AlfalfaGEDB | MS.gene057020

M. sativa cultivar XinJiangDaYe / MS.gene057020

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057020.t1	GAU22022.1	85.9	263	30	3	1	263	1	256	6.30E-99	370.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057020.t1	Q9ZVD2	27.0	237	162	6	1	227	1	236	1.7e-12	74.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057020.t1	A0A2Z6M998	85.9	263	30	3	1	263	1	256	4.5e-99	370.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051940	MS.gene057020	0.955701	1.65E-113	-1.69E-46
MS.gene057020	MS.gene06154	0.805695	1.18E-49	-1.69E-46
MS.gene057020	MS.gene065896	0.829456	5.10E-55	-1.69E-46
MS.gene057020	MS.gene20141	0.807788	4.26E-50	-1.69E-46
MS.gene057020	MS.gene23071	0.809506	1.83E-50	-1.69E-46
MS.gene057020	MS.gene25783	0.801643	8.17E-49	-1.69E-46
MS.gene057020	MS.gene35522	0.805224	1.48E-49	-1.69E-46
MS.gene057020	MS.gene56291	0.84168	4.10E-58	-1.69E-46
MS.gene057020	MS.gene62631	0.820128	8.08E-53	-1.69E-46
MS.gene057020	MS.gene63545	0.844924	5.59E-59	-1.69E-46
MS.gene057020	MS.gene76140	0.922747	6.57E-89	-1.69E-46
MS.gene057020	MS.gene85211	0.936949	7.64E-98	-1.69E-46
MS.gene057020	MS.gene92343	0.807511	4.88E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057020.t1	MTR_2g100060	93.939	264	11	2	1	263	1	260	2.86e-148	415
MS.gene057020.t1	MTR_8g016370	47.104	259	97	6	5	263	7	225	8.46e-71	217
MS.gene057020.t1	MTR_3g104460	42.481	266	133	8	7	262	4	259	3.70e-66	206
MS.gene057020.t1	MTR_5g087760	30.041	243	142	7	1	227	1	231	1.96e-29	112
MS.gene057020.t1	MTR_5g076170	34.343	198	121	4	31	226	47	237	7.51e-24	97.4
MS.gene057020.t1	MTR_2g012550	29.864	221	134	6	18	230	40	247	6.82e-23	94.7
MS.gene057020.t1	MTR_3g078800	28.452	239	149	5	1	227	1	229	1.62e-21	90.9
MS.gene057020.t1	MTR_7g106000	29.386	228	144	9	34	253	7	225	6.68e-21	88.6
MS.gene057020.t1	MTR_3g063310	32.867	143	92	3	86	226	86	226	6.01e-19	84.0
MS.gene057020.t1	MTR_1g077560	30.000	190	130	2	61	249	60	247	5.06e-18	81.3
MS.gene057020.t1	MTR_7g105970	29.187	209	130	9	53	254	29	226	3.51e-16	75.9
MS.gene057020.t1	MTR_7g118270	28.421	190	126	4	69	254	46	229	1.35e-14	71.2
MS.gene057020.t1	MTR_4g119428	29.327	208	120	6	41	227	12	213	3.25e-14	70.9
MS.gene057020.t1	MTR_1g057270	25.824	182	123	6	84	259	72	247	9.39e-14	69.3
MS.gene057020.t1	MTR_3g078820	29.078	141	99	1	87	227	44	183	1.11e-13	68.6
MS.gene057020.t1	MTR_1g057400	26.977	215	138	9	49	253	3	208	2.47e-13	67.4
MS.gene057020.t1	MTR_2g011350	23.429	175	127	2	80	254	35	202	6.82e-13	66.2
MS.gene057020.t1	MTR_3g062470	23.464	179	131	4	62	238	66	240	1.37e-12	66.2
MS.gene057020.t1	MTR_6g071410	25.786	159	113	4	61	215	2	159	1.56e-12	65.5
MS.gene057020.t1	MTR_6g070890	25.786	159	113	4	61	215	2	159	1.56e-12	65.5
MS.gene057020.t1	MTR_7g106010	26.840	231	151	8	34	253	3	226	4.37e-12	64.3
MS.gene057020.t1	MTR_7g116930	26.829	205	129	5	30	229	33	221	5.03e-12	64.3
MS.gene057020.t1	MTR_7g106050	26.857	175	115	5	54	226	14	177	7.04e-12	63.5
MS.gene057020.t1	MTR_7g106030	27.358	212	132	9	54	252	27	229	8.52e-12	63.5
MS.gene057020.t1	MTR_6g471090	27.160	162	99	5	60	215	9	157	1.10e-11	63.2
MS.gene057020.t1	MTR_3g092790	27.338	139	98	3	92	229	49	185	1.51e-11	62.8
MS.gene057020.t1	MTR_3g074150	20.812	197	140	4	37	227	36	222	3.38e-11	62.4
MS.gene057020.t1	MTR_6g070900	26.882	186	116	8	62	235	2	179	3.38e-11	61.6
MS.gene057020.t1	MTR_6g071400	26.882	186	116	8	62	235	2	179	3.38e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene057020.t1	AT1G17620	47.388	268	125	4	3	262	4	263	1.07e-64	203
MS.gene057020.t1	AT5G11890	35.593	295	148	9	1	262	1	286	1.50e-45	154
MS.gene057020.t1	AT2G27080	31.148	244	143	7	1	227	1	236	1.16e-30	115
MS.gene057020.t1	AT2G27080	31.148	244	143	7	1	227	1	236	1.16e-30	115
MS.gene057020.t1	AT1G65690	31.056	161	107	3	68	226	68	226	5.50e-21	89.4
MS.gene057020.t1	AT5G36970	29.327	208	139	5	52	258	48	248	3.20e-19	84.7
MS.gene057020.t1	AT2G35980	25.463	216	159	2	40	253	11	226	1.59e-17	79.3
MS.gene057020.t1	AT5G21130	26.437	174	126	2	54	226	84	256	3.96e-17	79.3
MS.gene057020.t1	AT3G11650	26.263	198	140	5	60	254	45	239	6.59e-17	78.2
MS.gene057020.t1	AT1G54540	28.037	214	149	3	37	249	27	236	5.12e-16	75.5
MS.gene057020.t1	AT5G06320	28.191	188	125	5	70	253	49	230	5.41e-15	72.8
MS.gene057020.t1	AT4G01410	23.737	198	138	5	59	254	41	227	2.51e-13	67.8
MS.gene057020.t1	AT4G01110	26.396	197	121	5	75	261	74	256	6.38e-13	67.4
MS.gene057020.t1	AT5G22870	23.684	190	132	3	68	254	28	207	8.29e-13	66.2
MS.gene057020.t1	AT2G46300	28.662	157	103	4	84	232	77	232	2.02e-11	62.8
MS.gene057020.t1	AT2G27260	25.926	216	149	4	31	244	31	237	3.52e-11	62.0
MS.gene057020.t1	AT5G53730	25.269	186	126	5	72	254	38	213	3.56e-11	61.6

Find 85 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCGAAGTTGACGCCGTTAC+TGG	0.277675	2.1:-4627464	None:intergenic
GCTGCTGCACCTTCTTCTTC+TGG	0.279365	2.1:+4626928	MS.gene057020:CDS
CTTCTCCTCCTCGGCGTAAC+GGG	0.331250	2.1:+4626975	MS.gene057020:CDS
ACGAAGGTGATATGTTTGTT+AGG	0.332211	2.1:-4627131	None:intergenic
TGCTTGACCAGTACTCAAAA+TGG	0.356336	2.1:-4627261	None:intergenic
TTGGTCATGGGTTTGGCGGC+GGG	0.359331	2.1:-4626765	None:intergenic
CGAAGGTGATATGTTTGTTA+GGG	0.379442	2.1:-4627130	None:intergenic
AGCAGCAACGGCGGCGGGTA+CGG	0.382447	2.1:-4626911	None:intergenic
GACACCGTTGCCGTTGGTCA+TGG	0.391670	2.1:-4626778	None:intergenic
GTTGCCGTTGGTCATGGGTT+TGG	0.392896	2.1:-4626772	None:intergenic
TGGAGGAGGAGGTGAGGTTG+AGG	0.394091	2.1:-4627067	None:intergenic
TGAGTTGAGGGTGGAGGAGG+AGG	0.397719	2.1:-4627078	None:intergenic
ACTTCATCAATTAAATTAAA+CGG	0.406615	2.1:-4627531	None:intergenic
GGTGCAGCAGCAACGGCGGC+GGG	0.411032	2.1:-4626916	None:intergenic
GTTGGTCATGGGTTTGGCGG+CGG	0.419990	2.1:-4626766	None:intergenic
TACAAAAGTGAAGGCTAAAG+TGG	0.436063	2.1:+4627361	MS.gene057020:CDS
TTGATGTTAGGTTTAAGATC+TGG	0.438319	2.1:+4627501	MS.gene057020:CDS
CCTTCTCCTCCTCGGCGTAA+CGG	0.438746	2.1:+4626974	MS.gene057020:CDS
TGAGGGTGGAGGAGGAGGTG+AGG	0.440148	2.1:-4627073	None:intergenic
TTAAGTGTGATGTTGATGTT+AGG	0.446188	2.1:+4627489	MS.gene057020:CDS
GGAAAGTTTGAGAGATGTTA+CGG	0.447386	2.1:-4627042	None:intergenic
ACACCGTTGCCGTTGGTCAT+GGG	0.448685	2.1:-4626777	None:intergenic
GGAGGAGGTGAGGTTGAGGT+AGG	0.450411	2.1:-4627063	None:intergenic
GAAGGAGGATGAGAAGTATG+AGG	0.450998	2.1:-4626956	None:intergenic
TTTAGCGTTGAAAGTGAAGT+TGG	0.454211	2.1:+4627337	MS.gene057020:CDS
TGAGGTTGTGGACGGTAGGT+AGG	0.457022	2.1:-4626882	None:intergenic
AACGGCGGCGGGTACGGCGG+TGG	0.458183	2.1:-4626905	None:intergenic
GTACGGCGGTGGTGAGGTTG+TGG	0.465045	2.1:-4626894	None:intergenic
GTAACTCTTATTCCAACGTT+AGG	0.471241	2.1:-4627398	None:intergenic
GGCTGGAAATGATGGGTTTG+CGG	0.475941	2.1:-4626829	None:intergenic
AGGTGCAGCAGCAACGGCGG+CGG	0.477876	2.1:-4626917	None:intergenic
AGAAGAAGGTGCAGCAGCAA+CGG	0.479402	2.1:-4626923	None:intergenic
TTAGGTTTAAGATCTGGAAA+TGG	0.481195	2.1:+4627507	MS.gene057020:CDS
TTCTTGCCATGTGTGAAAGT+TGG	0.485690	2.1:-4627215	None:intergenic
GAGAGAATTGTGATGGTGGT+TGG	0.496275	2.1:-4627161	None:intergenic
CTCATCCTCCTTCTCCTCCT+CGG	0.497763	2.1:+4626966	MS.gene057020:CDS
GCCGTTGGTCATGGGTTTGG+CGG	0.502360	2.1:-4626769	None:intergenic
TTTGAGAGATGTTACGGTGA+AGG	0.503461	2.1:-4627036	None:intergenic
CGCTTCCACGGAGCTGAAGA+AGG	0.509749	2.1:+4627295	MS.gene057020:CDS
CCGTTACGCCGAGGAGGAGA+AGG	0.513542	2.1:-4626974	None:intergenic
ACTGGTTTCTTATTACCGAC+AGG	0.516093	2.1:-4627446	None:intergenic
GTTTGAGAGAATTGTGATGG+TGG	0.523617	2.1:-4627165	None:intergenic
GAGGTTGTGGACGGTAGGTA+GGG	0.523943	2.1:-4626881	None:intergenic
AGCAACGGCGGCGGGTACGG+CGG	0.526300	2.1:-4626908	None:intergenic
CGGCGGGTACGGCGGTGGTG+AGG	0.527713	2.1:-4626900	None:intergenic
GCCATGTGTGAAAGTTGGTA+TGG	0.529809	2.1:-4627210	None:intergenic
GCCACAAAAGCTCAACTCTA+CGG	0.539658	2.1:+4626849	MS.gene057020:CDS
GTGGTGAGGTTGTGGACGGT+AGG	0.539763	2.1:-4626886	None:intergenic
GTTGTTTGAGAGAATTGTGA+TGG	0.543870	2.1:-4627168	None:intergenic
TACGGTGAAGGAAGGACGGT+GGG	0.551852	2.1:-4627024	None:intergenic
TGAAGGAAGGACGGTGGGGA+CGG	0.553633	2.1:-4627019	None:intergenic
AACGGTGTCACCAACGGTAA+CGG	0.557429	2.1:+4626792	MS.gene057020:CDS
AGAGATGTTACGGTGAAGGA+AGG	0.565773	2.1:-4627032	None:intergenic
GTCACCAACGGTAACGGTAA+CGG	0.571662	2.1:+4626798	MS.gene057020:CDS
GTTGGTGACACCGTTGCCGT+TGG	0.575232	2.1:-4626784	None:intergenic
GACGGTGGGGACGGTAGATG+AGG	0.578731	2.1:-4627010	None:intergenic
AACGGCAACGGTGTCACCAA+CGG	0.582278	2.1:+4626786	MS.gene057020:CDS
AGAAGGTGCAGCAGCAACGG+CGG	0.583077	2.1:-4626920	None:intergenic
GAAGTTGGATACAAAAGTGA+AGG	0.584664	2.1:+4627352	MS.gene057020:CDS
ATTAGAATCAGACGCTTCCA+CGG	0.587238	2.1:+4627283	MS.gene057020:CDS
GAATTGTGATGGTGGTTGGT+TGG	0.587560	2.1:-4627157	None:intergenic
GTTAGAGTTCATGTTCCTGT+CGG	0.590463	2.1:+4627431	MS.gene057020:CDS
AAACCCATGACCAACGGCAA+CGG	0.592031	2.1:+4626774	MS.gene057020:CDS
GAGGAAGAACCAGAAGAAGA+AGG	0.593450	2.1:-4626937	None:intergenic
AACAACATCAACATCGGTGA+AGG	0.594037	2.1:+4627185	MS.gene057020:CDS
CATGTCCTTCTTCAGCTCCG+TGG	0.597349	2.1:-4627300	None:intergenic
GCCGCCAAACCCATGACCAA+CGG	0.597855	2.1:+4626768	MS.gene057020:CDS
AAAATGAAAACACCTAACGT+TGG	0.600696	2.1:+4627386	MS.gene057020:CDS
ACAAAAGTGAAGGCTAAAGT+GGG	0.615350	2.1:+4627362	MS.gene057020:CDS
CTCTCAAACAACATCAACAT+CGG	0.615638	2.1:+4627179	MS.gene057020:CDS
GACACCGTTACCGTTACCGT+TGG	0.628131	2.1:-4626802	None:intergenic
GGAATAAGAGTTACATGTGA+CGG	0.629815	2.1:+4627407	MS.gene057020:CDS
TTACGCCGAGGAGGAGAAGG+AGG	0.630487	2.1:-4626971	None:intergenic
GGCGGTGGTGAGGTTGTGGA+CGG	0.633011	2.1:-4626890	None:intergenic
TGGAAATGATGGGTTTGCGG+CGG	0.637844	2.1:-4626826	None:intergenic
TGGACGGTAGGTAGGGCGAG+TGG	0.641233	2.1:-4626874	None:intergenic
ACCATACCAACTTTCACACA+TGG	0.645797	2.1:+4627209	MS.gene057020:CDS
CGGTGCCCGTTACGCCGAGG+AGG	0.646188	2.1:-4626980	None:intergenic
ATGTTACGGTGAAGGAAGGA+CGG	0.655102	2.1:-4627028	None:intergenic
TTACGGTGAAGGAAGGACGG+TGG	0.673058	2.1:-4627025	None:intergenic
CGGTAATAAGAAACCAGTAA+CGG	0.676522	2.1:+4627451	MS.gene057020:CDS
AAGCGGTGCCCGTTACGCCG+AGG	0.677693	2.1:-4626983	None:intergenic
ACGGTAGATGAGGTAGAAAG+CGG	0.681553	2.1:-4627000	None:intergenic
GGTGGTTGGTTGGTAAACGA+AGG	0.694931	2.1:-4627147	None:intergenic
ACGGTGAAGGAAGGACGGTG+GGG	0.703670	2.1:-4627023	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAAATGAAAACACCTAACGT+TGG	+	chr2.1:4627386-4627405	MS.gene057020:CDS	30.0%
	TTAAGTGTGATGTTGATGTT+AGG	+	chr2.1:4627489-4627508	MS.gene057020:CDS	30.0%
!	TTAGGTTTAAGATCTGGAAA+TGG	+	chr2.1:4627507-4627526	MS.gene057020:CDS	30.0%
!	TTGATGTTAGGTTTAAGATC+TGG	+	chr2.1:4627501-4627520	MS.gene057020:CDS	30.0%
!!	AAATCTTCCATTTTGAGTAC+TGG	+	chr2.1:4627254-4627273	MS.gene057020:CDS	30.0%
	AAGGACATGAAGAGCAAAAA+CGG	+	chr2.1:4627314-4627333	MS.gene057020:CDS	35.0%
	ACAAAAGTGAAGGCTAAAGT+GGG	+	chr2.1:4627362-4627381	MS.gene057020:CDS	35.0%
	ACGAAGGTGATATGTTTGTT+AGG	-	chr2.1:4627134-4627153	None:intergenic	35.0%
	CGGTAATAAGAAACCAGTAA+CGG	+	chr2.1:4627451-4627470	MS.gene057020:CDS	35.0%
	CTCTCAAACAACATCAACAT+CGG	+	chr2.1:4627179-4627198	MS.gene057020:CDS	35.0%
	GAAGTTGGATACAAAAGTGA+AGG	+	chr2.1:4627352-4627371	MS.gene057020:CDS	35.0%
	GGAAAGTTTGAGAGATGTTA+CGG	-	chr2.1:4627045-4627064	None:intergenic	35.0%
	GGAATAAGAGTTACATGTGA+CGG	+	chr2.1:4627407-4627426	MS.gene057020:CDS	35.0%
	GTAACTCTTATTCCAACGTT+AGG	-	chr2.1:4627401-4627420	None:intergenic	35.0%
	GTTGTTTGAGAGAATTGTGA+TGG	-	chr2.1:4627171-4627190	None:intergenic	35.0%
	TACAAAAGTGAAGGCTAAAG+TGG	+	chr2.1:4627361-4627380	MS.gene057020:CDS	35.0%
!	CGAAGGTGATATGTTTGTTA+GGG	-	chr2.1:4627133-4627152	None:intergenic	35.0%
!	TTTAGCGTTGAAAGTGAAGT+TGG	+	chr2.1:4627337-4627356	MS.gene057020:CDS	35.0%
!!!	GACGTTGAATTTTGAGTTGA+GGG	-	chr2.1:4627093-4627112	None:intergenic	35.0%
!!!	TGACGTTGAATTTTGAGTTG+AGG	-	chr2.1:4627094-4627113	None:intergenic	35.0%
	AACAACATCAACATCGGTGA+AGG	+	chr2.1:4627185-4627204	MS.gene057020:CDS	40.0%
	ACCATACCAACTTTCACACA+TGG	+	chr2.1:4627209-4627228	MS.gene057020:CDS	40.0%
	ATTAGAATCAGACGCTTCCA+CGG	+	chr2.1:4627283-4627302	MS.gene057020:CDS	40.0%
	GTTAGAGTTCATGTTCCTGT+CGG	+	chr2.1:4627431-4627450	MS.gene057020:CDS	40.0%
	GTTTGAGAGAATTGTGATGG+TGG	-	chr2.1:4627168-4627187	None:intergenic	40.0%
	TGCTTGACCAGTACTCAAAA+TGG	-	chr2.1:4627264-4627283	None:intergenic	40.0%
	TTCTTGCCATGTGTGAAAGT+TGG	-	chr2.1:4627218-4627237	None:intergenic	40.0%
	TTTGAGAGATGTTACGGTGA+AGG	-	chr2.1:4627039-4627058	None:intergenic	40.0%
!	ACTGGTTTCTTATTACCGAC+AGG	-	chr2.1:4627449-4627468	None:intergenic	40.0%
!	CTTTTGTGGCTGGAAATGAT+GGG	-	chr2.1:4626839-4626858	None:intergenic	40.0%
!!!	GTTGAATTTTGAGTTGAGGG+TGG	-	chr2.1:4627090-4627109	None:intergenic	40.0%
	ACGGTAGATGAGGTAGAAAG+CGG	-	chr2.1:4627003-4627022	None:intergenic	45.0%
	AGAGATGTTACGGTGAAGGA+AGG	-	chr2.1:4627035-4627054	None:intergenic	45.0%
	ATGTTACGGTGAAGGAAGGA+CGG	-	chr2.1:4627031-4627050	None:intergenic	45.0%
	GAGGAAGAACCAGAAGAAGA+AGG	-	chr2.1:4626940-4626959	None:intergenic	45.0%
	GCCACAAAAGCTCAACTCTA+CGG	+	chr2.1:4626849-4626868	MS.gene057020:CDS	45.0%
!	ACCGTAGAGTTGAGCTTTTG+TGG	-	chr2.1:4626853-4626872	None:intergenic	45.0%
!	GAAGGAGGATGAGAAGTATG+AGG	-	chr2.1:4626959-4626978	None:intergenic	45.0%
!	GCTTTTGTGGCTGGAAATGA+TGG	-	chr2.1:4626840-4626859	None:intergenic	45.0%
!	TAGAGTTGAGCTTTTGTGGC+TGG	-	chr2.1:4626849-4626868	None:intergenic	45.0%
!!	GAATTGTGATGGTGGTTGGT+TGG	-	chr2.1:4627160-4627179	None:intergenic	45.0%
!!	GAGAGAATTGTGATGGTGGT+TGG	-	chr2.1:4627164-4627183	None:intergenic	45.0%
!!	GCCATGTGTGAAAGTTGGTA+TGG	-	chr2.1:4627213-4627232	None:intergenic	45.0%
!!!	GAATTTTGAGTTGAGGGTGG+AGG	-	chr2.1:4627087-4627106	None:intergenic	45.0%
	AAACCCATGACCAACGGCAA+CGG	+	chr2.1:4626774-4626793	MS.gene057020:CDS	50.0%
	TTCGAAGTTGACGCCGTTAC+TGG	-	chr2.1:4627467-4627486	None:intergenic	50.0%
!	AGAAGAAGGTGCAGCAGCAA+CGG	-	chr2.1:4626926-4626945	None:intergenic	50.0%
!	GTCACCAACGGTAACGGTAA+CGG	+	chr2.1:4626798-4626817	MS.gene057020:CDS	50.0%
!!	AACGGTGTCACCAACGGTAA+CGG	+	chr2.1:4626792-4626811	MS.gene057020:CDS	50.0%
!!	GGCTGGAAATGATGGGTTTG+CGG	-	chr2.1:4626832-4626851	None:intergenic	50.0%
!!	GGTGGTTGGTTGGTAAACGA+AGG	-	chr2.1:4627150-4627169	None:intergenic	50.0%
!!	TGGAAATGATGGGTTTGCGG+CGG	-	chr2.1:4626829-4626848	None:intergenic	50.0%
!!!	TTTTGAGTTGAGGGTGGAGG+AGG	-	chr2.1:4627084-4627103	None:intergenic	50.0%
	ACACCGTTGCCGTTGGTCAT+GGG	-	chr2.1:4626780-4626799	None:intergenic	55.0%
	CATGTCCTTCTTCAGCTCCG+TGG	-	chr2.1:4627303-4627322	None:intergenic	55.0%
	CTCATCCTCCTTCTCCTCCT+CGG	+	chr2.1:4626966-4626985	MS.gene057020:CDS	55.0%
	GACACCGTTACCGTTACCGT+TGG	-	chr2.1:4626805-4626824	None:intergenic	55.0%
	GAGGTTGTGGACGGTAGGTA+GGG	-	chr2.1:4626884-4626903	None:intergenic	55.0%
	GCTGCTGCACCTTCTTCTTC+TGG	+	chr2.1:4626928-4626947	MS.gene057020:CDS	55.0%
	GTTGCCGTTGGTCATGGGTT+TGG	-	chr2.1:4626775-4626794	None:intergenic	55.0%
	TACGGTGAAGGAAGGACGGT+GGG	-	chr2.1:4627027-4627046	None:intergenic	55.0%
	TGAGGTTGTGGACGGTAGGT+AGG	-	chr2.1:4626885-4626904	None:intergenic	55.0%
	TTACGGTGAAGGAAGGACGG+TGG	-	chr2.1:4627028-4627047	None:intergenic	55.0%
!!	AACGGCAACGGTGTCACCAA+CGG	+	chr2.1:4626786-4626805	MS.gene057020:CDS	55.0%
	ACGGTGAAGGAAGGACGGTG+GGG	-	chr2.1:4627026-4627045	None:intergenic	60.0%
	CCTTCTCCTCCTCGGCGTAA+CGG	+	chr2.1:4626974-4626993	MS.gene057020:CDS	60.0%
	CGCTTCCACGGAGCTGAAGA+AGG	+	chr2.1:4627295-4627314	MS.gene057020:CDS	60.0%
	CTTCTCCTCCTCGGCGTAAC+GGG	+	chr2.1:4626975-4626994	MS.gene057020:CDS	60.0%
	GACACCGTTGCCGTTGGTCA+TGG	-	chr2.1:4626781-4626800	None:intergenic	60.0%
	GCCGCCAAACCCATGACCAA+CGG	+	chr2.1:4626768-4626787	MS.gene057020:CDS	60.0%
	GCCGTTGGTCATGGGTTTGG+CGG	-	chr2.1:4626772-4626791	None:intergenic	60.0%
	GGAGGAGGTGAGGTTGAGGT+AGG	-	chr2.1:4627066-4627085	None:intergenic	60.0%
	GTGGTGAGGTTGTGGACGGT+AGG	-	chr2.1:4626889-4626908	None:intergenic	60.0%
	GTTGGTCATGGGTTTGGCGG+CGG	-	chr2.1:4626769-4626788	None:intergenic	60.0%
	TGAAGGAAGGACGGTGGGGA+CGG	-	chr2.1:4627022-4627041	None:intergenic	60.0%
	TGGAGGAGGAGGTGAGGTTG+AGG	-	chr2.1:4627070-4627089	None:intergenic	60.0%
	TTACGCCGAGGAGGAGAAGG+AGG	-	chr2.1:4626974-4626993	None:intergenic	60.0%
	TTGGTCATGGGTTTGGCGGC+GGG	-	chr2.1:4626768-4626787	None:intergenic	60.0%
!	AGAAGGTGCAGCAGCAACGG+CGG	-	chr2.1:4626923-4626942	None:intergenic	60.0%
!	TGAGTTGAGGGTGGAGGAGG+AGG	-	chr2.1:4627081-4627100	None:intergenic	60.0%
!!	GTTGGTGACACCGTTGCCGT+TGG	-	chr2.1:4626787-4626806	None:intergenic	60.0%
	CCGTTACGCCGAGGAGGAGA+AGG	-	chr2.1:4626977-4626996	None:intergenic	65.0%
	GACGGTGGGGACGGTAGATG+AGG	-	chr2.1:4627013-4627032	None:intergenic	65.0%
	GGCGGTGGTGAGGTTGTGGA+CGG	-	chr2.1:4626893-4626912	None:intergenic	65.0%
	GTACGGCGGTGGTGAGGTTG+TGG	-	chr2.1:4626897-4626916	None:intergenic	65.0%
	TGAGGGTGGAGGAGGAGGTG+AGG	-	chr2.1:4627076-4627095	None:intergenic	65.0%
	TGGACGGTAGGTAGGGCGAG+TGG	-	chr2.1:4626877-4626896	None:intergenic	65.0%
	AAGCGGTGCCCGTTACGCCG+AGG	-	chr2.1:4626986-4627005	None:intergenic	70.0%
	AGCAGCAACGGCGGCGGGTA+CGG	-	chr2.1:4626914-4626933	None:intergenic	70.0%
	AGGTGCAGCAGCAACGGCGG+CGG	-	chr2.1:4626920-4626939	None:intergenic	70.0%
	AGCAACGGCGGCGGGTACGG+CGG	-	chr2.1:4626911-4626930	None:intergenic	75.0%
	CGGTGCCCGTTACGCCGAGG+AGG	-	chr2.1:4626983-4627002	None:intergenic	75.0%
	GGTGCAGCAGCAACGGCGGC+GGG	-	chr2.1:4626919-4626938	None:intergenic	75.0%
!	AACGGCGGCGGGTACGGCGG+TGG	-	chr2.1:4626908-4626927	None:intergenic	80.0%
!	CGGCGGGTACGGCGGTGGTG+AGG	-	chr2.1:4626903-4626922	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	4626747	4627538	4626747	ID=MS.gene057020
chr2.1	mRNA	4626747	4627538	4626747	ID=MS.gene057020.t1;Parent=MS.gene057020
chr2.1	exon	4626747	4627538	4626747	ID=MS.gene057020.t1.exon1;Parent=MS.gene057020.t1
chr2.1	CDS	4626747	4627538	4626747	ID=cds.MS.gene057020.t1;Parent=MS.gene057020.t1

Gene Sequence

>MS.gene057020

ATGGCAGATCGTGTATATCCCGCCGCCAAACCCATGACCAACGGCAACGGTGTCACCAACGGTAACGGTAACGGTGTCTCCGCCGCAAACCCATCATTTCCAGCCACAAAAGCTCAACTCTACGGTGCCACTCGCCCTACCTACCGTCCACAACCTCACCACCGCCGTACCCGCCGCCGTTGCTGCTGCACCTTCTTCTTCTGGTTCTTCCTCATACTTCTCATCCTCCTTCTCCTCCTCGGCGTAACGGGCACCGCTTTCTACCTCATCTACCGTCCCCACCGTCCTTCCTTCACCGTAACATCTCTCAAACTTTCCTACCTCAACCTCACCTCCTCCTCCACCCTCAACTCAAAATTCAACGTCAACATCACTGCAAAAAACCCTAACAAACATATCACCTTCGTTTACCAACCAACCACCATCACAATTCTCTCAAACAACATCAACATCGGTGAAGGAACCATACCAACTTTCACACATGGCAAGAAGAACACTACTCTTCTAAAATCTTCCATTTTGAGTACTGGTCAAGCATTAGAATCAGACGCTTCCACGGAGCTGAAGAAGGACATGAAGAGCAAAAACGGTTTAGCGTTGAAAGTGAAGTTGGATACAAAAGTGAAGGCTAAAGTGGGAAAAATGAAAACACCTAACGTTGGAATAAGAGTTACATGTGACGGTGTTAGAGTTCATGTTCCTGTCGGTAATAAGAAACCAGTAACGGCGTCAACTTCGAACGTTAAGTGTGATGTTGATGTTAGGTTTAAGATCTGGAAATGGACCGTTTAA

Protein sequence

>MS.gene057020.t1

MADRVYPAAKPMTNGNGVTNGNGNGVSAANPSFPATKAQLYGATRPTYRPQPHHRRTRRRCCCTFFFWFFLILLILLLLLGVTGTAFYLIYRPHRPSFTVTSLKLSYLNLTSSSTLNSKFNVNITAKNPNKHITFVYQPTTITILSNNINIGEGTIPTFTHGKKNTTLLKSSILSTGQALESDASTELKKDMKSKNGLALKVKLDTKVKAKVGKMKTPNVGIRVTCDGVRVHVPVGNKKPVTASTSNVKCDVDVRFKIWKWTV