AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058332

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058332.t1 MTR_2g032100 99.029 412 4 0 1 412 1 412 0.0 848
MS.gene058332.t1 MTR_8g089180 82.927 410 70 0 1 410 1 410 0.0 719
MS.gene058332.t1 MTR_8g089180 82.927 410 70 0 1 410 1 410 0.0 719
MS.gene058332.t1 MTR_2g032100 98.966 290 3 0 1 290 1 290 0.0 593
MS.gene058332.t1 MTR_5g009170 43.642 346 181 6 73 411 49 387 1.63e-85 266
MS.gene058332.t1 MTR_8g096880 40.870 345 190 8 73 409 8 346 3.86e-82 256
MS.gene058332.t1 MTR_4g134490 40.000 350 186 7 73 409 27 365 4.07e-82 256
MS.gene058332.t1 MTR_8g099535 41.926 353 179 7 73 412 6 345 1.54e-81 254
MS.gene058332.t1 MTR_4g134490 39.155 355 188 7 73 409 27 371 9.91e-81 253
MS.gene058332.t1 MTR_5g009160 40.401 349 186 6 73 410 6 343 8.14e-79 247
MS.gene058332.t1 MTR_8g096880 41.250 320 175 7 73 384 8 322 3.35e-76 239
MS.gene058332.t1 MTR_8g096880 40.830 289 158 7 73 353 8 291 8.75e-65 210
MS.gene058332.t1 MTR_5g009160 39.643 280 148 5 141 410 12 280 3.37e-60 197
MS.gene058332.t1 MTR_5g009160 40.359 223 113 4 141 353 12 224 1.12e-47 162
MS.gene058332.t1 MTR_1g009600 27.119 354 221 13 65 410 1 325 9.40e-28 115
MS.gene058332.t1 MTR_4g102270 27.666 347 211 13 73 401 95 419 6.87e-25 106
MS.gene058332.t1 MTR_4g129820 26.912 353 222 11 65 401 89 421 1.60e-24 105
MS.gene058332.t1 MTR_2g073240 25.833 360 226 13 61 410 11 339 5.53e-24 104
MS.gene058332.t1 MTR_5g011940 26.377 345 218 12 73 401 92 416 1.58e-23 102
MS.gene058332.t1 MTR_0034s0060 25.215 349 222 12 72 410 138 457 2.58e-23 102
MS.gene058332.t1 MTR_4g024600 26.087 345 219 12 73 401 103 427 1.53e-20 93.6
MS.gene058332.t1 MTR_0354s0040 24.638 345 224 12 73 401 84 408 1.31e-18 87.8
MS.gene058332.t1 MTR_3g084090 26.087 345 219 12 73 401 101 425 2.04e-17 84.3
MS.gene058332.t1 MTR_4g063600 23.977 342 210 12 53 384 14 315 4.02e-17 82.4
MS.gene058332.t1 MTR_4g063600 24.058 345 209 12 53 384 14 318 6.98e-17 81.6
MS.gene058332.t1 MTR_4g120030 26.875 320 185 12 73 384 113 391 4.59e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058332.t1 AT1G30620 81.463 410 76 0 1 410 1 410 0.0 716
MS.gene058332.t1 AT1G30620 81.463 410 76 0 1 410 1 410 0.0 716
MS.gene058332.t1 AT1G30620 81.463 410 76 0 1 410 1 410 0.0 716
MS.gene058332.t1 AT1G30620 81.463 410 76 0 1 410 1 410 0.0 716
MS.gene058332.t1 AT1G30620 81.463 410 75 1 1 410 1 409 0.0 713
MS.gene058332.t1 AT4G20460 81.311 412 76 1 1 412 1 411 0.0 706
MS.gene058332.t1 AT5G44480 80.049 411 82 0 1 411 1 411 0.0 656
MS.gene058332.t1 AT5G44480 80.049 411 82 0 1 411 1 411 0.0 656
MS.gene058332.t1 AT5G44480 80.049 411 82 0 1 411 1 411 0.0 656
MS.gene058332.t1 AT5G44480 75.862 435 81 1 1 411 1 435 0.0 644
MS.gene058332.t1 AT1G30620 83.045 289 49 0 1 289 1 289 0.0 507
MS.gene058332.t1 AT2G34850 83.043 230 39 0 183 412 1 230 1.95e-143 408
MS.gene058332.t1 AT2G34850 83.043 230 39 0 183 412 1 230 1.95e-143 408
MS.gene058332.t1 AT2G34850 83.043 230 39 0 183 412 1 230 1.95e-143 408
MS.gene058332.t1 AT2G34850 83.043 230 39 0 183 412 1 230 1.95e-143 408
MS.gene058332.t1 AT1G64440 42.363 347 192 5 70 412 2 344 2.96e-90 276
MS.gene058332.t1 AT4G10960 42.614 352 180 6 72 412 5 345 1.02e-88 273
MS.gene058332.t1 AT4G23920 43.195 338 184 5 73 406 5 338 1.73e-85 265
MS.gene058332.t1 AT1G12780 40.625 352 183 9 72 409 8 347 2.88e-83 259
MS.gene058332.t1 AT1G63180 39.601 351 188 8 72 409 8 347 2.64e-81 254
MS.gene058332.t1 AT1G63180 41.017 295 151 7 72 353 8 292 6.73e-68 218
MS.gene058332.t1 AT1G78570 25.501 349 221 12 72 410 8 327 1.75e-23 103
MS.gene058332.t1 AT3G14790 24.928 349 223 12 72 410 11 330 2.36e-22 100
MS.gene058332.t1 AT3G14790 24.928 349 223 12 72 410 8 327 2.37e-22 100
MS.gene058332.t1 AT1G53500 25.360 347 224 12 72 410 10 329 9.15e-22 98.2
MS.gene058332.t1 AT4G30440 27.195 353 221 12 65 401 82 414 3.22e-21 95.5
MS.gene058332.t1 AT4G00110 26.136 352 224 12 73 408 93 424 9.28e-21 94.0
MS.gene058332.t1 AT2G45310 25.000 348 226 12 69 401 96 423 2.06e-20 93.2
MS.gene058332.t1 AT1G02000 25.797 345 220 12 73 401 94 418 6.98e-20 91.7
MS.gene058332.t1 AT4G12250 26.667 345 217 12 73 401 98 422 2.06e-19 90.1
MS.gene058332.t1 AT3G53520 27.673 318 190 11 73 384 122 405 2.16e-18 87.0
MS.gene058332.t1 AT2G47650 28.037 321 191 12 70 384 120 406 7.04e-18 85.5
MS.gene058332.t1 AT3G62830 27.673 318 190 12 73 384 121 404 4.96e-17 83.2
MS.gene058332.t1 AT3G62830 27.673 318 190 12 73 384 121 404 4.96e-17 83.2
MS.gene058332.t1 AT3G23820 24.419 344 226 10 73 401 114 438 3.73e-16 80.5
MS.gene058332.t1 AT3G53520 27.358 318 189 12 73 384 122 403 5.11e-16 80.1
MS.gene058332.t1 AT2G47650 27.523 327 191 13 70 384 120 412 8.42e-16 79.3
MS.gene058332.t1 AT2G28760 25.538 325 189 14 73 384 33 317 3.80e-15 76.6
MS.gene058332.t1 AT2G28760 25.538 325 189 14 73 384 33 317 3.80e-15 76.6
MS.gene058332.t1 AT2G28760 25.538 325 189 14 73 384 33 317 3.80e-15 76.6
MS.gene058332.t1 AT2G28760 25.538 325 189 14 73 384 64 348 7.06e-15 76.3
MS.gene058332.t1 AT3G46440 24.615 325 192 13 73 384 31 315 7.24e-14 72.8
MS.gene058332.t1 AT3G46440 24.615 325 192 13 73 384 31 315 7.24e-14 72.8
MS.gene058332.t1 AT5G59290 24.308 325 193 13 73 384 3 287 7.65e-14 72.4
MS.gene058332.t1 AT5G59290 24.308 325 193 13 73 384 32 316 7.92e-14 72.8
MS.gene058332.t1 AT5G59290 24.308 325 193 13 73 384 47 331 8.95e-14 72.8
MS.gene058332.t1 AT5G59290 24.308 325 193 13 73 384 25 309 1.00e-13 72.4
MS.gene058332.t1 AT3G53520 25.948 343 187 13 73 384 122 428 1.11e-13 72.8
MS.gene058332.t1 AT3G53520 30.645 186 110 7 73 252 122 294 1.32e-12 68.9

Find 103 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATCTGTCACGTGGAAATT+TGG 0.163966 2.2:+56511933 MS.gene058332:CDS
TGTTCTGTTTCTTCTGTAAT+TGG 0.175667 2.2:-56512602 None:intergenic
ATTAACAGCATTATGCATTT+TGG 0.202310 2.2:+56511436 MS.gene058332:CDS
GATGTCTTCTGCCATCTTCT+TGG 0.228530 2.2:-56512784 None:intergenic
GGCTGCCCTCGGCTGACTTC+TGG 0.230650 2.2:-56511051 None:intergenic
GTTGCTACCTTGCAGGTTAC+AGG 0.262560 2.2:+56513948 MS.gene058332:intron
CTTGTTGGTGTTGGAGTCTA+TGG 0.271525 2.2:+56512511 MS.gene058332:CDS
AGAAGGTTCCCCTTCCTCTT+TGG 0.279115 2.2:-56511389 None:intergenic
GTTTGTGAGTGCTTGTAAAA+AGG 0.301144 2.2:+56514124 MS.gene058332:CDS
GCCTCACCTAATCTCCCTTC+AGG 0.328567 2.2:-56513168 None:intergenic
TCCAGATATTTCAATGTGAT+TGG 0.333892 2.2:+56513138 MS.gene058332:intron
AGATGGCAGTAATGATTCTA+AGG 0.337776 2.2:+56512832 MS.gene058332:CDS
TGTATAAATTGAAGCCTTCC+AGG 0.337951 2.2:-56511991 None:intergenic
CGGTCTTATGCCTGGCTTGA+AGG 0.347715 2.2:+56513251 MS.gene058332:CDS
TAGGAACTTCCATAACCATT+AGG 0.353013 2.2:-56514311 None:intergenic
GGCGCCAAGACCTGAGCTTC+GGG 0.358747 2.2:+56513188 MS.gene058332:CDS
TAGAATCATTACTGCCATCT+TGG 0.369999 2.2:-56512829 None:intergenic
AATCTGTCACGTGGAAATTT+GGG 0.377291 2.2:+56511934 MS.gene058332:CDS
TCAAGTACATGTGCAACATA+TGG 0.383124 2.2:+56512563 MS.gene058332:CDS
AGATCAGACGCGAACTGAAC+TGG 0.384651 2.2:+56514225 MS.gene058332:CDS
GTGGAAATTTGGGTGCCGTC+AGG 0.389040 2.2:+56511944 MS.gene058332:CDS
TACAATGTTGGCACTGGAAA+AGG 0.389995 2.2:+56514086 MS.gene058332:CDS
TGGCAGAAAACTCGCCCTAA+TGG 0.404078 2.2:+56514296 MS.gene058332:CDS
AAAACTCGCCCTAATGGTTA+TGG 0.406101 2.2:+56514302 MS.gene058332:CDS
CATGGGTGACCCCAGGTTCA+TGG 0.408868 2.2:-56511732 None:intergenic
ACAGGCGGTGCAGGCTATAT+CGG 0.410666 2.2:+56511763 MS.gene058332:CDS
GCAGCTCGCGGTCTTATGCC+TGG 0.412061 2.2:+56513243 MS.gene058332:CDS
CGGGAACATGGTCGAATCTC+AGG 0.412089 2.2:+56513207 MS.gene058332:CDS
AGAGGAAGGGGAACCTTCTC+GGG 0.414862 2.2:+56511393 MS.gene058332:CDS
GCATTCAGGTTGCATGGAAA+TGG 0.417518 2.2:+56514276 MS.gene058332:CDS
CAAGTACATGTGCAACATAT+GGG 0.418366 2.2:+56512564 MS.gene058332:CDS
CGTAATCGCCGGGTCGGCGT+GGG 0.421140 2.2:-56514178 None:intergenic
AGGCGCCAAGACCTGAGCTT+CGG 0.423305 2.2:+56513187 MS.gene058332:CDS
TTGTAGATGCCTACTTTAGC+AGG 0.425630 2.2:-56514068 None:intergenic
CTTTGCAGCTGTTGCATATG+TGG 0.425641 2.2:+56512188 MS.gene058332:CDS
AAGAGGAAGGGGAACCTTCT+CGG 0.427697 2.2:+56511392 MS.gene058332:CDS
TGTTCCCGAAGCTCAGGTCT+TGG 0.431938 2.2:-56513192 None:intergenic
ATCAAATACCTTGTTGGTGT+TGG 0.436328 2.2:+56512502 MS.gene058332:CDS
TATTACATCAAATACCTTGT+TGG 0.439822 2.2:+56512496 MS.gene058332:CDS
CTATAGGTTATTACCGGACT+AGG 0.447127 2.2:-56511488 None:intergenic
GCAGCCAGATCTACGTCATT+AGG 0.448269 2.2:+56511068 MS.gene058332:CDS
TGACCTTGAAAAGAGCATTC+AGG 0.450737 2.2:+56514262 MS.gene058332:CDS
AGGAACTTCCATAACCATTA+GGG 0.453384 2.2:-56514310 None:intergenic
CAGAAACCCATCAACCCATA+TGG 0.462557 2.2:+56512756 MS.gene058332:intron
AGTTCGCGTCTGATCTTAGT+CGG 0.469727 2.2:-56514218 None:intergenic
TGGAAAAGGTAGGTCAGTTA+AGG 0.470945 2.2:+56514100 MS.gene058332:CDS
ATACACCTCGGCGTAATCGC+CGG 0.470989 2.2:-56514189 None:intergenic
GCTACGAGTACTTACTTAAG+AGG 0.472497 2.2:-56512228 None:intergenic
TCAGACCCTGAAGGGAGATT+AGG 0.474227 2.2:+56513162 MS.gene058332:CDS
CGACCATGTTCCCGAAGCTC+AGG 0.475626 2.2:-56513198 None:intergenic
TCTCGAATGCATGTTCCGTC+AGG 0.484723 2.2:-56513987 None:intergenic
GCGTAATCGCCGGGTCGGCG+TGG 0.492139 2.2:-56514179 None:intergenic
ACCGCCTAATGACGTAGATC+TGG 0.495255 2.2:-56511072 None:intergenic
TCAATTTATACATGCTGACT+TGG 0.497293 2.2:+56512002 MS.gene058332:CDS
CACCGCCTGTCACTAAAACA+TGG 0.497909 2.2:-56511750 None:intergenic
TGGAAATTTGGGTGCCGTCA+GGG 0.502636 2.2:+56511945 MS.gene058332:CDS
TACACCTCGGCGTAATCGCC+GGG 0.503070 2.2:-56514188 None:intergenic
AATTGAAGCCTTCCAGGCTG+TGG 0.505432 2.2:-56511985 None:intergenic
CCTCACCTAATCTCCCTTCA+GGG 0.505866 2.2:-56513167 None:intergenic
AATCGCCGGGTCGGCGTGGG+AGG 0.507187 2.2:-56514175 None:intergenic
GGCATCTACAATGTTGGCAC+TGG 0.509978 2.2:+56514080 MS.gene058332:CDS
CAAAGCTTATTTCCACAGCC+TGG 0.514442 2.2:+56511973 MS.gene058332:CDS
GCTTATTTCCACAGCCTGGA+AGG 0.517355 2.2:+56511977 MS.gene058332:CDS
CAATTTATACATGCTGACTT+GGG 0.517817 2.2:+56512003 MS.gene058332:CDS
AAAAGAGCATTCAGGTTGCA+TGG 0.521967 2.2:+56514270 MS.gene058332:CDS
AAAGTAGGCATCTACAATGT+TGG 0.534999 2.2:+56514074 MS.gene058332:CDS
CCATGTCAAAGCTCTTGAAA+AGG 0.535022 2.2:+56514040 MS.gene058332:CDS
AGACCTGAGCTTCGGGAACA+TGG 0.536889 2.2:+56513195 MS.gene058332:CDS
GACTTCCTCCCACGCCGACC+CGG 0.539754 2.2:+56514170 MS.gene058332:CDS
TATTGATATACCTTCAAGCC+AGG 0.549755 2.2:-56513261 None:intergenic
AAGGCAAAACCTGCTAAAGT+AGG 0.550752 2.2:+56514059 MS.gene058332:CDS
AGATTCTTTCAGAAGTCGTA+AGG 0.553619 2.2:-56511797 None:intergenic
GGACTAGGAGTGGTAAAAGA+TGG 0.555652 2.2:-56511473 None:intergenic
GACGTAGATCTGGCTGCCCT+CGG 0.560703 2.2:-56511062 None:intergenic
GTTCGCGTCTGATCTTAGTC+GGG 0.560906 2.2:-56514217 None:intergenic
ATGTGGATCCAAAGAGGAAG+GGG 0.563802 2.2:+56511381 MS.gene058332:CDS
AATTACAGAAGAAACAGAAC+AGG 0.565287 2.2:+56512604 MS.gene058332:CDS
TTTGCAGCTGTTGCATATGT+GGG 0.570119 2.2:+56512189 MS.gene058332:CDS
ATATGGAAAAGCCAAGAAGA+TGG 0.574141 2.2:+56512773 MS.gene058332:CDS
TTATGTGGATCCAAAGAGGA+AGG 0.575624 2.2:+56511379 MS.gene058332:CDS
ACCGCCTGTCACTAAAACAT+GGG 0.580269 2.2:-56511749 None:intergenic
ACTAAAACATGGGTGACCCC+AGG 0.588648 2.2:-56511739 None:intergenic
TAGGGCCAGAAGTCAGCCGA+GGG 0.590065 2.2:+56511046 MS.gene058332:CDS
GCGTGCTTTGATGCAGCTCG+CGG 0.606051 2.2:+56513231 MS.gene058332:CDS
CTACGAGTACTTACTTAAGA+GGG 0.612401 2.2:-56512227 None:intergenic
CCTCGGCGTAATCGCCGGGT+CGG 0.614235 2.2:-56514184 None:intergenic
GTGATTGGATCAGACCCTGA+AGG 0.618887 2.2:+56513153 MS.gene058332:CDS
TGATTGGATCAGACCCTGAA+GGG 0.619541 2.2:+56513154 MS.gene058332:CDS
ATCTTATCGAGTTACCATAG+TGG 0.621643 2.2:+56511816 MS.gene058332:CDS
ACAGATTATAACACACCTGA+CGG 0.628409 2.2:+56513972 MS.gene058332:CDS
TATGTGGATCCAAAGAGGAA+GGG 0.629689 2.2:+56511380 MS.gene058332:CDS
GGTTATTACCGGACTAGGAG+TGG 0.633999 2.2:-56511483 None:intergenic
CATAGACTCCAACACCAACA+AGG 0.636337 2.2:-56512510 None:intergenic
CCCTGAAGGGAGATTAGGTG+AGG 0.640331 2.2:+56513167 MS.gene058332:CDS
AAGTACATGTGCAACATATG+GGG 0.646312 2.2:+56512565 MS.gene058332:CDS
TGGATTATGTGGATCCAAAG+AGG 0.648120 2.2:+56511375 MS.gene058332:CDS
CTAGGGCCAGAAGTCAGCCG+AGG 0.650591 2.2:+56511045 MS.gene058332:CDS
TTTCAGGATAATCTGTCACG+TGG 0.666637 2.2:+56511925 MS.gene058332:intron
GCCAGATCTACGTCATTAGG+CGG 0.668959 2.2:+56511071 MS.gene058332:CDS
TAAGCTTTGAAGAACCCTGA+CGG 0.700404 2.2:-56511959 None:intergenic
ATGTTGGCACTGGAAAAGGT+AGG 0.713854 2.2:+56514090 MS.gene058332:CDS
CCGACCCGGCGATTACGCCG+AGG 0.722521 2.2:+56514184 MS.gene058332:CDS
AGTCGGGTCGCTATACACCT+CGG 0.765609 2.2:-56514201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATAAATTGAATAAAA+TGG - chr2.2:56511681-56511700 None:intergenic 10.0%
!!! TTTATTTTTTAGAATCATTT+TGG + chr2.2:56513082-56513101 MS.gene058332:intron 10.0%
!! TAAAATGAAATTGTTTACAT+AGG + chr2.2:56513304-56513323 MS.gene058332:intron 15.0%
!!! AATTATTGATAACTTTTCTT+TGG + chr2.2:56513109-56513128 MS.gene058332:intron 15.0%
!!! ATTATTGATAACTTTTCTTT+GGG + chr2.2:56513110-56513129 MS.gene058332:intron 15.0%
!! AAGTTTAAACACTTGATATT+TGG + chr2.2:56513491-56513510 MS.gene058332:intron 20.0%
!! AATATATCTAACACCTATAA+TGG + chr2.2:56512946-56512965 MS.gene058332:intron 20.0%
!! AATCAAAATTTCTCTATTTC+AGG + chr2.2:56511909-56511928 MS.gene058332:intron 20.0%
!! CTTTAGTCAATATAATCTAT+AGG - chr2.2:56511507-56511526 None:intergenic 20.0%
!! TAAATAAAGTAGAACTGAAA+TGG - chr2.2:56512442-56512461 None:intergenic 20.0%
!! TATAATCTATAGGTTATTAC+CGG - chr2.2:56511497-56511516 None:intergenic 20.0%
!! TATCAAGATTATCATTAGTT+TGG - chr2.2:56513441-56513460 None:intergenic 20.0%
!! TCATAATGATAATTTAGATG+CGG + chr2.2:56511188-56511207 MS.gene058332:intron 20.0%
!!! AATTTTTGTTCTTTTAGGTA+TGG + chr2.2:56511355-56511374 MS.gene058332:intron 20.0%
!!! CTCATAATTTTTGTTCTTTT+AGG + chr2.2:56511350-56511369 MS.gene058332:intron 20.0%
!!! TGATAAAGTTGTATTTCTTT+TGG + chr2.2:56512276-56512295 MS.gene058332:intron 20.0%
!!! TGGAATTTTTTGAAAAATCA+AGG - chr2.2:56512812-56512831 None:intergenic 20.0%
!!! TTTTTCAAAAAATTCCAAGA+TGG + chr2.2:56512815-56512834 MS.gene058332:CDS 20.0%
! AAAACAGCTTATAGCATATA+TGG - chr2.2:56513690-56513709 None:intergenic 25.0%
! AAACTTATTCACATGTCAAT+AGG - chr2.2:56511608-56511627 None:intergenic 25.0%
! AAAGAACTACAAAAAACATG+GGG - chr2.2:56512888-56512907 None:intergenic 25.0%
! AATCATTGACATTATGTACT+TGG + chr2.2:56512729-56512748 MS.gene058332:intron 25.0%
! ACTTATTTGAGCTTATCTAT+TGG - chr2.2:56513794-56513813 None:intergenic 25.0%
! AGAAATACAACTTTATCAAC+TGG - chr2.2:56512274-56512293 None:intergenic 25.0%
! AGACAAATTGAAAAAGCTTA+TGG - chr2.2:56513757-56513776 None:intergenic 25.0%
! ATACAAGAATTGAAGTAACT+TGG - chr2.2:56513876-56513895 None:intergenic 25.0%
! ATTCAGAATCATTAAACGAA+GGG - chr2.2:56512929-56512948 None:intergenic 25.0%
! CCTTGTTACAGAAAATAATT+TGG + chr2.2:56512043-56512062 MS.gene058332:intron 25.0%
! GAAAGAACTACAAAAAACAT+GGG - chr2.2:56512889-56512908 None:intergenic 25.0%
! TACAAGAATTGAAGTAACTT+GGG - chr2.2:56513875-56513894 None:intergenic 25.0%
! TATTACATCAAATACCTTGT+TGG + chr2.2:56512496-56512515 MS.gene058332:CDS 25.0%
! TATTCAGAATCATTAAACGA+AGG - chr2.2:56512930-56512949 None:intergenic 25.0%
! TGAAAGAACTACAAAAAACA+TGG - chr2.2:56512890-56512909 None:intergenic 25.0%
!! AGTCAAGAAAACAAATTTTC+TGG - chr2.2:56512115-56512134 None:intergenic 25.0%
!! ATTAACAGCATTATGCATTT+TGG + chr2.2:56511436-56511455 MS.gene058332:CDS 25.0%
!! CCAAATTATTTTCTGTAACA+AGG - chr2.2:56512046-56512065 None:intergenic 25.0%
!! GATTTATATCTATTTCTTCC+AGG - chr2.2:56511586-56511605 None:intergenic 25.0%
!! GTCAAGAAAACAAATTTTCT+GGG - chr2.2:56512114-56512133 None:intergenic 25.0%
!! TCAAGAAAACAAATTTTCTG+GGG - chr2.2:56512113-56512132 None:intergenic 25.0%
!!! AGAAAATTTGTTTTCTTGAC+TGG + chr2.2:56512114-56512133 MS.gene058332:intron 25.0%
!!! ATTTTAAAGACATACCACTA+TGG - chr2.2:56511833-56511852 None:intergenic 25.0%
!!! GTTTTCATTTTTCTTTTCTG+TGG + chr2.2:56513015-56513034 MS.gene058332:intron 25.0%
AAAGGTAAATGCAAATGCAT+TGG + chr2.2:56511873-56511892 MS.gene058332:intron 30.0%
AATTACAGAAGAAACAGAAC+AGG + chr2.2:56512604-56512623 MS.gene058332:CDS 30.0%
ATCATGTTAGTCCATATCTT+AGG - chr2.2:56513593-56513612 None:intergenic 30.0%
ATGATCTTGACACTTATCAT+AGG + chr2.2:56513608-56513627 MS.gene058332:intron 30.0%
CTTATAGCATATATGGAAAC+AGG - chr2.2:56513683-56513702 None:intergenic 30.0%
TATTTCCTTGCATAGAATCT+AGG + chr2.2:56513459-56513478 MS.gene058332:intron 30.0%
TCCAATCACATTGAAATATC+TGG - chr2.2:56513142-56513161 None:intergenic 30.0%
TCCAGATATTTCAATGTGAT+TGG + chr2.2:56513138-56513157 MS.gene058332:intron 30.0%
TCTAACCATCAAGCATTAAT+CGG - chr2.2:56511639-56511658 None:intergenic 30.0%
TCTGGAAAATGCATATACTA+GGG - chr2.2:56513414-56513433 None:intergenic 30.0%
TGAAATCTTCTCTCTGATAA+AGG + chr2.2:56511855-56511874 MS.gene058332:intron 30.0%
TTGAAAAAGCTTATGGAAAC+AGG - chr2.2:56513750-56513769 None:intergenic 30.0%
! TCAATTTATACATGCTGACT+TGG + chr2.2:56512002-56512021 MS.gene058332:CDS 30.0%
! TGTTCTGTTTCTTCTGTAAT+TGG - chr2.2:56512605-56512624 None:intergenic 30.0%
!! AGTAACATGCTTGTTTTTCT+TGG + chr2.2:56513514-56513533 MS.gene058332:intron 30.0%
!! CAATTTATACATGCTGACTT+GGG + chr2.2:56512003-56512022 MS.gene058332:CDS 30.0%
!! TCTTTTAGGTATGGATTATG+TGG + chr2.2:56511364-56511383 MS.gene058332:intron 30.0%
!! TGTTTTCTTGACTGGTTATT+AGG + chr2.2:56512122-56512141 MS.gene058332:intron 30.0%
!!! AAATTTTGATTAGCACAGAC+TGG - chr2.2:56511900-56511919 None:intergenic 30.0%
!!! TGATTGATATCCTGCTTTTT+TGG + chr2.2:56511696-56511715 MS.gene058332:intron 30.0%
!!! TTTTGTTTTTCGTTGCATCT+TGG + chr2.2:56512673-56512692 MS.gene058332:intron 30.0%
AAAGTAGGCATCTACAATGT+TGG + chr2.2:56514074-56514093 MS.gene058332:CDS 35.0%
AAGTACATGTGCAACATATG+GGG + chr2.2:56512565-56512584 MS.gene058332:CDS 35.0%
AAGTACTCGTAGCTTCATTT+GGG + chr2.2:56512238-56512257 MS.gene058332:intron 35.0%
AATCTGTCACGTGGAAATTT+GGG + chr2.2:56511934-56511953 MS.gene058332:CDS 35.0%
ACAGATTATAACACACCTGA+CGG + chr2.2:56513972-56513991 MS.gene058332:CDS 35.0%
AGATGGCAGTAATGATTCTA+AGG + chr2.2:56512832-56512851 MS.gene058332:CDS 35.0%
AGATTCTTTCAGAAGTCGTA+AGG - chr2.2:56511800-56511819 None:intergenic 35.0%
AGGAACTTCCATAACCATTA+GGG - chr2.2:56514313-56514332 None:intergenic 35.0%
ATAAATATCAGAGTGAGACC+TGG + chr2.2:56511565-56511584 MS.gene058332:intron 35.0%
ATATGGAAAAGCCAAGAAGA+TGG + chr2.2:56512773-56512792 MS.gene058332:CDS 35.0%
ATCAAATACCTTGTTGGTGT+TGG + chr2.2:56512502-56512521 MS.gene058332:CDS 35.0%
ATCTTATCGAGTTACCATAG+TGG + chr2.2:56511816-56511835 MS.gene058332:CDS 35.0%
CAAGTACATGTGCAACATAT+GGG + chr2.2:56512564-56512583 MS.gene058332:CDS 35.0%
CAATTAATCTCCTAACAGGT+TGG - chr2.2:56513346-56513365 None:intergenic 35.0%
CACAATAACTAAACCACGAT+TGG - chr2.2:56512638-56512657 None:intergenic 35.0%
CATATCTTAGGCCTAAGATA+TGG + chr2.2:56513579-56513598 MS.gene058332:intron 35.0%
CATATCTTAGGCCTAAGATA+TGG - chr2.2:56513598-56513579 None:intergenic 35.0%
CCAAATTTAAGCACAAATGG+TGG + chr2.2:56511106-56511125 MS.gene058332:intron 35.0%
CCAACAATTAATCTCCTAAC+AGG - chr2.2:56513350-56513369 None:intergenic 35.0%
CCACCATTTGTGCTTAAATT+TGG - chr2.2:56511109-56511128 None:intergenic 35.0%
CCTGTTAGGAGATTAATTGT+TGG + chr2.2:56513347-56513366 MS.gene058332:intron 35.0%
CTAATCCTAGATTCTATGCA+AGG - chr2.2:56513467-56513486 None:intergenic 35.0%
CTACGAGTACTTACTTAAGA+GGG - chr2.2:56512230-56512249 None:intergenic 35.0%
CTCTTGTAAGGTTCCATTAT+AGG - chr2.2:56512962-56512981 None:intergenic 35.0%
CTGCCAAATTTAAGCACAAA+TGG + chr2.2:56511103-56511122 MS.gene058332:intron 35.0%
GAACACCTTATGCAATATAC+TGG - chr2.2:56511251-56511270 None:intergenic 35.0%
GGAACGACTTTAATGAACAT+CGG + chr2.2:56512694-56512713 MS.gene058332:intron 35.0%
GTCTGGAAAATGCATATACT+AGG - chr2.2:56513415-56513434 None:intergenic 35.0%
GTTTGTGAGTGCTTGTAAAA+AGG + chr2.2:56514124-56514143 MS.gene058332:CDS 35.0%
TAACCCTAAGTCCATATCTT+AGG + chr2.2:56513567-56513586 MS.gene058332:intron 35.0%
TAAGTACTCGTAGCTTCATT+TGG + chr2.2:56512237-56512256 MS.gene058332:intron 35.0%
TAATCTGTCACGTGGAAATT+TGG + chr2.2:56511933-56511952 MS.gene058332:CDS 35.0%
TAGAATCATTACTGCCATCT+TGG - chr2.2:56512832-56512851 None:intergenic 35.0%
TAGGAACTTCCATAACCATT+AGG - chr2.2:56514314-56514333 None:intergenic 35.0%
TATTGATATACCTTCAAGCC+AGG - chr2.2:56513264-56513283 None:intergenic 35.0%
TCAAGTACATGTGCAACATA+TGG + chr2.2:56512563-56512582 MS.gene058332:CDS 35.0%
TGTATAAATTGAAGCCTTCC+AGG - chr2.2:56511994-56512013 None:intergenic 35.0%
TTACGCCAGTATATTGCATA+AGG + chr2.2:56511243-56511262 MS.gene058332:intron 35.0%
! CATAGGTTCATTTTACATCG+CGG - chr2.2:56513916-56513935 None:intergenic 35.0%
! CTATAATGGAACCTTACAAG+AGG + chr2.2:56512960-56512979 MS.gene058332:intron 35.0%
! GATTAATGCTTGATGGTTAG+AGG + chr2.2:56511638-56511657 MS.gene058332:intron 35.0%
! TATCATTAGTTTGGTGAGTC+TGG - chr2.2:56513432-56513451 None:intergenic 35.0%
! TCTGTAATTGGCATCTTTTC+AGG - chr2.2:56512593-56512612 None:intergenic 35.0%
!! ATCTTCTTGGCTTTTCCATA+TGG - chr2.2:56512774-56512793 None:intergenic 35.0%
!! CTTTTCAAGAGCTTTGACAT+GGG - chr2.2:56514042-56514061 None:intergenic 35.0%
!! GTTTTCTAGCACTCAAGTAT+AGG + chr2.2:56511212-56511231 MS.gene058332:intron 35.0%
!! TCTTCTTGGCTTTTCCATAT+GGG - chr2.2:56512773-56512792 None:intergenic 35.0%
!! TGTGTTTGACTTTTGAACCA+TGG - chr2.2:56512990-56513009 None:intergenic 35.0%
!! TGTTCTGTAACTTGTTTGTC+AGG + chr2.2:56512462-56512481 MS.gene058332:intron 35.0%
!!! ATGTTTTTTACTAGCTCTCG+TGG + chr2.2:56513829-56513848 MS.gene058332:intron 35.0%
!!! GCTTTTTCAATTTGTCTCAC+AGG + chr2.2:56513760-56513779 MS.gene058332:intron 35.0%
AAAACTCGCCCTAATGGTTA+TGG + chr2.2:56514302-56514321 MS.gene058332:CDS 40.0%
AAGCTATCCTTGAGAGCTTA+TGG + chr2.2:56513713-56513732 MS.gene058332:intron 40.0%
AAGGCAAAACCTGCTAAAGT+AGG + chr2.2:56514059-56514078 MS.gene058332:CDS 40.0%
AGGCCTAAGATATGGACTTA+GGG - chr2.2:56513573-56513592 None:intergenic 40.0%
AGGTAATTGAAGTCTGGTCA+AGG + chr2.2:56512356-56512375 MS.gene058332:intron 40.0%
AGTGCTTGTAAAAAGGCTAC+AGG + chr2.2:56514131-56514150 MS.gene058332:CDS 40.0%
ATCAGCCGATTAATGCTTGA+TGG + chr2.2:56511631-56511650 MS.gene058332:intron 40.0%
CAAGAAAAACTTTCCCGAGA+AGG - chr2.2:56511409-56511428 None:intergenic 40.0%
CCATGTCAAAGCTCTTGAAA+AGG + chr2.2:56514040-56514059 MS.gene058332:CDS 40.0%
CTATAGGTTATTACCGGACT+AGG - chr2.2:56511491-56511510 None:intergenic 40.0%
GAAAACTGGACCAAAAAAGC+AGG - chr2.2:56511709-56511728 None:intergenic 40.0%
GCTACGAGTACTTACTTAAG+AGG - chr2.2:56512231-56512250 None:intergenic 40.0%
GTCAGAAAAACCAACCTGTT+AGG + chr2.2:56513333-56513352 MS.gene058332:intron 40.0%
TAGGCCTAAGATATGGACTT+AGG - chr2.2:56513574-56513593 None:intergenic 40.0%
TATGTGGATCCAAAGAGGAA+GGG + chr2.2:56511380-56511399 MS.gene058332:CDS 40.0%
TGCAATATACTGGCGTAACA+AGG - chr2.2:56511241-56511260 None:intergenic 40.0%
TGGAAAAGGTAGGTCAGTTA+AGG + chr2.2:56514100-56514119 MS.gene058332:CDS 40.0%
TGGATTATGTGGATCCAAAG+AGG + chr2.2:56511375-56511394 MS.gene058332:CDS 40.0%
TGTTCCAATCAGGATTCGAA+CGG + chr2.2:56512381-56512400 MS.gene058332:intron 40.0%
TTATGTGGATCCAAAGAGGA+AGG + chr2.2:56511379-56511398 MS.gene058332:CDS 40.0%
TTCTGTGACGTATTTCACGT+TGG + chr2.2:56511293-56511312 MS.gene058332:intron 40.0%
TTGTAGATGCCTACTTTAGC+AGG - chr2.2:56514071-56514090 None:intergenic 40.0%
TTTCAGGATAATCTGTCACG+TGG + chr2.2:56511925-56511944 MS.gene058332:intron 40.0%
TTTGCAGCTGTTGCATATGT+GGG + chr2.2:56512189-56512208 MS.gene058332:CDS 40.0%
! AGTTTTCTGTCCATGAACCT+GGG + chr2.2:56511722-56511741 MS.gene058332:intron 40.0%
! ATCTTTTACCACTCCTAGTC+CGG + chr2.2:56511475-56511494 MS.gene058332:CDS 40.0%
! CAACCTGAATGCTCTTTTCA+AGG - chr2.2:56514268-56514287 None:intergenic 40.0%
! TACAATGTTGGCACTGGAAA+AGG + chr2.2:56514086-56514105 MS.gene058332:CDS 40.0%
!! AAAAGAGCATTCAGGTTGCA+TGG + chr2.2:56514270-56514289 MS.gene058332:CDS 40.0%
!! CCTTTTCAAGAGCTTTGACA+TGG - chr2.2:56514043-56514062 None:intergenic 40.0%
!! TAAGCTTTGAAGAACCCTGA+CGG - chr2.2:56511962-56511981 None:intergenic 40.0%
!! TGACCTTGAAAAGAGCATTC+AGG + chr2.2:56514262-56514281 MS.gene058332:CDS 40.0%
!!! GCTTTTCCATATGGGTTGAT+GGG - chr2.2:56512765-56512784 None:intergenic 40.0%
!!! TTCTTTTGGCCTTAATCCTC+CGG + chr2.2:56512290-56512309 MS.gene058332:intron 40.0%
AACCAAACTCCGGATTACCA+GGG - chr2.2:56512333-56512352 None:intergenic 45.0%
ACCGCCTGTCACTAAAACAT+GGG - chr2.2:56511752-56511771 None:intergenic 45.0%
AGTTCGCGTCTGATCTTAGT+CGG - chr2.2:56514221-56514240 None:intergenic 45.0%
ATCTGTTCCTGTAACCTGCA+AGG - chr2.2:56513958-56513977 None:intergenic 45.0%
ATGTGGATCCAAAGAGGAAG+GGG + chr2.2:56511381-56511400 MS.gene058332:CDS 45.0%
ATTACCTCCCAACCAAACTC+CGG - chr2.2:56512343-56512362 None:intergenic 45.0%
CAAAGCTTATTTCCACAGCC+TGG + chr2.2:56511973-56511992 MS.gene058332:CDS 45.0%
CAGAAACCCATCAACCCATA+TGG + chr2.2:56512756-56512775 MS.gene058332:intron 45.0%
CAGGTTCATGGACAGAAAAC+TGG - chr2.2:56511723-56511742 None:intergenic 45.0%
CATAGACTCCAACACCAACA+AGG - chr2.2:56512513-56512532 None:intergenic 45.0%
CTTAATCCTCCGGTTCTCAA+GGG + chr2.2:56512300-56512319 MS.gene058332:intron 45.0%
CTTTGCAGCTGTTGCATATG+TGG + chr2.2:56512188-56512207 MS.gene058332:CDS 45.0%
GACATGTCCATAAGCTCTCA+AGG - chr2.2:56513723-56513742 None:intergenic 45.0%
GATGTCTTCTGCCATCTTCT+TGG - chr2.2:56512787-56512806 None:intergenic 45.0%
GCAACAGATGCAATGAGCAT+AGG - chr2.2:56513933-56513952 None:intergenic 45.0%
GCTCTCTGTCACAGTAATCT+TGG - chr2.2:56513392-56513411 None:intergenic 45.0%
GGACTAGGAGTGGTAAAAGA+TGG - chr2.2:56511476-56511495 None:intergenic 45.0%
GGTCAAGGATTGTTCCAATC+AGG + chr2.2:56512371-56512390 MS.gene058332:intron 45.0%
GTGACGTATTTCACGTTGGT+TGG + chr2.2:56511297-56511316 MS.gene058332:intron 45.0%
GTTCCAATCAGGATTCGAAC+GGG + chr2.2:56512382-56512401 MS.gene058332:intron 45.0%
GTTGGGAGGTAATTGAAGTC+TGG + chr2.2:56512350-56512369 MS.gene058332:intron 45.0%
TAACCCGTTCGAATCCTGAT+TGG - chr2.2:56512388-56512407 None:intergenic 45.0%
TGATTGGATCAGACCCTGAA+GGG + chr2.2:56513154-56513173 MS.gene058332:CDS 45.0%
TGGTAATCCGGAGTTTGGTT+GGG + chr2.2:56512333-56512352 MS.gene058332:intron 45.0%
! ATGTTGGCACTGGAAAAGGT+AGG + chr2.2:56514090-56514109 MS.gene058332:CDS 45.0%
! CAGTTTTCTGTCCATGAACC+TGG + chr2.2:56511721-56511740 MS.gene058332:intron 45.0%
! GTTTTCTGTCCATGAACCTG+GGG + chr2.2:56511723-56511742 MS.gene058332:intron 45.0%
!! CTTGTTGGTGTTGGAGTCTA+TGG + chr2.2:56512511-56512530 MS.gene058332:CDS 45.0%
!! GCATTCAGGTTGCATGGAAA+TGG + chr2.2:56514276-56514295 MS.gene058332:CDS 45.0%
!! GGCTTTTCCATATGGGTTGA+TGG - chr2.2:56512766-56512785 None:intergenic 45.0%
!!! ACCCATGTTTTAGTGACAGG+CGG + chr2.2:56511748-56511767 MS.gene058332:CDS 45.0%
!!! GTCACCCATGTTTTAGTGAC+AGG + chr2.2:56511745-56511764 MS.gene058332:CDS 45.0%
AAGAGGAAGGGGAACCTTCT+CGG + chr2.2:56511392-56511411 MS.gene058332:CDS 50.0%
AATTGAAGCCTTCCAGGCTG+TGG - chr2.2:56511988-56512007 None:intergenic 50.0%
ACAGGTGCGAAATCCAATCG+TGG + chr2.2:56512622-56512641 MS.gene058332:intron 50.0%
ACCATGGCACACCTCTTGTA+AGG - chr2.2:56512974-56512993 None:intergenic 50.0%
ACCGCCTAATGACGTAGATC+TGG - chr2.2:56511075-56511094 None:intergenic 50.0%
ACTAAAACATGGGTGACCCC+AGG - chr2.2:56511742-56511761 None:intergenic 50.0%
AGAAGGTTCCCCTTCCTCTT+TGG - chr2.2:56511392-56511411 None:intergenic 50.0%
AGATCAGACGCGAACTGAAC+TGG + chr2.2:56514225-56514244 MS.gene058332:CDS 50.0%
CAACCAAACTCCGGATTACC+AGG - chr2.2:56512334-56512353 None:intergenic 50.0%
CACCGCCTGTCACTAAAACA+TGG - chr2.2:56511753-56511772 None:intergenic 50.0%
CCTCACCTAATCTCCCTTCA+GGG - chr2.2:56513170-56513189 None:intergenic 50.0%
CCTTAATCCTCCGGTTCTCA+AGG + chr2.2:56512299-56512318 MS.gene058332:intron 50.0%
CCTTGAGAACCGGAGGATTA+AGG - chr2.2:56512302-56512321 None:intergenic 50.0%
CTGGTAATCCGGAGTTTGGT+TGG + chr2.2:56512332-56512351 MS.gene058332:intron 50.0%
GCAGCCAGATCTACGTCATT+AGG + chr2.2:56511068-56511087 MS.gene058332:CDS 50.0%
GCCAGATCTACGTCATTAGG+CGG + chr2.2:56511071-56511090 MS.gene058332:CDS 50.0%
GCTTATTTCCACAGCCTGGA+AGG + chr2.2:56511977-56511996 MS.gene058332:CDS 50.0%
GGCATCTACAATGTTGGCAC+TGG + chr2.2:56514080-56514099 MS.gene058332:CDS 50.0%
GTGATTGGATCAGACCCTGA+AGG + chr2.2:56513153-56513172 MS.gene058332:CDS 50.0%
GTTCGCGTCTGATCTTAGTC+GGG - chr2.2:56514220-56514239 None:intergenic 50.0%
GTTGCTACCTTGCAGGTTAC+AGG + chr2.2:56513948-56513967 MS.gene058332:intron 50.0%
TAATCCGGAGTTTGGTTGGG+AGG + chr2.2:56512336-56512355 MS.gene058332:intron 50.0%
TCAGACCCTGAAGGGAGATT+AGG + chr2.2:56513162-56513181 MS.gene058332:CDS 50.0%
TCTCGAATGCATGTTCCGTC+AGG - chr2.2:56513990-56514009 None:intergenic 50.0%
TGCATCTGTTGCTACCTTGC+AGG + chr2.2:56513941-56513960 MS.gene058332:intron 50.0%
TGGCAGAAAACTCGCCCTAA+TGG + chr2.2:56514296-56514315 MS.gene058332:CDS 50.0%
! ACCTTACAAGAGGTGTGCCA+TGG + chr2.2:56512970-56512989 MS.gene058332:intron 50.0%
! GGTTATTACCGGACTAGGAG+TGG - chr2.2:56511486-56511505 None:intergenic 50.0%
! TGGAAATTTGGGTGCCGTCA+GGG + chr2.2:56511945-56511964 MS.gene058332:CDS 50.0%
ACAGGCGGTGCAGGCTATAT+CGG + chr2.2:56511763-56511782 MS.gene058332:CDS 55.0%
AGACCTGAGCTTCGGGAACA+TGG + chr2.2:56513195-56513214 MS.gene058332:CDS 55.0%
AGAGGAAGGGGAACCTTCTC+GGG + chr2.2:56511393-56511412 MS.gene058332:CDS 55.0%
AGTCGGGTCGCTATACACCT+CGG - chr2.2:56514204-56514223 None:intergenic 55.0%
ATACACCTCGGCGTAATCGC+CGG - chr2.2:56514192-56514211 None:intergenic 55.0%
ATCCTCCGGTTCTCAAGGGA+AGG + chr2.2:56512304-56512323 MS.gene058332:intron 55.0%
CCCTGAAGGGAGATTAGGTG+AGG + chr2.2:56513167-56513186 MS.gene058332:CDS 55.0%
CGGGAACATGGTCGAATCTC+AGG + chr2.2:56513207-56513226 MS.gene058332:CDS 55.0%
GACCCTGGTAATCCGGAGTT+TGG + chr2.2:56512328-56512347 MS.gene058332:intron 55.0%
GCCTCACCTAATCTCCCTTC+AGG - chr2.2:56513171-56513190 None:intergenic 55.0%
TCCTCCGGTTCTCAAGGGAA+GGG + chr2.2:56512305-56512324 MS.gene058332:intron 55.0%
TGTTCCCGAAGCTCAGGTCT+TGG - chr2.2:56513195-56513214 None:intergenic 55.0%
! CGGTCTTATGCCTGGCTTGA+AGG + chr2.2:56513251-56513270 MS.gene058332:CDS 55.0%
! GTGGAAATTTGGGTGCCGTC+AGG + chr2.2:56511944-56511963 MS.gene058332:CDS 55.0%
!! GTTTTAGTGACAGGCGGTGC+AGG + chr2.2:56511754-56511773 MS.gene058332:CDS 55.0%
AGGCGCCAAGACCTGAGCTT+CGG + chr2.2:56513187-56513206 MS.gene058332:CDS 60.0%
CATGGGTGACCCCAGGTTCA+TGG - chr2.2:56511735-56511754 None:intergenic 60.0%
CCTCCGGTTCTCAAGGGAAG+GGG + chr2.2:56512306-56512325 MS.gene058332:intron 60.0%
CGACCATGTTCCCGAAGCTC+AGG - chr2.2:56513201-56513220 None:intergenic 60.0%
GACGTAGATCTGGCTGCCCT+CGG - chr2.2:56511065-56511084 None:intergenic 60.0%
GCGTGCTTTGATGCAGCTCG+CGG + chr2.2:56513231-56513250 MS.gene058332:CDS 60.0%
GGAAGGGGACCCTGGTAATC+CGG + chr2.2:56512321-56512340 MS.gene058332:intron 60.0%
GGTCCCCTTCCCTTGAGAAC+CGG - chr2.2:56512312-56512331 None:intergenic 60.0%
TACACCTCGGCGTAATCGCC+GGG - chr2.2:56514191-56514210 None:intergenic 60.0%
TAGGGCCAGAAGTCAGCCGA+GGG + chr2.2:56511046-56511065 MS.gene058332:CDS 60.0%
TTCTCAAGGGAAGGGGACCC+TGG + chr2.2:56512313-56512332 MS.gene058332:intron 60.0%
CCCCTTCCCTTGAGAACCGG+AGG - chr2.2:56512309-56512328 None:intergenic 65.0%
CTAGGGCCAGAAGTCAGCCG+AGG + chr2.2:56511045-56511064 MS.gene058332:CDS 65.0%
GGCGCCAAGACCTGAGCTTC+GGG + chr2.2:56513188-56513207 MS.gene058332:CDS 65.0%
! GCAGCTCGCGGTCTTATGCC+TGG + chr2.2:56513243-56513262 MS.gene058332:CDS 65.0%
CCTCGGCGTAATCGCCGGGT+CGG - chr2.2:56514187-56514206 None:intergenic 70.0%
CGTAATCGCCGGGTCGGCGT+GGG - chr2.2:56514181-56514200 None:intergenic 70.0%
GACTTCCTCCCACGCCGACC+CGG + chr2.2:56514170-56514189 MS.gene058332:CDS 70.0%
! GGCTGCCCTCGGCTGACTTC+TGG - chr2.2:56511054-56511073 None:intergenic 70.0%
AATCGCCGGGTCGGCGTGGG+AGG - chr2.2:56514178-56514197 None:intergenic 75.0%
CCGACCCGGCGATTACGCCG+AGG + chr2.2:56514184-56514203 MS.gene058332:CDS 75.0%
GCGTAATCGCCGGGTCGGCG+TGG - chr2.2:56514182-56514201 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 56511032 56514334 56511032 ID=MS.gene058332
chr2.2 mRNA 56511032 56514334 56511032 ID=MS.gene058332.t1;Parent=MS.gene058332
chr2.2 exon 56511032 56511092 56511032 ID=MS.gene058332.t1.exon1;Parent=MS.gene058332.t1
chr2.2 CDS 56511032 56511092 56511032 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56511372 56511496 56511372 ID=MS.gene058332.t1.exon2;Parent=MS.gene058332.t1
chr2.2 CDS 56511372 56511496 56511372 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56511724 56511837 56511724 ID=MS.gene058332.t1.exon3;Parent=MS.gene058332.t1
chr2.2 CDS 56511724 56511837 56511724 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56511931 56512038 56511931 ID=MS.gene058332.t1.exon4;Parent=MS.gene058332.t1
chr2.2 CDS 56511931 56512038 56511931 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56512144 56512235 56512144 ID=MS.gene058332.t1.exon5;Parent=MS.gene058332.t1
chr2.2 CDS 56512144 56512235 56512144 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56512484 56512625 56512484 ID=MS.gene058332.t1.exon6;Parent=MS.gene058332.t1
chr2.2 CDS 56512484 56512625 56512484 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56512759 56512853 56512759 ID=MS.gene058332.t1.exon7;Parent=MS.gene058332.t1
chr2.2 CDS 56512759 56512853 56512759 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56513143 56513272 56513143 ID=MS.gene058332.t1.exon8;Parent=MS.gene058332.t1
chr2.2 CDS 56513143 56513272 56513143 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
chr2.2 exon 56513963 56514334 56513963 ID=MS.gene058332.t1.exon9;Parent=MS.gene058332.t1
chr2.2 CDS 56513963 56514334 56513963 ID=cds.MS.gene058332.t1;Parent=MS.gene058332.t1
Gene Sequence

>MS.gene058332

ATGCTAAATTTTTCTAGGGCCAGAAGTCAGCCGAGGGCAGCCAGATCTACGTCATTAGGCGGTAAGTTATTCTGCCAAATTTAAGCACAAATGGTGGTTGACTAACTATCAGATTGTATTGAATGAATCTCGATGTGCTTAAAACATTAATCGATTTCATAATGATAATTTAGATGCGGTGTTTTCTAGCACTCAAGTATAGGATACCTTGTTACGCCAGTATATTGCATAAGGTGTTCATAAAATAATTAGTTGTCGAAATTCTGTGACGTATTTCACGTTGGTTGGTTGTTTTGTTATAATTAATAATTATTTATACTCATAATTTTTGTTCTTTTAGGTATGGATTATGTGGATCCAAAGAGGAAGGGGAACCTTCTCGGGAAAGTTTTTCTTGTTGCAGCATTAACAGCATTATGCATTTTGGTGATTAAGAGATCTCCATCTTTTACCACTCCTAGTCCGGTAATAACCTATAGATTATATTGACTAAAGTATGTAGTAATTGTGATGTTTTGATATATTAGTAATACATAAATATCAGAGTGAGACCTGGAAGAAATAGATATAAATCCTATTGACATGTGAATAAGTTTTTTATCAGCCGATTAATGCTTGATGGTTAGAGGAATAATTTTCAATTTTACCATTTTATTCAATTTATTGATTGATATCCTGCTTTTTTGGTCCAGTTTTCTGTCCATGAACCTGGGGTCACCCATGTTTTAGTGACAGGCGGTGCAGGCTATATCGGCTCACATGCTACCTTACGACTTCTGAAAGAATCTTATCGAGTTACCATAGTGGTATGTCTTTAAAATACTGAAATCTTCTCTCTGATAAAGGTAAATGCAAATGCATTGGACCAGTCTGTGCTAATCAAAATTTCTCTATTTCAGGATAATCTGTCACGTGGAAATTTGGGTGCCGTCAGGGTTCTTCAAAGCTTATTTCCACAGCCTGGAAGGCTTCAATTTATACATGCTGACTTGGGAGATGCAAAATCTGTATCCTTGTTACAGAAAATAATTTGGTGTTACGTTTTTACTTTGATTGAAGCGTATTTGTTAGTGAAATGCCCCAGAAAATTTGTTTTCTTGACTGGTTATTAGGTCGATAAAATATTTTCAGAGAATAAATTTGATGCTGTGATGCACTTTGCAGCTGTTGCATATGTGGGAGAAAGTACACTTTACCCTCTTAAGTAAGTACTCGTAGCTTCATTTGGGAACATTAATTCCAGTTGATAAAGTTGTATTTCTTTTGGCCTTAATCCTCCGGTTCTCAAGGGAAGGGGACCCTGGTAATCCGGAGTTTGGTTGGGAGGTAATTGAAGTCTGGTCAAGGATTGTTCCAATCAGGATTCGAACGGGTTAAATTTGTGTGCTAAACAAAATTAAATTTAATCCATTTCAGTTCTACTTTATTTATGTTCTGTAACTTGTTTGTCAGGTATTATCACAATATTACATCAAATACCTTGTTGGTGTTGGAGTCTATGGCTAAATATAATGTGAAGACATTCATTTATTCAAGTACATGTGCAACATATGGGGAACCTGAAAAGATGCCAATTACAGAAGAAACAGAACAGGTGCGAAATCCAATCGTGGTTTAGTTATTGTGTTTAGTCGATAACTCTTTTGTTTTTCGTTGCATCTTGGAACGACTTTAATGAACATCGGTGTGTAGTGTTTAATCATTGACATTATGTACTTGGATTTCAGAAACCCATCAACCCATATGGAAAAGCCAAGAAGATGGCAGAAGACATCATCCTTGATTTTTCAAAAAATTCCAAGATGGCAGTAATGATTCTAAGGTTTGTATTTTACATCAGCGCTTCAAATTTTCCCCATGTTTTTTGTAGTTCTTTCATGTCTTTTTCAATGTGCCCTTCGTTTAATGATTCTGAATATATCTAACACCTATAATGGAACCTTACAAGAGGTGTGCCATGGTTCAAAAGTCAAACACATTTTTGTTTTCATTTTTCTTTTCTGTGGTTTTAGCAAATAGATCTTTAACATAAAAAAACAGTTATTTTTACTTTATTTTTTAGAATCATTTTGGTTGTAATTATTGATAACTTTTCTTTGGGAAACATCCAGATATTTCAATGTGATTGGATCAGACCCTGAAGGGAGATTAGGTGAGGCGCCAAGACCTGAGCTTCGGGAACATGGTCGAATCTCAGGTGCGTGCTTTGATGCAGCTCGCGGTCTTATGCCTGGCTTGAAGGTATATCAATATTTTCATTTTTACTTTTTGCTAAAATGAAATTGTTTACATAGGTAATAAGTCAGAAAAACCAACCTGTTAGGAGATTAATTGTTGGAACAATATTTGATATATTTCCAAGATTACTGTGACAGAGAGCCCTAGTATATGCATTTTCCAGACTCACCAAACTAATGATAATCTTGATATTTCCTTGCATAGAATCTAGGATTAGTGTCAAGTTTAAACACTTGATATTTGGAGTAACATGCTTGTTTTTCTTGGAACTTAAATTCAATAGAACTTTTTAGTGTATAACCCTAAGTCCATATCTTAGGCCTAAGATATGGACTAACATGATCTTGACACTTATCATAGGAGTGCTTATGTATGAACTATTTCTATAACAAAAGATAAAATTAAGTCAACCTGTTTCCATATATGCTATAAGCTGTTTTTATAAGCTATCCTTGAGAGCTTATGGACATGTCATAACCTGTTTCCATAAGCTTTTTCAATTTGTCTCACAGGCGCTTGTGCCAATAGATAAGCTCAAATAAGTCAATGCAACATGAATATGTTTTTTACTAGCTCTCGTGGAAAACGTGAAGTGATTTTTGCCCAAGTTACTTCAATTCTTGTATGTCTCTAGACTAATATGCCGCGATGTAAAATGAACCTATGCTCATTGCATCTGTTGCTACCTTGCAGGTTACAGGAACAGATTATAACACACCTGACGGAACATGCATTCGAGATTATATTGATGTTACTGATCTTGTTGATGCCCATGTCAAAGCTCTTGAAAAGGCAAAACCTGCTAAAGTAGGCATCTACAATGTTGGCACTGGAAAAGGTAGGTCAGTTAAGGAGTTTGTGAGTGCTTGTAAAAAGGCTACAGGTGTCGACATCAAAGTAGACTTCCTCCCACGCCGACCCGGCGATTACGCCGAGGTGTATAGCGACCCGACTAAGATCAGACGCGAACTGAACTGGACTGCGCAATACACTGACCTTGAAAAGAGCATTCAGGTTGCATGGAAATGGCAGAAAACTCGCCCTAATGGTTATGGAAGTTCCTAG
Protein sequence

>MS.gene058332.t1

MLNFSRARSQPRAARSTSLGGMDYVDPKRKGNLLGKVFLVAALTALCILVIKRSPSFTTPSPFSVHEPGVTHVLVTGGAGYIGSHATLRLLKESYRVTIVDNLSRGNLGAVRVLQSLFPQPGRLQFIHADLGDAKSVDKIFSENKFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLLVLESMAKYNVKTFIYSSTCATYGEPEKMPITEETEQKPINPYGKAKKMAEDIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGLMPGLKVTGTDYNTPDGTCIRDYIDVTDLVDAHVKALEKAKPAKVGIYNVGTGKGRSVKEFVSACKKATGVDIKVDFLPRRPGDYAEVYSDPTKIRRELNWTAQYTDLEKSIQVAWKWQKTRPNGYGSS