Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67881.t1 | XP_013463088.1 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 2.80E-157 | 564.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67881.t1 | Q9SA78 | 75.3 | 287 | 71 | 0 | 1 | 287 | 4 | 290 | 2.2e-126 | 453.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67881.t1 | Q5QQ34 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 2.0e-157 | 564.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene67881 | 0.830187 | 3.38E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene67881 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene67881 | 0.818374 | 2.03E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene67881 | 0.867428 | 1.38E-65 | -1.69E-46 |
| MS.gene049887 | MS.gene67881 | 0.864945 | 8.44E-65 | -1.69E-46 |
| MS.gene050084 | MS.gene67881 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene67881 | 0.831451 | 1.66E-55 | -1.69E-46 |
| MS.gene050224 | MS.gene67881 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene050359 | MS.gene67881 | 0.849384 | 3.35E-60 | -1.69E-46 |
| MS.gene050414 | MS.gene67881 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene050551 | MS.gene67881 | 0.833613 | 4.82E-56 | -1.69E-46 |
| MS.gene050646 | MS.gene67881 | 0.846394 | 2.23E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene67881 | 0.833715 | 4.55E-56 | -1.69E-46 |
| MS.gene050752 | MS.gene67881 | 0.845044 | 5.19E-59 | -1.69E-46 |
| MS.gene050838 | MS.gene67881 | 0.926298 | 5.68E-91 | -1.69E-46 |
| MS.gene050945 | MS.gene67881 | 0.851324 | 9.56E-61 | -1.69E-46 |
| MS.gene050955 | MS.gene67881 | 0.810012 | 1.42E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene67881 | 0.88098 | 3.51E-70 | -1.69E-46 |
| MS.gene051043 | MS.gene67881 | 0.824239 | 8.99E-54 | -1.69E-46 |
| MS.gene051102 | MS.gene67881 | 0.831847 | 1.32E-55 | -1.69E-46 |
| MS.gene051233 | MS.gene67881 | 0.850682 | 1.45E-60 | -1.69E-46 |
| MS.gene051234 | MS.gene67881 | 0.910645 | 1.49E-82 | -1.69E-46 |
| MS.gene051343 | MS.gene67881 | 0.881381 | 2.52E-70 | -1.69E-46 |
| MS.gene051381 | MS.gene67881 | 0.857408 | 1.67E-62 | -1.69E-46 |
| MS.gene051382 | MS.gene67881 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene051450 | MS.gene67881 | 0.809243 | 2.08E-50 | -1.69E-46 |
| MS.gene051642 | MS.gene67881 | 0.852952 | 3.29E-61 | -1.69E-46 |
| MS.gene051676 | MS.gene67881 | 0.825298 | 5.06E-54 | -1.69E-46 |
| MS.gene051724 | MS.gene67881 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene67881 | 0.80729 | 5.43E-50 | -1.69E-46 |
| MS.gene051850 | MS.gene67881 | 0.835332 | 1.78E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene67881 | 0.821105 | 4.82E-53 | -1.69E-46 |
| MS.gene051885 | MS.gene67881 | 0.876915 | 9.55E-69 | -1.69E-46 |
| MS.gene051902 | MS.gene67881 | 0.829774 | 4.26E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene67881 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene67881 | 0.811773 | 5.92E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene67881 | 0.862456 | 5.00E-64 | -1.69E-46 |
| MS.gene052133 | MS.gene67881 | 0.833722 | 4.53E-56 | -1.69E-46 |
| MS.gene052242 | MS.gene67881 | -0.838546 | 2.70E-57 | -1.69E-46 |
| MS.gene05224 | MS.gene67881 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene052296 | MS.gene67881 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene67881 | 0.850991 | 1.19E-60 | -1.69E-46 |
| MS.gene052335 | MS.gene67881 | 0.884849 | 1.35E-71 | -1.69E-46 |
| MS.gene052342 | MS.gene67881 | 0.840565 | 8.05E-58 | -1.69E-46 |
| MS.gene052397 | MS.gene67881 | 0.819001 | 1.46E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene67881 | 0.817243 | 3.65E-52 | -1.69E-46 |
| MS.gene052514 | MS.gene67881 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene67881 | 0.816148 | 6.42E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene67881 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene67881 | 0.866564 | 2.60E-65 | -1.69E-46 |
| MS.gene052732 | MS.gene67881 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene67881 | 0.839568 | 1.47E-57 | -1.69E-46 |
| MS.gene053058 | MS.gene67881 | 0.837096 | 6.36E-57 | -1.69E-46 |
| MS.gene053079 | MS.gene67881 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene67881 | 0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene67881 | 0.901809 | 1.84E-78 | -1.69E-46 |
| MS.gene053144 | MS.gene67881 | 0.821175 | 4.64E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene67881 | 0.829082 | 6.28E-55 | -1.69E-46 |
| MS.gene053564 | MS.gene67881 | 0.830871 | 2.30E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene67881 | 0.862661 | 4.33E-64 | -1.69E-46 |
| MS.gene05364 | MS.gene67881 | 0.814819 | 1.27E-51 | -1.69E-46 |
| MS.gene053786 | MS.gene67881 | 0.832837 | 7.53E-56 | -1.69E-46 |
| MS.gene054004 | MS.gene67881 | 0.82388 | 1.09E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene67881 | 0.825138 | 5.52E-54 | -1.69E-46 |
| MS.gene054250 | MS.gene67881 | 0.813568 | 2.40E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene67881 | 0.842711 | 2.19E-58 | -1.69E-46 |
| MS.gene054413 | MS.gene67881 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene054554 | MS.gene67881 | 0.845776 | 3.29E-59 | -1.69E-46 |
| MS.gene054558 | MS.gene67881 | 0.811112 | 8.24E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene67881 | 0.815212 | 1.04E-51 | -1.69E-46 |
| MS.gene054585 | MS.gene67881 | 0.838128 | 3.46E-57 | -1.69E-46 |
| MS.gene054824 | MS.gene67881 | 0.831357 | 1.75E-55 | -1.69E-46 |
| MS.gene055220 | MS.gene67881 | 0.800523 | 1.39E-48 | -1.69E-46 |
| MS.gene055221 | MS.gene67881 | 0.823274 | 1.51E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene67881 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene055424 | MS.gene67881 | 0.830937 | 2.22E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene67881 | 0.824916 | 6.23E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene67881 | 0.824254 | 8.92E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene67881 | 0.857256 | 1.85E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene67881 | 0.851282 | 9.82E-61 | -1.69E-46 |
| MS.gene055580 | MS.gene67881 | -0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene055765 | MS.gene67881 | 0.80907 | 2.27E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene67881 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene055975 | MS.gene67881 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene67881 | -0.829918 | 3.93E-55 | -1.69E-46 |
| MS.gene056075 | MS.gene67881 | 0.818343 | 2.06E-52 | -1.69E-46 |
| MS.gene056097 | MS.gene67881 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene67881 | 0.845491 | 3.93E-59 | -1.69E-46 |
| MS.gene056308 | MS.gene67881 | 0.838032 | 3.66E-57 | -1.69E-46 |
| MS.gene056390 | MS.gene67881 | 0.819854 | 9.33E-53 | -1.69E-46 |
| MS.gene056578 | MS.gene67881 | 0.838784 | 2.34E-57 | -1.69E-46 |
| MS.gene056677 | MS.gene67881 | 0.812321 | 4.50E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene67881 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene67881 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene056881 | MS.gene67881 | 0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene67881 | 0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene67881 | 0.82853 | 8.54E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene67881 | 0.839153 | 1.88E-57 | -1.69E-46 |
| MS.gene057705 | MS.gene67881 | 0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene05781 | MS.gene67881 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene67881 | 0.815482 | 9.04E-52 | -1.69E-46 |
| MS.gene058054 | MS.gene67881 | 0.850229 | 1.94E-60 | -1.69E-46 |
| MS.gene058055 | MS.gene67881 | 0.821425 | 4.06E-53 | -1.69E-46 |
| MS.gene058074 | MS.gene67881 | 0.834454 | 2.97E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene67881 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene058261 | MS.gene67881 | 0.824433 | 8.09E-54 | -1.69E-46 |
| MS.gene058330 | MS.gene67881 | 0.808318 | 3.29E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene67881 | 0.83585 | 1.32E-56 | -1.69E-46 |
| MS.gene058638 | MS.gene67881 | 0.837628 | 4.65E-57 | -1.69E-46 |
| MS.gene058639 | MS.gene67881 | 0.8452 | 4.71E-59 | -1.69E-46 |
| MS.gene058668 | MS.gene67881 | 0.803539 | 3.32E-49 | -1.69E-46 |
| MS.gene05870 | MS.gene67881 | 0.823867 | 1.10E-53 | -1.69E-46 |
| MS.gene058720 | MS.gene67881 | 0.838244 | 3.23E-57 | -1.69E-46 |
| MS.gene058758 | MS.gene67881 | 0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene05880 | MS.gene67881 | 0.840118 | 1.05E-57 | -1.69E-46 |
| MS.gene058852 | MS.gene67881 | 0.844639 | 6.67E-59 | -1.69E-46 |
| MS.gene059007 | MS.gene67881 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene67881 | 0.857296 | 1.80E-62 | -1.69E-46 |
| MS.gene059170 | MS.gene67881 | 0.848602 | 5.52E-60 | -1.69E-46 |
| MS.gene059171 | MS.gene67881 | 0.878248 | 3.27E-69 | -1.69E-46 |
| MS.gene059227 | MS.gene67881 | 0.842473 | 2.53E-58 | -1.69E-46 |
| MS.gene059778 | MS.gene67881 | 0.838111 | 3.49E-57 | -1.69E-46 |
| MS.gene059965 | MS.gene67881 | 0.827501 | 1.51E-54 | -1.69E-46 |
| MS.gene06001 | MS.gene67881 | 0.802534 | 5.36E-49 | -1.69E-46 |
| MS.gene060343 | MS.gene67881 | -0.840744 | 7.23E-58 | -1.69E-46 |
| MS.gene060563 | MS.gene67881 | 0.840748 | 7.21E-58 | -1.69E-46 |
| MS.gene060763 | MS.gene67881 | 0.810774 | 9.75E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene67881 | 0.879006 | 1.77E-69 | -1.69E-46 |
| MS.gene061100 | MS.gene67881 | 0.895062 | 1.37E-75 | -1.69E-46 |
| MS.gene061160 | MS.gene67881 | 0.825908 | 3.63E-54 | -1.69E-46 |
| MS.gene06117 | MS.gene67881 | 0.808876 | 2.50E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21432 | MS.gene67881 | PPI |
| MS.gene67881 | MS.gene23325 | PPI |
| MS.gene67881 | MS.gene50735 | PPI |
| MS.gene67881 | MS.gene68093 | PPI |
| MS.gene67881 | MS.gene005784 | PPI |
| MS.gene67881 | MS.gene003672 | PPI |
| MS.gene003673 | MS.gene67881 | PPI |
| MS.gene032230 | MS.gene67881 | PPI |
| MS.gene67881 | MS.gene062888 | PPI |
| MS.gene00066 | MS.gene67881 | PPI |
| MS.gene55904 | MS.gene67881 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67881.t1 | MTR_2g032130 | 98.616 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67881.t1 | AT2G34840 | 75.347 | 288 | 71 | 0 | 2 | 289 | 6 | 293 | 6.25e-169 | 471 |
| MS.gene67881.t1 | AT1G30630 | 74.740 | 289 | 73 | 0 | 1 | 289 | 4 | 292 | 7.84e-169 | 471 |
| MS.gene67881.t1 | AT2G34840 | 75.701 | 214 | 52 | 0 | 76 | 289 | 1 | 214 | 4.27e-125 | 357 |
Find 64 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGATTTGCCAGTGTTTC+TGG | 0.104502 | 2.4:-57981220 | None:intergenic |
| TGCAAATGCTTGGCTTGATT+TGG | 0.285359 | 2.4:+57979795 | MS.gene67881:CDS |
| TGATGAAGCTGAGACTCTTT+TGG | 0.330291 | 2.4:+57980874 | MS.gene67881:CDS |
| AACCATCTTCTAAATCATTC+AGG | 0.343553 | 2.4:+57981266 | MS.gene67881:CDS |
| AGAAAATTGCATGCTTTATC+CGG | 0.347416 | 2.4:-57983644 | None:intergenic |
| GTAGCATTGTTCCCAATTGC+AGG | 0.373136 | 2.4:-57979278 | None:intergenic |
| GCTACGTTGAGGCTTGTTGC+TGG | 0.380071 | 2.4:+57979296 | MS.gene67881:CDS |
| TGGCTTGCAGATCCTGCAAT+TGG | 0.388117 | 2.4:+57979266 | MS.gene67881:CDS |
| GATATCTCTCAGACAAATCT+TGG | 0.389822 | 2.4:-57980793 | None:intergenic |
| TACCTGAATGATTTAGAAGA+TGG | 0.403328 | 2.4:-57981268 | None:intergenic |
| AGGAGCAGAATCGTTGATTT+CGG | 0.403329 | 2.4:-57979082 | None:intergenic |
| GGAAGATCAAATGCGCCTCT+TGG | 0.403390 | 2.4:-57980772 | None:intergenic |
| GTTGTATGCTGTCTTCATCT+TGG | 0.408937 | 2.4:+57981241 | MS.gene67881:CDS |
| CTCTTGACCAGTACATGATC+TGG | 0.409709 | 2.4:-57982646 | None:intergenic |
| GGCTGTTTGCTGCATGCAAA+TGG | 0.409788 | 2.4:+57980844 | MS.gene67881:CDS |
| ATAGAGAGCGAGCAATTTAA+CGG | 0.433280 | 2.4:-57979118 | None:intergenic |
| TCTACTAGTTTGCTCTTGAA+TGG | 0.434996 | 2.4:+57980818 | MS.gene67881:CDS |
| CGCTGCTGTTGATTGCAGCT+TGG | 0.447662 | 2.4:-57978966 | None:intergenic |
| GTCTCCCATGTTTAACCATC+CGG | 0.458915 | 2.4:+57983625 | MS.gene67881:intron |
| TTACTCAGCTTGCAAATGCT+TGG | 0.460646 | 2.4:+57979785 | MS.gene67881:CDS |
| TGAAATTGTAACCTTTGAAT+CGG | 0.463883 | 2.4:-57979151 | None:intergenic |
| TATGTCGTCGGGAGAGAGGT+TGG | 0.471135 | 2.4:-57978995 | None:intergenic |
| GGCTTGCAGATCCTGCAATT+GGG | 0.471416 | 2.4:+57979267 | MS.gene67881:CDS |
| TATCGTTGCTACATCGCTCT+TGG | 0.471667 | 2.4:+57979039 | MS.gene67881:CDS |
| TGTGATTTGTGCAGGATGCT+AGG | 0.494756 | 2.4:+57981194 | MS.gene67881:intron |
| CTACGTTGAGGCTTGTTGCT+GGG | 0.494907 | 2.4:+57979297 | MS.gene67881:CDS |
| CGGAGGTTGAAGAGGTGATC+TGG | 0.496215 | 2.4:-57978919 | None:intergenic |
| CAGCAAAGGGATATGGCGAT+TGG | 0.513372 | 2.4:-57983694 | None:intergenic |
| CTGGGTGTGAAAGTTTCAGC+TGG | 0.516866 | 2.4:-57982627 | None:intergenic |
| GGGATATGGCGATTGGAAGT+TGG | 0.517033 | 2.4:-57983687 | None:intergenic |
| GTCGCGTTCGATTATGTCGT+CGG | 0.519121 | 2.4:-57979007 | None:intergenic |
| TGCTTGGCTTGATTTGGCTG+TGG | 0.525363 | 2.4:+57979801 | MS.gene67881:CDS |
| AGTTGTTGCGGAGGTTGAAG+AGG | 0.528845 | 2.4:-57978927 | None:intergenic |
| GAAATTGTAACCTTTGAATC+GGG | 0.529238 | 2.4:-57979150 | None:intergenic |
| AATTGCATGCTTTATCCGGA+TGG | 0.529481 | 2.4:-57983640 | None:intergenic |
| TTTCTCATCACCCGATTCAA+AGG | 0.531346 | 2.4:+57979140 | MS.gene67881:CDS |
| TCGCGTTCGATTATGTCGTC+GGG | 0.546258 | 2.4:-57979006 | None:intergenic |
| CTCCGCAACAACTTCTACCT+CGG | 0.548277 | 2.4:+57978937 | MS.gene67881:CDS |
| CGATTATGTCGTCGGGAGAG+AGG | 0.551111 | 2.4:-57978999 | None:intergenic |
| CGATCGCGAGTATTAAAGAA+TGG | 0.554403 | 2.4:+57979246 | MS.gene67881:CDS |
| GTGATTTGTGCAGGATGCTA+GGG | 0.562390 | 2.4:+57981195 | MS.gene67881:intron |
| TAGTTTGCTCTTGAATGGCA+AGG | 0.567959 | 2.4:+57980823 | MS.gene67881:CDS |
| TCTTGACCAGTACATGATCT+GGG | 0.583999 | 2.4:-57982645 | None:intergenic |
| TGCTAGGGATCCAGAAACAC+TGG | 0.586587 | 2.4:+57981210 | MS.gene67881:CDS |
| ATTATGCTGAGAGACAGCTT+AGG | 0.588117 | 2.4:+57979731 | MS.gene67881:CDS |
| CAGATCATGTACTGGTCAAG+AGG | 0.589094 | 2.4:+57982647 | MS.gene67881:CDS |
| AAATCTTTATTAAGATGCAT+AGG | 0.590426 | 2.4:+57979704 | MS.gene67881:CDS |
| TTCACACCCAGATCATGTAC+TGG | 0.591368 | 2.4:+57982639 | MS.gene67881:CDS |
| GCTGTTTGCTGCATGCAAAT+GGG | 0.591850 | 2.4:+57980845 | MS.gene67881:CDS |
| ATGGCGATTGGAAGTTGGTG+TGG | 0.592839 | 2.4:-57983682 | None:intergenic |
| CGAGGTAGAAGTTGTTGCGG+AGG | 0.594425 | 2.4:-57978936 | None:intergenic |
| TACTAATGCTGGTGGAACCA+TGG | 0.596370 | 2.4:+57979364 | MS.gene67881:CDS |
| GCGTTGAAGTATACTAATGC+TGG | 0.597020 | 2.4:+57979353 | MS.gene67881:CDS |
| TTTATCCGGATGGTTAAACA+TGG | 0.600804 | 2.4:-57983630 | None:intergenic |
| CACCGAGGTAGAAGTTGTTG+CGG | 0.603080 | 2.4:-57978939 | None:intergenic |
| GCATGAACAGGATTTCAATG+AGG | 0.619909 | 2.4:+57979331 | MS.gene67881:CDS |
| TTTGGTGGAAGCACTCAACA+AGG | 0.627745 | 2.4:+57980892 | MS.gene67881:CDS |
| TTGAAGTATACTAATGCTGG+TGG | 0.633802 | 2.4:+57979356 | MS.gene67881:CDS |
| AGATCATGTACTGGTCAAGA+GGG | 0.649201 | 2.4:+57982648 | MS.gene67881:CDS |
| TTGGGAACAATGCTACGTTG+AGG | 0.655531 | 2.4:+57979285 | MS.gene67881:CDS |
| TTAACGGCTTGAAGAGACGT+AGG | 0.656056 | 2.4:-57979102 | None:intergenic |
| TTATCCGGATGGTTAAACAT+GGG | 0.679385 | 2.4:-57983629 | None:intergenic |
| TTGCAGCTTGGTATGCACCG+AGG | 0.725254 | 2.4:-57978954 | None:intergenic |
| GGGAGGGGCGAAGATCCAAG+AGG | 0.749423 | 2.4:+57980757 | MS.gene67881:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTATTTTTTTTTTT+AGG | + | chr2.4:57983113-57983132 | MS.gene67881:intron | 0.0% |
| !!! | CTGATAATAATTTTAAAAAT+TGG | + | chr2.4:57979915-57979934 | MS.gene67881:intron | 10.0% |
| !!! | TTTTTTAACTTTTAAATGTA+GGG | + | chr2.4:57980100-57980119 | MS.gene67881:intron | 10.0% |
| !!! | TTTTTTTAACTTTTAAATGT+AGG | + | chr2.4:57980099-57980118 | MS.gene67881:intron | 10.0% |
| !! | AAAAAATTCAATATAGACAT+AGG | + | chr2.4:57980131-57980150 | MS.gene67881:intron | 15.0% |
| !! | AAAAATTCAATATAGACATA+GGG | + | chr2.4:57980132-57980151 | MS.gene67881:intron | 15.0% |
| !! | GATGTATTGAATTTATTAAA+GGG | - | chr2.4:57980464-57980483 | None:intergenic | 15.0% |
| !! | TGATGTATTGAATTTATTAA+AGG | - | chr2.4:57980465-57980484 | None:intergenic | 15.0% |
| !! | TTCATCAAGTAATAATAATA+AGG | - | chr2.4:57980585-57980604 | None:intergenic | 15.0% |
| !!! | AATTAAAAACTTTGGAATAT+AGG | + | chr2.4:57981560-57981579 | MS.gene67881:intron | 15.0% |
| !!! | ATTAAAAACTTTGGAATATA+GGG | + | chr2.4:57981561-57981580 | MS.gene67881:intron | 15.0% |
| !!! | CATTTTTTTAAATACTAGTT+TGG | - | chr2.4:57983506-57983525 | None:intergenic | 15.0% |
| !!! | TATATATGATAATAGAGTTT+TGG | - | chr2.4:57982026-57982045 | None:intergenic | 15.0% |
| !!! | TTATCAAACATTAAAAGTTT+TGG | - | chr2.4:57981020-57981039 | None:intergenic | 15.0% |
| !!! | TTGCTTTTATACAATATAAT+AGG | - | chr2.4:57982958-57982977 | None:intergenic | 15.0% |
| !! | AAATCACAAGATAAAAAAAG+AGG | - | chr2.4:57981324-57981343 | None:intergenic | 20.0% |
| !! | AAATCTTTATTAAGATGCAT+AGG | + | chr2.4:57979704-57979723 | MS.gene67881:CDS | 20.0% |
| !! | AACATCATTTGTAAGAATAA+CGG | + | chr2.4:57981899-57981918 | MS.gene67881:intron | 20.0% |
| !! | AATATCAAACAACTGAAAAT+TGG | - | chr2.4:57981050-57981069 | None:intergenic | 20.0% |
| !! | AATCACAAGATAAAAAAAGA+GGG | - | chr2.4:57981323-57981342 | None:intergenic | 20.0% |
| !! | ATATCTGATTATGTATTTCT+TGG | + | chr2.4:57982384-57982403 | MS.gene67881:intron | 20.0% |
| !! | ATTAAACCTAAAATGTTTCA+TGG | + | chr2.4:57981692-57981711 | MS.gene67881:intron | 20.0% |
| !! | GATATTATTCATGATTTGAA+TGG | + | chr2.4:57982732-57982751 | MS.gene67881:intron | 20.0% |
| !! | GCTTATGAATAATACATAAA+AGG | + | chr2.4:57980290-57980309 | MS.gene67881:intron | 20.0% |
| !! | TGCTATGTAGATTATTATTA+GGG | + | chr2.4:57980014-57980033 | MS.gene67881:intron | 20.0% |
| !! | TTAAAAATATCTCTGTGATT+TGG | + | chr2.4:57979502-57979521 | MS.gene67881:intron | 20.0% |
| !!! | AGTGTAAAACTGTTTTTTTA+CGG | + | chr2.4:57979552-57979571 | MS.gene67881:intron | 20.0% |
| !!! | CAATGCAAAATTTCTATTTT+TGG | + | chr2.4:57980415-57980434 | MS.gene67881:intron | 20.0% |
| !!! | CATCAACATTTTCAATAATA+AGG | - | chr2.4:57979855-57979874 | None:intergenic | 20.0% |
| !!! | CTTTTCCAGTAAAAATATAA+TGG | - | chr2.4:57982926-57982945 | None:intergenic | 20.0% |
| !!! | GCATATCATTAAAATCTTTT+GGG | + | chr2.4:57981601-57981620 | MS.gene67881:intron | 20.0% |
| !!! | TATTGAAAATGTTGATGAAA+GGG | + | chr2.4:57979858-57979877 | MS.gene67881:intron | 20.0% |
| !!! | TCTATAATTTTAATACCTGT+GGG | + | chr2.4:57981455-57981474 | MS.gene67881:intron | 20.0% |
| !!! | TGCAAGTAAATAAGTTTTTA+TGG | + | chr2.4:57980199-57980218 | MS.gene67881:intron | 20.0% |
| !!! | TGCATATCATTAAAATCTTT+TGG | + | chr2.4:57981600-57981619 | MS.gene67881:intron | 20.0% |
| !!! | TGTTTCCATTATATTTTTAC+TGG | + | chr2.4:57982918-57982937 | MS.gene67881:intron | 20.0% |
| !!! | TTAAACTTTTTAGATGATCA+TGG | - | chr2.4:57980374-57980393 | None:intergenic | 20.0% |
| !!! | TTATTGAAAATGTTGATGAA+AGG | + | chr2.4:57979857-57979876 | MS.gene67881:intron | 20.0% |
| !!! | TTTATCGTTATTGTTATTGT+AGG | + | chr2.4:57979217-57979236 | MS.gene67881:intron | 20.0% |
| ! | AAAAATTGGAAGTGATTGAA+TGG | + | chr2.4:57979929-57979948 | MS.gene67881:intron | 25.0% |
| ! | AATGAAGATTGAAATTCTGT+TGG | + | chr2.4:57981076-57981095 | MS.gene67881:intron | 25.0% |
| ! | ACATTTACCCAATTGATTAT+GGG | - | chr2.4:57982812-57982831 | None:intergenic | 25.0% |
| ! | ATCACAAGATAAAAAAAGAG+GGG | - | chr2.4:57981322-57981341 | None:intergenic | 25.0% |
| ! | ATTTACAAGTTACTCACTAA+TGG | - | chr2.4:57982591-57982610 | None:intergenic | 25.0% |
| ! | ATTTACAGCGTAAATTAAAG+AGG | - | chr2.4:57982257-57982276 | None:intergenic | 25.0% |
| ! | GCTCTTTAGTATAAATCTTT+AGG | + | chr2.4:57981098-57981117 | MS.gene67881:intron | 25.0% |
| ! | GCTCTTTCAATTAAAAACTT+TGG | + | chr2.4:57981552-57981571 | MS.gene67881:intron | 25.0% |
| ! | GTGCTATGTAGATTATTATT+AGG | + | chr2.4:57980013-57980032 | MS.gene67881:intron | 25.0% |
| ! | TGAAATTGTAACCTTTGAAT+CGG | - | chr2.4:57979154-57979173 | None:intergenic | 25.0% |
| ! | TGATGTCTAACATTACAAAT+AGG | + | chr2.4:57983524-57983543 | MS.gene67881:intron | 25.0% |
| !! | AAGTTTTTATGGCAATTCAT+AGG | + | chr2.4:57980210-57980229 | MS.gene67881:intron | 25.0% |
| !! | AGGTTTGAAAATAGATGTTT+TGG | + | chr2.4:57980690-57980709 | MS.gene67881:intron | 25.0% |
| !! | ATGAATATCAGCAATTGTTT+TGG | + | chr2.4:57983083-57983102 | MS.gene67881:intron | 25.0% |
| !! | TAAATACTAGTTTGGATGAT+CGG | - | chr2.4:57983498-57983517 | None:intergenic | 25.0% |
| !! | TCATTTTACAGTTTCACTAT+TGG | - | chr2.4:57981998-57982017 | None:intergenic | 25.0% |
| !! | TGAATATCAGCAATTGTTTT+GGG | + | chr2.4:57983084-57983103 | MS.gene67881:intron | 25.0% |
| !!! | AAAATCTTTTGGGTTTAGAA+TGG | + | chr2.4:57981611-57981630 | MS.gene67881:intron | 25.0% |
| !!! | ATGTTGGTTTTGTGTTTTTT+AGG | + | chr2.4:57979665-57979684 | MS.gene67881:intron | 25.0% |
| !!! | ATTATTGGTTTTGTTGGAAA+TGG | + | chr2.4:57981149-57981168 | MS.gene67881:intron | 25.0% |
| !!! | CAAGTATTTTTGATTGCTAA+GGG | - | chr2.4:57982198-57982217 | None:intergenic | 25.0% |
| !!! | CATTAGAAAACTTGTTATCA+GGG | - | chr2.4:57980040-57980059 | None:intergenic | 25.0% |
| !!! | CTCTATAATTTTAATACCTG+TGG | + | chr2.4:57981454-57981473 | MS.gene67881:intron | 25.0% |
| !!! | CTGATATTCATGTTTTTACA+TGG | - | chr2.4:57983074-57983093 | None:intergenic | 25.0% |
| !!! | TCAAGTATTTTTGATTGCTA+AGG | - | chr2.4:57982199-57982218 | None:intergenic | 25.0% |
| !!! | TCATTAGAAAACTTGTTATC+AGG | - | chr2.4:57980041-57980060 | None:intergenic | 25.0% |
| !!! | TTGAAAATAGATGTTTTGGT+TGG | + | chr2.4:57980694-57980713 | MS.gene67881:intron | 25.0% |
| !!! | TTTTTTTTCTTACAGTTCCA+TGG | - | chr2.4:57979384-57979403 | None:intergenic | 25.0% |
| AACCATCTTCTAAATCATTC+AGG | + | chr2.4:57981266-57981285 | MS.gene67881:CDS | 30.0% | |
| AAGATTCAACCAATAAGACA+CGG | - | chr2.4:57982362-57982381 | None:intergenic | 30.0% | |
| AAGTAACAAAAAGATTCCAC+CGG | - | chr2.4:57981406-57981425 | None:intergenic | 30.0% | |
| ACTAGCATTATATACAAACC+AGG | + | chr2.4:57982528-57982547 | MS.gene67881:intron | 30.0% | |
| ACTAGGAAATATTAGAAGCA+GGG | - | chr2.4:57981938-57981957 | None:intergenic | 30.0% | |
| ACTCATCTAAATGAGATAAC+AGG | - | chr2.4:57980985-57981004 | None:intergenic | 30.0% | |
| AGAAAATTGCATGCTTTATC+CGG | - | chr2.4:57983647-57983666 | None:intergenic | 30.0% | |
| AGATATATGTTTAGCCACTT+TGG | + | chr2.4:57982103-57982122 | MS.gene67881:intron | 30.0% | |
| ATAAGGTGTAAAAATTGCAC+GGG | - | chr2.4:57982769-57982788 | None:intergenic | 30.0% | |
| ATAGATGTAGTTTCCTGTAT+TGG | + | chr2.4:57981380-57981399 | MS.gene67881:intron | 30.0% | |
| ATCATTAAACAGAACCAAAG+TGG | - | chr2.4:57982120-57982139 | None:intergenic | 30.0% | |
| CAAAATCACATGCTCATTAT+TGG | - | chr2.4:57983005-57983024 | None:intergenic | 30.0% | |
| CAAACAACTGAAAATTGGAA+AGG | - | chr2.4:57981045-57981064 | None:intergenic | 30.0% | |
| CACATTTACCCAATTGATTA+TGG | - | chr2.4:57982813-57982832 | None:intergenic | 30.0% | |
| CATTCATTCACATTATTAGC+AGG | + | chr2.4:57983257-57983276 | MS.gene67881:intron | 30.0% | |
| CTAATCACATATCTTCTATG+TGG | + | chr2.4:57982326-57982345 | MS.gene67881:intron | 30.0% | |
| GAAATTGTAACCTTTGAATC+GGG | - | chr2.4:57979153-57979172 | None:intergenic | 30.0% | |
| GAGTTTGATAGGGTAATTAT+TGG | + | chr2.4:57981134-57981153 | MS.gene67881:intron | 30.0% | |
| GATAAGGTGTAAAAATTGCA+CGG | - | chr2.4:57982770-57982789 | None:intergenic | 30.0% | |
| GATATGACATATCAGATTGA+TGG | - | chr2.4:57979464-57979483 | None:intergenic | 30.0% | |
| TACCTGAATGATTTAGAAGA+TGG | - | chr2.4:57981271-57981290 | None:intergenic | 30.0% | |
| TACTAGGAAATATTAGAAGC+AGG | - | chr2.4:57981939-57981958 | None:intergenic | 30.0% | |
| TATTATTCATAAGCCTGTCA+AGG | - | chr2.4:57980284-57980303 | None:intergenic | 30.0% | |
| TCACAAGATAAAAAAAGAGG+GGG | - | chr2.4:57981321-57981340 | None:intergenic | 30.0% | |
| TCACTATTGGAATTGTACAA+TGG | - | chr2.4:57981985-57982004 | None:intergenic | 30.0% | |
| TCCTTGAAAAACTTGCAAAA+AGG | + | chr2.4:57983561-57983580 | MS.gene67881:intron | 30.0% | |
| TGCTAAAGTAGAGTTTGATA+GGG | + | chr2.4:57981124-57981143 | MS.gene67881:intron | 30.0% | |
| TTCTGTAGATACTTACTACT+AGG | - | chr2.4:57981955-57981974 | None:intergenic | 30.0% | |
| TTGCTAAAGTAGAGTTTGAT+AGG | + | chr2.4:57981123-57981142 | MS.gene67881:intron | 30.0% | |
| TTGGTTTCCCATAATCAATT+GGG | + | chr2.4:57982802-57982821 | MS.gene67881:intron | 30.0% | |
| ! | AAAATATCTCTGTGATTTGG+TGG | + | chr2.4:57979505-57979524 | MS.gene67881:intron | 30.0% |
| ! | AAATACTAGTTTGGATGATC+GGG | - | chr2.4:57983497-57983516 | None:intergenic | 30.0% |
| ! | AACTGCTATTGTTTTCCATT+TGG | - | chr2.4:57981508-57981527 | None:intergenic | 30.0% |
| ! | ACCTTTTTGCAAGTTTTTCA+AGG | - | chr2.4:57983565-57983584 | None:intergenic | 30.0% |
| ! | ACTGCTATTGTTTTCCATTT+GGG | - | chr2.4:57981507-57981526 | None:intergenic | 30.0% |
| ! | AGTGATCCATGAAACATTTT+AGG | - | chr2.4:57981701-57981720 | None:intergenic | 30.0% |
| ! | ATATAGACATAGGGTTTGTT+TGG | + | chr2.4:57980141-57980160 | MS.gene67881:intron | 30.0% |
| ! | ATTGGTTTCCCATAATCAAT+TGG | + | chr2.4:57982801-57982820 | MS.gene67881:intron | 30.0% |
| ! | GATAAAGCATGCAATTTTCT+CGG | + | chr2.4:57983647-57983666 | MS.gene67881:CDS | 30.0% |
| ! | GATTATCTTTTTGCATGAAC+AGG | + | chr2.4:57979319-57979338 | MS.gene67881:CDS | 30.0% |
| ! | GCAATTTTTACACCTTATCA+TGG | + | chr2.4:57982771-57982790 | MS.gene67881:intron | 30.0% |
| ! | TCAGATTGATGGTTTCTTAT+TGG | - | chr2.4:57979453-57979472 | None:intergenic | 30.0% |
| ! | TGGAATGTGATGTGTTTTAT+TGG | + | chr2.4:57980724-57980743 | MS.gene67881:intron | 30.0% |
| ! | TTTTCATTAACTACCTTGAC+AGG | + | chr2.4:57980268-57980287 | MS.gene67881:intron | 30.0% |
| !! | CATGCTTTTAATTCAAGTGT+CGG | + | chr2.4:57979991-57980010 | MS.gene67881:intron | 30.0% |
| !! | TTGATAATGATGATGAGAAG+AGG | + | chr2.4:57979618-57979637 | MS.gene67881:intron | 30.0% |
| !!! | AAACTGTTTTTTTACGGTGT+CGG | + | chr2.4:57979558-57979577 | MS.gene67881:intron | 30.0% |
| !!! | AGGGTAATTATTGGTTTTGT+TGG | + | chr2.4:57981143-57981162 | MS.gene67881:intron | 30.0% |
| !!! | GTTTTATTGGTGTTGGATTA+GGG | + | chr2.4:57980737-57980756 | MS.gene67881:intron | 30.0% |
| !!! | TGTTTTATTGGTGTTGGATT+AGG | + | chr2.4:57980736-57980755 | MS.gene67881:intron | 30.0% |
| AATTATAGAGATGACAGTCG+AGG | + | chr2.4:57983142-57983161 | MS.gene67881:intron | 35.0% | |
| ACACACAAATGAATCATGTC+TGG | - | chr2.4:57981771-57981790 | None:intergenic | 35.0% | |
| AGAATAACGGTACATAACTC+AGG | + | chr2.4:57981912-57981931 | MS.gene67881:intron | 35.0% | |
| ATAGAGAGCGAGCAATTTAA+CGG | - | chr2.4:57979121-57979140 | None:intergenic | 35.0% | |
| ATTATAGAGATGACAGTCGA+GGG | + | chr2.4:57983143-57983162 | MS.gene67881:intron | 35.0% | |
| CAAGTTAATGTGAATGAGGT+AGG | - | chr2.4:57983348-57983367 | None:intergenic | 35.0% | |
| CAATTGGGTAAATGTGTTAC+AGG | + | chr2.4:57982817-57982836 | MS.gene67881:intron | 35.0% | |
| CACACAAATGAATCATGTCT+GGG | - | chr2.4:57981770-57981789 | None:intergenic | 35.0% | |
| CATATACAAATATGACCCAC+AGG | - | chr2.4:57981473-57981492 | None:intergenic | 35.0% | |
| CATTACAAATAGGTTGTCTC+TGG | + | chr2.4:57983534-57983553 | MS.gene67881:intron | 35.0% | |
| CCAATACAATAGCCATGATA+AGG | - | chr2.4:57982786-57982805 | None:intergenic | 35.0% | |
| CCTTATCATGGCTATTGTAT+TGG | + | chr2.4:57982783-57982802 | MS.gene67881:intron | 35.0% | |
| CTACCTCATTCACATTAACT+TGG | + | chr2.4:57983346-57983365 | MS.gene67881:intron | 35.0% | |
| CTCATTTAGATGAGTGTTTG+TGG | + | chr2.4:57980990-57981009 | MS.gene67881:intron | 35.0% | |
| CTGTGGGTCATATTTGTATA+TGG | + | chr2.4:57981471-57981490 | MS.gene67881:intron | 35.0% | |
| GATATCTCTCAGACAAATCT+TGG | - | chr2.4:57980796-57980815 | None:intergenic | 35.0% | |
| GGAATAAAAAACAAGTGCCT+AGG | - | chr2.4:57980530-57980549 | None:intergenic | 35.0% | |
| GTGGAATACTAGATGATCAT+TGG | + | chr2.4:57979524-57979543 | MS.gene67881:intron | 35.0% | |
| GTTCACACACAAATAACATG+TGG | - | chr2.4:57982432-57982451 | None:intergenic | 35.0% | |
| GTTTCATGGATCACTTATGT+TGG | + | chr2.4:57981706-57981725 | MS.gene67881:intron | 35.0% | |
| TAAATCATTCAGGTAAGCTC+TGG | + | chr2.4:57981276-57981295 | MS.gene67881:intron | 35.0% | |
| TAGCCAAGTTAATGTGAATG+AGG | - | chr2.4:57983352-57983371 | None:intergenic | 35.0% | |
| TTATCCGGATGGTTAAACAT+GGG | - | chr2.4:57983632-57983651 | None:intergenic | 35.0% | |
| TTATTCCTTGACATGTACCT+AGG | + | chr2.4:57980510-57980529 | MS.gene67881:intron | 35.0% | |
| TTCATGATTTGAATGGTGTG+TGG | + | chr2.4:57982739-57982758 | MS.gene67881:intron | 35.0% | |
| TTCTCAGAGAAAGGATATTG+TGG | - | chr2.4:57983322-57983341 | None:intergenic | 35.0% | |
| TTGAAGTATACTAATGCTGG+TGG | + | chr2.4:57979356-57979375 | MS.gene67881:CDS | 35.0% | |
| TTGGAAACCAAATTGCATTG+CGG | + | chr2.4:57981725-57981744 | MS.gene67881:intron | 35.0% | |
| TTTATCCGGATGGTTAAACA+TGG | - | chr2.4:57983633-57983652 | None:intergenic | 35.0% | |
| ! | CTGCTATTGTTTTCCATTTG+GGG | - | chr2.4:57981506-57981525 | None:intergenic | 35.0% |
| ! | GTGTCTTATTGGTTGAATCT+TGG | + | chr2.4:57982361-57982380 | MS.gene67881:intron | 35.0% |
| ! | TAGATGATCATGGTTCTGTT+TGG | - | chr2.4:57980364-57980383 | None:intergenic | 35.0% |
| !! | AGGAAGCATATGATGCATTT+TGG | - | chr2.4:57983591-57983610 | None:intergenic | 35.0% |
| !! | GTGATGTGTTTTATTGGTGT+TGG | + | chr2.4:57980730-57980749 | MS.gene67881:intron | 35.0% |
| !! | TCTACTAGTTTGCTCTTGAA+TGG | + | chr2.4:57980818-57980837 | MS.gene67881:CDS | 35.0% |
| !!! | ATATCAGCAATTGTTTTGGG+TGG | + | chr2.4:57983087-57983106 | MS.gene67881:intron | 35.0% |
| !!! | ATGTTTTGGTTGGTTGAGTT+TGG | + | chr2.4:57980704-57980723 | MS.gene67881:intron | 35.0% |
| !!! | TAGTTTTGTGACCTACTTGA+AGG | - | chr2.4:57981673-57981692 | None:intergenic | 35.0% |
| !!! | TATCAGCAATTGTTTTGGGT+GGG | + | chr2.4:57983088-57983107 | MS.gene67881:intron | 35.0% |
| AAATATGAACCAGACTGTGC+TGG | + | chr2.4:57982153-57982172 | MS.gene67881:intron | 40.0% | |
| AATTGCATGCTTTATCCGGA+TGG | - | chr2.4:57983643-57983662 | None:intergenic | 40.0% | |
| ACAAGATTTGCCAGTGTTTC+TGG | - | chr2.4:57981223-57981242 | None:intergenic | 40.0% | |
| ACCAATAAGACACGGAAGAA+AGG | - | chr2.4:57982354-57982373 | None:intergenic | 40.0% | |
| AGTGTGGGAGAGTTATCAAA+GGG | - | chr2.4:57983453-57983472 | None:intergenic | 40.0% | |
| ATATTGTGGCTTCCTCCTAT+GGG | - | chr2.4:57983308-57983327 | None:intergenic | 40.0% | |
| ATGATGAGAAGAGGATGTGA+GGG | + | chr2.4:57979627-57979646 | MS.gene67881:intron | 40.0% | |
| ATGGAATTTGTCTCCCCAAA+TGG | + | chr2.4:57981490-57981509 | MS.gene67881:intron | 40.0% | |
| ATTATGCTGAGAGACAGCTT+AGG | + | chr2.4:57979731-57979750 | MS.gene67881:CDS | 40.0% | |
| CACATTATTAGCAGGTCACT+CGG | + | chr2.4:57983265-57983284 | MS.gene67881:intron | 40.0% | |
| CGATCGCGAGTATTAAAGAA+TGG | + | chr2.4:57979246-57979265 | MS.gene67881:CDS | 40.0% | |
| GATTGAATGGATCAGCATGT+TGG | + | chr2.4:57979942-57979961 | MS.gene67881:intron | 40.0% | |
| GCATAAACTAAGCATAGTCC+TGG | - | chr2.4:57982549-57982568 | None:intergenic | 40.0% | |
| GCATGAACAGGATTTCAATG+AGG | + | chr2.4:57979331-57979350 | MS.gene67881:CDS | 40.0% | |
| GCGTTGAAGTATACTAATGC+TGG | + | chr2.4:57979353-57979372 | MS.gene67881:CDS | 40.0% | |
| GGAGACTGTTGACGAATTAT+AGG | - | chr2.4:57983611-57983630 | None:intergenic | 40.0% | |
| GGTCTAGCTAACGTATGTTA+AGG | - | chr2.4:57980443-57980462 | None:intergenic | 40.0% | |
| GTTGTATGCTGTCTTCATCT+TGG | + | chr2.4:57981241-57981260 | MS.gene67881:CDS | 40.0% | |
| GTTTGGAAGTGATTGGATGT+TGG | + | chr2.4:57979649-57979668 | MS.gene67881:intron | 40.0% | |
| TCTTGACCAGTACATGATCT+GGG | - | chr2.4:57982648-57982667 | None:intergenic | 40.0% | |
| TTACTCAGCTTGCAAATGCT+TGG | + | chr2.4:57979785-57979804 | MS.gene67881:CDS | 40.0% | |
| TTCAATCTTACCCAACCCAT+AGG | + | chr2.4:57983290-57983309 | MS.gene67881:intron | 40.0% | |
| TTTCTCATCACCCGATTCAA+AGG | + | chr2.4:57979140-57979159 | MS.gene67881:CDS | 40.0% | |
| ! | AAACTCGTTGTGATTTGTGC+AGG | + | chr2.4:57981186-57981205 | MS.gene67881:intron | 40.0% |
| ! | AGATCATGTACTGGTCAAGA+GGG | + | chr2.4:57982648-57982667 | MS.gene67881:CDS | 40.0% |
| ! | ATGTAGTTTCCTGTATTGGC+CGG | + | chr2.4:57981384-57981403 | MS.gene67881:intron | 40.0% |
| ! | GACATAGGGTTTGTTTGGAT+TGG | + | chr2.4:57980146-57980165 | MS.gene67881:intron | 40.0% |
| ! | GATCATGGTTCTGTTTGGAT+TGG | - | chr2.4:57980359-57980378 | None:intergenic | 40.0% |
| ! | GTGTGATTTTCAGCAGCAAA+GGG | - | chr2.4:57983710-57983729 | None:intergenic | 40.0% |
| ! | TGATGAAGCTGAGACTCTTT+TGG | + | chr2.4:57980874-57980893 | MS.gene67881:CDS | 40.0% |
| ! | TGCAAATGCTTGGCTTGATT+TGG | + | chr2.4:57979795-57979814 | MS.gene67881:CDS | 40.0% |
| ! | TGTGTGATTTTCAGCAGCAA+AGG | - | chr2.4:57983711-57983730 | None:intergenic | 40.0% |
| ! | TTTTCAGCAGCAAAGGGATA+TGG | - | chr2.4:57983704-57983723 | None:intergenic | 40.0% |
| !! | AGGAGCAGAATCGTTGATTT+CGG | - | chr2.4:57979085-57979104 | None:intergenic | 40.0% |
| !! | TAGTTTGCTCTTGAATGGCA+AGG | + | chr2.4:57980823-57980842 | MS.gene67881:CDS | 40.0% |
| !! | TATTGGTGTTGGATTAGGGA+GGG | + | chr2.4:57980741-57980760 | MS.gene67881:intron | 40.0% |
| !! | TTATTGGTGTTGGATTAGGG+AGG | + | chr2.4:57980740-57980759 | MS.gene67881:intron | 40.0% |
| AAGTGCCTAGGTACATGTCA+AGG | - | chr2.4:57980518-57980537 | None:intergenic | 45.0% | |
| AATCTTACCCAACCCATAGG+AGG | + | chr2.4:57983293-57983312 | MS.gene67881:intron | 45.0% | |
| AGTTATCAAAGGGGCTTAGC+CGG | - | chr2.4:57983443-57983462 | None:intergenic | 45.0% | |
| CAATCTGTTTCGTGAGCTCA+TGG | + | chr2.4:57982706-57982725 | MS.gene67881:intron | 45.0% | |
| CACTAATATGTGTCGCGACT+CGG | + | chr2.4:57979966-57979985 | MS.gene67881:intron | 45.0% | |
| CTCAGAACCGCAATGCAATT+TGG | - | chr2.4:57981735-57981754 | None:intergenic | 45.0% | |
| CTCTTGACCAGTACATGATC+TGG | - | chr2.4:57982649-57982668 | None:intergenic | 45.0% | |
| GAGTGTGGGAGAGTTATCAA+AGG | - | chr2.4:57983454-57983473 | None:intergenic | 45.0% | |
| GATATTGTGGCTTCCTCCTA+TGG | - | chr2.4:57983309-57983328 | None:intergenic | 45.0% | |
| GATGATGAGAAGAGGATGTG+AGG | + | chr2.4:57979626-57979645 | MS.gene67881:intron | 45.0% | |
| GCAAATGCTAACAAGTGCCT+AGG | - | chr2.4:57980563-57980582 | None:intergenic | 45.0% | |
| GCCTTTCTTCCGTGTCTTAT+TGG | + | chr2.4:57982350-57982369 | MS.gene67881:intron | 45.0% | |
| GGTAGGAGATTCTCAGAGAA+AGG | - | chr2.4:57983331-57983350 | None:intergenic | 45.0% | |
| GTAGCATTGTTCCCAATTGC+AGG | - | chr2.4:57979281-57979300 | None:intergenic | 45.0% | |
| GTCTCCCATGTTTAACCATC+CGG | + | chr2.4:57983625-57983644 | MS.gene67881:intron | 45.0% | |
| GTGTGGGAGAGTTATCAAAG+GGG | - | chr2.4:57983452-57983471 | None:intergenic | 45.0% | |
| TACTAATGCTGGTGGAACCA+TGG | + | chr2.4:57979364-57979383 | MS.gene67881:CDS | 45.0% | |
| TAGAGTTGGGTCCTTCAAGT+AGG | + | chr2.4:57981659-57981678 | MS.gene67881:intron | 45.0% | |
| TATCGTTGCTACATCGCTCT+TGG | + | chr2.4:57979039-57979058 | MS.gene67881:CDS | 45.0% | |
| TGTGAGGGTTTGGAAGTGAT+TGG | + | chr2.4:57979642-57979661 | MS.gene67881:intron | 45.0% | |
| TTAACGGCTTGAAGAGACGT+AGG | - | chr2.4:57979105-57979124 | None:intergenic | 45.0% | |
| TTCACACCCAGATCATGTAC+TGG | + | chr2.4:57982639-57982658 | MS.gene67881:CDS | 45.0% | |
| TTGGGAACAATGCTACGTTG+AGG | + | chr2.4:57979285-57979304 | MS.gene67881:CDS | 45.0% | |
| ! | AAGGACCCAACTCTAGAAGA+GGG | - | chr2.4:57981654-57981673 | None:intergenic | 45.0% |
| ! | CAGATCATGTACTGGTCAAG+AGG | + | chr2.4:57982647-57982666 | MS.gene67881:CDS | 45.0% |
| ! | GCTGTTTGCTGCATGCAAAT+GGG | + | chr2.4:57980845-57980864 | MS.gene67881:CDS | 45.0% |
| ! | GTGATTTGTGCAGGATGCTA+GGG | + | chr2.4:57981195-57981214 | MS.gene67881:intron | 45.0% |
| ! | TGAAGCTGAGACTCTTTTGG+TGG | + | chr2.4:57980877-57980896 | MS.gene67881:CDS | 45.0% |
| ! | TGTGATTTGTGCAGGATGCT+AGG | + | chr2.4:57981194-57981213 | MS.gene67881:intron | 45.0% |
| !! | ATTGGTGTTGGATTAGGGAG+GGG | + | chr2.4:57980742-57980761 | MS.gene67881:intron | 45.0% |
| !! | TTTGGTGGAAGCACTCAACA+AGG | + | chr2.4:57980892-57980911 | MS.gene67881:CDS | 45.0% |
| !!! | CTGTTTTTTTACGGTGTCGG+TGG | + | chr2.4:57979561-57979580 | MS.gene67881:intron | 45.0% |
| !!! | TTTTATATAAAAAGAAAAAA+AGG | + | chr2.4:57980670-57980689 | MS.gene67881:intron | 5.0% |
| AAGATTCCACCGGCCAATAC+AGG | - | chr2.4:57981396-57981415 | None:intergenic | 50.0% | |
| AGTTGTTGCGGAGGTTGAAG+AGG | - | chr2.4:57978930-57978949 | None:intergenic | 50.0% | |
| ATCGGGTGAGCATGAATCTG+CGG | - | chr2.4:57983480-57983499 | None:intergenic | 50.0% | |
| ATTGGCCAACTGCTTGTCAC+AGG | - | chr2.4:57983417-57983436 | None:intergenic | 50.0% | |
| CAAGCAGTTGGCCAATTCTC+CGG | + | chr2.4:57983421-57983440 | MS.gene67881:intron | 50.0% | |
| CACAACCTGTGACAAGCAGT+TGG | + | chr2.4:57983409-57983428 | MS.gene67881:intron | 50.0% | |
| CACCGAGGTAGAAGTTGTTG+CGG | - | chr2.4:57978942-57978961 | None:intergenic | 50.0% | |
| CAGCAAAGGGATATGGCGAT+TGG | - | chr2.4:57983697-57983716 | None:intergenic | 50.0% | |
| CTCCGCAACAACTTCTACCT+CGG | + | chr2.4:57978937-57978956 | MS.gene67881:CDS | 50.0% | |
| CTGGGTGTGAAAGTTTCAGC+TGG | - | chr2.4:57982630-57982649 | None:intergenic | 50.0% | |
| GAGAAGAGGATGTGAGGGTT+TGG | + | chr2.4:57979632-57979651 | MS.gene67881:intron | 50.0% | |
| GGAAGATCAAATGCGCCTCT+TGG | - | chr2.4:57980775-57980794 | None:intergenic | 50.0% | |
| GGCTTGCAGATCCTGCAATT+GGG | + | chr2.4:57979267-57979286 | MS.gene67881:CDS | 50.0% | |
| GGGATATGGCGATTGGAAGT+TGG | - | chr2.4:57983690-57983709 | None:intergenic | 50.0% | |
| GTCGCGTTCGATTATGTCGT+CGG | - | chr2.4:57979010-57979029 | None:intergenic | 50.0% | |
| TCGCGTTCGATTATGTCGTC+GGG | - | chr2.4:57979009-57979028 | None:intergenic | 50.0% | |
| TGAACCAGACTGTGCTGGAA+AGG | + | chr2.4:57982158-57982177 | MS.gene67881:intron | 50.0% | |
| TGCTAGGGATCCAGAAACAC+TGG | + | chr2.4:57981210-57981229 | MS.gene67881:CDS | 50.0% | |
| TGTTCCTTTCCAGCACAGTC+TGG | - | chr2.4:57982165-57982184 | None:intergenic | 50.0% | |
| ! | GAAGGACCCAACTCTAGAAG+AGG | - | chr2.4:57981655-57981674 | None:intergenic | 50.0% |
| ! | GGCTGTTTGCTGCATGCAAA+TGG | + | chr2.4:57980844-57980863 | MS.gene67881:CDS | 50.0% |
| ! | TAGTTTCCTGTATTGGCCGG+TGG | + | chr2.4:57981387-57981406 | MS.gene67881:intron | 50.0% |
| ! | TGGCTTGCAGATCCTGCAAT+TGG | + | chr2.4:57979266-57979285 | MS.gene67881:CDS | 50.0% |
| !! | ATGGCGATTGGAAGTTGGTG+TGG | - | chr2.4:57983685-57983704 | None:intergenic | 50.0% |
| !! | CCACACCCTCTTCTAGAGTT+GGG | + | chr2.4:57981646-57981665 | MS.gene67881:intron | 50.0% |
| !! | CTACGTTGAGGCTTGTTGCT+GGG | + | chr2.4:57979297-57979316 | MS.gene67881:CDS | 50.0% |
| !! | TCCACACCCTCTTCTAGAGT+TGG | + | chr2.4:57981645-57981664 | MS.gene67881:intron | 50.0% |
| !! | TGCTTGGCTTGATTTGGCTG+TGG | + | chr2.4:57979801-57979820 | MS.gene67881:CDS | 50.0% |
| AAGGGGCTTAGCCGGAGAAT+TGG | - | chr2.4:57983435-57983454 | None:intergenic | 55.0% | |
| CGAGGTAGAAGTTGTTGCGG+AGG | - | chr2.4:57978939-57978958 | None:intergenic | 55.0% | |
| CGATTATGTCGTCGGGAGAG+AGG | - | chr2.4:57979002-57979021 | None:intergenic | 55.0% | |
| CGGAGGTTGAAGAGGTGATC+TGG | - | chr2.4:57978922-57978941 | None:intergenic | 55.0% | |
| GTGGCTTCCTCCTATGGGTT+GGG | - | chr2.4:57983303-57983322 | None:intergenic | 55.0% | |
| TATGTCGTCGGGAGAGAGGT+TGG | - | chr2.4:57978998-57979017 | None:intergenic | 55.0% | |
| TGTGGCTTCCTCCTATGGGT+TGG | - | chr2.4:57983304-57983323 | None:intergenic | 55.0% | |
| TTGCAGCTTGGTATGCACCG+AGG | - | chr2.4:57978957-57978976 | None:intergenic | 55.0% | |
| ! | CCCAACTCTAGAAGAGGGTG+TGG | - | chr2.4:57981649-57981668 | None:intergenic | 55.0% |
| ! | CGCTGCTGTTGATTGCAGCT+TGG | - | chr2.4:57978969-57978988 | None:intergenic | 55.0% |
| !! | GCTACGTTGAGGCTTGTTGC+TGG | + | chr2.4:57979296-57979315 | MS.gene67881:CDS | 55.0% |
| ATGAATCTGCGGCGGGAGTG+TGG | - | chr2.4:57983469-57983488 | None:intergenic | 60.0% | |
| GGGTGAGCATGAATCTGCGG+CGG | - | chr2.4:57983477-57983496 | None:intergenic | 60.0% | |
| GGTGAGCATGAATCTGCGGC+GGG | - | chr2.4:57983476-57983495 | None:intergenic | 60.0% | |
| ! | TGAATCTGCGGCGGGAGTGT+GGG | - | chr2.4:57983468-57983487 | None:intergenic | 60.0% |
| GGGAGGGGCGAAGATCCAAG+AGG | + | chr2.4:57980757-57980776 | MS.gene67881:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 57978910 | 57983749 | 57978910 | ID=MS.gene67881 |
| chr2.4 | mRNA | 57978910 | 57983749 | 57978910 | ID=MS.gene67881.t1;Parent=MS.gene67881 |
| chr2.4 | exon | 57978910 | 57979161 | 57978910 | ID=MS.gene67881.t1.exon1;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57978910 | 57979161 | 57978910 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57979239 | 57979390 | 57979239 | ID=MS.gene67881.t1.exon2;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57979239 | 57979390 | 57979239 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57979687 | 57979822 | 57979687 | ID=MS.gene67881.t1.exon3;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57979687 | 57979822 | 57979687 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57980758 | 57980913 | 57980758 | ID=MS.gene67881.t1.exon4;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57980758 | 57980913 | 57980758 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57981208 | 57981287 | 57981208 | ID=MS.gene67881.t1.exon5;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57981208 | 57981287 | 57981208 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57982627 | 57982716 | 57982627 | ID=MS.gene67881.t1.exon6;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57982627 | 57982716 | 57982627 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| chr2.4 | exon | 57983626 | 57983749 | 57983626 | ID=MS.gene67881.t1.exon7;Parent=MS.gene67881.t1 |
| chr2.4 | CDS | 57983626 | 57983749 | 57983626 | ID=cds.MS.gene67881.t1;Parent=MS.gene67881.t1 |
| Gene Sequence |
| Protein sequence |
