MS.gene058638 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene058639 | 0.807364 | 5.24E-50 | -1.69E-46 |
| MS.gene054558 | MS.gene060563 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene061006 | 0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene065593 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene054558 | MS.gene25109 | 0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene27287 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene054558 | MS.gene29047 | 0.801818 | 7.52E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene38070 | 0.823786 | 1.15E-53 | -1.69E-46 |
| MS.gene054558 | MS.gene39124 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene054558 | MS.gene46910 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene054558 | MS.gene48283 | 0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene054558 | MS.gene59366 | 0.815374 | 9.55E-52 | -1.69E-46 |
| MS.gene054558 | MS.gene60300 | 0.801053 | 1.08E-48 | -1.69E-46 |
| MS.gene054558 | MS.gene67881 | 0.811112 | 8.24E-51 | -1.69E-46 |
| MS.gene054558 | MS.gene69097 | 0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene054558 | MS.gene87972 | 0.801411 | 9.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054558.t1 | MTR_4g007970 | 97.800 | 409 | 8 | 1 | 1 | 408 | 1 | 409 | 0.0 | 826 |
| MS.gene054558.t1 | MTR_0018s0170 | 69.383 | 405 | 118 | 3 | 9 | 407 | 14 | 418 | 0.0 | 593 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054558.t1 | AT1G51540 | 74.447 | 407 | 89 | 4 | 13 | 407 | 11 | 414 | 0.0 | 636 |
| MS.gene054558.t1 | AT3G27220 | 62.990 | 408 | 136 | 3 | 13 | 406 | 20 | 426 | 0.0 | 544 |
Find 90 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAACTCTAGTTGGATTT+TGG | 0.130657 | 4.1:-87526272 | MS.gene054558:CDS |
| GTGATCTGCGTCGGACTTCT+AGG | 0.209800 | 4.1:-87531018 | MS.gene054558:CDS |
| AATGATCGTCTTTATGTTCT+TGG | 0.209886 | 4.1:-87527788 | MS.gene054558:CDS |
| GAAATGGCACATTCACATTT+AGG | 0.243377 | 4.1:-87529237 | MS.gene054558:CDS |
| TCAATATGTGAGTTTGGTTT+TGG | 0.271476 | 4.1:+87527512 | None:intergenic |
| GAAATTGGAACGAGGGAAAT+AGG | 0.276239 | 4.1:+87530948 | None:intergenic |
| AACAATTCCATTGTTATTGC+TGG | 0.285172 | 4.1:-87527470 | MS.gene054558:CDS |
| ACCTGCTCCTCAACTTGTTT+GGG | 0.304175 | 4.1:-87530839 | MS.gene054558:CDS |
| GCAAATTCAATATGTGAGTT+TGG | 0.314174 | 4.1:+87527506 | None:intergenic |
| AAAACTCGGTTCAGCCAAAT+TGG | 0.314857 | 4.1:-87531043 | MS.gene054558:CDS |
| TACCTGCTCCTCAACTTGTT+TGG | 0.320322 | 4.1:-87530840 | MS.gene054558:CDS |
| CCAAAGTATTCAAGTTAAAC+TGG | 0.328184 | 4.1:+87527390 | None:intergenic |
| ACCGCTCCATTGCTTTGTTT+CGG | 0.343075 | 4.1:+87529122 | None:intergenic |
| TGTGAATGTGCCATTTCTTT+TGG | 0.343344 | 4.1:+87529243 | None:intergenic |
| GCACCCTGAAACCAAGAAAA+TGG | 0.346126 | 4.1:-87527432 | MS.gene054558:CDS |
| TCACCTGTTCCTAGACTTGA+TGG | 0.347002 | 4.1:-87530802 | MS.gene054558:CDS |
| GACGCAGATCACAACCAATT+TGG | 0.352455 | 4.1:+87531029 | None:intergenic |
| GGCTGGTTGTACTTCACTTC+AGG | 0.372763 | 4.1:-87526246 | MS.gene054558:CDS |
| CCTCTCCAAAGTTGAGTTGC+CGG | 0.377037 | 4.1:+87528202 | None:intergenic |
| TATATAGTCAATGGGCAGTA+TGG | 0.395192 | 4.1:-87529189 | MS.gene054558:CDS |
| TCCCAAACAAGTTGAGGAGC+AGG | 0.438279 | 4.1:+87530838 | None:intergenic |
| GTGAGGTCCTCCACGGGGAA+TGG | 0.439679 | 4.1:+87528063 | None:intergenic |
| CCAGTTTAACTTGAATACTT+TGG | 0.440901 | 4.1:-87527390 | MS.gene054558:intron |
| TGAGGTCCTCCACGGGGAAT+GGG | 0.456202 | 4.1:+87528064 | None:intergenic |
| AGATACATTTATATAGTCAA+TGG | 0.456594 | 4.1:-87529198 | MS.gene054558:CDS |
| TATGTTCTTGGTGGTCAAGA+AGG | 0.468117 | 4.1:-87527776 | MS.gene054558:CDS |
| TGGAGTCTTGCTGTCAAGAA+TGG | 0.473803 | 4.1:-87528121 | MS.gene054558:CDS |
| TGAAGAAGCCCATAGAAAAT+CGG | 0.474601 | 4.1:+87530981 | None:intergenic |
| CGGGTGAAAACAACTCTAGT+TGG | 0.475974 | 4.1:-87526279 | MS.gene054558:CDS |
| GATCGTCTTTATGTTCTTGG+TGG | 0.479295 | 4.1:-87527785 | MS.gene054558:CDS |
| ATGCACCGGCAACTCAACTT+TGG | 0.480966 | 4.1:-87528207 | MS.gene054558:CDS |
| AAGAACATAAAGACGATCAT+TGG | 0.484359 | 4.1:+87527790 | None:intergenic |
| TCATCCAACATGTAAACATC+AGG | 0.495238 | 4.1:+87527566 | None:intergenic |
| TCCCTCCTTTGCCAGTCCCT+AGG | 0.504174 | 4.1:-87529098 | MS.gene054558:intron |
| GTTAGTTACATTATTAATGT+CGG | 0.505269 | 4.1:+87530732 | None:intergenic |
| GATACATTTATATAGTCAAT+GGG | 0.516300 | 4.1:-87529197 | MS.gene054558:CDS |
| AGGTGGGACCTCTACATTGT+GGG | 0.517328 | 4.1:+87529166 | None:intergenic |
| GCACCATCAAGTCTAGGAAC+AGG | 0.519537 | 4.1:+87530799 | None:intergenic |
| GAGAGGTCGATTGCATGTAA+TGG | 0.523115 | 4.1:-87528185 | MS.gene054558:CDS |
| GAATGACATGGTTCGTCCGT+CGG | 0.523631 | 4.1:-87531067 | None:intergenic |
| AGAGGTCGATTGCATGTAAT+GGG | 0.523894 | 4.1:-87528184 | MS.gene054558:CDS |
| GAATGGAAAAGCATTAGAAA+AGG | 0.526434 | 4.1:-87528104 | MS.gene054558:CDS |
| ACTCACATATTGAATTTGCA+TGG | 0.528766 | 4.1:-87527502 | MS.gene054558:CDS |
| AAAAGGTAGTTGGAGATATG+TGG | 0.533601 | 4.1:-87526188 | MS.gene054558:CDS |
| AGACTCCAATGTTCTAATCC+AGG | 0.535412 | 4.1:+87528136 | None:intergenic |
| CATTTAGGAATGGCGACAGA+TGG | 0.535771 | 4.1:-87529222 | MS.gene054558:CDS |
| TTGCAGAAGTGGTCTGTGAT+CGG | 0.535945 | 4.1:-87526315 | MS.gene054558:intron |
| GAAAAGCATTAGAAAAGGAG+TGG | 0.542116 | 4.1:-87528099 | MS.gene054558:CDS |
| TTCTTTAGGAACAATGATTG+TGG | 0.544550 | 4.1:+87530918 | None:intergenic |
| GAACCTGTGAGGTCCTCCAC+GGG | 0.554212 | 4.1:+87528057 | None:intergenic |
| TTCCCCGTGGAGGACCTCAC+AGG | 0.556102 | 4.1:-87528060 | MS.gene054558:intron |
| ACTCAATTTCAGATATGCAC+CGG | 0.558589 | 4.1:-87528221 | MS.gene054558:intron |
| CTCACATATTGAATTTGCAT+GGG | 0.558890 | 4.1:-87527501 | MS.gene054558:CDS |
| TGATCGGAAAGTTACCATAC+CGG | 0.559582 | 4.1:-87526299 | MS.gene054558:CDS |
| GAACGAGGGAAATAGGAAGA+TGG | 0.564903 | 4.1:+87530955 | None:intergenic |
| GGCACATTCACATTTAGGAA+TGG | 0.569145 | 4.1:-87529232 | MS.gene054558:CDS |
| TTTGATGATGGAACTTGGGG+AGG | 0.574262 | 4.1:-87529279 | MS.gene054558:CDS |
| AATTCCATTGTTATTGCTGG+AGG | 0.576103 | 4.1:-87527467 | MS.gene054558:CDS |
| ATATATACATACCTAGGGAC+TGG | 0.577408 | 4.1:+87529087 | None:intergenic |
| CTATCCTGATGTTTACATGT+TGG | 0.581139 | 4.1:-87527570 | MS.gene054558:CDS |
| ATACACCTGGATTAGAACAT+TGG | 0.581948 | 4.1:-87528141 | MS.gene054558:CDS |
| TACCTAGGGACTGGCAAAGG+AGG | 0.586983 | 4.1:+87529096 | None:intergenic |
| TGTTTCGGTGTCAAGTACAA+AGG | 0.589819 | 4.1:+87529137 | None:intergenic |
| GTTCGTCCGTCGGTAAAACT+CGG | 0.592046 | 4.1:-87531057 | MS.gene054558:CDS |
| AAATTGGTTGTGATCTGCGT+CGG | 0.599739 | 4.1:-87531027 | MS.gene054558:CDS |
| ATAGCAGCACCATCAAGTCT+AGG | 0.602814 | 4.1:+87530793 | None:intergenic |
| ACGATCATTGGCCACAACAC+AGG | 0.602958 | 4.1:+87527802 | None:intergenic |
| CACTTCAGGACAGAGAGACA+AGG | 0.609550 | 4.1:-87526232 | MS.gene054558:CDS |
| AAGTACAAAGGTATCAGAGG+TGG | 0.611306 | 4.1:+87529149 | None:intergenic |
| ACCTAGGGACTGGCAAAGGA+GGG | 0.612823 | 4.1:+87529097 | None:intergenic |
| ACATACCTAGGGACTGGCAA+AGG | 0.618922 | 4.1:+87529093 | None:intergenic |
| TAAGTGCTCACGCAGGATGG+AGG | 0.622842 | 4.1:-87527720 | MS.gene054558:intron |
| CGAACCTGTGAGGTCCTCCA+CGG | 0.624364 | 4.1:+87528056 | None:intergenic |
| CAGTATGGCCCACAATGTAG+AGG | 0.627150 | 4.1:-87529174 | MS.gene054558:CDS |
| TGTTGGATGACGAGATGAAG+TGG | 0.632038 | 4.1:-87527553 | MS.gene054558:CDS |
| GTCAAGTACAAAGGTATCAG+AGG | 0.634465 | 4.1:+87529146 | None:intergenic |
| GATCGGAAAGTTACCATACC+GGG | 0.637162 | 4.1:-87526298 | MS.gene054558:CDS |
| AAAGAGAATCGACATACACC+TGG | 0.643815 | 4.1:-87528154 | MS.gene054558:CDS |
| TTGACACCGAAACAAAGCAA+TGG | 0.649372 | 4.1:-87529128 | MS.gene054558:CDS |
| AGTACAAAGGTATCAGAGGT+GGG | 0.650373 | 4.1:+87529150 | None:intergenic |
| GAGGTGGGACCTCTACATTG+TGG | 0.657473 | 4.1:+87529165 | None:intergenic |
| ACCGAAACAAAGCAATGGAG+CGG | 0.665583 | 4.1:-87529123 | MS.gene054558:CDS |
| ACTTCAGGACAGAGAGACAA+GGG | 0.669595 | 4.1:-87526231 | MS.gene054558:CDS |
| TGTGCCTCCAGCAATAACAA+TGG | 0.669691 | 4.1:+87527463 | None:intergenic |
| GGTCGATTGCATGTAATGGG+TGG | 0.672590 | 4.1:-87528181 | MS.gene054558:CDS |
| CCGGCAACTCAACTTTGGAG+AGG | 0.698757 | 4.1:-87528202 | MS.gene054558:CDS |
| GAGATACCCATTCCCCGTGG+AGG | 0.712935 | 4.1:-87528070 | MS.gene054558:CDS |
| TATTAAGCAACGAACCTGTG+AGG | 0.715011 | 4.1:+87528046 | None:intergenic |
| AGTGAGATACCCATTCCCCG+TGG | 0.747527 | 4.1:-87528073 | MS.gene054558:CDS |
| AACCTGTGAGGTCCTCCACG+GGG | 0.758262 | 4.1:+87528058 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATAAATAAAGATTAAAA+TGG | + | chr4.1:87529320-87529339 | None:intergenic | 10.0% |
| !!! | ATAGAAATATTAAATTTTGA+AGG | + | chr4.1:87530647-87530666 | None:intergenic | 10.0% |
| !! | AATTAAAAATTGTAAAACCT+GGG | + | chr4.1:87530346-87530365 | None:intergenic | 15.0% |
| !! | ATAAATATAGTAAGATGATT+AGG | - | chr4.1:87530381-87530400 | MS.gene054558:intron | 15.0% |
| !!! | GATATATATAATTTTGATGA+TGG | - | chr4.1:87527930-87527949 | MS.gene054558:intron | 15.0% |
| !!! | TAGTTCTAATCAATATTTTA+TGG | + | chr4.1:87529293-87529312 | None:intergenic | 15.0% |
| !! | AGATACATTTATATAGTCAA+TGG | - | chr4.1:87528023-87528042 | MS.gene054558:intron | 20.0% |
| !! | ATAGTTAATTACAATTAGTG+TGG | - | chr4.1:87526683-87526702 | MS.gene054558:intron | 20.0% |
| !! | CAATTAAAAATTGTAAAACC+TGG | + | chr4.1:87530347-87530366 | None:intergenic | 20.0% |
| !! | CTATAGTTAATGAGAAAATA+TGG | - | chr4.1:87527119-87527138 | MS.gene054558:intron | 20.0% |
| !! | GATACATTTATATAGTCAAT+GGG | - | chr4.1:87528024-87528043 | MS.gene054558:intron | 20.0% |
| !! | GTGTTTAAAAGAACTTATAT+GGG | + | chr4.1:87527858-87527877 | None:intergenic | 20.0% |
| !! | GTTAGTTACATTATTAATGT+CGG | + | chr4.1:87526492-87526511 | None:intergenic | 20.0% |
| !! | TAGTTAATTACAATTAGTGT+GGG | - | chr4.1:87526684-87526703 | MS.gene054558:intron | 20.0% |
| !! | TTATATACAACAAACACTTA+AGG | + | chr4.1:87527332-87527351 | None:intergenic | 20.0% |
| !! | TTTCTGATATTTCTTTGTAA+TGG | - | chr4.1:87528214-87528233 | MS.gene054558:intron | 20.0% |
| !!! | AATGTAATTTTTCTTGTATC+TGG | - | chr4.1:87528946-87528965 | MS.gene054558:intron | 20.0% |
| !!! | ACTGATAAACATCATATTTT+AGG | - | chr4.1:87529395-87529414 | MS.gene054558:intron | 20.0% |
| !!! | ATTTTGATAAATAGCTTAGT+TGG | - | chr4.1:87527060-87527079 | MS.gene054558:intron | 20.0% |
| !!! | CTGATAAACATCATATTTTA+GGG | - | chr4.1:87529396-87529415 | MS.gene054558:intron | 20.0% |
| !!! | GTTATATTATTGTGTTTTTC+AGG | - | chr4.1:87527893-87527912 | MS.gene054558:intron | 20.0% |
| !!! | GTTTTACAATTTTTAATTGC+TGG | - | chr4.1:87530348-87530367 | MS.gene054558:intron | 20.0% |
| !!! | TAAGTGTTTGTTGTATATAA+GGG | - | chr4.1:87527332-87527351 | MS.gene054558:intron | 20.0% |
| !!! | TTAAGTGTTTGTTGTATATA+AGG | - | chr4.1:87527331-87527350 | MS.gene054558:intron | 20.0% |
| !!! | TTCTTTTGTTCTTTTTCTTT+AGG | + | chr4.1:87526320-87526339 | None:intergenic | 20.0% |
| !!! | TTGTTTTCATTTAAGCTATA+AGG | - | chr4.1:87527147-87527166 | MS.gene054558:intron | 20.0% |
| !!! | TTTTGATAAATAGCTTAGTT+GGG | - | chr4.1:87527061-87527080 | MS.gene054558:intron | 20.0% |
| !!! | TTTTTTCTTCGAATTATTAC+CGG | - | chr4.1:87530251-87530270 | MS.gene054558:intron | 20.0% |
| ! | AATTAGCTGGAAACAATTTA+TGG | - | chr4.1:87527203-87527222 | MS.gene054558:intron | 25.0% |
| ! | AATTATAAAAGCTCCATAAG+TGG | + | chr4.1:87530073-87530092 | None:intergenic | 25.0% |
| ! | ACATTCATATATACATACCT+AGG | + | chr4.1:87528143-87528162 | None:intergenic | 25.0% |
| ! | AGCTATGACATTTCATTAAA+TGG | + | chr4.1:87530542-87530561 | None:intergenic | 25.0% |
| ! | AGTTAAGGACTTATTGAATA+AGG | - | chr4.1:87527033-87527052 | MS.gene054558:intron | 25.0% |
| ! | ATAACATGTATTAGAAATCG+TGG | - | chr4.1:87527364-87527383 | MS.gene054558:intron | 25.0% |
| ! | ATTATAAAAGCTCCATAAGT+GGG | + | chr4.1:87530072-87530091 | None:intergenic | 25.0% |
| ! | CAACATAAAGAGCTATAAAA+TGG | + | chr4.1:87528299-87528318 | None:intergenic | 25.0% |
| ! | CATTCATATATACATACCTA+GGG | + | chr4.1:87528142-87528161 | None:intergenic | 25.0% |
| ! | CGTGTTTAAAAGAACTTATA+TGG | + | chr4.1:87527859-87527878 | None:intergenic | 25.0% |
| ! | GTTAAGGACTTATTGAATAA+GGG | - | chr4.1:87527034-87527053 | MS.gene054558:intron | 25.0% |
| ! | TATCAACTGAGTTGTATTTA+CGG | - | chr4.1:87526945-87526964 | MS.gene054558:intron | 25.0% |
| ! | TGAAGTTTCAAAGAAGTTAT+GGG | - | chr4.1:87528509-87528528 | MS.gene054558:intron | 25.0% |
| ! | TTGAAGTTTCAAAGAAGTTA+TGG | - | chr4.1:87528508-87528527 | MS.gene054558:intron | 25.0% |
| ! | TTGGGTGTTTATTATATAAG+TGG | - | chr4.1:87527079-87527098 | MS.gene054558:intron | 25.0% |
| ! | TTTGATGTATAGCTTAGTTA+AGG | - | chr4.1:87527018-87527037 | MS.gene054558:intron | 25.0% |
| !! | AAATAAAAGCTTGTTCGAAA+CGG | + | chr4.1:87527557-87527576 | None:intergenic | 25.0% |
| !! | ACATTTTAAATGTGGAAAAG+TGG | + | chr4.1:87526850-87526869 | None:intergenic | 25.0% |
| !! | ACTTATGGAGCTTTTATAAT+TGG | - | chr4.1:87530072-87530091 | MS.gene054558:intron | 25.0% |
| !! | AGTTTTTATGTTAAGGTTCT+TGG | - | chr4.1:87530489-87530508 | MS.gene054558:intron | 25.0% |
| !! | ATTTTAAATGTGGAAAAGTG+GGG | + | chr4.1:87526848-87526867 | None:intergenic | 25.0% |
| !! | CAGTTAAATTAGTTTCAAGT+TGG | + | chr4.1:87526751-87526770 | None:intergenic | 25.0% |
| !! | CATTTTAAATGTGGAAAAGT+GGG | + | chr4.1:87526849-87526868 | None:intergenic | 25.0% |
| !! | GAATGCAAGTTTTTATGTTA+AGG | - | chr4.1:87530482-87530501 | MS.gene054558:intron | 25.0% |
| !! | GACATATACATCATACATTT+TGG | + | chr4.1:87529361-87529380 | None:intergenic | 25.0% |
| !! | GTTTTTATGTTAAGGTTCTT+GGG | - | chr4.1:87530490-87530509 | MS.gene054558:intron | 25.0% |
| !! | TCTAAGACATTTGATATGTT+GGG | + | chr4.1:87526621-87526640 | None:intergenic | 25.0% |
| !! | TGTTATTAATTTTGCAGAAG+TGG | - | chr4.1:87530895-87530914 | MS.gene054558:CDS | 25.0% |
| !!! | AAATTTTGAAATTGGAACGA+GGG | + | chr4.1:87526283-87526302 | None:intergenic | 25.0% |
| !!! | ACCAAGAAAATGGTTTTAAA+CGG | - | chr4.1:87529799-87529818 | MS.gene054558:intron | 25.0% |
| !!! | ACTAGCATATTTTAGTCATT+AGG | - | chr4.1:87528353-87528372 | MS.gene054558:intron | 25.0% |
| !!! | ACTTTTCCACATTTAAAATG+TGG | - | chr4.1:87526849-87526868 | MS.gene054558:intron | 25.0% |
| !!! | ATAATTTTGATGATGGAACT+TGG | - | chr4.1:87527937-87527956 | MS.gene054558:intron | 25.0% |
| !!! | ATTTTTCTTGTATCTGGTTT+TGG | - | chr4.1:87528952-87528971 | MS.gene054558:intron | 25.0% |
| !!! | CTTTTCCACATTTAAAATGT+GGG | - | chr4.1:87526850-87526869 | MS.gene054558:intron | 25.0% |
| !!! | GATTGTGGAAATTTTGAAAT+TGG | + | chr4.1:87526291-87526310 | None:intergenic | 25.0% |
| !!! | TAATTTTGATGATGGAACTT+GGG | - | chr4.1:87527938-87527957 | MS.gene054558:intron | 25.0% |
| !!! | TTCTAAGACATTTGATATGT+TGG | + | chr4.1:87526622-87526641 | None:intergenic | 25.0% |
| !!! | TTGGTTATTCTAGTTACTTT+TGG | + | chr4.1:87526732-87526751 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCAAGAGTTTAG+CGG | - | chr4.1:87526538-87526557 | MS.gene054558:intron | 25.0% |
| !!! | TTTTTCTTGTATCTGGTTTT+GGG | - | chr4.1:87528953-87528972 | MS.gene054558:intron | 25.0% |
| AAAACAATCCTTCAAAACGT+TGG | + | chr4.1:87527001-87527020 | None:intergenic | 30.0% | |
| AACTTGCAACTAATCTAACT+AGG | - | chr4.1:87526917-87526936 | MS.gene054558:intron | 30.0% | |
| AAGAACATAAAGACGATCAT+TGG | + | chr4.1:87529434-87529453 | None:intergenic | 30.0% | |
| AAGTGAACGATAAACAACAA+AGG | + | chr4.1:87528770-87528789 | None:intergenic | 30.0% | |
| AATACAATCCAATTGCAAGT+AGG | - | chr4.1:87530828-87530847 | MS.gene054558:CDS | 30.0% | |
| AATGATCGTCTTTATGTTCT+TGG | - | chr4.1:87529433-87529452 | MS.gene054558:intron | 30.0% | |
| ACATAAAAACTTGCATTCAG+TGG | + | chr4.1:87530480-87530499 | None:intergenic | 30.0% | |
| ACATACTAATTGATCAGAAG+TGG | - | chr4.1:87526571-87526590 | MS.gene054558:intron | 30.0% | |
| ACATGCTGAAATAACTGAAA+TGG | + | chr4.1:87529995-87530014 | None:intergenic | 30.0% | |
| ACATTGCATAATATATGCAG+GGG | - | chr4.1:87526800-87526819 | MS.gene054558:intron | 30.0% | |
| ACTCACATATTGAATTTGCA+TGG | - | chr4.1:87529719-87529738 | MS.gene054558:intron | 30.0% | |
| ACTTCTCTTATAAAGCTCTT+AGG | - | chr4.1:87529859-87529878 | MS.gene054558:intron | 30.0% | |
| AGACATTGCATAATATATGC+AGG | - | chr4.1:87526798-87526817 | MS.gene054558:intron | 30.0% | |
| ATACTAATTGATCAGAAGTG+GGG | - | chr4.1:87526573-87526592 | MS.gene054558:intron | 30.0% | |
| ATCAACTGAGTTGTATTTAC+GGG | - | chr4.1:87526946-87526965 | MS.gene054558:intron | 30.0% | |
| ATGTATTAGAAATCGTGGTT+GGG | - | chr4.1:87527369-87527388 | MS.gene054558:intron | 30.0% | |
| CATACTAATTGATCAGAAGT+GGG | - | chr4.1:87526572-87526591 | MS.gene054558:intron | 30.0% | |
| CATGCTGAAATAACTGAAAT+GGG | + | chr4.1:87529994-87530013 | None:intergenic | 30.0% | |
| CTCACATATTGAATTTGCAT+GGG | - | chr4.1:87529720-87529739 | MS.gene054558:intron | 30.0% | |
| GAAACCTAACTGAAACTAAA+TGG | + | chr4.1:87528658-87528677 | None:intergenic | 30.0% | |
| GACATTGCATAATATATGCA+GGG | - | chr4.1:87526799-87526818 | MS.gene054558:intron | 30.0% | |
| GAGACATGGAATAACATTTA+AGG | - | chr4.1:87528701-87528720 | MS.gene054558:intron | 30.0% | |
| GATTTCAGAACATAGAGAAA+GGG | + | chr4.1:87530116-87530135 | None:intergenic | 30.0% | |
| GCAAATTCAATATGTGAGTT+TGG | + | chr4.1:87529718-87529737 | None:intergenic | 30.0% | |
| GTTTATCAGTAACAAATAGC+AGG | + | chr4.1:87529385-87529404 | None:intergenic | 30.0% | |
| TAACAGAAGCTATTGTTGTA+TGG | - | chr4.1:87527229-87527248 | MS.gene054558:intron | 30.0% | |
| TCACAATTTACACTGTGAAA+AGG | + | chr4.1:87530574-87530593 | None:intergenic | 30.0% | |
| TCATTGTTTATTGTCATGTC+AGG | - | chr4.1:87529624-87529643 | MS.gene054558:intron | 30.0% | |
| TGAAGAACTAGACACTAAAA+AGG | + | chr4.1:87530619-87530638 | None:intergenic | 30.0% | |
| TGATTTCAGAACATAGAGAA+AGG | + | chr4.1:87530117-87530136 | None:intergenic | 30.0% | |
| TGCTCTATCATGATATTCAA+GGG | + | chr4.1:87528409-87528428 | None:intergenic | 30.0% | |
| TGCTTATGAACAACTTATCT+AGG | + | chr4.1:87527296-87527315 | None:intergenic | 30.0% | |
| TTGCATATTGACAGCAAATA+AGG | + | chr4.1:87530717-87530736 | None:intergenic | 30.0% | |
| ! | AAAACCATTTTCTTGGTTTC+AGG | + | chr4.1:87529796-87529815 | None:intergenic | 30.0% |
| ! | AAACAACTCTAGTTGGATTT+TGG | - | chr4.1:87530949-87530968 | MS.gene054558:CDS | 30.0% |
| ! | AAACCATTTTCTTGGTTTCA+GGG | + | chr4.1:87529795-87529814 | None:intergenic | 30.0% |
| ! | AACAATTCCATTGTTATTGC+TGG | - | chr4.1:87529751-87529770 | MS.gene054558:intron | 30.0% |
| ! | CCAAAGTATTCAAGTTAAAC+TGG | + | chr4.1:87529834-87529853 | None:intergenic | 30.0% |
| ! | GTAACTTGTGTCATAACTTA+TGG | - | chr4.1:87530670-87530689 | MS.gene054558:intron | 30.0% |
| ! | TGATCCATTTAGTTTCAGTT+AGG | - | chr4.1:87528651-87528670 | MS.gene054558:intron | 30.0% |
| ! | TTCTTTAGGAACAATGATTG+TGG | + | chr4.1:87526306-87526325 | None:intergenic | 30.0% |
| ! | TTCTTTTAAACACGTCTTAG+TGG | - | chr4.1:87527865-87527884 | MS.gene054558:intron | 30.0% |
| ! | TTTTGACATGCCAAAAGAAA+TGG | - | chr4.1:87527968-87527987 | MS.gene054558:intron | 30.0% |
| !! | AATCTTTTCTTCGTTTTTGC+TGG | - | chr4.1:87526461-87526480 | MS.gene054558:intron | 30.0% |
| !! | ACTCACTTGAACTTTGAAAT+TGG | - | chr4.1:87530016-87530035 | MS.gene054558:intron | 30.0% |
| !! | ATAGCTCTTTATGTTGCTTT+AGG | - | chr4.1:87528303-87528322 | MS.gene054558:intron | 30.0% |
| !! | CCAGTTTAACTTGAATACTT+TGG | - | chr4.1:87529831-87529850 | MS.gene054558:intron | 30.0% |
| !! | CTCACTTGAACTTTGAAATT+GGG | - | chr4.1:87530017-87530036 | MS.gene054558:intron | 30.0% |
| !! | GAATGGAAAAGCATTAGAAA+AGG | - | chr4.1:87529117-87529136 | MS.gene054558:CDS | 30.0% |
| !! | TCAATATGTGAGTTTGGTTT+TGG | + | chr4.1:87529712-87529731 | None:intergenic | 30.0% |
| !! | TCCGTTTAAAACCATTTTCT+TGG | + | chr4.1:87529803-87529822 | None:intergenic | 30.0% |
| !! | TTCACTAGTTTGACTTTTAG+TGG | - | chr4.1:87528675-87528694 | MS.gene054558:intron | 30.0% |
| !!! | AATTTTGATGATGGAACTTG+GGG | - | chr4.1:87527939-87527958 | MS.gene054558:intron | 30.0% |
| !!! | ATATCTCCAACTACCTTTTT+TGG | + | chr4.1:87531032-87531051 | None:intergenic | 30.0% |
| !!! | CACTTGTCTGACTTATTTTT+TGG | - | chr4.1:87528785-87528804 | MS.gene054558:intron | 30.0% |
| !!! | GAAATTTTGAAATTGGAACG+AGG | + | chr4.1:87526284-87526303 | None:intergenic | 30.0% |
| !!! | TTTTTTGTAAAGTAGCCTAG+TGG | + | chr4.1:87526884-87526903 | None:intergenic | 30.0% |
| AAAAGGTAGTTGGAGATATG+TGG | - | chr4.1:87531033-87531052 | MS.gene054558:CDS | 35.0% | |
| AATAACAAACAAATGCCGTG+TGG | + | chr4.1:87528188-87528207 | None:intergenic | 35.0% | |
| ACAGCAAAAGATAGAGAAGT+GGG | - | chr4.1:87528547-87528566 | MS.gene054558:intron | 35.0% | |
| ACTCAATTTCAGATATGCAC+CGG | - | chr4.1:87529000-87529019 | MS.gene054558:intron | 35.0% | |
| AGACACTAAAAAGGACTCAA+GGG | + | chr4.1:87530610-87530629 | None:intergenic | 35.0% | |
| AGTTGCTTCTAACATTGAAG+AGG | - | chr4.1:87527701-87527720 | MS.gene054558:intron | 35.0% | |
| ATATATACATACCTAGGGAC+TGG | + | chr4.1:87528137-87528156 | None:intergenic | 35.0% | |
| CAAACACTTAAGGCTACATT+TGG | + | chr4.1:87527322-87527341 | None:intergenic | 35.0% | |
| CATGTATTAGAAATCGTGGT+TGG | - | chr4.1:87527368-87527387 | MS.gene054558:intron | 35.0% | |
| CTACACTTGAATGACAGTAT+GGG | - | chr4.1:87530437-87530456 | MS.gene054558:intron | 35.0% | |
| CTATCCTGATGTTTACATGT+TGG | - | chr4.1:87529651-87529670 | MS.gene054558:intron | 35.0% | |
| CTGAACAAGTGTTTGTAAGT+GGG | + | chr4.1:87527439-87527458 | None:intergenic | 35.0% | |
| CTGCTCTATCATGATATTCA+AGG | + | chr4.1:87528410-87528429 | None:intergenic | 35.0% | |
| GAAATGGCACATTCACATTT+AGG | - | chr4.1:87527984-87528003 | MS.gene054558:intron | 35.0% | |
| GAATATCATGATAGAGCAGT+TGG | - | chr4.1:87528411-87528430 | MS.gene054558:intron | 35.0% | |
| GAGAGGATATTGAAATTAGC+TGG | - | chr4.1:87527190-87527209 | MS.gene054558:intron | 35.0% | |
| TACTAATTGATCAGAAGTGG+GGG | - | chr4.1:87526574-87526593 | MS.gene054558:intron | 35.0% | |
| TACTCTCTCAAATTACCACA+CGG | - | chr4.1:87528170-87528189 | MS.gene054558:CDS | 35.0% | |
| TAGACACTAAAAAGGACTCA+AGG | + | chr4.1:87530611-87530630 | None:intergenic | 35.0% | |
| TATATAGTCAATGGGCAGTA+TGG | - | chr4.1:87528032-87528051 | MS.gene054558:intron | 35.0% | |
| TCATCCAACATGTAAACATC+AGG | + | chr4.1:87529658-87529677 | None:intergenic | 35.0% | |
| TGAACAAGTGTTTGTAAGTG+GGG | + | chr4.1:87527438-87527457 | None:intergenic | 35.0% | |
| TGAAGAAGCCCATAGAAAAT+CGG | + | chr4.1:87526243-87526262 | None:intergenic | 35.0% | |
| TGACTCTTCACTGTTGAAAA+AGG | - | chr4.1:87528890-87528909 | MS.gene054558:intron | 35.0% | |
| TGATGATCCATCACCAAAAA+AGG | - | chr4.1:87531016-87531035 | MS.gene054558:CDS | 35.0% | |
| TGTTTCTTACAAGCGTAGTT+TGG | - | chr4.1:87527485-87527504 | MS.gene054558:CDS | 35.0% | |
| TTCAAATTGTCGCATGATGT+AGG | - | chr4.1:87528245-87528264 | MS.gene054558:intron | 35.0% | |
| TTGAATGCAATCACATGCAT+TGG | + | chr4.1:87530221-87530240 | None:intergenic | 35.0% | |
| TTGATGAACAGAGATGAGAT+AGG | + | chr4.1:87528459-87528478 | None:intergenic | 35.0% | |
| TTGTTTATTGTCATGTCAGG+TGG | - | chr4.1:87529627-87529646 | MS.gene054558:intron | 35.0% | |
| ! | AATTCCATTGTTATTGCTGG+AGG | - | chr4.1:87529754-87529773 | MS.gene054558:intron | 35.0% |
| ! | ATACACCTGGATTAGAACAT+TGG | - | chr4.1:87529080-87529099 | MS.gene054558:intron | 35.0% |
| ! | ATCTTTTCCCAAACAAGTTG+AGG | + | chr4.1:87526392-87526411 | None:intergenic | 35.0% |
| ! | CCAAAACCACAATTTTCTGA+TGG | + | chr4.1:87528811-87528830 | None:intergenic | 35.0% |
| ! | CCATCAGAAAATTGTGGTTT+TGG | - | chr4.1:87528808-87528827 | MS.gene054558:intron | 35.0% |
| ! | GGAGCATCATACTTTGTTAT+TGG | - | chr4.1:87530849-87530868 | MS.gene054558:CDS | 35.0% |
| ! | GTCTTTAGATGTCATTTGCT+GGG | - | chr4.1:87528838-87528857 | MS.gene054558:intron | 35.0% |
| ! | TGGTCAAGAAGGTGATTTTA+TGG | - | chr4.1:87529456-87529475 | MS.gene054558:intron | 35.0% |
| ! | TGTCTTTAGATGTCATTTGC+TGG | - | chr4.1:87528837-87528856 | MS.gene054558:intron | 35.0% |
| ! | TTTTGGCCATCAGAAAATTG+TGG | - | chr4.1:87528802-87528821 | MS.gene054558:intron | 35.0% |
| !! | AAGGCATTTTCCTACTAAGA+GGG | + | chr4.1:87528751-87528770 | None:intergenic | 35.0% |
| !! | ACTCTAGTTGGATTTTGGAA+TGG | - | chr4.1:87530954-87530973 | MS.gene054558:CDS | 35.0% |
| !! | CTAGTTTGACTTTTAGTGGA+CGG | - | chr4.1:87528679-87528698 | MS.gene054558:intron | 35.0% |
| !! | CTATCTTTTGCTGTGCTATA+GGG | + | chr4.1:87528541-87528560 | None:intergenic | 35.0% |
| !! | CTTTATGTTGCTTTAGGAAG+TGG | - | chr4.1:87528309-87528328 | MS.gene054558:intron | 35.0% |
| !! | GAAAAGCATTAGAAAAGGAG+TGG | - | chr4.1:87529122-87529141 | MS.gene054558:CDS | 35.0% |
| !! | TCTATCTTTTGCTGTGCTAT+AGG | + | chr4.1:87528542-87528561 | None:intergenic | 35.0% |
| !!! | AAAGGCATTTTCCTACTAAG+AGG | + | chr4.1:87528752-87528771 | None:intergenic | 35.0% |
| !!! | ACTCATTGCCGATTTTCTAT+GGG | - | chr4.1:87526232-87526251 | MS.gene054558:CDS | 35.0% |
| !!! | TGTGAATGTGCCATTTCTTT+TGG | + | chr4.1:87527981-87528000 | None:intergenic | 35.0% |
| !!! | TTTTTGAAGCTATTGTCGAG+AGG | - | chr4.1:87527173-87527192 | MS.gene054558:intron | 35.0% |
| !!! | TTTTTTGGTGATGGATCATC+AGG | + | chr4.1:87531017-87531036 | None:intergenic | 35.0% |
| AAAAATAGGTGACCCAGGTT+TGG | + | chr4.1:87529482-87529501 | None:intergenic | 40.0% | |
| AAAACTCGGTTCAGCCAAAT+TGG | - | chr4.1:87526178-87526197 | MS.gene054558:CDS | 40.0% | |
| AAAGAGAATCGACATACACC+TGG | - | chr4.1:87529067-87529086 | MS.gene054558:intron | 40.0% | |
| AAAGTTAGGCTGATCACAGA+AGG | + | chr4.1:87529569-87529588 | None:intergenic | 40.0% | |
| AAATTGGTTGTGATCTGCGT+CGG | - | chr4.1:87526194-87526213 | MS.gene054558:CDS | 40.0% | |
| AACAGACTTGACATATGTGC+AGG | + | chr4.1:87530789-87530808 | None:intergenic | 40.0% | |
| AGACTCCAATGTTCTAATCC+AGG | + | chr4.1:87529088-87529107 | None:intergenic | 40.0% | |
| AGAGGTCGATTGCATGTAAT+GGG | - | chr4.1:87529037-87529056 | MS.gene054558:intron | 40.0% | |
| AGGAAACAATAGCAAGCTCT+GGG | - | chr4.1:87527721-87527740 | MS.gene054558:CDS | 40.0% | |
| AGGCTATCTCTCAACAAATG+TGG | - | chr4.1:87527457-87527476 | MS.gene054558:CDS | 40.0% | |
| ATAGGTTGTTCATCCAGTGT+TGG | - | chr4.1:87530313-87530332 | MS.gene054558:intron | 40.0% | |
| ATGATGCTCCTACTTGCAAT+TGG | + | chr4.1:87530839-87530858 | None:intergenic | 40.0% | |
| CACAGCAAAAGATAGAGAAG+TGG | - | chr4.1:87528546-87528565 | MS.gene054558:intron | 40.0% | |
| CACTTAAAAATAGGTGACCC+AGG | + | chr4.1:87529487-87529506 | None:intergenic | 40.0% | |
| CCAATTGAGTTAAACTCACG+AGG | + | chr4.1:87526775-87526794 | None:intergenic | 40.0% | |
| CCACTTACAAACACTTGTTC+AGG | - | chr4.1:87527437-87527456 | MS.gene054558:CDS | 40.0% | |
| CCATACTGTCATTCAAGTGT+AGG | + | chr4.1:87530439-87530458 | None:intergenic | 40.0% | |
| CCATCACCAAAAAAGGTAGT+TGG | - | chr4.1:87531023-87531042 | MS.gene054558:CDS | 40.0% | |
| CCTACACTTGAATGACAGTA+TGG | - | chr4.1:87530436-87530455 | MS.gene054558:intron | 40.0% | |
| CCTCGTGAGTTTAACTCAAT+TGG | - | chr4.1:87526772-87526791 | MS.gene054558:intron | 40.0% | |
| CCTGAACAAGTGTTTGTAAG+TGG | + | chr4.1:87527440-87527459 | None:intergenic | 40.0% | |
| CTGCGTGAGCACTTAAAAAT+AGG | + | chr4.1:87529496-87529515 | None:intergenic | 40.0% | |
| CTTACAAGCGTAGTTTGGAA+TGG | - | chr4.1:87527490-87527509 | MS.gene054558:CDS | 40.0% | |
| GAAATTGGAACGAGGGAAAT+AGG | + | chr4.1:87526276-87526295 | None:intergenic | 40.0% | |
| GAACAAGTGTTTGTAAGTGG+GGG | + | chr4.1:87527437-87527456 | None:intergenic | 40.0% | |
| GAGTCTATGACAGAGTGAAA+AGG | + | chr4.1:87530518-87530537 | None:intergenic | 40.0% | |
| GATCGTCTTTATGTTCTTGG+TGG | - | chr4.1:87529436-87529455 | MS.gene054558:intron | 40.0% | |
| GCATAATATATGCAGGGGTT+GGG | - | chr4.1:87526805-87526824 | MS.gene054558:intron | 40.0% | |
| GGCACATTCACATTTAGGAA+TGG | - | chr4.1:87527989-87528008 | MS.gene054558:intron | 40.0% | |
| GGCTATCTCTCAACAAATGT+GGG | - | chr4.1:87527458-87527477 | MS.gene054558:CDS | 40.0% | |
| TACTCTCTTAAACACTCGAC+AGG | + | chr4.1:87527267-87527286 | None:intergenic | 40.0% | |
| TATTAAGCAACGAACCTGTG+AGG | + | chr4.1:87529178-87529197 | None:intergenic | 40.0% | |
| TGATCGGAAAGTTACCATAC+CGG | - | chr4.1:87530922-87530941 | MS.gene054558:CDS | 40.0% | |
| TGCATAATATATGCAGGGGT+TGG | - | chr4.1:87526804-87526823 | MS.gene054558:intron | 40.0% | |
| TGTCATTCAAGTGTAGGACT+GGG | + | chr4.1:87530433-87530452 | None:intergenic | 40.0% | |
| TGTCTGTGTCAATGCTTCAT+AGG | - | chr4.1:87530295-87530314 | MS.gene054558:intron | 40.0% | |
| TTGACACCGAAACAAAGCAA+TGG | - | chr4.1:87528093-87528112 | MS.gene054558:CDS | 40.0% | |
| ! | AGGCATTTTCCTACTAAGAG+GGG | + | chr4.1:87528750-87528769 | None:intergenic | 40.0% |
| ! | GAGCTCCCACATTTTAAATG+TGG | + | chr4.1:87526858-87526877 | None:intergenic | 40.0% |
| ! | GTGATTTTATGGCCAAACCT+GGG | - | chr4.1:87529467-87529486 | MS.gene054558:intron | 40.0% |
| ! | TATGTTCTTGGTGGTCAAGA+AGG | - | chr4.1:87529445-87529464 | MS.gene054558:intron | 40.0% |
| ! | TGTCATTTGCTGGGACATTA+TGG | - | chr4.1:87528847-87528866 | MS.gene054558:intron | 40.0% |
| !! | AAGTACAAAGGTATCAGAGG+TGG | + | chr4.1:87528075-87528094 | None:intergenic | 40.0% |
| !! | AGTACAAAGGTATCAGAGGT+GGG | + | chr4.1:87528074-87528093 | None:intergenic | 40.0% |
| !! | ATGAAGCATTGACACAGACA+CGG | + | chr4.1:87530295-87530314 | None:intergenic | 40.0% |
| !! | CAACTAGAGTTGTTTTCACC+CGG | + | chr4.1:87530944-87530963 | None:intergenic | 40.0% |
| !! | GTCAAGTACAAAGGTATCAG+AGG | + | chr4.1:87528078-87528097 | None:intergenic | 40.0% |
| !! | TGTTTCGGTGTCAAGTACAA+AGG | + | chr4.1:87528087-87528106 | None:intergenic | 40.0% |
| !!! | ATATTTTAGGGCCTGTGTTG+TGG | - | chr4.1:87529408-87529427 | MS.gene054558:intron | 40.0% |
| !!! | CACTCATTGCCGATTTTCTA+TGG | - | chr4.1:87526231-87526250 | MS.gene054558:CDS | 40.0% |
| !!! | CCAACTACCTTTTTTGGTGA+TGG | + | chr4.1:87531026-87531045 | None:intergenic | 40.0% |
| !!! | CTATTTTTAAGTGCTCACGC+AGG | - | chr4.1:87529494-87529513 | MS.gene054558:intron | 40.0% |
| !!! | TAGTTGGATTTTGGAATGGC+TGG | - | chr4.1:87530958-87530977 | MS.gene054558:CDS | 40.0% |
| !!! | TGTGAGTTTGGTTTTGGCAT+TGG | + | chr4.1:87529706-87529725 | None:intergenic | 40.0% |
| !!! | TTCTTGTATCTGGTTTTGGG+TGG | - | chr4.1:87528956-87528975 | MS.gene054558:intron | 40.0% |
| ACACATGTCAGTATCCGACA+TGG | - | chr4.1:87530193-87530212 | MS.gene054558:intron | 45.0% | |
| ACCGAAACAAAGCAATGGAG+CGG | - | chr4.1:87528098-87528117 | MS.gene054558:CDS | 45.0% | |
| ACTAAGAGGGGCAGACTAAA+TGG | + | chr4.1:87528738-87528757 | None:intergenic | 45.0% | |
| ACTTCAGGACAGAGAGACAA+GGG | - | chr4.1:87530990-87531009 | MS.gene054558:CDS | 45.0% | |
| ATAGCAGCACCATCAAGTCT+AGG | + | chr4.1:87526431-87526450 | None:intergenic | 45.0% | |
| ATTGACACAGACACGGACAT+CGG | + | chr4.1:87530288-87530307 | None:intergenic | 45.0% | |
| CAGCATCGCAGAAGAAAGTT+AGG | + | chr4.1:87529583-87529602 | None:intergenic | 45.0% | |
| CATTTAGGAATGGCGACAGA+TGG | - | chr4.1:87527999-87528018 | MS.gene054558:intron | 45.0% | |
| CATTTGATATGTTGGGACGC+AGG | + | chr4.1:87526614-87526633 | None:intergenic | 45.0% | |
| CGGGTGAAAACAACTCTAGT+TGG | - | chr4.1:87530942-87530961 | MS.gene054558:CDS | 45.0% | |
| CTGTCATTCAAGTGTAGGAC+TGG | + | chr4.1:87530434-87530453 | None:intergenic | 45.0% | |
| GAACGAGGGAAATAGGAAGA+TGG | + | chr4.1:87526269-87526288 | None:intergenic | 45.0% | |
| GACGCAGATCACAACCAATT+TGG | + | chr4.1:87526195-87526214 | None:intergenic | 45.0% | |
| GAGAGGTCGATTGCATGTAA+TGG | - | chr4.1:87529036-87529055 | MS.gene054558:intron | 45.0% | |
| GAGGAAACAATAGCAAGCTC+TGG | - | chr4.1:87527720-87527739 | MS.gene054558:intron | 45.0% | |
| GATCGGAAAGTTACCATACC+GGG | - | chr4.1:87530923-87530942 | MS.gene054558:CDS | 45.0% | |
| GCACCCTGAAACCAAGAAAA+TGG | - | chr4.1:87529789-87529808 | MS.gene054558:intron | 45.0% | |
| GGGAGATCAAGATTCAGCAT+TGG | + | chr4.1:87528389-87528408 | None:intergenic | 45.0% | |
| TCAAGTCTGTTGTCTGCTGA+AGG | - | chr4.1:87530798-87530817 | MS.gene054558:CDS | 45.0% | |
| TCACCTGTTCCTAGACTTGA+TGG | - | chr4.1:87526419-87526438 | MS.gene054558:intron | 45.0% | |
| TGTGCCTCCAGCAATAACAA+TGG | + | chr4.1:87529761-87529780 | None:intergenic | 45.0% | |
| TGTTGGATGACGAGATGAAG+TGG | - | chr4.1:87529668-87529687 | MS.gene054558:intron | 45.0% | |
| TTGCAGAAGTGGTCTGTGAT+CGG | - | chr4.1:87530906-87530925 | MS.gene054558:CDS | 45.0% | |
| TTTAGTCTGCCCCTCTTAGT+AGG | - | chr4.1:87528738-87528757 | MS.gene054558:intron | 45.0% | |
| ! | ACCTGCTCCTCAACTTGTTT+GGG | - | chr4.1:87526382-87526401 | MS.gene054558:intron | 45.0% |
| ! | GGTGATTTTATGGCCAAACC+TGG | - | chr4.1:87529466-87529485 | MS.gene054558:intron | 45.0% |
| ! | TACCTGCTCCTCAACTTGTT+TGG | - | chr4.1:87526381-87526400 | MS.gene054558:intron | 45.0% |
| ! | TCCACTCACCAACGTTTTGA+AGG | - | chr4.1:87526990-87527009 | MS.gene054558:intron | 45.0% |
| ! | TCCTTCAAAACGTTGGTGAG+TGG | + | chr4.1:87526994-87527013 | None:intergenic | 45.0% |
| ! | TGGAGTCTTGCTGTCAAGAA+TGG | - | chr4.1:87529100-87529119 | MS.gene054558:CDS | 45.0% |
| !! | ACCGCTCCATTGCTTTGTTT+CGG | + | chr4.1:87528102-87528121 | None:intergenic | 45.0% |
| !! | ACCTCACAAGTCGGTTTTGT+GGG | + | chr4.1:87527406-87527425 | None:intergenic | 45.0% |
| !! | ACTTTTAGTGGACGGAGACA+TGG | - | chr4.1:87528687-87528706 | MS.gene054558:intron | 45.0% |
| !! | AGAGTTGTTTTCACCCGGTA+TGG | + | chr4.1:87530939-87530958 | None:intergenic | 45.0% |
| !! | CTCTAGTTCTCTCCCACTTA+TGG | - | chr4.1:87530057-87530076 | MS.gene054558:intron | 45.0% |
| !! | TTTGATGATGGAACTTGGGG+AGG | - | chr4.1:87527942-87527961 | MS.gene054558:intron | 45.0% |
| !! | TTTTAAGTGCTCACGCAGGA+TGG | - | chr4.1:87529498-87529517 | MS.gene054558:intron | 45.0% |
| !!! | GAGTTTGGTTTTGGCATTGG+AGG | + | chr4.1:87529703-87529722 | None:intergenic | 45.0% |
| !! | TTAAAATAAATAAAAACAAA+GGG | + | chr4.1:87530409-87530428 | None:intergenic | 5.0% |
| !!! | TTTAAAATAAATAAAAACAA+AGG | + | chr4.1:87530410-87530429 | None:intergenic | 5.0% |
| ACGATCATTGGCCACAACAC+AGG | + | chr4.1:87529422-87529441 | None:intergenic | 50.0% | |
| AGGTGGGACCTCTACATTGT+GGG | + | chr4.1:87528058-87528077 | None:intergenic | 50.0% | |
| CACTTCAGGACAGAGAGACA+AGG | - | chr4.1:87530989-87531008 | MS.gene054558:CDS | 50.0% | |
| CAGTATGGCCCACAATGTAG+AGG | - | chr4.1:87528047-87528066 | MS.gene054558:intron | 50.0% | |
| CCTGGGAAAATCACCAACAC+TGG | + | chr4.1:87530329-87530348 | None:intergenic | 50.0% | |
| GCACCATCAAGTCTAGGAAC+AGG | + | chr4.1:87526425-87526444 | None:intergenic | 50.0% | |
| GTAGTCCTCACCTCACAAGT+CGG | + | chr4.1:87527415-87527434 | None:intergenic | 50.0% | |
| GTTCGTCCGTCGGTAAAACT+CGG | - | chr4.1:87526164-87526183 | MS.gene054558:CDS | 50.0% | |
| TAGAGCAGTTGGATGTGCAG+AGG | - | chr4.1:87528422-87528441 | MS.gene054558:intron | 50.0% | |
| TTGACACAGACACGGACATC+GGG | + | chr4.1:87530287-87530306 | None:intergenic | 50.0% | |
| ! | ACATACCTAGGGACTGGCAA+AGG | + | chr4.1:87528131-87528150 | None:intergenic | 50.0% |
| ! | ATGCACCGGCAACTCAACTT+TGG | - | chr4.1:87529014-87529033 | MS.gene054558:intron | 50.0% |
| ! | ATGTGGAAAAGTGGGGTGTC+TGG | + | chr4.1:87526841-87526860 | None:intergenic | 50.0% |
| ! | CCTCTCCAAAGTTGAGTTGC+CGG | + | chr4.1:87529022-87529041 | None:intergenic | 50.0% |
| ! | GCTGAACCGAGTTTTACCGA+CGG | + | chr4.1:87526173-87526192 | None:intergenic | 50.0% |
| ! | GGCTGGTTGTACTTCACTTC+AGG | - | chr4.1:87530975-87530994 | MS.gene054558:CDS | 50.0% |
| ! | GGTCGATTGCATGTAATGGG+TGG | - | chr4.1:87529040-87529059 | MS.gene054558:intron | 50.0% |
| ! | TCCCAAACAAGTTGAGGAGC+AGG | + | chr4.1:87526386-87526405 | None:intergenic | 50.0% |
| ! | TGTGGAAAAGTGGGGTGTCT+GGG | + | chr4.1:87526840-87526859 | None:intergenic | 50.0% |
| !! | CAAAACCGACTTGTGAGGTG+AGG | - | chr4.1:87527407-87527426 | MS.gene054558:CDS | 50.0% |
| !! | CACATGCATTGGTGCCATGT+CGG | + | chr4.1:87530210-87530229 | None:intergenic | 50.0% |
| !! | CACCTCACAAGTCGGTTTTG+TGG | + | chr4.1:87527407-87527426 | None:intergenic | 50.0% |
| !! | CCTCACAAGTCGGTTTTGTG+GGG | + | chr4.1:87527405-87527424 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr4.1:87527395-87527414 | None:intergenic | 50.0% |
| !! | GATGTGCAGAGGTGTCTGAA+AGG | - | chr4.1:87528433-87528452 | MS.gene054558:intron | 50.0% |
| !!! | CCAGTGTTGGTGATTTTCCC+AGG | - | chr4.1:87530326-87530345 | MS.gene054558:intron | 50.0% |
| AGTGAGATACCCATTCCCCG+TGG | - | chr4.1:87529148-87529167 | MS.gene054558:CDS | 55.0% | |
| GACATCGGGCACGTTGATAC+CGG | + | chr4.1:87530273-87530292 | None:intergenic | 55.0% | |
| GAGGTGGGACCTCTACATTG+TGG | + | chr4.1:87528059-87528078 | None:intergenic | 55.0% | |
| GATCAGAAGTGGGGGTTTGC+AGG | - | chr4.1:87526582-87526601 | MS.gene054558:intron | 55.0% | |
| GTGATCTGCGTCGGACTTCT+AGG | - | chr4.1:87526203-87526222 | MS.gene054558:CDS | 55.0% | |
| TAAGTGCTCACGCAGGATGG+AGG | - | chr4.1:87529501-87529520 | MS.gene054558:intron | 55.0% | |
| ! | ACCTAGGGACTGGCAAAGGA+GGG | + | chr4.1:87528127-87528146 | None:intergenic | 55.0% |
| ! | ATGTGGGAGCTCTAGCCACT+AGG | - | chr4.1:87526866-87526885 | MS.gene054558:intron | 55.0% |
| ! | CCGGCAACTCAACTTTGGAG+AGG | - | chr4.1:87529019-87529038 | MS.gene054558:intron | 55.0% |
| ! | GTGGAAAAGTGGGGTGTCTG+GGG | + | chr4.1:87526839-87526858 | None:intergenic | 55.0% |
| ! | TACCTAGGGACTGGCAAAGG+AGG | + | chr4.1:87528128-87528147 | None:intergenic | 55.0% |
| ! | TGGAAAAGTGGGGTGTCTGG+GGG | + | chr4.1:87526838-87526857 | None:intergenic | 55.0% |
| !! | CCCCACAAAACCGACTTGTG+AGG | - | chr4.1:87527402-87527421 | MS.gene054558:CDS | 55.0% |
| AACCTGTGAGGTCCTCCACG+GGG | + | chr4.1:87529166-87529185 | None:intergenic | 60.0% | |
| CGAACCTGTGAGGTCCTCCA+CGG | + | chr4.1:87529168-87529187 | None:intergenic | 60.0% | |
| GAACCTGTGAGGTCCTCCAC+GGG | + | chr4.1:87529167-87529186 | None:intergenic | 60.0% | |
| GAGATACCCATTCCCCGTGG+AGG | - | chr4.1:87529151-87529170 | MS.gene054558:CDS | 60.0% | |
| TCCCTCCTTTGCCAGTCCCT+AGG | - | chr4.1:87528123-87528142 | MS.gene054558:CDS | 60.0% | |
| TGAGGTCCTCCACGGGGAAT+GGG | + | chr4.1:87529160-87529179 | None:intergenic | 60.0% | |
| GTGAGGTCCTCCACGGGGAA+TGG | + | chr4.1:87529161-87529180 | None:intergenic | 65.0% | |
| TTCCCCGTGGAGGACCTCAC+AGG | - | chr4.1:87529161-87529180 | MS.gene054558:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 87526161 | 87531082 | 87526161 | ID=MS.gene054558 |
| chr4.1 | mRNA | 87526161 | 87531082 | 87526161 | ID=MS.gene054558.t1;Parent=MS.gene054558 |
| chr4.1 | exon | 87530741 | 87531082 | 87530741 | ID=MS.gene054558.t1.exon1;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87530741 | 87531082 | 87530741 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| chr4.1 | exon | 87529099 | 87529328 | 87529099 | ID=MS.gene054558.t1.exon2;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87529099 | 87529328 | 87529099 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| chr4.1 | exon | 87528061 | 87528231 | 87528061 | ID=MS.gene054558.t1.exon3;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87528061 | 87528231 | 87528061 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| chr4.1 | exon | 87527721 | 87527826 | 87527721 | ID=MS.gene054558.t1.exon4;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87527721 | 87527826 | 87527721 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| chr4.1 | exon | 87527391 | 87527597 | 87527391 | ID=MS.gene054558.t1.exon5;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87527391 | 87527597 | 87527391 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| chr4.1 | exon | 87526161 | 87526331 | 87526161 | ID=MS.gene054558.t1.exon6;Parent=MS.gene054558.t1 |
| chr4.1 | CDS | 87526161 | 87526331 | 87526161 | ID=cds.MS.gene054558.t1;Parent=MS.gene054558.t1 |
| Gene Sequence |
| Protein sequence |
