AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55903

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55903.t1 MTR_2g032100 98.771 407 5 0 39 445 6 412 0.0 837
MS.gene55903.t1 MTR_8g089180 82.963 405 69 0 39 443 6 410 0.0 712
MS.gene55903.t1 MTR_8g089180 82.963 405 69 0 39 443 6 410 0.0 712
MS.gene55903.t1 MTR_2g032100 98.596 285 4 0 39 323 6 290 0.0 581
MS.gene55903.t1 MTR_5g009170 43.642 346 181 6 106 444 49 387 3.07e-85 266
MS.gene55903.t1 MTR_4g134490 40.286 350 185 7 106 442 27 365 4.05e-82 258
MS.gene55903.t1 MTR_8g096880 40.870 345 190 8 106 442 8 346 1.24e-81 256
MS.gene55903.t1 MTR_8g099535 41.311 351 184 6 106 445 6 345 2.40e-81 255
MS.gene55903.t1 MTR_4g134490 39.437 355 187 7 106 442 27 371 1.09e-80 254
MS.gene55903.t1 MTR_5g009160 40.401 349 186 6 106 443 6 343 1.65e-78 248
MS.gene55903.t1 MTR_8g096880 41.250 320 175 7 106 417 8 322 1.47e-75 239
MS.gene55903.t1 MTR_8g096880 40.830 289 158 7 106 386 8 291 3.13e-64 209
MS.gene55903.t1 MTR_5g009160 39.643 280 148 5 174 443 12 280 4.74e-60 197
MS.gene55903.t1 MTR_5g009160 40.359 223 113 4 174 386 12 224 2.19e-47 163
MS.gene55903.t1 MTR_1g009600 27.119 354 221 13 98 443 1 325 1.46e-27 116
MS.gene55903.t1 MTR_4g102270 27.378 347 212 13 106 434 95 419 1.10e-24 106
MS.gene55903.t1 MTR_4g129820 26.705 352 224 10 98 434 89 421 1.98e-24 105
MS.gene55903.t1 MTR_2g073240 25.833 360 226 13 94 443 11 339 7.55e-24 105
MS.gene55903.t1 MTR_0034s0060 25.215 349 222 12 105 443 138 457 2.19e-23 103
MS.gene55903.t1 MTR_5g011940 26.377 345 218 12 106 434 92 416 2.33e-23 102
MS.gene55903.t1 MTR_4g024600 26.087 345 219 12 106 434 103 427 2.17e-20 93.6
MS.gene55903.t1 MTR_0354s0040 24.638 345 224 12 106 434 84 408 1.83e-18 87.4
MS.gene55903.t1 MTR_3g084090 26.087 345 219 12 106 434 101 425 1.77e-17 84.7
MS.gene55903.t1 MTR_4g063600 23.977 342 210 12 86 417 14 315 4.52e-17 82.4
MS.gene55903.t1 MTR_4g063600 24.058 345 209 12 86 417 14 318 6.15e-17 82.0
MS.gene55903.t1 MTR_4g120030 26.875 320 185 12 106 417 113 391 3.49e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55903.t1 AT1G30620 81.728 405 74 0 39 443 6 410 0.0 711
MS.gene55903.t1 AT1G30620 81.728 405 74 0 39 443 6 410 0.0 711
MS.gene55903.t1 AT1G30620 81.728 405 74 0 39 443 6 410 0.0 711
MS.gene55903.t1 AT1G30620 81.728 405 74 0 39 443 6 410 0.0 711
MS.gene55903.t1 AT1G30620 81.728 405 73 1 39 443 6 409 0.0 707
MS.gene55903.t1 AT4G20460 81.081 407 76 1 39 445 6 411 0.0 697
MS.gene55903.t1 AT5G44480 80.198 404 80 0 41 444 8 411 0.0 649
MS.gene55903.t1 AT5G44480 80.198 404 80 0 41 444 8 411 0.0 649
MS.gene55903.t1 AT5G44480 80.198 404 80 0 41 444 8 411 0.0 649
MS.gene55903.t1 AT5G44480 75.935 428 79 1 41 444 8 435 0.0 637
MS.gene55903.t1 AT1G30620 83.451 284 47 0 39 322 6 289 1.38e-178 501
MS.gene55903.t1 AT2G34850 83.043 230 39 0 216 445 1 230 5.95e-143 408
MS.gene55903.t1 AT2G34850 83.043 230 39 0 216 445 1 230 5.95e-143 408
MS.gene55903.t1 AT2G34850 83.043 230 39 0 216 445 1 230 5.95e-143 408
MS.gene55903.t1 AT2G34850 83.043 230 39 0 216 445 1 230 5.95e-143 408
MS.gene55903.t1 AT1G64440 42.075 347 193 5 103 445 2 344 2.63e-89 275
MS.gene55903.t1 AT4G10960 42.614 352 180 6 105 445 5 345 2.29e-88 273
MS.gene55903.t1 AT4G23920 43.195 338 184 5 106 439 5 338 4.40e-85 265
MS.gene55903.t1 AT1G12780 40.625 352 183 9 105 442 8 347 1.54e-82 258
MS.gene55903.t1 AT1G63180 39.601 351 188 8 105 442 8 347 8.15e-81 254
MS.gene55903.t1 AT1G63180 41.017 295 151 7 105 386 8 292 1.64e-67 218
MS.gene55903.t1 AT1G78570 25.501 349 221 12 105 443 8 327 2.15e-23 103
MS.gene55903.t1 AT3G14790 24.928 349 223 12 105 443 8 327 2.16e-22 100
MS.gene55903.t1 AT3G14790 24.928 349 223 12 105 443 11 330 2.17e-22 100
MS.gene55903.t1 AT1G53500 25.360 347 224 12 105 443 10 329 1.26e-21 98.2
MS.gene55903.t1 AT4G30440 27.195 353 221 12 98 434 82 414 2.68e-21 96.3
MS.gene55903.t1 AT4G00110 26.136 352 224 12 106 441 93 424 1.02e-20 94.4
MS.gene55903.t1 AT2G45310 25.000 348 226 12 102 434 96 423 2.16e-20 93.6
MS.gene55903.t1 AT1G02000 25.797 345 220 12 106 434 94 418 8.99e-20 91.7
MS.gene55903.t1 AT4G12250 26.667 345 217 12 106 434 98 422 1.94e-19 90.5
MS.gene55903.t1 AT3G53520 27.673 318 190 11 106 417 122 405 1.96e-18 87.8
MS.gene55903.t1 AT2G47650 28.037 321 191 12 103 417 120 406 5.49e-18 86.3
MS.gene55903.t1 AT3G62830 27.673 318 190 12 106 417 121 404 3.86e-17 83.6
MS.gene55903.t1 AT3G62830 27.673 318 190 12 106 417 121 404 3.86e-17 83.6
MS.gene55903.t1 AT3G53520 27.358 318 189 12 106 417 122 403 3.70e-16 80.9
MS.gene55903.t1 AT3G23820 24.419 344 226 10 106 434 114 438 4.33e-16 80.5
MS.gene55903.t1 AT2G47650 27.523 327 191 13 103 417 120 412 7.67e-16 79.7
MS.gene55903.t1 AT2G28760 25.538 325 189 14 106 417 33 317 4.16e-15 76.6
MS.gene55903.t1 AT2G28760 25.538 325 189 14 106 417 33 317 4.16e-15 76.6
MS.gene55903.t1 AT2G28760 25.538 325 189 14 106 417 33 317 4.16e-15 76.6
MS.gene55903.t1 AT2G28760 25.538 325 189 14 106 417 64 348 6.08e-15 76.6
MS.gene55903.t1 AT3G46440 24.615 325 192 13 106 417 31 315 6.86e-14 73.2
MS.gene55903.t1 AT3G46440 24.615 325 192 13 106 417 31 315 6.86e-14 73.2
MS.gene55903.t1 AT5G59290 24.308 325 193 13 106 417 25 309 6.98e-14 72.8
MS.gene55903.t1 AT5G59290 24.308 325 193 13 106 417 3 287 7.17e-14 72.8
MS.gene55903.t1 AT5G59290 24.308 325 193 13 106 417 32 316 7.51e-14 72.8
MS.gene55903.t1 AT3G53520 25.948 343 187 13 106 417 122 428 7.54e-14 73.6
MS.gene55903.t1 AT5G59290 24.308 325 193 13 106 417 47 331 8.77e-14 72.8
MS.gene55903.t1 AT3G53520 30.645 186 110 7 106 285 122 294 7.10e-13 70.1

Find 106 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTGTTTCTTCTGTAAT+TGG 0.175667 2.3:+58028034 None:intergenic
ATTAACAGCATTATGCATTT+TGG 0.202310 2.3:-58029201 MS.gene55903:CDS
TAATCTGTCACGTGGAAATA+TGG 0.222294 2.3:-58028704 MS.gene55903:CDS
GATGTCTTCTGCCATCTTCT+TGG 0.228530 2.3:+58027852 None:intergenic
GGCTGCCCTCGGCTGACTTC+TGG 0.230650 2.3:+58029624 None:intergenic
ATTGGTGAAGTGTGAGAAAA+AGG 0.240203 2.3:+58029902 None:intergenic
GTTGCTACCTTGCAGGTTAC+AGG 0.262560 2.3:-58026686 MS.gene55903:intron
CTTGTTGGTGTTGGAGTCTA+TGG 0.271525 2.3:-58028125 MS.gene55903:CDS
AGAAGGTTCCCCTTCCTCTT+TGG 0.279115 2.3:+58029248 None:intergenic
GTTTGTGAGTGCTTGTAAAA+AGG 0.301144 2.3:-58026510 MS.gene55903:CDS
GCCTCACCTAATCTCCCTTC+AGG 0.328567 2.3:+58027466 None:intergenic
TCCAGATATTTCAATGTGAT+TGG 0.333892 2.3:-58027496 MS.gene55903:intron
AGATGGCAGTAATGATTCTA+AGG 0.337776 2.3:-58027804 MS.gene55903:intron
TGTATAAATTGAAGCCTTCC+AGG 0.337951 2.3:+58028646 None:intergenic
CGGTCTTATGCCTGGCTTGA+AGG 0.347715 2.3:-58027383 MS.gene55903:intron
TAGGAACTTCCATAACCATT+AGG 0.353013 2.3:+58026323 None:intergenic
GGCGCCAAGACCTGAGCTTC+GGG 0.358747 2.3:-58027446 MS.gene55903:CDS
TAGAATCATTACTGCCATCT+TGG 0.369999 2.3:+58027807 None:intergenic
TCAAGTACATGTGCAACATA+TGG 0.383124 2.3:-58028073 MS.gene55903:CDS
AGATCAGACGCGAACTGAAC+TGG 0.384651 2.3:-58026409 MS.gene55903:CDS
TACAATGTTGGCACTGGAAA+AGG 0.389995 2.3:-58026548 MS.gene55903:CDS
TGGCAGAAAACTCGCCCTAA+TGG 0.404078 2.3:-58026338 MS.gene55903:CDS
AAAACTCGCCCTAATGGTTA+TGG 0.406101 2.3:-58026332 MS.gene55903:CDS
CATGGGTGACCCCAGGTTCA+TGG 0.408868 2.3:+58028905 None:intergenic
ACAGGCGGTGCAGGCTATAT+CGG 0.410666 2.3:-58028874 MS.gene55903:CDS
GCAGCTCGCGGTCTTATGCC+TGG 0.412061 2.3:-58027391 MS.gene55903:CDS
CGGGAACATGGTCGAATCTC+AGG 0.412089 2.3:-58027427 MS.gene55903:CDS
AGAGGAAGGGGAACCTTCTC+GGG 0.414862 2.3:-58029244 MS.gene55903:CDS
GCATTCAGGTTGCATGGAAA+TGG 0.417518 2.3:-58026358 MS.gene55903:CDS
CAAGTACATGTGCAACATAT+GGG 0.418366 2.3:-58028072 MS.gene55903:CDS
CGTAATCGCCGGGTCGGCGT+GGG 0.421140 2.3:+58026456 None:intergenic
AGGCGCCAAGACCTGAGCTT+CGG 0.423305 2.3:-58027447 MS.gene55903:CDS
TTGTAGATGCCTACTTTAGC+AGG 0.425630 2.3:+58026566 None:intergenic
CTTTGCAGCTGTTGCATATG+TGG 0.425641 2.3:-58028449 MS.gene55903:CDS
AAGAGGAAGGGGAACCTTCT+CGG 0.427697 2.3:-58029245 MS.gene55903:CDS
TGTTCCCGAAGCTCAGGTCT+TGG 0.431938 2.3:+58027442 None:intergenic
GCTACGAGTACTTACTTAAG+AGG 0.432049 2.3:+58028409 None:intergenic
GTGGAAATATGGGTGCCGTC+AGG 0.433888 2.3:-58028693 MS.gene55903:CDS
ATCAAATACCTTGTTGGTGT+TGG 0.436328 2.3:-58028134 MS.gene55903:CDS
TATTACATCAAATACCTTGT+TGG 0.439822 2.3:-58028140 MS.gene55903:CDS
CTATAGGTTATTACCGGACT+AGG 0.447127 2.3:+58029149 None:intergenic
GCAGCCAGATCTACGTCATT+AGG 0.448269 2.3:-58029607 MS.gene55903:CDS
TGACCTTGAAAAGAGCATTC+AGG 0.450737 2.3:-58026372 MS.gene55903:CDS
AGGAACTTCCATAACCATTA+GGG 0.453384 2.3:+58026324 None:intergenic
CAGAAACCCATCAACCCATA+TGG 0.462557 2.3:-58027880 MS.gene55903:CDS
AGTTCGCGTCTGATCTTAGT+CGG 0.469727 2.3:+58026416 None:intergenic
TGGAAAAGGTAGGTCAGTTA+AGG 0.470945 2.3:-58026534 MS.gene55903:CDS
ATACACCTCGGCGTAATCGC+CGG 0.470989 2.3:+58026445 None:intergenic
TCAGACCCTGAAGGGAGATT+AGG 0.474227 2.3:-58027472 MS.gene55903:CDS
CGACCATGTTCCCGAAGCTC+AGG 0.475626 2.3:+58027436 None:intergenic
AATCTGTCACGTGGAAATAT+GGG 0.482953 2.3:-58028703 MS.gene55903:CDS
TCTCGAATGCATGTTCCGTC+AGG 0.484723 2.3:+58026647 None:intergenic
GCGTAATCGCCGGGTCGGCG+TGG 0.492139 2.3:+58026455 None:intergenic
ACCGCCTAATGACGTAGATC+TGG 0.495255 2.3:+58029603 None:intergenic
TCAATTTATACATGCTGACT+TGG 0.497293 2.3:-58028635 MS.gene55903:CDS
CACCGCCTGTCACTAAAACA+TGG 0.497909 2.3:+58028887 None:intergenic
TACACCTCGGCGTAATCGCC+GGG 0.503070 2.3:+58026446 None:intergenic
AATTGAAGCCTTCCAGGCTG+TGG 0.505432 2.3:+58028652 None:intergenic
CCTCACCTAATCTCCCTTCA+GGG 0.505866 2.3:+58027467 None:intergenic
AATCGCCGGGTCGGCGTGGG+AGG 0.507187 2.3:+58026459 None:intergenic
GGCATCTACAATGTTGGCAC+TGG 0.509978 2.3:-58026554 MS.gene55903:CDS
CAAAGCTTATTTCCACAGCC+TGG 0.514442 2.3:-58028664 MS.gene55903:CDS
GCTTATTTCCACAGCCTGGA+AGG 0.517355 2.3:-58028660 MS.gene55903:CDS
CAATTTATACATGCTGACTT+GGG 0.517817 2.3:-58028634 MS.gene55903:CDS
AAAAGAGCATTCAGGTTGCA+TGG 0.521967 2.3:-58026364 MS.gene55903:CDS
TGGAAATATGGGTGCCGTCA+GGG 0.524586 2.3:-58028692 MS.gene55903:CDS
ATATCACTCAAGATCCTCCT+AGG 0.526459 2.3:-58029722 MS.gene55903:intron
AAAGTAGGCATCTACAATGT+TGG 0.534999 2.3:-58026560 MS.gene55903:CDS
CCATGTCAAAGCTCTTGAAA+AGG 0.535022 2.3:-58026594 MS.gene55903:CDS
AGACCTGAGCTTCGGGAACA+TGG 0.536889 2.3:-58027439 MS.gene55903:CDS
GACTTCCTCCCACGCCGACC+CGG 0.539754 2.3:-58026464 MS.gene55903:CDS
TATTGATATACCTTCAAGCC+AGG 0.549755 2.3:+58027373 None:intergenic
AAGGCAAAACCTGCTAAAGT+AGG 0.550752 2.3:-58026575 MS.gene55903:CDS
AGATTCTTTCAGAAGTCGTA+AGG 0.553619 2.3:+58028840 None:intergenic
GGACTAGGAGTGGTAAAAGA+TGG 0.555652 2.3:+58029164 None:intergenic
GACGTAGATCTGGCTGCCCT+CGG 0.560703 2.3:+58029613 None:intergenic
GTTCGCGTCTGATCTTAGTC+GGG 0.560906 2.3:+58026417 None:intergenic
ATGTGGATCCAAAGAGGAAG+GGG 0.563802 2.3:-58029256 MS.gene55903:CDS
AATTACAGAAGAAACAGAAC+AGG 0.565287 2.3:-58028032 MS.gene55903:intron
TTTGCAGCTGTTGCATATGT+GGG 0.570119 2.3:-58028448 MS.gene55903:CDS
ATATGGAAAAGCCAAGAAGA+TGG 0.574141 2.3:-58027863 MS.gene55903:CDS
TTATGTGGATCCAAAGAGGA+AGG 0.575624 2.3:-58029258 MS.gene55903:CDS
ACCGCCTGTCACTAAAACAT+GGG 0.580269 2.3:+58028888 None:intergenic
ACTAAAACATGGGTGACCCC+AGG 0.588648 2.3:+58028898 None:intergenic
TAGGGCCAGAAGTCAGCCGA+GGG 0.590065 2.3:-58029629 MS.gene55903:CDS
CTACGAGTACTTACTTAAGA+GGG 0.593376 2.3:+58028410 None:intergenic
GCGTGCTTTGATGCAGCTCG+CGG 0.606051 2.3:-58027403 MS.gene55903:CDS
CCTCGGCGTAATCGCCGGGT+CGG 0.614235 2.3:+58026450 None:intergenic
GTGATTGGATCAGACCCTGA+AGG 0.618887 2.3:-58027481 MS.gene55903:CDS
TGATTGGATCAGACCCTGAA+GGG 0.619541 2.3:-58027480 MS.gene55903:CDS
ATCTTATCGAGTTACCATAG+TGG 0.621643 2.3:-58028821 MS.gene55903:intron
ACAGATTATAACACACCTGA+CGG 0.628409 2.3:-58026662 MS.gene55903:CDS
TATGTGGATCCAAAGAGGAA+GGG 0.629689 2.3:-58029257 MS.gene55903:CDS
GGTTATTACCGGACTAGGAG+TGG 0.633999 2.3:+58029154 None:intergenic
CATAGACTCCAACACCAACA+AGG 0.636337 2.3:+58028126 None:intergenic
CCCTGAAGGGAGATTAGGTG+AGG 0.640331 2.3:-58027467 MS.gene55903:CDS
AAGTACATGTGCAACATATG+GGG 0.646312 2.3:-58028071 MS.gene55903:CDS
TGGATTATGTGGATCCAAAG+AGG 0.648120 2.3:-58029262 MS.gene55903:CDS
CTAGGGCCAGAAGTCAGCCG+AGG 0.650591 2.3:-58029630 MS.gene55903:intron
CATCAAGGTCCACACCTAGG+AGG 0.666399 2.3:+58029708 None:intergenic
TTTCAGGATAATCTGTCACG+TGG 0.666637 2.3:-58028712 MS.gene55903:intron
GCCAGATCTACGTCATTAGG+CGG 0.668959 2.3:-58029604 MS.gene55903:intron
TAAGCTTTGAAGAACCCTGA+CGG 0.700404 2.3:+58028678 None:intergenic
ATGTTGGCACTGGAAAAGGT+AGG 0.713854 2.3:-58026544 MS.gene55903:CDS
CCGACCCGGCGATTACGCCG+AGG 0.722521 2.3:-58026450 MS.gene55903:CDS
AGTCGGGTCGCTATACACCT+CGG 0.765609 2.3:+58026433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATAAATTGAATAAAA+TGG + chr2.3:58027271-58027290 None:intergenic 10.0%
!!! TTTATTTTTTAGAATCATTT+TGG - chr2.3:58028675-58028694 MS.gene55903:CDS 10.0%
!! TAAAATGAAATTGTTTACAT+AGG - chr2.3:58028897-58028916 MS.gene55903:CDS 15.0%
!!! AATTATTGATAACTTTTCTT+TGG - chr2.3:58028702-58028721 MS.gene55903:CDS 15.0%
!!! ATTATTGATAACTTTTCTTT+GGG - chr2.3:58028703-58028722 MS.gene55903:CDS 15.0%
!!! TTTCTTTACAAAAGTTTTAT+TGG + chr2.3:58026346-58026365 None:intergenic 15.0%
!! AAATGAAAACAAAAATGTGT+TGG + chr2.3:58028596-58028615 None:intergenic 20.0%
!! AAGTTTAAACACTTGATATT+TGG - chr2.3:58029084-58029103 MS.gene55903:intron 20.0%
!! AATATATCTTACACCTATAA+TGG - chr2.3:58028537-58028556 MS.gene55903:intron 20.0%
!! AATCAAAATTTCTCTATTTC+AGG - chr2.3:58027499-58027518 MS.gene55903:intron 20.0%
!! CTTTAGTCAATATAATCTAT+AGG + chr2.3:58027097-58027116 None:intergenic 20.0%
!! TAAATAAAGTAGAACTGAAA+TGG + chr2.3:58028033-58028052 None:intergenic 20.0%
!! TATAATCTATAGGTTATTAC+CGG + chr2.3:58027087-58027106 None:intergenic 20.0%
!! TATCAAGATTATCATTAGTT+TGG + chr2.3:58029034-58029053 None:intergenic 20.0%
!! TCATAATGATAATTTAGATG+CGG - chr2.3:58026740-58026759 MS.gene55903:intron 20.0%
!!! TACTTATGTTTCTTTCTTTT+AGG - chr2.3:58026940-58026959 MS.gene55903:intron 20.0%
!!! TGATAAAGTTGTATTTCTTT+TGG - chr2.3:58027867-58027886 MS.gene55903:CDS 20.0%
!!! TGGAATTTTTTGAAAAATCA+AGG + chr2.3:58028403-58028422 None:intergenic 20.0%
!!! TTTCATTTTTCTTTTCTTTG+TGG - chr2.3:58028608-58028627 MS.gene55903:intron 20.0%
!!! TTTTCATTTTAAACTGCTTT+AGG - chr2.3:58026424-58026443 MS.gene55903:CDS 20.0%
!!! TTTTTCAAAAAATTCCAAGA+TGG - chr2.3:58028406-58028425 MS.gene55903:intron 20.0%
! AAAACAGCTTATAGCATATA+TGG + chr2.3:58029283-58029302 None:intergenic 25.0%
! AAACTTATTCACATGTCAAT+AGG + chr2.3:58027198-58027217 None:intergenic 25.0%
! AAAGAACTACAAAAAACATG+GGG + chr2.3:58028479-58028498 None:intergenic 25.0%
! AATCATTGACATTATGTACT+TGG - chr2.3:58028320-58028339 MS.gene55903:intron 25.0%
! ACTTATTTGAGCTTATCTAT+TGG + chr2.3:58029387-58029406 None:intergenic 25.0%
! AGAAATACAACTTTATCAAC+TGG + chr2.3:58027865-58027884 None:intergenic 25.0%
! AGACAAATTGAAAAAGCTTA+TGG + chr2.3:58029350-58029369 None:intergenic 25.0%
! ATACAAGAATTGAAGTAACT+TGG + chr2.3:58029469-58029488 None:intergenic 25.0%
! ATTCAGAATCATTAAACGAA+GGG + chr2.3:58028520-58028539 None:intergenic 25.0%
! CAGAACAAAAAACAAACAAA+TGG + chr2.3:58026399-58026418 None:intergenic 25.0%
! CCTTGTTACAGAAAATAATT+TGG - chr2.3:58027633-58027652 MS.gene55903:intron 25.0%
! GAAAGAACTACAAAAAACAT+GGG + chr2.3:58028480-58028499 None:intergenic 25.0%
! TACAAGAATTGAAGTAACTT+GGG + chr2.3:58029468-58029487 None:intergenic 25.0%
! TATTACATCAAATACCTTGT+TGG - chr2.3:58028087-58028106 MS.gene55903:CDS 25.0%
! TATTCAGAATCATTAAACGA+AGG + chr2.3:58028521-58028540 None:intergenic 25.0%
! TGAAAGAACTACAAAAAACA+TGG + chr2.3:58028481-58028500 None:intergenic 25.0%
!! AAGTTTTCTTTCTTTTCTCT+TGG + chr2.3:58026461-58026480 None:intergenic 25.0%
!! AGTCAAGAAAACAAATTTTC+TGG + chr2.3:58027705-58027724 None:intergenic 25.0%
!! ATTAACAGCATTATGCATTT+TGG - chr2.3:58027026-58027045 MS.gene55903:intron 25.0%
!! CCAAATTATTTTCTGTAACA+AGG + chr2.3:58027636-58027655 None:intergenic 25.0%
!! GATTTATATCTATTTCTTCC+AGG + chr2.3:58027176-58027195 None:intergenic 25.0%
!! GCAAATGCTAAATTTTTCTA+GGG - chr2.3:58026580-58026599 MS.gene55903:CDS 25.0%
!! GTCAAGAAAACAAATTTTCT+GGG + chr2.3:58027704-58027723 None:intergenic 25.0%
!! TCAAGAAAACAAATTTTCTG+GGG + chr2.3:58027703-58027722 None:intergenic 25.0%
!! TGCAAATGCTAAATTTTTCT+AGG - chr2.3:58026579-58026598 MS.gene55903:CDS 25.0%
!!! AGAAAATTTGTTTTCTTGAC+TGG - chr2.3:58027704-58027723 MS.gene55903:intron 25.0%
!!! ATGTTTCTTTCTTTTAGGTA+TGG - chr2.3:58026945-58026964 MS.gene55903:intron 25.0%
!!! ATTTTAAAGACATACCACTA+TGG + chr2.3:58027423-58027442 None:intergenic 25.0%
AAAGGTAAATGCAAATGCAT+TGG - chr2.3:58027463-58027482 MS.gene55903:CDS 30.0%
AATTACAGAAGAAACAGAAC+AGG - chr2.3:58028195-58028214 MS.gene55903:intron 30.0%
ATCATGTTAGTCCATATCTT+AGG + chr2.3:58029186-58029205 None:intergenic 30.0%
CAATATCAATGATCACATCA+AGG + chr2.3:58026537-58026556 None:intergenic 30.0%
CTTATAGCATATATGGAAAC+AGG + chr2.3:58029276-58029295 None:intergenic 30.0%
CTTGATGTGATCATTGATAT+TGG - chr2.3:58026535-58026554 MS.gene55903:CDS 30.0%
TAGCATTTGCAAAATCAACA+AGG + chr2.3:58026570-58026589 None:intergenic 30.0%
TATTTCCTTGCATAGAATCT+AGG - chr2.3:58029052-58029071 MS.gene55903:intron 30.0%
TCCAATCACATTGAAATATC+TGG + chr2.3:58028735-58028754 None:intergenic 30.0%
TCCAGATATTTCAATGTGAT+TGG - chr2.3:58028731-58028750 MS.gene55903:intron 30.0%
TCTAACCATCAAGCATTAAT+CGG + chr2.3:58027229-58027248 None:intergenic 30.0%
TCTGGAAAATGCATATACTA+GGG + chr2.3:58029007-58029026 None:intergenic 30.0%
TGAAAACTTCTCTCTGATAA+AGG - chr2.3:58027445-58027464 MS.gene55903:CDS 30.0%
TTGAAAAAGCTTATGGAAAC+AGG + chr2.3:58029343-58029362 None:intergenic 30.0%
! TCAATTTATACATGCTGACT+TGG - chr2.3:58027592-58027611 MS.gene55903:intron 30.0%
! TGTTCTGTTTCTTCTGTAAT+TGG + chr2.3:58028196-58028215 None:intergenic 30.0%
!! AGTAACATGCTTGTTTTTCT+TGG - chr2.3:58029107-58029126 MS.gene55903:intron 30.0%
!! CAATTTATACATGCTGACTT+GGG - chr2.3:58027593-58027612 MS.gene55903:intron 30.0%
!! TCTTTTAGGTATGGATTATG+TGG - chr2.3:58026954-58026973 MS.gene55903:intron 30.0%
!! TGTTTTCTTGACTGGTTATT+AGG - chr2.3:58027712-58027731 MS.gene55903:intron 30.0%
!!! AAATTTTGATTAGCACAGAC+TGG + chr2.3:58027490-58027509 None:intergenic 30.0%
!!! TGATTGATATCCTGCTTTTT+TGG - chr2.3:58027286-58027305 MS.gene55903:intron 30.0%
!!! TTTTGTTTTTCGTTGCATCT+TGG - chr2.3:58028264-58028283 MS.gene55903:intron 30.0%
AAAGTAGGCATCTACAATGT+TGG - chr2.3:58029667-58029686 MS.gene55903:intron 35.0%
AAGTACATGTGCAACATATG+GGG - chr2.3:58028156-58028175 MS.gene55903:intron 35.0%
AAGTACTCGTAGCTTTCATT+TGG - chr2.3:58027828-58027847 MS.gene55903:CDS 35.0%
AATCTGTCACGTGGAAATAT+GGG - chr2.3:58027524-58027543 MS.gene55903:intron 35.0%
ACAAATGGATGAGTCAATCA+AGG + chr2.3:58026384-58026403 None:intergenic 35.0%
ACAGATTATAACACACCTGA+CGG - chr2.3:58029565-58029584 MS.gene55903:intron 35.0%
AGATGGCAGTAATGATTCTA+AGG - chr2.3:58028423-58028442 MS.gene55903:intron 35.0%
AGATTCTTTCAGAAGTCGTA+AGG + chr2.3:58027390-58027409 None:intergenic 35.0%
AGGAACTTCCATAACCATTA+GGG + chr2.3:58029906-58029925 None:intergenic 35.0%
AGTACTCGTAGCTTTCATTT+GGG - chr2.3:58027829-58027848 MS.gene55903:CDS 35.0%
ATAAATATCAGAGTGAGACC+TGG - chr2.3:58027155-58027174 MS.gene55903:intron 35.0%
ATATGGAAAAGCCAAGAAGA+TGG - chr2.3:58028364-58028383 MS.gene55903:intron 35.0%
ATCAAATACCTTGTTGGTGT+TGG - chr2.3:58028093-58028112 MS.gene55903:CDS 35.0%
ATCTTATCGAGTTACCATAG+TGG - chr2.3:58027406-58027425 MS.gene55903:CDS 35.0%
ATGATCTTGGCACTTATCAT+AGG - chr2.3:58029201-58029220 MS.gene55903:CDS 35.0%
ATTGGTGAAGTGTGAGAAAA+AGG + chr2.3:58026328-58026347 None:intergenic 35.0%
CAAATGGATGAGTCAATCAA+GGG + chr2.3:58026383-58026402 None:intergenic 35.0%
CAAGTACATGTGCAACATAT+GGG - chr2.3:58028155-58028174 MS.gene55903:CDS 35.0%
CAATTAATCTCCTAACAGGT+TGG + chr2.3:58028939-58028958 None:intergenic 35.0%
CACAATAACTAAACCACGAT+TGG + chr2.3:58028229-58028248 None:intergenic 35.0%
CATATCTTAGGCCTAAGATA+TGG - chr2.3:58029172-58029191 MS.gene55903:CDS 35.0%
CATATCTTAGGCCTAAGATA+TGG + chr2.3:58029191-58029172 None:intergenic 35.0%
CCAAATTTAAGCACAAATGG+TGG - chr2.3:58026658-58026677 MS.gene55903:CDS 35.0%
CCAACAATTAATCTCCTAAC+AGG + chr2.3:58028943-58028962 None:intergenic 35.0%
CCACCATTTGTGCTTAAATT+TGG + chr2.3:58026661-58026680 None:intergenic 35.0%
CCTGTTAGGAGATTAATTGT+TGG - chr2.3:58028940-58028959 MS.gene55903:intron 35.0%
CTAATCCTAGATTCTATGCA+AGG + chr2.3:58029060-58029079 None:intergenic 35.0%
CTACGAGTACTTACTTAAGA+GGG + chr2.3:58027820-58027839 None:intergenic 35.0%
CTCTTGTAAGGTTCCATTAT+AGG + chr2.3:58028553-58028572 None:intergenic 35.0%
CTGCCAAATTTAAGCACAAA+TGG - chr2.3:58026655-58026674 MS.gene55903:CDS 35.0%
GAACACCTTATGCAATATAC+TGG + chr2.3:58026803-58026822 None:intergenic 35.0%
GGAACGACTTTAATGAACAT+CGG - chr2.3:58028285-58028304 MS.gene55903:intron 35.0%
GTCTGGAAAATGCATATACT+AGG + chr2.3:58029008-58029027 None:intergenic 35.0%
GTTTGTGAGTGCTTGTAAAA+AGG - chr2.3:58029717-58029736 MS.gene55903:intron 35.0%
TAACCCTAAGTCCATATCTT+AGG - chr2.3:58029160-58029179 MS.gene55903:intron 35.0%
TAATCTGTCACGTGGAAATA+TGG - chr2.3:58027523-58027542 MS.gene55903:intron 35.0%
TAGAATCATTACTGCCATCT+TGG + chr2.3:58028423-58028442 None:intergenic 35.0%
TAGGAACTTCCATAACCATT+AGG + chr2.3:58029907-58029926 None:intergenic 35.0%
TATTGATATACCTTCAAGCC+AGG + chr2.3:58028857-58028876 None:intergenic 35.0%
TCAAGTACATGTGCAACATA+TGG - chr2.3:58028154-58028173 MS.gene55903:CDS 35.0%
TGTATAAATTGAAGCCTTCC+AGG + chr2.3:58027584-58027603 None:intergenic 35.0%
TTACGCCAGTATATTGCATA+AGG - chr2.3:58026795-58026814 MS.gene55903:intron 35.0%
! CATAGGTTCATTTTACATCG+CGG + chr2.3:58029509-58029528 None:intergenic 35.0%
! CTATAATGGAACCTTACAAG+AGG - chr2.3:58028551-58028570 MS.gene55903:intron 35.0%
! GATATGGACTAACATGATCT+TGG - chr2.3:58029188-58029207 MS.gene55903:CDS 35.0%
! GATTAATGCTTGATGGTTAG+AGG - chr2.3:58027228-58027247 MS.gene55903:intron 35.0%
! TATCATTAGTTTGGTGAGTC+TGG + chr2.3:58029025-58029044 None:intergenic 35.0%
! TCTGTAATTGGCATCTTTTC+AGG + chr2.3:58028184-58028203 None:intergenic 35.0%
!! ATCTTCTTGGCTTTTCCATA+TGG + chr2.3:58028365-58028384 None:intergenic 35.0%
!! CTTTTCAAGAGCTTTGACAT+GGG + chr2.3:58029635-58029654 None:intergenic 35.0%
!! GTTTTCTAGCACTCAAGTAT+AGG - chr2.3:58026764-58026783 MS.gene55903:intron 35.0%
!! TCTTCTTGGCTTTTCCATAT+GGG + chr2.3:58028364-58028383 None:intergenic 35.0%
!! TGTTCTGTAACTTGTTTGTC+AGG - chr2.3:58028053-58028072 MS.gene55903:CDS 35.0%
!!! ATGTTTTTTACTAGCTCTCG+TGG - chr2.3:58029422-58029441 MS.gene55903:intron 35.0%
!!! GCTTTTTCAATTTGTCTCAC+AGG - chr2.3:58029353-58029372 MS.gene55903:intron 35.0%
AAAACTCGCCCTAATGGTTA+TGG - chr2.3:58029895-58029914 MS.gene55903:CDS 40.0%
AACCAAACTCCAGATTACCA+GGG + chr2.3:58027924-58027943 None:intergenic 40.0%
AAGCTATCCTTGAGAGCTTA+TGG - chr2.3:58029306-58029325 MS.gene55903:intron 40.0%
AAGGCAAAACCTGCTAAAGT+AGG - chr2.3:58029652-58029671 MS.gene55903:intron 40.0%
AGGCCTAAGATATGGACTTA+GGG + chr2.3:58029166-58029185 None:intergenic 40.0%
AGGTAATTGAAGTCTGGTCA+AGG - chr2.3:58027947-58027966 MS.gene55903:intron 40.0%
AGTGCTTGTAAAAAGGCTAC+AGG - chr2.3:58029724-58029743 MS.gene55903:CDS 40.0%
ATATCACTCAAGATCCTCCT+AGG - chr2.3:58026505-58026524 MS.gene55903:CDS 40.0%
ATCAGCCGATTAATGCTTGA+TGG - chr2.3:58027221-58027240 MS.gene55903:intron 40.0%
CAAGAAAAACTTTCCCGAGA+AGG + chr2.3:58026999-58027018 None:intergenic 40.0%
CCATGTCAAAGCTCTTGAAA+AGG - chr2.3:58029633-58029652 MS.gene55903:intron 40.0%
CTATAGGTTATTACCGGACT+AGG + chr2.3:58027081-58027100 None:intergenic 40.0%
GAAAACTGGACCAAAAAAGC+AGG + chr2.3:58027299-58027318 None:intergenic 40.0%
GCTACGAGTACTTACTTAAG+AGG + chr2.3:58027821-58027840 None:intergenic 40.0%
GTCAGAAAAACCAACCTGTT+AGG - chr2.3:58028926-58028945 MS.gene55903:intron 40.0%
TAGGCCTAAGATATGGACTT+AGG + chr2.3:58029167-58029186 None:intergenic 40.0%
TATGTGGATCCAAAGAGGAA+GGG - chr2.3:58026970-58026989 MS.gene55903:intron 40.0%
TGCAATATACTGGCGTAACA+AGG + chr2.3:58026793-58026812 None:intergenic 40.0%
TGGAAAAGGTAGGTCAGTTA+AGG - chr2.3:58029693-58029712 MS.gene55903:intron 40.0%
TGGATTATGTGGATCCAAAG+AGG - chr2.3:58026965-58026984 MS.gene55903:intron 40.0%
TGTTCCAATCAGGATTCGAA+CGG - chr2.3:58027972-58027991 MS.gene55903:intron 40.0%
TTATGTGGATCCAAAGAGGA+AGG - chr2.3:58026969-58026988 MS.gene55903:intron 40.0%
TTCTGTGACGTATTTCACGT+TGG - chr2.3:58026845-58026864 MS.gene55903:intron 40.0%
TTGTAGATGCCTACTTTAGC+AGG + chr2.3:58029664-58029683 None:intergenic 40.0%
TTTCAGGATAATCTGTCACG+TGG - chr2.3:58027515-58027534 MS.gene55903:intron 40.0%
TTTGCAGCTGTTGCATATGT+GGG - chr2.3:58027779-58027798 MS.gene55903:intron 40.0%
! AGTTTTCTGTCCATGAACCT+GGG - chr2.3:58027312-58027331 MS.gene55903:intron 40.0%
! ATCTTTTACCACTCCTAGTC+CGG - chr2.3:58027065-58027084 MS.gene55903:intron 40.0%
! CAACCTGAATGCTCTTTTCA+AGG + chr2.3:58029861-58029880 None:intergenic 40.0%
! TACAATGTTGGCACTGGAAA+AGG - chr2.3:58029679-58029698 MS.gene55903:intron 40.0%
! TGGTAATCTGGAGTTTGGTT+GGG - chr2.3:58027924-58027943 MS.gene55903:intron 40.0%
! TGTGTTGGACTTTTGAACCA+TGG + chr2.3:58028581-58028600 None:intergenic 40.0%
!! AAAAGAGCATTCAGGTTGCA+TGG - chr2.3:58029863-58029882 MS.gene55903:intron 40.0%
!! CCTTTTCAAGAGCTTTGACA+TGG + chr2.3:58029636-58029655 None:intergenic 40.0%
!! TAAGCTTTGAAGAACCCTGA+CGG + chr2.3:58027552-58027571 None:intergenic 40.0%
!! TGACCTTGAAAAGAGCATTC+AGG - chr2.3:58029855-58029874 MS.gene55903:intron 40.0%
!!! GCTTTTCCATATGGGTTGAT+GGG + chr2.3:58028356-58028375 None:intergenic 40.0%
!!! TTCTTTTGGCCTTAATCCTC+CGG - chr2.3:58027881-58027900 MS.gene55903:intron 40.0%
ACCGCCTGTCACTAAAACAT+GGG + chr2.3:58027342-58027361 None:intergenic 45.0%
AGTTCGCGTCTGATCTTAGT+CGG + chr2.3:58029814-58029833 None:intergenic 45.0%
ATCTGTTCCTGTAACCTGCA+AGG + chr2.3:58029551-58029570 None:intergenic 45.0%
ATGTGGATCCAAAGAGGAAG+GGG - chr2.3:58026971-58026990 MS.gene55903:intron 45.0%
CAAAGCTTATTTCCACAGCC+TGG - chr2.3:58027563-58027582 MS.gene55903:intron 45.0%
CAACCAAACTCCAGATTACC+AGG + chr2.3:58027925-58027944 None:intergenic 45.0%
CAGAAACCCATCAACCCATA+TGG - chr2.3:58028347-58028366 MS.gene55903:intron 45.0%
CAGGTTCATGGACAGAAAAC+TGG + chr2.3:58027313-58027332 None:intergenic 45.0%
CATAGACTCCAACACCAACA+AGG + chr2.3:58028104-58028123 None:intergenic 45.0%
CTTAATCCTCCGGTTCTCAA+GGG - chr2.3:58027891-58027910 MS.gene55903:intron 45.0%
CTTTGCAGCTGTTGCATATG+TGG - chr2.3:58027778-58027797 MS.gene55903:intron 45.0%
GACATGTCCATAAGCTCTCA+AGG + chr2.3:58029316-58029335 None:intergenic 45.0%
GATGTCTTCTGCCATCTTCT+TGG + chr2.3:58028378-58028397 None:intergenic 45.0%
GCAACAGATGCAATGAGCAT+AGG + chr2.3:58029526-58029545 None:intergenic 45.0%
GCTCTCTGTCACAGTAATCT+TGG + chr2.3:58028985-58029004 None:intergenic 45.0%
GGACTAGGAGTGGTAAAAGA+TGG + chr2.3:58027066-58027085 None:intergenic 45.0%
GGTCAAGGATTGTTCCAATC+AGG - chr2.3:58027962-58027981 MS.gene55903:intron 45.0%
GTGACGTATTTCACGTTGGT+TGG - chr2.3:58026849-58026868 MS.gene55903:intron 45.0%
GTTCCAATCAGGATTCGAAC+GGG - chr2.3:58027973-58027992 MS.gene55903:intron 45.0%
GTTGGGAGGTAATTGAAGTC+TGG - chr2.3:58027941-58027960 MS.gene55903:intron 45.0%
TAACCCGTTCGAATCCTGAT+TGG + chr2.3:58027979-58027998 None:intergenic 45.0%
TGATTGGATCAGACCCTGAA+GGG - chr2.3:58028747-58028766 MS.gene55903:intron 45.0%
! ATGTTGGCACTGGAAAAGGT+AGG - chr2.3:58029683-58029702 MS.gene55903:intron 45.0%
! CAGTTTTCTGTCCATGAACC+TGG - chr2.3:58027311-58027330 MS.gene55903:intron 45.0%
! CTGGTAATCTGGAGTTTGGT+TGG - chr2.3:58027923-58027942 MS.gene55903:intron 45.0%
! GTTTTCTGTCCATGAACCTG+GGG - chr2.3:58027313-58027332 MS.gene55903:intron 45.0%
! TAATCTGGAGTTTGGTTGGG+AGG - chr2.3:58027927-58027946 MS.gene55903:intron 45.0%
!! CTTGTTGGTGTTGGAGTCTA+TGG - chr2.3:58028102-58028121 MS.gene55903:CDS 45.0%
!! GCATTCAGGTTGCATGGAAA+TGG - chr2.3:58029869-58029888 MS.gene55903:intron 45.0%
!! GGCTTTTCCATATGGGTTGA+TGG + chr2.3:58028357-58028376 None:intergenic 45.0%
!!! ACCCATGTTTTAGTGACAGG+CGG - chr2.3:58027338-58027357 MS.gene55903:intron 45.0%
!!! GTCACCCATGTTTTAGTGAC+AGG - chr2.3:58027335-58027354 MS.gene55903:intron 45.0%
AAGAGGAAGGGGAACCTTCT+CGG - chr2.3:58026982-58027001 MS.gene55903:intron 50.0%
AATTGAAGCCTTCCAGGCTG+TGG + chr2.3:58027578-58027597 None:intergenic 50.0%
ACAGGTGCGAAATCCAATCG+TGG - chr2.3:58028213-58028232 MS.gene55903:intron 50.0%
ACCATGGCACACCTCTTGTA+AGG + chr2.3:58028565-58028584 None:intergenic 50.0%
ACCGCCTAATGACGTAGATC+TGG + chr2.3:58026627-58026646 None:intergenic 50.0%
ACTAAAACATGGGTGACCCC+AGG + chr2.3:58027332-58027351 None:intergenic 50.0%
ACTCAAGATCCTCCTAGGTG+TGG - chr2.3:58026510-58026529 MS.gene55903:CDS 50.0%
AGAAGGTTCCCCTTCCTCTT+TGG + chr2.3:58026982-58027001 None:intergenic 50.0%
AGATCAGACGCGAACTGAAC+TGG - chr2.3:58029818-58029837 MS.gene55903:intron 50.0%
CACCGCCTGTCACTAAAACA+TGG + chr2.3:58027343-58027362 None:intergenic 50.0%
CCTCACCTAATCTCCCTTCA+GGG + chr2.3:58028763-58028782 None:intergenic 50.0%
CCTTAATCCTCCGGTTCTCA+AGG - chr2.3:58027890-58027909 MS.gene55903:intron 50.0%
CCTTGAGAACCGGAGGATTA+AGG + chr2.3:58027893-58027912 None:intergenic 50.0%
GCAGCCAGATCTACGTCATT+AGG - chr2.3:58026620-58026639 MS.gene55903:CDS 50.0%
GCCAGATCTACGTCATTAGG+CGG - chr2.3:58026623-58026642 MS.gene55903:CDS 50.0%
GCTTATTTCCACAGCCTGGA+AGG - chr2.3:58027567-58027586 MS.gene55903:intron 50.0%
GGCATCTACAATGTTGGCAC+TGG - chr2.3:58029673-58029692 MS.gene55903:intron 50.0%
GTGATTGGATCAGACCCTGA+AGG - chr2.3:58028746-58028765 MS.gene55903:intron 50.0%
GTTCGCGTCTGATCTTAGTC+GGG + chr2.3:58029813-58029832 None:intergenic 50.0%
GTTGCTACCTTGCAGGTTAC+AGG - chr2.3:58029541-58029560 MS.gene55903:intron 50.0%
TCACATCAAGGTCCACACCT+AGG + chr2.3:58026525-58026544 None:intergenic 50.0%
TCAGACCCTGAAGGGAGATT+AGG - chr2.3:58028755-58028774 MS.gene55903:intron 50.0%
TCTCGAATGCATGTTCCGTC+AGG + chr2.3:58029583-58029602 None:intergenic 50.0%
TGCATCTGTTGCTACCTTGC+AGG - chr2.3:58029534-58029553 MS.gene55903:intron 50.0%
TGGCAGAAAACTCGCCCTAA+TGG - chr2.3:58029889-58029908 MS.gene55903:intron 50.0%
! ACCTTACAAGAGGTGTGCCA+TGG - chr2.3:58028561-58028580 MS.gene55903:intron 50.0%
! GACCCTGGTAATCTGGAGTT+TGG - chr2.3:58027919-58027938 MS.gene55903:intron 50.0%
! GGTTATTACCGGACTAGGAG+TGG + chr2.3:58027076-58027095 None:intergenic 50.0%
! TGGAAATATGGGTGCCGTCA+GGG - chr2.3:58027535-58027554 MS.gene55903:intron 50.0%
ACAGGCGGTGCAGGCTATAT+CGG - chr2.3:58027353-58027372 MS.gene55903:intron 55.0%
AGACCTGAGCTTCGGGAACA+TGG - chr2.3:58028788-58028807 MS.gene55903:intron 55.0%
AGAGGAAGGGGAACCTTCTC+GGG - chr2.3:58026983-58027002 MS.gene55903:intron 55.0%
AGTCGGGTCGCTATACACCT+CGG + chr2.3:58029797-58029816 None:intergenic 55.0%
ATACACCTCGGCGTAATCGC+CGG + chr2.3:58029785-58029804 None:intergenic 55.0%
ATCCTCCGGTTCTCAAGGGA+AGG - chr2.3:58027895-58027914 MS.gene55903:intron 55.0%
CATCAAGGTCCACACCTAGG+AGG + chr2.3:58026522-58026541 None:intergenic 55.0%
CCCTGAAGGGAGATTAGGTG+AGG - chr2.3:58028760-58028779 MS.gene55903:intron 55.0%
CGGGAACATGGTCGAATCTC+AGG - chr2.3:58028800-58028819 MS.gene55903:intron 55.0%
GCCTCACCTAATCTCCCTTC+AGG + chr2.3:58028764-58028783 None:intergenic 55.0%
TCCTCCGGTTCTCAAGGGAA+GGG - chr2.3:58027896-58027915 MS.gene55903:intron 55.0%
TGTTCCCGAAGCTCAGGTCT+TGG + chr2.3:58028788-58028807 None:intergenic 55.0%
! CGGTCTTATGCCTGGCTTGA+AGG - chr2.3:58028844-58028863 MS.gene55903:CDS 55.0%
! GTGGAAATATGGGTGCCGTC+AGG - chr2.3:58027534-58027553 MS.gene55903:intron 55.0%
!! GTTTTAGTGACAGGCGGTGC+AGG - chr2.3:58027344-58027363 MS.gene55903:intron 55.0%
AGGCGCCAAGACCTGAGCTT+CGG - chr2.3:58028780-58028799 MS.gene55903:intron 60.0%
CATGGGTGACCCCAGGTTCA+TGG + chr2.3:58027325-58027344 None:intergenic 60.0%
CCTCCGGTTCTCAAGGGAAG+GGG - chr2.3:58027897-58027916 MS.gene55903:intron 60.0%
CGACCATGTTCCCGAAGCTC+AGG + chr2.3:58028794-58028813 None:intergenic 60.0%
GACGTAGATCTGGCTGCCCT+CGG + chr2.3:58026617-58026636 None:intergenic 60.0%
GCGTGCTTTGATGCAGCTCG+CGG - chr2.3:58028824-58028843 MS.gene55903:CDS 60.0%
GGAAGGGGACCCTGGTAATC+TGG - chr2.3:58027912-58027931 MS.gene55903:intron 60.0%
GGTCCCCTTCCCTTGAGAAC+CGG + chr2.3:58027903-58027922 None:intergenic 60.0%
TACACCTCGGCGTAATCGCC+GGG + chr2.3:58029784-58029803 None:intergenic 60.0%
TAGGGCCAGAAGTCAGCCGA+GGG - chr2.3:58026598-58026617 MS.gene55903:CDS 60.0%
TTCTCAAGGGAAGGGGACCC+TGG - chr2.3:58027904-58027923 MS.gene55903:intron 60.0%
CCCCTTCCCTTGAGAACCGG+AGG + chr2.3:58027900-58027919 None:intergenic 65.0%
CTAGGGCCAGAAGTCAGCCG+AGG - chr2.3:58026597-58026616 MS.gene55903:CDS 65.0%
GGCGCCAAGACCTGAGCTTC+GGG - chr2.3:58028781-58028800 MS.gene55903:intron 65.0%
! GCAGCTCGCGGTCTTATGCC+TGG - chr2.3:58028836-58028855 MS.gene55903:CDS 65.0%
CCTCGGCGTAATCGCCGGGT+CGG + chr2.3:58029780-58029799 None:intergenic 70.0%
CGTAATCGCCGGGTCGGCGT+GGG + chr2.3:58029774-58029793 None:intergenic 70.0%
GACTTCCTCCCACGCCGACC+CGG - chr2.3:58029763-58029782 MS.gene55903:CDS 70.0%
! GGCTGCCCTCGGCTGACTTC+TGG + chr2.3:58026606-58026625 None:intergenic 70.0%
AATCGCCGGGTCGGCGTGGG+AGG + chr2.3:58029771-58029790 None:intergenic 75.0%
CCGACCCGGCGATTACGCCG+AGG - chr2.3:58029777-58029796 MS.gene55903:CDS 75.0%
GCGTAATCGCCGGGTCGGCG+TGG + chr2.3:58029775-58029794 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 58026322 58029927 58026322 ID=MS.gene55903
chr2.3 mRNA 58026322 58029927 58026322 ID=MS.gene55903.t1;Parent=MS.gene55903
chr2.3 exon 58029893 58029927 58029893 ID=MS.gene55903.t1.exon1;Parent=MS.gene55903.t1
chr2.3 CDS 58029893 58029927 58029893 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58029723 58029803 58029723 ID=MS.gene55903.t1.exon2;Parent=MS.gene55903.t1
chr2.3 CDS 58029723 58029803 58029723 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58029605 58029648 58029605 ID=MS.gene55903.t1.exon3;Parent=MS.gene55903.t1
chr2.3 CDS 58029605 58029648 58029605 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58029163 58029287 58029163 ID=MS.gene55903.t1.exon4;Parent=MS.gene55903.t1
chr2.3 CDS 58029163 58029287 58029163 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58028822 58028935 58028822 ID=MS.gene55903.t1.exon5;Parent=MS.gene55903.t1
chr2.3 CDS 58028822 58028935 58028822 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58028621 58028728 58028621 ID=MS.gene55903.t1.exon6;Parent=MS.gene55903.t1
chr2.3 CDS 58028621 58028728 58028621 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58028424 58028515 58028424 ID=MS.gene55903.t1.exon7;Parent=MS.gene55903.t1
chr2.3 CDS 58028424 58028515 58028424 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58028033 58028174 58028033 ID=MS.gene55903.t1.exon8;Parent=MS.gene55903.t1
chr2.3 CDS 58028033 58028174 58028033 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58027805 58027899 58027805 ID=MS.gene55903.t1.exon9;Parent=MS.gene55903.t1
chr2.3 CDS 58027805 58027899 58027805 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58027384 58027513 58027384 ID=MS.gene55903.t1.exon10;Parent=MS.gene55903.t1
chr2.3 CDS 58027384 58027513 58027384 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
chr2.3 exon 58026322 58026693 58026322 ID=MS.gene55903.t1.exon11;Parent=MS.gene55903.t1
chr2.3 CDS 58026322 58026693 58026322 ID=cds.MS.gene55903.t1;Parent=MS.gene55903.t1
Gene Sequence

>MS.gene55903

ATGCCTTTTTCTCACACTTCACCAATAAAACTTTTGTAAAGAAAAGTGTTCTATTCTACCCTTGATTGACTCATCCATTTGTTTGTTTTTTGTTCTGCTGATTTTTCATTTTAAACTGCTTTAGGAATTTTTTCATCCAAGAGAAAAGAAAGAAAACTTACACGCTTTGTTTTCTGCTGCAGCATATCACTCAAGATCCTCCTAGGTGTGGACCTTGATGTGATCATTGATATTGGAGAATAAGTCCTTGTTGATTTTGCAAATGCTAAATTTTTCTAGGGCCAGAAGTCAGCCGAGGGCAGCCAGATCTACGTCATTAGGCGGTAAGTTATTCTGCCAAATTTAAGCACAAATGGTGGTTGACTAACTATCAGATTGTATTGAATGAATCTCGATGTGCTTAAAACATTAATCGATTTCATAATGATAATTTAGATGCGGTGTTTTCTAGCACTCAAGTATAGGATACCTTGTTACGCCAGTATATTGCATAAGGTGTTCATAAAATAATTAGTTGTCGAAATTCTGTGACGTATTTCACGTTGGTTGGTTGTTTTGTTATAATTAATAATTATTTATACTCATAATTATATTGAAGCTTTAAGATATTTTTGTTCTTACTTATGTTTCTTTCTTTTAGGTATGGATTATGTGGATCCAAAGAGGAAGGGGAACCTTCTCGGGAAAGTTTTTCTTGTTGCAGCATTAACAGCATTATGCATTTTGGTGATTAAGAGATCTCCATCTTTTACCACTCCTAGTCCGGTAATAACCTATAGATTATATTGACTAAAGTATGTAGTAATTGTGATGTTTTGATATATTAGTAATACATAAATATCAGAGTGAGACCTGGAAGAAATAGATATAAATCCTATTGACATGTGAATAAGTTTTTTATCAGCCGATTAATGCTTGATGGTTAGAGGAATAATTTTCAATTTTACCATTTTATTCAATTTATTGATTGATATCCTGCTTTTTTGGTCCAGTTTTCTGTCCATGAACCTGGGGTCACCCATGTTTTAGTGACAGGCGGTGCAGGCTATATCGGCTCACATGCTACCTTACGACTTCTGAAAGAATCTTATCGAGTTACCATAGTGGTATGTCTTTAAAATACTGAAAACTTCTCTCTGATAAAGGTAAATGCAAATGCATTGGACCAGTCTGTGCTAATCAAAATTTCTCTATTTCAGGATAATCTGTCACGTGGAAATATGGGTGCCGTCAGGGTTCTTCAAAGCTTATTTCCACAGCCTGGAAGGCTTCAATTTATACATGCTGACTTGGGAGATGCAAAATCTGTATCCTTGTTACAGAAAATAATTTGGTGTTACATTTTTACTTTGATTGAAGCGTATTTGTTAGTGAAATGCCCCAGAAAATTTGTTTTCTTGACTGGTTATTAGGTCGATAAAATATTTTCAGAGAATAAATTTGATGCTGTGATGCACTTTGCAGCTGTTGCATATGTGGGAGAAAGTACGCTTTACCCTCTTAAGTAAGTACTCGTAGCTTTCATTTGGGAACATTAATTCCAGTTGATAAAGTTGTATTTCTTTTGGCCTTAATCCTCCGGTTCTCAAGGGAAGGGGACCCTGGTAATCTGGAGTTTGGTTGGGAGGTAATTGAAGTCTGGTCAAGGATTGTTCCAATCAGGATTCGAACGGGTTAAATTTGTGTGCTAAACAAAATTAAATTTAATCCATTTCAGTTCTACTTTATTTATGTTCTGTAACTTGTTTGTCAGGTATTATCACAATATTACATCAAATACCTTGTTGGTGTTGGAGTCTATGGCTAAATATAATGTGAAGACATTCATTTATTCAAGTACATGTGCAACATATGGGGAACCTGAAAAGATGCCAATTACAGAAGAAACAGAACAGGTGCGAAATCCAATCGTGGTTTAGTTATTGTGTTTAGTCGATAACTCTTTTGTTTTTCGTTGCATCTTGGAACGACTTTAATGAACATCGGTGTGTAGTGTTTAATCATTGACATTATGTACTTGGATTTCAGAAACCCATCAACCCATATGGAAAAGCCAAGAAGATGGCAGAAGACATCATCCTTGATTTTTCAAAAAATTCCAAGATGGCAGTAATGATTCTAAGGTTTGTATTTTACATCAGCGCTTCAAATTTTCCCCATGTTTTTTGTAGTTCTTTCATGTCTTTTTCAATGTGCCCTTCGTTTAATGATTCTGAATATATCTTACACCTATAATGGAACCTTACAAGAGGTGTGCCATGGTTCAAAAGTCCAACACATTTTTGTTTTCATTTTTCTTTTCTTTGTGGTTTTAGCAAATAGATCTTTAACATAAAAAAACAGTTATTTTTACTTTATTTTTTAGAATCATTTTGGTTGTAATTATTGATAACTTTTCTTTGGGAAACATCCAGATATTTCAATGTGATTGGATCAGACCCTGAAGGGAGATTAGGTGAGGCGCCAAGACCTGAGCTTCGGGAACATGGTCGAATCTCAGGTGCGTGCTTTGATGCAGCTCGCGGTCTTATGCCTGGCTTGAAGGTATATCAATATTTTCATTTTTACTTTTTGCTAAAATGAAATTGTTTACATAGGTAATAAGTCAGAAAAACCAACCTGTTAGGAGATTAATTGTTGGAACAATATTTGATATATTTCCAAGATTACTGTGACAGAGAGCCCTAGTATATGCATTTTCCAGACTCACCAAACTAATGATAATCTTGATATTTCCTTGCATAGAATCTAGGATTAGTGTCAAGTTTAAACACTTGATATTTGGAGTAACATGCTTGTTTTTCTTGGAACTTAAATTCAATAGAACTTTTTAGTGTATAACCCTAAGTCCATATCTTAGGCCTAAGATATGGACTAACATGATCTTGGCACTTATCATAGGAGTGCTTATGTATGAACTATTTCTATAACAAAAGATAAAATTAAGTCAACCTGTTTCCATATATGCTATAAGCTGTTTTTATAAGCTATCCTTGAGAGCTTATGGACATGTCATAACCTGTTTCCATAAGCTTTTTCAATTTGTCTCACAGGCGCTTGTGCCAATAGATAAGCTCAAATAAGTCAATGCAACATGAATATGTTTTTTACTAGCTCTCGTGGAAAACGTGAAGTGATTTTTGCCCAAGTTACTTCAATTCTTGTATGTCTCTAGACTAATATGCCGCGATGTAAAATGAACCTATGCTCATTGCATCTGTTGCTACCTTGCAGGTTACAGGAACAGATTATAACACACCTGACGGAACATGCATTCGAGATTATATTGATGTTACTGATCTTGTTGATGCCCATGTCAAAGCTCTTGAAAAGGCAAAACCTGCTAAAGTAGGCATCTACAATGTTGGCACTGGAAAAGGTAGGTCAGTTAAGGAGTTTGTGAGTGCTTGTAAAAAGGCTACAGGTGTCGACATCAAAGTAGACTTCCTCCCACGCCGACCCGGCGATTACGCCGAGGTGTATAGCGACCCGACTAAGATCAGACGCGAACTGAACTGGACTGCGCAATACACTGACCTTGAAAAGAGCATTCAGGTTGCATGGAAATGGCAGAAAACTCGCCCTAATGGTTATGGAAGTTCCTAG
Protein sequence

>MS.gene55903.t1

MPFSHTSPIKLLNFFIQEKRKKTYTLCFLLQHITQDPPRARSQPRAARSTSLGGMDYVDPKRKGNLLGKVFLVAALTALCILVIKRSPSFTTPSPFSVHEPGVTHVLVTGGAGYIGSHATLRLLKESYRVTIVDNLSRGNMGAVRVLQSLFPQPGRLQFIHADLGDAKSVDKIFSENKFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLLVLESMAKYNVKTFIYSSTCATYGEPEKMPITEETEQKPINPYGKAKKMAEDIILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGLMPGLKVTGTDYNTPDGTCIRDYIDVTDLVDAHVKALEKAKPAKVGIYNVGTGKGRSVKEFVSACKKATGVDIKVDFLPRRPGDYAEVYSDPTKIRRELNWTAQYTDLEKSIQVAWKWQKTRPNGYGSS