AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069594

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069594.t1 MTR_8g099535 98.271 347 6 0 1 347 1 347 0.0 705
MS.gene069594.t1 MTR_5g009170 83.140 344 58 0 3 346 46 389 0.0 613
MS.gene069594.t1 MTR_5g009160 83.382 343 57 0 1 343 1 343 0.0 610
MS.gene069594.t1 MTR_5g009160 84.015 269 43 0 75 343 12 280 4.57e-174 485
MS.gene069594.t1 MTR_8g096880 67.347 343 110 2 2 342 4 346 4.57e-171 479
MS.gene069594.t1 MTR_4g134490 66.276 341 113 2 4 342 25 365 9.89e-168 472
MS.gene069594.t1 MTR_4g134490 65.130 347 113 3 4 342 25 371 3.94e-165 466
MS.gene069594.t1 MTR_8g096880 66.875 320 104 2 2 319 4 323 5.98e-154 435
MS.gene069594.t1 MTR_8g096880 66.667 291 95 2 2 290 4 294 6.53e-139 397
MS.gene069594.t1 MTR_5g009160 82.407 216 38 0 75 290 12 227 6.83e-133 378
MS.gene069594.t1 MTR_2g032100 41.926 353 179 7 6 345 73 412 4.37e-80 250
MS.gene069594.t1 MTR_8g089180 40.974 349 184 6 6 343 73 410 5.92e-78 245
MS.gene069594.t1 MTR_8g089180 40.974 349 184 6 6 343 73 410 5.92e-78 245
MS.gene069594.t1 MTR_2g032100 42.784 194 109 2 6 199 73 264 1.66e-45 157
MS.gene069594.t1 MTR_8g099285 96.296 54 2 0 235 288 3 56 5.23e-30 109
MS.gene069594.t1 MTR_4g102270 28.775 351 210 12 2 334 91 419 1.12e-24 104
MS.gene069594.t1 MTR_4g129820 28.371 356 220 13 5 345 96 431 3.94e-23 99.8
MS.gene069594.t1 MTR_0354s0040 28.829 333 197 11 5 319 83 393 4.34e-22 96.7
MS.gene069594.t1 MTR_3g084090 28.490 351 205 13 5 334 100 425 8.83e-22 96.3
MS.gene069594.t1 MTR_5g011940 28.012 332 199 12 5 318 91 400 1.70e-21 95.1
MS.gene069594.t1 MTR_1g009600 28.045 353 211 14 4 344 5 326 2.90e-21 95.5
MS.gene069594.t1 MTR_0034s0060 28.125 352 212 14 4 344 137 458 1.63e-20 93.2
MS.gene069594.t1 MTR_4g024600 27.879 330 204 12 5 319 102 412 2.37e-20 92.0
MS.gene069594.t1 MTR_2g073240 27.841 352 213 14 4 344 19 340 2.75e-20 92.4
MS.gene069594.t1 MTR_4g063600 28.399 331 197 14 2 326 30 326 3.95e-17 81.6
MS.gene069594.t1 MTR_4g063600 28.657 335 188 16 2 326 30 323 6.02e-17 81.3
MS.gene069594.t1 MTR_1g088480 28.308 325 181 16 6 321 120 401 2.63e-15 77.0
MS.gene069594.t1 MTR_2g096660 27.273 330 202 13 2 326 36 332 2.20e-14 73.6
MS.gene069594.t1 MTR_4g120030 27.327 333 190 16 3 326 110 399 2.15e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069594.t1 AT4G10960 81.268 347 65 0 1 347 1 347 0.0 590
MS.gene069594.t1 AT4G23920 80.357 336 66 0 4 339 3 338 0.0 568
MS.gene069594.t1 AT1G64440 78.824 340 72 0 6 345 5 344 0.0 568
MS.gene069594.t1 AT1G12780 66.862 341 111 2 4 342 7 347 3.20e-171 480
MS.gene069594.t1 AT1G63180 66.862 341 111 2 4 342 7 347 2.13e-170 478
MS.gene069594.t1 AT1G63180 65.854 287 96 2 4 288 7 293 1.68e-137 393
MS.gene069594.t1 AT1G30620 42.693 349 178 6 6 343 72 409 2.94e-82 256
MS.gene069594.t1 AT1G30620 42.693 349 178 6 6 343 73 410 3.37e-82 256
MS.gene069594.t1 AT1G30620 42.693 349 178 6 6 343 73 410 3.37e-82 256
MS.gene069594.t1 AT1G30620 42.693 349 178 6 6 343 73 410 3.37e-82 256
MS.gene069594.t1 AT1G30620 42.693 349 178 6 6 343 73 410 3.37e-82 256
MS.gene069594.t1 AT5G44480 41.954 348 180 6 6 342 73 409 4.81e-81 253
MS.gene069594.t1 AT5G44480 41.954 348 180 6 6 342 73 409 4.81e-81 253
MS.gene069594.t1 AT5G44480 41.954 348 180 6 6 342 73 409 4.81e-81 253
MS.gene069594.t1 AT5G44480 41.954 348 180 6 6 342 97 433 9.63e-81 253
MS.gene069594.t1 AT4G20460 41.643 353 180 7 6 345 72 411 1.44e-78 246
MS.gene069594.t1 AT1G30620 45.361 194 104 2 6 199 73 264 4.57e-50 169
MS.gene069594.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.63e-47 160
MS.gene069594.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.63e-47 160
MS.gene069594.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.63e-47 160
MS.gene069594.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.63e-47 160
MS.gene069594.t1 AT4G00110 29.129 333 196 12 5 319 92 402 6.46e-24 102
MS.gene069594.t1 AT1G02000 28.529 333 198 12 5 319 93 403 1.50e-22 98.2
MS.gene069594.t1 AT2G45310 27.879 330 204 12 5 319 98 408 4.51e-22 97.1
MS.gene069594.t1 AT1G53500 27.762 353 212 15 4 344 9 330 1.63e-21 96.3
MS.gene069594.t1 AT1G78570 27.635 351 215 12 4 344 7 328 5.03e-21 94.7
MS.gene069594.t1 AT3G23820 27.826 345 215 11 5 334 113 438 1.89e-20 92.4
MS.gene069594.t1 AT3G14790 26.648 349 221 11 4 344 7 328 7.62e-20 91.3
MS.gene069594.t1 AT3G14790 26.648 349 221 11 4 344 10 331 7.86e-20 91.3
MS.gene069594.t1 AT4G12250 27.035 344 219 11 5 334 97 422 4.16e-19 88.2
MS.gene069594.t1 AT4G30440 27.011 348 214 12 5 334 89 414 6.36e-19 87.8
MS.gene069594.t1 AT3G53520 26.409 337 205 13 6 333 122 424 9.90e-17 81.3
MS.gene069594.t1 AT3G53520 26.409 337 203 13 6 333 122 422 2.29e-15 77.0
MS.gene069594.t1 AT3G53520 25.641 351 195 17 6 326 122 436 6.31e-15 75.9
MS.gene069594.t1 AT5G59290 27.523 327 197 14 1 321 20 312 1.66e-14 73.9
MS.gene069594.t1 AT5G59290 27.778 324 196 13 3 321 29 319 1.86e-14 73.9
MS.gene069594.t1 AT5G59290 27.356 329 201 13 3 326 44 339 2.37e-14 73.6
MS.gene069594.t1 AT5G59290 27.640 322 193 14 6 321 3 290 5.38e-14 72.4
MS.gene069594.t1 AT2G47650 28.012 332 190 18 6 324 123 418 1.48e-13 71.6
MS.gene069594.t1 AT2G47650 27.356 329 190 17 6 324 123 412 2.52e-13 71.2
MS.gene069594.t1 AT3G62830 26.254 339 197 16 6 330 121 420 6.35e-13 69.7
MS.gene069594.t1 AT3G62830 26.254 339 197 16 6 330 121 420 6.35e-13 69.7
MS.gene069594.t1 AT3G53520 28.163 245 142 10 6 245 122 337 2.69e-12 67.4

Find 97 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAAATAGTACCTGTCTT+AGG 0.297516 4.4:+4787701 None:intergenic
TCCTCTTCAGCCACTGTATA+CGG 0.316611 4.4:-4788501 MS.gene069594:CDS
TATGTCAAACAAAACCATTC+TGG 0.318353 4.4:-4790402 MS.gene069594:CDS
TACTATGACAACAACTTGAT+TGG 0.327471 4.4:-4788831 MS.gene069594:CDS
TCAGTGCAGGGGACCTCCTT+TGG 0.348278 4.4:+4788474 None:intergenic
AAGCAGCAAAAGAACTTAAC+TGG 0.349651 4.4:-4786868 MS.gene069594:CDS
AGGAAAGGGAACATCAGTTT+TGG 0.357526 4.4:-4787489 MS.gene069594:CDS
TCCTTGTGCAGGGCTAAATA+TGG 0.358979 4.4:-4786642 MS.gene069594:intron
CTCCGATCAGCCTTTACAAT+TGG 0.364198 4.4:+4786929 None:intergenic
TACGGGCTTGCAGCTGATAA+AGG 0.374143 4.4:+4788444 None:intergenic
CGGTAACCTTTCCTTTCATA+AGG 0.388596 4.4:-4790237 MS.gene069594:intron
CAGATTCACCATAGCCATAA+GGG 0.392174 4.4:+4786574 None:intergenic
AACAAAACCATTCTGGTTAC+CGG 0.402604 4.4:-4790395 MS.gene069594:CDS
GAGGTTTATAACTTGGGAAC+AGG 0.410110 4.4:-4787509 MS.gene069594:CDS
CCACTAGGATGTGCACCAAC+GGG 0.426245 4.4:+4788173 None:intergenic
GATATCTACCGTTCTGATCC+AGG 0.432927 4.4:-4788227 MS.gene069594:CDS
TGTGCCGTGATCAATGGAAT+TGG 0.433769 4.4:-4786608 MS.gene069594:CDS
TCAGATTCACCATAGCCATA+AGG 0.446286 4.4:+4786573 None:intergenic
CATACCTTGGTTCGTCCATA+CGG 0.448422 4.4:+4788426 None:intergenic
CTTATGAAAGGAAAGGTTAC+CGG 0.450256 4.4:+4790238 None:intergenic
ACTGCAACTTGCTGAACAAA+AGG 0.454333 4.4:+4788107 None:intergenic
TTAGAAAATTCCAATTGTAA+AGG 0.455191 4.4:-4786939 MS.gene069594:intron
AAGTTACCTTCTTGCATCCA+TGG 0.460279 4.4:+4788778 None:intergenic
ACAAAAGGCATGAGGTTGTT+GGG 0.466227 4.4:+4788122 None:intergenic
ACTATGACAACAACTTGATT+GGG 0.468116 4.4:-4788830 MS.gene069594:CDS
GAAGAAGCTGGAGGACTGTA+TGG 0.470215 4.4:+4790351 None:intergenic
AGGTTGTGAGGTTTATAACT+TGG 0.472015 4.4:-4787516 MS.gene069594:CDS
ACAGTCCTCCAGCTTCTTCT+CGG 0.478199 4.4:-4790347 MS.gene069594:CDS
TATAACTTGGGAACAGGAAA+GGG 0.479391 4.4:-4787503 MS.gene069594:CDS
GCACATCCTAGTGGTCATAT+TGG 0.480170 4.4:-4788164 MS.gene069594:CDS
AACAAAAGGCATGAGGTTGT+TGG 0.482853 4.4:+4788121 None:intergenic
TATGGAACAAGTGATGGAAC+TGG 0.488752 4.4:-4788047 MS.gene069594:CDS
ATGATATGTGCCGTGATCAA+TGG 0.495661 4.4:-4786614 MS.gene069594:CDS
GCCGATGTAACCGGCTCCAC+CGG 0.496013 4.4:+4790376 None:intergenic
TTATCAGCTGCAAGCCCGTA+TGG 0.498617 4.4:-4788441 MS.gene069594:CDS
CACATTGCAGTTAGACCTGC+GGG 0.500648 4.4:-4789099 MS.gene069594:intron
TGTATGGCTGCCGATGTAAC+CGG 0.504067 4.4:+4790367 None:intergenic
TTATAACTTGGGAACAGGAA+AGG 0.505732 4.4:-4787504 MS.gene069594:CDS
GTAAAGGCTGATCGGAGACC+AGG 0.507007 4.4:-4786923 MS.gene069594:CDS
CATGTTGTTGATTTAGCTGA+TGG 0.509630 4.4:-4787755 MS.gene069594:CDS
TAAAGGAAACTCTTCAGTGC+AGG 0.517803 4.4:+4788461 None:intergenic
ATATTTGAGAAGAATTATCA+AGG 0.525846 4.4:+4790297 None:intergenic
GGTTGTGAGGTTTATAACTT+GGG 0.526110 4.4:-4787515 MS.gene069594:CDS
ATTCTGGTTACCGGTGGAGC+CGG 0.529625 4.4:-4790386 MS.gene069594:CDS
ACAGATTATGGAACAAGTGA+TGG 0.536376 4.4:-4788053 MS.gene069594:CDS
TGTAACCGCCGAGAAGAAGC+TGG 0.540964 4.4:+4790339 None:intergenic
ATACCTTGGTTCGTCCATAC+GGG 0.541410 4.4:+4788427 None:intergenic
GTGCCGTGATCAATGGAATT+GGG 0.542969 4.4:-4786607 MS.gene069594:CDS
CAAGTCCATCTCTGTCCCGC+AGG 0.543353 4.4:+4789084 None:intergenic
AAGGTTACCGGCGAAATCAC+CGG 0.545925 4.4:+4790250 None:intergenic
ACCACTAGGATGTGCACCAA+CGG 0.547577 4.4:+4788172 None:intergenic
AATTGTTCTACTTGAAGTCA+TGG 0.548419 4.4:-4788805 MS.gene069594:CDS
TTTGTTCAGCAAGTTGCAGT+TGG 0.550895 4.4:-4788104 MS.gene069594:CDS
ACCGGTGGAGCCGGTTACAT+CGG 0.553635 4.4:-4790377 MS.gene069594:CDS
CTTGAAGTCATGGCTGCCCA+TGG 0.554781 4.4:-4788795 MS.gene069594:CDS
TTCCAATTGTAAAGGCTGAT+CGG 0.556362 4.4:-4786931 MS.gene069594:CDS
GGCTCCACCGGTAACCAGAA+TGG 0.558207 4.4:+4790388 None:intergenic
CACTGTATACGGTTGGCCAA+AGG 0.562044 4.4:-4788490 MS.gene069594:CDS
TTAGACCTGCGGGACAGAGA+TGG 0.564284 4.4:-4789089 MS.gene069594:CDS
TAAACAACTTCAGCATCTCC+TGG 0.570331 4.4:+4786905 None:intergenic
AGTTACCTTCTTGCATCCAT+GGG 0.578547 4.4:+4788779 None:intergenic
ACCGTATACAGTGGCTGAAG+AGG 0.582934 4.4:+4788500 None:intergenic
CTTCAGCCACTGTATACGGT+TGG 0.587440 4.4:-4788497 MS.gene069594:CDS
AAAGGAAACTCTTCAGTGCA+GGG 0.590389 4.4:+4788462 None:intergenic
GGCTGCCCATGGATGCAAGA+AGG 0.591203 4.4:-4788784 MS.gene069594:intron
TTTGCTGGACTGAAAGCAGT+AGG 0.592924 4.4:-4788879 MS.gene069594:CDS
AAACTCGCCGGTGATTTCGC+CGG 0.593743 4.4:-4790257 MS.gene069594:CDS
CAACAACATGAATGTAATCA+CGG 0.594284 4.4:+4787768 None:intergenic
AAGCTAGATGATCCTAAGAC+AGG 0.595868 4.4:-4787713 MS.gene069594:intron
TTGTTGTCATAGTAGAGCAG+TGG 0.596053 4.4:+4788840 None:intergenic
TGTGCCGCGCACCTTATGAA+AGG 0.596057 4.4:+4790226 None:intergenic
GAGTTTCTTGACTCTGTCGA+TGG 0.600323 4.4:+4790274 None:intergenic
TTGAGATACTTCAACCCCGT+TGG 0.604257 4.4:-4788188 MS.gene069594:CDS
TGTATACGGTTGGCCAAAGG+AGG 0.615492 4.4:-4788487 MS.gene069594:CDS
TAGCCCAATTCCATTGATCA+CGG 0.615843 4.4:+4786604 None:intergenic
GTCCTCCAGCTTCTTCTCGG+CGG 0.617014 4.4:-4790344 MS.gene069594:CDS
GACAGAGTCAAGAAACTCGC+CGG 0.617460 4.4:-4790269 MS.gene069594:CDS
TCTACCGTTCTGATCCAGGA+TGG 0.618503 4.4:-4788223 MS.gene069594:CDS
ATGTTGTTGATTTAGCTGAT+GGG 0.626123 4.4:-4787754 MS.gene069594:CDS
TCCTAGTGGTCATATTGGTG+AGG 0.630469 4.4:-4788159 MS.gene069594:CDS
CGCGCACCTTATGAAAGGAA+AGG 0.634737 4.4:+4790231 None:intergenic
CCCGTTGGTGCACATCCTAG+TGG 0.638263 4.4:-4788173 MS.gene069594:CDS
TCAGTCTGTTACCTTTCGAG+AGG 0.639537 4.4:+4787442 None:intergenic
CGGTTACAAAGTCGTCGTGG+TGG 0.652707 4.4:-4790324 MS.gene069594:CDS
TGTTGCACATACAGGTTGTG+AGG 0.655389 4.4:-4787528 MS.gene069594:intron
TCCTCACCAATATGACCACT+AGG 0.658255 4.4:+4788158 None:intergenic
TCACATTGCAGTTAGACCTG+CGG 0.664949 4.4:-4789100 MS.gene069594:intron
AAGGAAACTCTTCAGTGCAG+GGG 0.668924 4.4:+4788463 None:intergenic
AAAACCATTCTGGTTACCGG+TGG 0.670384 4.4:-4790392 MS.gene069594:CDS
CTTGCTGAACAAAAGGCATG+AGG 0.677336 4.4:+4788114 None:intergenic
CTTTGGCCAACCGTATACAG+TGG 0.681860 4.4:+4788491 None:intergenic
CACTAGGATGTGCACCAACG+GGG 0.689749 4.4:+4788174 None:intergenic
AAGCCCGTATGGACGAACCA+AGG 0.710697 4.4:-4788430 MS.gene069594:intron
CGGCGGTTACAAAGTCGTCG+TGG 0.715510 4.4:-4790327 MS.gene069594:CDS
AACCGCCGAGAAGAAGCTGG+AGG 0.741411 4.4:+4790342 None:intergenic
CATATTGGTGAGGATCCTCG+CGG 0.752117 4.4:-4788149 MS.gene069594:CDS
AGGTTGTTGGGAATTCCGCG+AGG 0.771351 4.4:+4788134 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATGATTTTTTAAATATTA+TGG - chr4.4:4789766-4789785 MS.gene069594:intron 10.0%
!!! ATTTTTTGTAAATTTTTGTA+AGG - chr4.4:4787314-4787333 MS.gene069594:intron 10.0%
!!! GATGATTTTTTAAATATTAT+GGG - chr4.4:4789767-4789786 MS.gene069594:intron 10.0%
!! AAAACTTAAATAAGTGTTTA+TGG - chr4.4:4787248-4787267 MS.gene069594:intron 15.0%
!! AGAAGTAAAATAAAATATGT+CGG + chr4.4:4787847-4787866 None:intergenic 15.0%
!! GATATAATATTTGCAAAATT+TGG + chr4.4:4790237-4790256 None:intergenic 15.0%
!! TTAAAAAATCATCTATCTTA+GGG + chr4.4:4789760-4789779 None:intergenic 15.0%
!! TTAGTTAGTAAATAATGATT+TGG - chr4.4:4786824-4786843 MS.gene069594:intron 15.0%
!! TTTAAAAAATCATCTATCTT+AGG + chr4.4:4789761-4789780 None:intergenic 15.0%
!!! ATATTTAATAGTTTTTCACT+AGG - chr4.4:4787456-4787475 MS.gene069594:CDS 15.0%
!!! ATTTTATAAATGTCATTTGA+TGG - chr4.4:4789602-4789621 MS.gene069594:intron 15.0%
!!! TGTTTATTCAATTCTTTTTA+CGG - chr4.4:4790189-4790208 MS.gene069594:intron 15.0%
!!! TTTATTAGATTATTTTCAAG+TGG - chr4.4:4786948-4786967 MS.gene069594:intron 15.0%
!! AAAGAATTGAATAAACAGAA+AGG + chr4.4:4790186-4790205 None:intergenic 20.0%
!! AAATATAAACAAGATTGCAA+AGG + chr4.4:4788628-4788647 None:intergenic 20.0%
!! AATATAAACAAGATTGCAAA+GGG + chr4.4:4788627-4788646 None:intergenic 20.0%
!! AATGATTAAAAATGAGAGTA+AGG + chr4.4:4789585-4789604 None:intergenic 20.0%
!! ATATACTATCAATTTCACAT+AGG + chr4.4:4787800-4787819 None:intergenic 20.0%
!! ATATTTGAGAAGAATTATCA+AGG + chr4.4:4786673-4786692 None:intergenic 20.0%
!! ATGATTAAAAATGAGAGTAA+GGG + chr4.4:4789584-4789603 None:intergenic 20.0%
!! GAGAAATAAAGAATTGAAAA+TGG + chr4.4:4786783-4786802 None:intergenic 20.0%
!! TACAATATTTATGAACTTAG+AGG + chr4.4:4787653-4787672 None:intergenic 20.0%
!! TCATCATCACAATAAAATAA+CGG + chr4.4:4787824-4787843 None:intergenic 20.0%
!! TTAGAAAATTCCAATTGTAA+AGG - chr4.4:4790028-4790047 MS.gene069594:intron 20.0%
!! TTATTCACAATGAATTATAG+AGG + chr4.4:4787743-4787762 None:intergenic 20.0%
!!! GTTTTACAGTGTTTTTTATT+GGG - chr4.4:4786924-4786943 MS.gene069594:CDS 20.0%
!!! TGTTTTACAGTGTTTTTTAT+TGG - chr4.4:4786923-4786942 MS.gene069594:CDS 20.0%
!!! TTGCAATCTTGTTTATATTT+TGG - chr4.4:4788628-4788647 MS.gene069594:intron 20.0%
!!! TTTATTCAGTCTATTCATTT+TGG - chr4.4:4789311-4789330 MS.gene069594:intron 20.0%
! AAAGGGTAAAATTGAAAGAA+AGG - chr4.4:4786980-4786999 MS.gene069594:intron 25.0%
! AAAGGTAGATCTTAACAAAT+GGG + chr4.4:4789096-4789115 None:intergenic 25.0%
! AAATAATGTGAATAGTTTCC+TGG - chr4.4:4787762-4787781 MS.gene069594:CDS 25.0%
! AAATACAAAATCACCATGTT+CGG + chr4.4:4786889-4786908 None:intergenic 25.0%
! AACATAAATTTGTGAGGAAA+AGG + chr4.4:4790306-4790325 None:intergenic 25.0%
! ACATAAATTTGTGAGGAAAA+GGG + chr4.4:4790305-4790324 None:intergenic 25.0%
! ATATCTTCTAATCAGAAATG+TGG - chr4.4:4790252-4790271 MS.gene069594:CDS 25.0%
! ATATTATGGGATATCTAACA+AGG - chr4.4:4789780-4789799 MS.gene069594:intron 25.0%
! ATCAAAATAATCCAAATCGA+AGG + chr4.4:4789032-4789051 None:intergenic 25.0%
! GTTGTGTGTGAATAATAATT+GGG - chr4.4:4787049-4787068 MS.gene069594:intron 25.0%
! TAAGGGATAGCAAAATAAAA+AGG + chr4.4:4789567-4789586 None:intergenic 25.0%
! TATCTTCTAATCAGAAATGT+GGG - chr4.4:4790253-4790272 MS.gene069594:CDS 25.0%
! TATGACTAGAGAACTATTTA+GGG - chr4.4:4788560-4788579 MS.gene069594:intron 25.0%
! TCAAAATAATCCAAATCGAA+GGG + chr4.4:4789031-4789050 None:intergenic 25.0%
! TGTTGTGTGTGAATAATAAT+TGG - chr4.4:4787048-4787067 MS.gene069594:intron 25.0%
!! AAAACAACTCTCATTGATTA+TGG + chr4.4:4789382-4789401 None:intergenic 25.0%
!! AAACAACTCTCATTGATTAT+GGG + chr4.4:4789381-4789400 None:intergenic 25.0%
!! ATAAATCTTGTCTTTTTCTC+AGG - chr4.4:4789175-4789194 MS.gene069594:intron 25.0%
!! ATATTTTCTTCCACAAAGTA+AGG - chr4.4:4787911-4787930 MS.gene069594:intron 25.0%
!! ATTTTTACGTTCGATACTTT+TGG - chr4.4:4787559-4787578 MS.gene069594:intron 25.0%
!! TTAATAGTTTTTCACTAGGT+GGG - chr4.4:4787460-4787479 MS.gene069594:CDS 25.0%
!! TTACGGAAATTCAATGTTTT+TGG - chr4.4:4790206-4790225 MS.gene069594:intron 25.0%
!! TTCTTTCAATTTTACCCTTT+TGG + chr4.4:4786980-4786999 None:intergenic 25.0%
!! TTTAATAGTTTTTCACTAGG+TGG - chr4.4:4787459-4787478 MS.gene069594:CDS 25.0%
!!! AATGAGAGTTGTTTTTTCTT+TGG - chr4.4:4789387-4789406 MS.gene069594:intron 25.0%
!!! ATTTTTTATTTTGCCGAACA+TGG - chr4.4:4786873-4786892 MS.gene069594:CDS 25.0%
!!! CTCTTTGAAATCTTTTTAAG+AGG + chr4.4:4787609-4787628 None:intergenic 25.0%
!!! CTTTAAGTTGATATAGCATA+AGG - chr4.4:4789628-4789647 MS.gene069594:intron 25.0%
!!! GATTTACTGAAATTTTGACT+TGG - chr4.4:4788968-4788987 MS.gene069594:intron 25.0%
AAAGCATGTTATGTACTTGT+CGG + chr4.4:4787099-4787118 None:intergenic 30.0%
AAATTTATGTTCCTTGTGCA+GGG - chr4.4:4790315-4790334 MS.gene069594:CDS 30.0%
AATTGTTCTACTTGAAGTCA+TGG - chr4.4:4788162-4788181 MS.gene069594:CDS 30.0%
ACAAGGAACATAAATTTGTG+AGG + chr4.4:4790312-4790331 None:intergenic 30.0%
ACTATGACAACAACTTGATT+GGG - chr4.4:4788137-4788156 MS.gene069594:CDS 30.0%
AGATCCTCAAAAGAATTCAA+AGG + chr4.4:4789114-4789133 None:intergenic 30.0%
ATGAATTATAGAGGAATGGA+AGG + chr4.4:4787734-4787753 None:intergenic 30.0%
CAAAGGTAGATCTTAACAAA+TGG + chr4.4:4789097-4789116 None:intergenic 30.0%
CAACAACATGAATGTAATCA+CGG + chr4.4:4789202-4789221 None:intergenic 30.0%
CACAATGAATTATAGAGGAA+TGG + chr4.4:4787738-4787757 None:intergenic 30.0%
CATAAATTTGTGAGGAAAAG+GGG + chr4.4:4790304-4790323 None:intergenic 30.0%
GTATGACTAGAGAACTATTT+AGG - chr4.4:4788559-4788578 MS.gene069594:intron 30.0%
TAAGATCCTCAAAAGCTTAT+CGG + chr4.4:4789151-4789170 None:intergenic 30.0%
TACTATGACAACAACTTGAT+TGG - chr4.4:4788136-4788155 MS.gene069594:CDS 30.0%
TTAAGGTAGCAGTATTATCA+GGG + chr4.4:4788367-4788386 None:intergenic 30.0%
TTCTTCAATGTATAGCTGAA+AGG + chr4.4:4788711-4788730 None:intergenic 30.0%
TTTACTTACAACTCACGTAA+TGG + chr4.4:4789715-4789734 None:intergenic 30.0%
TTTCAAATAGTACCTGTCTT+AGG + chr4.4:4789269-4789288 None:intergenic 30.0%
TTTGTCAATATGTTCAGCTA+TGG + chr4.4:4789934-4789953 None:intergenic 30.0%
! CATAGGTAACATATTTTTCC+AGG + chr4.4:4787783-4787802 None:intergenic 30.0%
! GAACTATTTAGGGTACTTAT+CGG - chr4.4:4788570-4788589 MS.gene069594:intron 30.0%
! TCTACCTTTGAATTCTTTTG+AGG - chr4.4:4789107-4789126 MS.gene069594:intron 30.0%
! TTCAATTTTACCCTTTTGGT+TGG + chr4.4:4786976-4786995 None:intergenic 30.0%
! TTTAAGGTAGCAGTATTATC+AGG + chr4.4:4788368-4788387 None:intergenic 30.0%
!! ATGTTGTTGATTTAGCTGAT+GGG - chr4.4:4789213-4789232 MS.gene069594:intron 30.0%
!! ATTGATTTTGTCATCCGAAA+AGG - chr4.4:4787680-4787699 MS.gene069594:intron 30.0%
!! GAAAGAAAGGTATTATTCCT+GGG - chr4.4:4786993-4787012 MS.gene069594:intron 30.0%
!! TCAATTTTACCCTTTTGGTT+GGG + chr4.4:4786975-4786994 None:intergenic 30.0%
!! TGAAAGAAAGGTATTATTCC+TGG - chr4.4:4786992-4787011 MS.gene069594:intron 30.0%
!!! ACAGTTTTTGGAACAGATTA+TGG - chr4.4:4788902-4788921 MS.gene069594:intron 30.0%
!!! TTTTTTCCGATAAGCTTTTG+AGG - chr4.4:4789142-4789161 MS.gene069594:intron 30.0%
!!! TTTTTTCTTTGGTGCGTTTT+TGG - chr4.4:4789398-4789417 MS.gene069594:intron 30.0%
AACTCTCGTTAGATTCTGAT+AGG + chr4.4:4788680-4788699 None:intergenic 35.0%
AACTTAACTGGAAGTAAGTG+TGG - chr4.4:4790111-4790130 MS.gene069594:intron 35.0%
AAGCAGCAAAAGAACTTAAC+TGG - chr4.4:4790099-4790118 MS.gene069594:intron 35.0%
AAGCATGTTATGTACTTGTC+GGG + chr4.4:4787098-4787117 None:intergenic 35.0%
ACAGATTATGGAACAAGTGA+TGG - chr4.4:4788914-4788933 MS.gene069594:intron 35.0%
AGGTTGTGAGGTTTATAACT+TGG - chr4.4:4789451-4789470 MS.gene069594:intron 35.0%
ATAGACTGAGTACTTGTAGT+GGG - chr4.4:4788266-4788285 MS.gene069594:intron 35.0%
ATAGTTCTCTAGTCATACCT+TGG + chr4.4:4788557-4788576 None:intergenic 35.0%
ATCACCAAAAAAAGCCAGAT+TGG + chr4.4:4787163-4787182 None:intergenic 35.0%
ATGACAGCATCAAATCTGAA+AGG + chr4.4:4788064-4788083 None:intergenic 35.0%
CAAATTTATGTTCCTTGTGC+AGG - chr4.4:4790314-4790333 MS.gene069594:CDS 35.0%
CAATCTCACAAGACACTTTA+AGG + chr4.4:4788384-4788403 None:intergenic 35.0%
CTTATGAAAGGAAAGGTTAC+CGG + chr4.4:4786732-4786751 None:intergenic 35.0%
GATAATAATGCTGTCACAGT+TGG - chr4.4:4789049-4789068 MS.gene069594:intron 35.0%
GGTTGTGAGGTTTATAACTT+GGG - chr4.4:4789452-4789471 MS.gene069594:intron 35.0%
GTTGATATAGCATAAGGACT+TGG - chr4.4:4789634-4789653 MS.gene069594:intron 35.0%
TAAAAGCCCCAATCTTCTAT+CGG + chr4.4:4787532-4787551 None:intergenic 35.0%
TATAACTTGGGAACAGGAAA+GGG - chr4.4:4789464-4789483 MS.gene069594:intron 35.0%
TATAGACTGAGTACTTGTAG+TGG - chr4.4:4788265-4788284 MS.gene069594:intron 35.0%
TATGCACAATCCTTACTTTG+TGG + chr4.4:4787924-4787943 None:intergenic 35.0%
TTATAACTTGGGAACAGGAA+AGG - chr4.4:4789463-4789482 MS.gene069594:intron 35.0%
TTATGTGATGTTGCACATAC+AGG - chr4.4:4789431-4789450 MS.gene069594:intron 35.0%
TTCCAATTGTAAAGGCTGAT+CGG - chr4.4:4790036-4790055 MS.gene069594:intron 35.0%
TTTAAGTCCTGAATCTTGCA+GGG - chr4.4:4788221-4788240 MS.gene069594:CDS 35.0%
! AACAAAACCATTCTGGTTAC+CGG - chr4.4:4786572-4786591 MS.gene069594:CDS 35.0%
! CTTAAAGTGTCTTGTGAGAT+TGG - chr4.4:4788382-4788401 MS.gene069594:intron 35.0%
!! ATTGTGCCACTAATCCTTTT+CGG + chr4.4:4787697-4787716 None:intergenic 35.0%
!! CATGTTGTTGATTTAGCTGA+TGG - chr4.4:4789212-4789231 MS.gene069594:intron 35.0%
!!! AACAGTGTTATTTTCCATCC+TGG + chr4.4:4788761-4788780 None:intergenic 35.0%
!!! AGATCCAATCTGGCTTTTTT+TGG - chr4.4:4787156-4787175 MS.gene069594:intron 35.0%
AAAGGAAACTCTTCAGTGCA+GGG + chr4.4:4788508-4788527 None:intergenic 40.0%
AAGCTAGATGATCCTAAGAC+AGG - chr4.4:4789254-4789273 MS.gene069594:intron 40.0%
AAGTTACCTTCTTGCATCCA+TGG + chr4.4:4788192-4788211 None:intergenic 40.0%
ACAACATGTGCAAAATGCGT+CGG - chr4.4:4789867-4789886 MS.gene069594:intron 40.0%
ACAAGGGAAACTTGTATGTG+TGG - chr4.4:4787484-4787503 MS.gene069594:CDS 40.0%
ACTTATCGGATACTTGGGTA+GGG - chr4.4:4788584-4788603 MS.gene069594:intron 40.0%
AGCAAAAACCCTTATGGCTA+TGG - chr4.4:4790385-4790404 MS.gene069594:CDS 40.0%
AGCTGAGTCTGTTTCACAAT+TGG - chr4.4:4787072-4787091 MS.gene069594:intron 40.0%
AGTACTCAGTCTATATGACC+CGG + chr4.4:4788260-4788279 None:intergenic 40.0%
AGTTACCTTCTTGCATCCAT+GGG + chr4.4:4788191-4788210 None:intergenic 40.0%
ATAGAGGAATGGAAGGCAAA+CGG + chr4.4:4787727-4787746 None:intergenic 40.0%
ATGATATGTGCCGTGATCAA+TGG - chr4.4:4790353-4790372 MS.gene069594:CDS 40.0%
CAATGGTTGTGAACTGATGT+TGG - chr4.4:4789352-4789371 MS.gene069594:intron 40.0%
CAGATTCACCATAGCCATAA+GGG + chr4.4:4790396-4790415 None:intergenic 40.0%
CGGTAACCTTTCCTTTCATA+AGG - chr4.4:4786730-4786749 MS.gene069594:intron 40.0%
CGTTACTACTAGATCCAATC+TGG - chr4.4:4787146-4787165 MS.gene069594:intron 40.0%
CTTTAAGTCCTGAATCTTGC+AGG - chr4.4:4788220-4788239 MS.gene069594:CDS 40.0%
GAGGTTTATAACTTGGGAAC+AGG - chr4.4:4789458-4789477 MS.gene069594:intron 40.0%
GGGAATTACGCATGTAAGAA+TGG + chr4.4:4789076-4789095 None:intergenic 40.0%
TAAACAACTTCAGCATCTCC+TGG + chr4.4:4790065-4790084 None:intergenic 40.0%
TAAAGGAAACTCTTCAGTGC+AGG + chr4.4:4788509-4788528 None:intergenic 40.0%
TACTTATCGGATACTTGGGT+AGG - chr4.4:4788583-4788602 MS.gene069594:intron 40.0%
TAGCCCAATTCCATTGATCA+CGG + chr4.4:4790366-4790385 None:intergenic 40.0%
TCAGATTCACCATAGCCATA+AGG + chr4.4:4790397-4790416 None:intergenic 40.0%
TCCAAATCGAAGGGAAATAG+TGG + chr4.4:4789022-4789041 None:intergenic 40.0%
TCCACTATTTCCCTTCGATT+TGG - chr4.4:4789018-4789037 MS.gene069594:intron 40.0%
TGTCATCCGAAAAGGATTAG+TGG - chr4.4:4787688-4787707 MS.gene069594:intron 40.0%
TTAAGTCCTGAATCTTGCAG+GGG - chr4.4:4788222-4788241 MS.gene069594:CDS 40.0%
TTGTTGTCATAGTAGAGCAG+TGG + chr4.4:4788130-4788149 None:intergenic 40.0%
TTTAAGAGGTTATCGACCTC+TGG + chr4.4:4787595-4787614 None:intergenic 40.0%
TTTGTTCAGCAAGTTGCAGT+TGG - chr4.4:4788863-4788882 MS.gene069594:CDS 40.0%
! AACAAAAGGCATGAGGTTGT+TGG + chr4.4:4788849-4788868 None:intergenic 40.0%
! ACAAAAGGCATGAGGTTGTT+GGG + chr4.4:4788848-4788867 None:intergenic 40.0%
! AGGAAAGGGAACATCAGTTT+TGG - chr4.4:4789478-4789497 MS.gene069594:intron 40.0%
! AGGGTACTTATCGGATACTT+GGG - chr4.4:4788579-4788598 MS.gene069594:intron 40.0%
! GATGCTGTCATACATTTTGC+TGG - chr4.4:4788073-4788092 MS.gene069594:CDS 40.0%
! GATGGTTACAGCTTTTGAAC+AGG - chr4.4:4789502-4789521 MS.gene069594:intron 40.0%
! TAGGGTACTTATCGGATACT+TGG - chr4.4:4788578-4788597 MS.gene069594:intron 40.0%
! TATGGAACAAGTGATGGAAC+TGG - chr4.4:4788920-4788939 MS.gene069594:intron 40.0%
! TTTTCACTAGGTGGGTACAA+GGG - chr4.4:4787468-4787487 MS.gene069594:CDS 40.0%
! TTTTCCATCCTGGATCAGAA+CGG + chr4.4:4788751-4788770 None:intergenic 40.0%
! TTTTTCACTAGGTGGGTACA+AGG - chr4.4:4787467-4787486 MS.gene069594:CDS 40.0%
!! ACTGCAACTTGCTGAACAAA+AGG + chr4.4:4788863-4788882 None:intergenic 40.0%
AAGGAAACTCTTCAGTGCAG+GGG + chr4.4:4788507-4788526 None:intergenic 45.0%
AGACTCCTTGACAGTAGCAA+TGG - chr4.4:4789335-4789354 MS.gene069594:intron 45.0%
ATCTTGCAGGGGAAGAATGT+CGG - chr4.4:4788233-4788252 MS.gene069594:CDS 45.0%
ATTCTTCCCCTGCAAGATTC+AGG + chr4.4:4788231-4788250 None:intergenic 45.0%
CACAACCATTGCTACTGTCA+AGG + chr4.4:4789343-4789362 None:intergenic 45.0%
CCCAATCTTCTATCGGACAA+GGG + chr4.4:4787525-4787544 None:intergenic 45.0%
CCCTTGTCCGATAGAAGATT+GGG - chr4.4:4787522-4787541 MS.gene069594:intron 45.0%
CCTTGTCCGATAGAAGATTG+GGG - chr4.4:4787523-4787542 MS.gene069594:intron 45.0%
CTCCGATCAGCCTTTACAAT+TGG + chr4.4:4790041-4790060 None:intergenic 45.0%
CTTGTATGTGTGGACATGAC+TGG - chr4.4:4787494-4787513 MS.gene069594:CDS 45.0%
CTTTCCTTTCATAAGGTGCG+CGG - chr4.4:4786737-4786756 MS.gene069594:intron 45.0%
GAGTTTCTTGACTCTGTCGA+TGG + chr4.4:4786696-4786715 None:intergenic 45.0%
GATATCTACCGTTCTGATCC+AGG - chr4.4:4788740-4788759 MS.gene069594:intron 45.0%
GCACATCCTAGTGGTCATAT+TGG - chr4.4:4788803-4788822 MS.gene069594:CDS 45.0%
GGTATTATTCCTGGGAGAGA+CGG - chr4.4:4787001-4787020 MS.gene069594:intron 45.0%
GTGCCGTGATCAATGGAATT+GGG - chr4.4:4790360-4790379 MS.gene069594:CDS 45.0%
TCAAGTGGACCCAACCAAAA+GGG - chr4.4:4786963-4786982 MS.gene069594:intron 45.0%
TCACATTGCAGTTAGACCTG+CGG - chr4.4:4787867-4787886 MS.gene069594:intron 45.0%
TCAGTCTGTTACCTTTCGAG+AGG + chr4.4:4789528-4789547 None:intergenic 45.0%
TCCCTTGTCCGATAGAAGAT+TGG - chr4.4:4787521-4787540 MS.gene069594:intron 45.0%
TCCTAGTGGTCATATTGGTG+AGG - chr4.4:4788808-4788827 MS.gene069594:CDS 45.0%
TCCTCACCAATATGACCACT+AGG + chr4.4:4788812-4788831 None:intergenic 45.0%
TCCTCTTCAGCCACTGTATA+CGG - chr4.4:4788466-4788485 MS.gene069594:CDS 45.0%
TCCTTGTGCAGGGCTAAATA+TGG - chr4.4:4790325-4790344 MS.gene069594:CDS 45.0%
TGTGCCGTGATCAATGGAAT+TGG - chr4.4:4790359-4790378 MS.gene069594:CDS 45.0%
TGTTGCACATACAGGTTGTG+AGG - chr4.4:4789439-4789458 MS.gene069594:intron 45.0%
TTCAAGTGGACCCAACCAAA+AGG - chr4.4:4786962-4786981 MS.gene069594:intron 45.0%
TTGAGATACTTCAACCCCGT+TGG - chr4.4:4788779-4788798 MS.gene069594:intron 45.0%
TTTGCTGGACTGAAAGCAGT+AGG - chr4.4:4788088-4788107 MS.gene069594:CDS 45.0%
! AAAACCATTCTGGTTACCGG+TGG - chr4.4:4786575-4786594 MS.gene069594:CDS 45.0%
! ATACCTTGGTTCGTCCATAC+GGG + chr4.4:4788543-4788562 None:intergenic 45.0%
! CATACCTTGGTTCGTCCATA+CGG + chr4.4:4788544-4788563 None:intergenic 45.0%
! CTTGCTGAACAAAAGGCATG+AGG + chr4.4:4788856-4788875 None:intergenic 45.0%
! TTTTGAACAGGCCTCTCGAA+AGG - chr4.4:4789514-4789533 MS.gene069594:intron 45.0%
!! CGCTCTGCATTGACAGTTTT+TGG - chr4.4:4788890-4788909 MS.gene069594:CDS 45.0%
!! TGGGCTAGCAAAAACCCTTA+TGG - chr4.4:4790379-4790398 MS.gene069594:CDS 45.0%
!!! GGGAACATCAGTTTTGGAGA+TGG - chr4.4:4789484-4789503 MS.gene069594:intron 45.0%
!!! TTTTGGTTTCCTAGCACCAG+AGG - chr4.4:4787576-4787595 MS.gene069594:intron 45.0%
!!! AATATATTTTTTATTCAATA+AGG + chr4.4:4787441-4787460 None:intergenic 5.0%
AAGGTTACCGGCGAAATCAC+CGG + chr4.4:4786720-4786739 None:intergenic 50.0%
ACAGTCCTCCAGCTTCTTCT+CGG - chr4.4:4786620-4786639 MS.gene069594:CDS 50.0%
ACCACTAGGATGTGCACCAA+CGG + chr4.4:4788798-4788817 None:intergenic 50.0%
ACCGTATACAGTGGCTGAAG+AGG + chr4.4:4788470-4788489 None:intergenic 50.0%
ATTATTCCTGGGAGAGACGG+TGG - chr4.4:4787004-4787023 MS.gene069594:intron 50.0%
CACATTGCAGTTAGACCTGC+GGG - chr4.4:4787868-4787887 MS.gene069594:intron 50.0%
CATATTGGTGAGGATCCTCG+CGG - chr4.4:4788818-4788837 MS.gene069594:CDS 50.0%
CCCCAATCTTCTATCGGACA+AGG + chr4.4:4787526-4787545 None:intergenic 50.0%
CGCGCACCTTATGAAAGGAA+AGG + chr4.4:4786739-4786758 None:intergenic 50.0%
CTTCAGCCACTGTATACGGT+TGG - chr4.4:4788470-4788489 MS.gene069594:CDS 50.0%
CTTTGGCCAACCGTATACAG+TGG + chr4.4:4788479-4788498 None:intergenic 50.0%
GAAGAAGCTGGAGGACTGTA+TGG + chr4.4:4786619-4786638 None:intergenic 50.0%
GACAGAGTCAAGAAACTCGC+CGG - chr4.4:4786698-4786717 MS.gene069594:intron 50.0%
GCCATATTTAGCCCTGCACA+AGG + chr4.4:4790329-4790348 None:intergenic 50.0%
TACGGGCTTGCAGCTGATAA+AGG + chr4.4:4788526-4788545 None:intergenic 50.0%
TCTACCGTTCTGATCCAGGA+TGG - chr4.4:4788744-4788763 MS.gene069594:intron 50.0%
TCTTGCAGGGGAAGAATGTC+GGG - chr4.4:4788234-4788253 MS.gene069594:CDS 50.0%
TGTATGGCTGCCGATGTAAC+CGG + chr4.4:4786603-4786622 None:intergenic 50.0%
TTATCAGCTGCAAGCCCGTA+TGG - chr4.4:4788526-4788545 MS.gene069594:intron 50.0%
! CACTGTATACGGTTGGCCAA+AGG - chr4.4:4788477-4788496 MS.gene069594:CDS 50.0%
! TGTATACGGTTGGCCAAAGG+AGG - chr4.4:4788480-4788499 MS.gene069594:CDS 50.0%
AAACTCGCCGGTGATTTCGC+CGG - chr4.4:4786710-4786729 MS.gene069594:intron 55.0%
AAGCCCGTATGGACGAACCA+AGG - chr4.4:4788537-4788556 MS.gene069594:intron 55.0%
AGGTTGTTGGGAATTCCGCG+AGG + chr4.4:4788836-4788855 None:intergenic 55.0%
CACTAGGATGTGCACCAACG+GGG + chr4.4:4788796-4788815 None:intergenic 55.0%
CCACTAGGATGTGCACCAAC+GGG + chr4.4:4788797-4788816 None:intergenic 55.0%
CGGTTACAAAGTCGTCGTGG+TGG - chr4.4:4786643-4786662 MS.gene069594:intron 55.0%
CTTGAAGTCATGGCTGCCCA+TGG - chr4.4:4788172-4788191 MS.gene069594:CDS 55.0%
GGTTATCGACCTCTGGTGCT+AGG + chr4.4:4787588-4787607 None:intergenic 55.0%
GTAAAGGCTGATCGGAGACC+AGG - chr4.4:4790044-4790063 MS.gene069594:intron 55.0%
TGTAACCGCCGAGAAGAAGC+TGG + chr4.4:4786631-4786650 None:intergenic 55.0%
TGTGCCGCGCACCTTATGAA+AGG + chr4.4:4786744-4786763 None:intergenic 55.0%
TTAGACCTGCGGGACAGAGA+TGG - chr4.4:4787878-4787897 MS.gene069594:intron 55.0%
! ATTCTGGTTACCGGTGGAGC+CGG - chr4.4:4786581-4786600 MS.gene069594:CDS 55.0%
AACCGCCGAGAAGAAGCTGG+AGG + chr4.4:4786628-4786647 None:intergenic 60.0%
AATCTGCCACCGTCTCTCCC+AGG + chr4.4:4787013-4787032 None:intergenic 60.0%
ACCGGTGGAGCCGGTTACAT+CGG - chr4.4:4786590-4786609 MS.gene069594:CDS 60.0%
CAAGTCCATCTCTGTCCCGC+AGG + chr4.4:4787886-4787905 None:intergenic 60.0%
CCCGTTGGTGCACATCCTAG+TGG - chr4.4:4788794-4788813 MS.gene069594:CDS 60.0%
CGGCGGTTACAAAGTCGTCG+TGG - chr4.4:4786640-4786659 MS.gene069594:intron 60.0%
GGCTCCACCGGTAACCAGAA+TGG + chr4.4:4786582-4786601 None:intergenic 60.0%
GGCTGCCCATGGATGCAAGA+AGG - chr4.4:4788183-4788202 MS.gene069594:CDS 60.0%
GTCCTCCAGCTTCTTCTCGG+CGG - chr4.4:4786623-4786642 MS.gene069594:CDS 60.0%
TCAGTGCAGGGGACCTCCTT+TGG + chr4.4:4788496-4788515 None:intergenic 60.0%
CAGGGGAAGAATGTCGGGCC+GGG - chr4.4:4788239-4788258 MS.gene069594:CDS 65.0%
GCAGGGGAAGAATGTCGGGC+CGG - chr4.4:4788238-4788257 MS.gene069594:CDS 65.0%
! GCCGATGTAACCGGCTCCAC+CGG + chr4.4:4786594-4786613 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 4786566 4790423 4786566 ID=MS.gene069594
chr4.4 mRNA 4786566 4790423 4786566 ID=MS.gene069594.t1;Parent=MS.gene069594
chr4.4 exon 4790238 4790423 4790238 ID=MS.gene069594.t1.exon1;Parent=MS.gene069594.t1
chr4.4 CDS 4790238 4790423 4790238 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4789062 4789111 4789062 ID=MS.gene069594.t1.exon2;Parent=MS.gene069594.t1
chr4.4 CDS 4789062 4789111 4789062 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4788785 4788920 4788785 ID=MS.gene069594.t1.exon3;Parent=MS.gene069594.t1
chr4.4 CDS 4788785 4788920 4788785 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4788431 4788532 4788431 ID=MS.gene069594.t1.exon4;Parent=MS.gene069594.t1
chr4.4 CDS 4788431 4788532 4788431 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4788046 4788273 4788046 ID=MS.gene069594.t1.exon5;Parent=MS.gene069594.t1
chr4.4 CDS 4788046 4788273 4788046 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4787714 4787792 4787714 ID=MS.gene069594.t1.exon6;Parent=MS.gene069594.t1
chr4.4 CDS 4787714 4787792 4787714 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4787454 4787536 4787454 ID=MS.gene069594.t1.exon7;Parent=MS.gene069594.t1
chr4.4 CDS 4787454 4787536 4787454 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4786866 4786957 4786866 ID=MS.gene069594.t1.exon8;Parent=MS.gene069594.t1
chr4.4 CDS 4786866 4786957 4786866 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
chr4.4 exon 4786566 4786653 4786566 ID=MS.gene069594.t1.exon9;Parent=MS.gene069594.t1
chr4.4 CDS 4786566 4786653 4786566 ID=cds.MS.gene069594.t1;Parent=MS.gene069594.t1
Gene Sequence

>MS.gene069594

ATGTCAAACAAAACCATTCTGGTTACCGGTGGAGCCGGTTACATCGGCAGCCATACAGTCCTCCAGCTTCTTCTCGGCGGTTACAAAGTCGTCGTGGTGGATAACCTTGATAATTCTTCTCAAATATCCATCGACAGAGTCAAGAAACTCGCCGGTGATTTCGCCGGTAACCTTTCCTTTCATAAGGTGCGCGGCACATTCTCTCGTTGCTCTACCATTTTCAATTCTTTATTTCTCTCTCTGTCTGTTTTTAATTAATTAGTTAGTAAATAATGATTTGGTTGTACTGTCTTTATATTTGATAATTATTTTTTATTTTGCCGAACATGGTGATTTTGTATTTAAAAAAAAATAAATTGTTTTACAGTGTTTTTTATTGGGTTTTATTAGATTATTTTCAAGTGGACCCAACCAAAAGGGTAAAATTGAAAGAAAGGTATTATTCCTGGGAGAGACGGTGGCAGATTCGAATAATATGTGTGTGTTGTGTGTGAATAATAATTGGGAGCTGAGTCTGTTTCACAATTGGCCCGACAAGTACATAACATGCTTTTTGATGTGATGTTTGTTTTGTTTATTTCGTTACTACTAGATCCAATCTGGCTTTTTTTGGTGATATTGCAATTTTGTTGAAATTCTAAACTGTACTGTAGTTTTCAAAGTGAATTTGAAAAAAAAAAAAAAAACTTAAATAAGTGTTTATGGAATAAATAAATAATTATTGTATTATTCAAAATGTATTTGAATCATTTTTTGTAAATTTTTGTAAGGAGTTGAAAAAAATAGCTTATTTTTTGACGTTTCATAAAAATAGCTGAAAACAACATATAAATTACAATATTAGCTGCAATAGACATTGATAAAGTATTTCACCTTATTGAATAAAAAATATATTTAATAGTTTTTCACTAGGTGGGTACAAGGGAAACTTGTATGTGTGGACATGACTGGTTTCTCCCTTGTCCGATAGAAGATTGGGGCTTTTATAAATTCATTTTTACGTTCGATACTTTTGGTTTCCTAGCACCAGAGGTCGATAACCTCTTAAAAAGATTTCAAAGAGTCACGCATAAAAATATCATGTCCTCTAAGTTCATAAATATTGTATTTAAGAATTGATTTTGTCATCCGAAAAGGATTAGTGGCACAATTTGTTGTCCGTTTGCCTTCCATTCCTCTATAATTCATTGTGAATAAAATAATGTGAATAGTTTCCTGGAAAAATATGTTACCTATGTGAAATTGATAGTATATACCGTTATTTTATTGTGATGATGACCGACATATTTTATTTTACTTCTTCACATTGCAGTTAGACCTGCGGGACAGAGATGGACTTGAGAAAATATTTTCTTCCACAAAGTAAGGATTGTGCATAAGCTTTTGTGATTTTTCTTTTATACAAAAGATTGCACACATTTCAATTTCAAGTTCTCTTGCAATTTCATTTGATCACTGATTTATAAATGTTTGATGTATATGTATATGTATATTTCCTTTCAGATTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAGAAACCACTGCTCTACTATGACAACAACTTGATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGGTAACTTCATTTTAGCTTTAAGTCCTGAATCTTGCAGGGGAAGAATGTCGGGCCGGGTCATATAGACTGAGTACTTGTAGTGGGAAATGATTCAAAAGATTCAGAAGTTTCATCATAAGATACTATAAGATATAGTCTAGATATTTTCTTCTTCTAGTGCCCTGATAATACTGCTACCTTAAAGTGTCTTGTGAGATTGGTTGTTGCGATTTTGTTACTTAACATGATTCTGTATTTCTTGATTGATTTCAGCTTGTGTTCTCCTCTTCAGCCACTGTATACGGTTGGCCAAAGGAGGTCCCCTGCACTGAAGAGTTTCCTTTATCAGCTGCAAGCCCGTATGGACGAACCAAGGTATGACTAGAGAACTATTTAGGGTACTTATCGGATACTTGGGTAGGGATAGTGAAACGAGAATTCCCTTTGCAATCTTGTTTATATTTTGGTTGTATATTACAGATTACAGATGTATCCTATCAGAATCTAACGAGAGTTTTTTTTTTCCTTTCAGCTATACATTGAAGAAATTTGTCGTGATATCTACCGTTCTGATCCAGGATGGAAAATAACACTGTTGAGATACTTCAACCCCGTTGGTGCACATCCTAGTGGTCATATTGGTGAGGATCCTCGCGGAATTCCCAACAACCTCATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCTCTGCATTGACAGTTTTTGGAACAGATTATGGAACAAGTGATGGAACTGGAGTATGTTTTCTTTGTTCTTGACTTGATTTACTGAAATTTTGACTTGGAAAGTTGCATGCTAAGCTCACACACTATCCACTATTTCCCTTCGATTTGGATTATTTTGATAATAATGCTGTCACAGTTGGTCCATTCTTACATGCGTAATTCCCATTTGTTAAGATCTACCTTTGAATTCTTTTGAGGATCTTACATTTTTTTTTTCCGATAAGCTTTTGAGGATCTTACATGATAAATCTTGTCTTTTTCTCAGGTCCGTGATTACATTCATGTTGTTGATTTAGCTGATGGGCACATTGCTGCATTGTGTAAGCTAGATGATCCTAAGACAGGTACTATTTGAAATTTGATCAAATTCTTCTAATAATTTATTCAGTCTATTCATTTTGGTAGACTCCTTGACAGTAGCAATGGTTGTGAACTGATGTTGGATTCCCATAATCAATGAGAGTTGTTTTTTCTTTGGTGCGTTTTTGGATTTTCACTTTTATGTGATGTTGCACATACAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTACAGCTTTTGAACAGGCCTCTCGAAAGGTAACAGACTGATGATTTTATTTATGATCCTTTTTATTTTGCTATCCCTTACTCTCATTTTTAATCATTTTATAAATGTCATTTGATGGTCTCTTTAAGTTGATATAGCATAAGGACTTGGCTTAGTGTTAAGATAATCATTTATGATAGCTCTTAAAGTTGTGTTCAACTTATTTCCATTACGTGAGTTGTAAGTAAACTATAAAAATCTTTCACTTTGACCCTAAGATAGATGATTTTTTAAATATTATGGGATATCTAACAAGGTCAATTGTATTTTTATAAGATATACAATGAAATGAAAAAATTAATGTGAAACAAGTTCATTGACACAACATGTGCAAAATGCGTCGGCAAAGAAACATCTGATCTTTCTATTCAACTGTTATTCAGTTCCATAGCTGAACATATTGACAAACTAATTTATTTATAGTCAAATTAAGCTATTGTTTAGTACATGACTAATTAATTTATACATTTTTTTTTTACTATTTAGAAAATTCCAATTGTAAAGGCTGATCGGAGACCAGGAGATGCTGAAGTTGTTTATGCATCAACAGAAAAAGCAGCAAAAGAACTTAACTGGAAGTAAGTGTGGATTTTCTCAAGCGAATGCTTTCGTGATATTTAGTTGTTCTTAAAACTCTCCTTTCTGTTTATTCAATTCTTTTTACGGAAATTCAATGTTTTTGGTGTCTCCAAATTTTGCAAATATTATATCTTCTAATCAGAAATGTGGGCAAGTTTTCTTGAGTTAATTGTTTTCCCCTTTTCCTCACAAATTTATGTTCCTTGTGCAGGGCTAAATATGGCATTGATGATATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGAATCTGAAGAGTGA
Protein sequence

>MS.gene069594.t1

MSNKTILVTGGAGYIGSHTVLQLLLGGYKVVVVDNLDNSSQISIDRVKKLAGDFAGNLSFHKLDLRDRDGLEKIFSSTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAASPYGRTKLYIEEICRDIYRSDPGWKITLLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRSALTVFGTDYGTSDGTGVRDYIHVVDLADGHIAALCKLDDPKTGCEVYNLGTGKGTSVLEMVTAFEQASRKKIPIVKADRRPGDAEVVYASTEKAAKELNWKAKYGIDDMCRDQWNWASKNPYGYGESEE