AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55805

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55805.t1 MTR_8g099535 98.847 347 4 0 1 347 1 347 0.0 709
MS.gene55805.t1 MTR_5g009170 82.849 344 59 0 3 346 46 389 0.0 613
MS.gene55805.t1 MTR_5g009160 83.090 343 58 0 1 343 1 343 0.0 609
MS.gene55805.t1 MTR_5g009160 83.643 269 44 0 75 343 12 280 1.12e-173 484
MS.gene55805.t1 MTR_8g096880 67.347 343 110 2 2 342 4 346 6.30e-172 482
MS.gene55805.t1 MTR_4g134490 66.569 341 112 2 4 342 25 365 4.83e-169 476
MS.gene55805.t1 MTR_4g134490 65.418 347 112 3 4 342 25 371 2.82e-166 469
MS.gene55805.t1 MTR_8g096880 66.875 320 104 2 2 319 4 323 5.51e-155 438
MS.gene55805.t1 MTR_8g096880 66.667 291 95 2 2 290 4 294 1.10e-139 399
MS.gene55805.t1 MTR_5g009160 81.944 216 39 0 75 290 12 227 1.47e-132 377
MS.gene55805.t1 MTR_2g032100 41.643 353 180 7 6 345 73 412 1.18e-79 249
MS.gene55805.t1 MTR_8g089180 40.688 349 185 6 6 343 73 410 1.38e-77 244
MS.gene55805.t1 MTR_8g089180 40.688 349 185 6 6 343 73 410 1.38e-77 244
MS.gene55805.t1 MTR_2g032100 42.268 194 110 2 6 199 73 264 6.06e-45 156
MS.gene55805.t1 MTR_8g099285 96.296 54 2 0 235 288 3 56 4.76e-30 109
MS.gene55805.t1 MTR_4g102270 28.490 351 211 12 2 334 91 419 6.24e-24 102
MS.gene55805.t1 MTR_4g129820 28.056 360 216 14 5 345 96 431 3.76e-22 97.1
MS.gene55805.t1 MTR_3g084090 28.205 351 206 13 5 334 100 425 2.01e-21 95.1
MS.gene55805.t1 MTR_5g011940 27.711 332 200 12 5 318 91 400 8.88e-21 93.2
MS.gene55805.t1 MTR_1g009600 27.762 353 212 14 4 344 5 326 1.16e-20 93.6
MS.gene55805.t1 MTR_0354s0040 28.313 332 200 11 5 319 83 393 1.35e-20 92.4
MS.gene55805.t1 MTR_0034s0060 27.841 352 213 14 4 344 137 458 4.08e-20 92.0
MS.gene55805.t1 MTR_4g024600 27.576 330 205 12 5 319 102 412 6.01e-20 90.9
MS.gene55805.t1 MTR_2g073240 27.557 352 214 14 4 344 19 340 8.19e-20 90.9
MS.gene55805.t1 MTR_4g063600 28.358 335 189 16 2 326 30 323 1.83e-16 79.7
MS.gene55805.t1 MTR_1g088480 28.000 325 182 16 6 321 120 401 6.80e-15 75.9
MS.gene55805.t1 MTR_2g096660 26.970 330 203 13 2 326 36 332 5.33e-14 72.4
MS.gene55805.t1 MTR_4g120030 27.027 333 191 16 3 326 110 399 5.67e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55805.t1 AT4G10960 80.980 347 66 0 1 347 1 347 0.0 589
MS.gene55805.t1 AT1G64440 78.529 340 73 0 6 345 5 344 0.0 568
MS.gene55805.t1 AT4G23920 80.060 336 67 0 4 339 3 338 0.0 568
MS.gene55805.t1 AT1G12780 66.862 341 111 2 4 342 7 347 3.59e-172 483
MS.gene55805.t1 AT1G63180 66.862 341 111 2 4 342 7 347 2.18e-171 481
MS.gene55805.t1 AT1G63180 65.854 287 96 2 4 288 7 293 2.28e-138 395
MS.gene55805.t1 AT1G30620 42.407 349 179 6 6 343 73 410 7.33e-82 255
MS.gene55805.t1 AT1G30620 42.407 349 179 6 6 343 73 410 7.33e-82 255
MS.gene55805.t1 AT1G30620 42.407 349 179 6 6 343 73 410 7.33e-82 255
MS.gene55805.t1 AT1G30620 42.407 349 179 6 6 343 73 410 7.33e-82 255
MS.gene55805.t1 AT1G30620 42.407 349 179 6 6 343 72 409 8.74e-82 255
MS.gene55805.t1 AT5G44480 41.667 348 181 6 6 342 73 409 1.02e-80 252
MS.gene55805.t1 AT5G44480 41.667 348 181 6 6 342 73 409 1.02e-80 252
MS.gene55805.t1 AT5G44480 41.667 348 181 6 6 342 73 409 1.02e-80 252
MS.gene55805.t1 AT5G44480 41.667 348 181 6 6 342 97 433 2.18e-80 252
MS.gene55805.t1 AT4G20460 41.360 353 181 7 6 345 72 411 3.56e-78 245
MS.gene55805.t1 AT1G30620 44.845 194 105 2 6 199 73 264 1.64e-49 167
MS.gene55805.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.11e-47 161
MS.gene55805.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.11e-47 161
MS.gene55805.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.11e-47 161
MS.gene55805.t1 AT2G34850 40.343 233 132 4 117 345 1 230 1.11e-47 161
MS.gene55805.t1 AT4G00110 28.529 333 198 12 5 319 92 402 1.67e-22 98.2
MS.gene55805.t1 AT2G45310 27.879 330 204 12 5 319 98 408 6.44e-22 96.7
MS.gene55805.t1 AT1G02000 27.928 333 200 12 5 319 93 403 3.67e-21 94.4
MS.gene55805.t1 AT1G53500 27.479 353 213 15 4 344 9 330 3.87e-21 95.1
MS.gene55805.t1 AT1G78570 27.635 351 215 13 4 344 7 328 1.39e-20 93.6
MS.gene55805.t1 AT3G23820 27.536 345 216 11 5 334 113 438 4.03e-20 91.3
MS.gene55805.t1 AT3G14790 26.361 349 222 11 4 344 7 328 2.11e-19 89.7
MS.gene55805.t1 AT3G14790 26.361 349 222 11 4 344 10 331 2.38e-19 89.7
MS.gene55805.t1 AT4G12250 27.035 344 219 11 5 334 97 422 6.30e-19 87.8
MS.gene55805.t1 AT4G30440 26.437 348 216 12 5 334 89 414 1.07e-17 84.0
MS.gene55805.t1 AT3G53520 26.113 337 206 13 6 333 122 424 1.97e-16 80.5
MS.gene55805.t1 AT3G46440 28.000 325 196 14 2 321 27 318 3.31e-15 76.3
MS.gene55805.t1 AT3G46440 28.000 325 196 14 2 321 27 318 3.31e-15 76.3
MS.gene55805.t1 AT3G53520 26.113 337 204 13 6 333 122 422 5.98e-15 75.9
MS.gene55805.t1 AT3G53520 25.356 351 196 17 6 326 122 436 1.83e-14 74.7
MS.gene55805.t1 AT5G59290 27.217 327 198 14 1 321 20 312 4.27e-14 72.8
MS.gene55805.t1 AT5G59290 27.469 324 197 13 3 321 29 319 5.41e-14 72.4
MS.gene55805.t1 AT5G59290 27.469 324 197 13 3 321 44 334 6.71e-14 72.4
MS.gene55805.t1 AT5G59290 27.329 322 194 14 6 321 3 290 1.53e-13 70.9
MS.gene55805.t1 AT2G47650 27.778 342 194 19 6 330 123 428 3.81e-13 70.5
MS.gene55805.t1 AT2G47650 27.139 339 194 18 6 330 123 422 7.04e-13 69.7
MS.gene55805.t1 AT3G62830 25.959 339 198 16 6 330 121 420 1.76e-12 68.6
MS.gene55805.t1 AT3G62830 25.959 339 198 16 6 330 121 420 1.76e-12 68.6
MS.gene55805.t1 AT3G53520 27.755 245 143 10 6 245 122 337 7.61e-12 66.2

Find 97 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAAATAGTACCTGTCTT+AGG 0.297516 4.3:+4501781 None:intergenic
ACAGTCCTCCAGCTTCTTCT+TGG 0.301031 4.3:-4504353 MS.gene55805:CDS
TCCTCTTCAGCCACTGTATA+CGG 0.316611 4.3:-4502581 MS.gene55805:CDS
TATGTCAAACAAAACCATTC+TGG 0.318353 4.3:-4504408 MS.gene55805:CDS
TACTATGACAACAACTTGAT+TGG 0.327471 4.3:-4502911 MS.gene55805:CDS
TCAGTGCAGGGGACCTCCTT+TGG 0.348278 4.3:+4502554 None:intergenic
AAGCAGCAAAAGAACTTAAC+TGG 0.349651 4.3:-4500945 MS.gene55805:CDS
AGGAAAGGGAACATCAGTTT+TGG 0.357526 4.3:-4501569 MS.gene55805:CDS
TCCTTGTGCAGGGCTAAATA+TGG 0.358979 4.3:-4500719 MS.gene55805:intron
CTCCGATCAGCCTTTACAAT+TGG 0.364198 4.3:+4501006 None:intergenic
TACGGGCTTGCAGCTGATAA+AGG 0.374143 4.3:+4502524 None:intergenic
CGGTAACCTTTCCTTTCATA+AGG 0.388596 4.3:-4504243 MS.gene55805:intron
CAGATTCACCATAGCCATAA+GGG 0.392174 4.3:+4500651 None:intergenic
AACAAAACCATTCTGGTTAC+CGG 0.402604 4.3:-4504401 MS.gene55805:CDS
GAGGTTTATAACTTGGGAAC+AGG 0.410110 4.3:-4501589 MS.gene55805:CDS
CCACTAGGATGTGCACCAAC+GGG 0.426245 4.3:+4502253 None:intergenic
GATATCTACCGTTCTGATCC+AGG 0.432927 4.3:-4502307 MS.gene55805:CDS
TGTGCCGTGATCAATGGAAT+TGG 0.433769 4.3:-4500685 MS.gene55805:CDS
GTCCTCCAGCTTCTTCTTGG+CGG 0.444960 4.3:-4504350 MS.gene55805:CDS
TCAGATTCACCATAGCCATA+AGG 0.446286 4.3:+4500650 None:intergenic
GAAGAAGCTGGAGGACTGTA+TGG 0.446733 4.3:+4504357 None:intergenic
CATACCTTGGTTCGTCCATA+CGG 0.448422 4.3:+4502506 None:intergenic
CTTATGAAAGGAAAGGTTAC+CGG 0.450256 4.3:+4504244 None:intergenic
ACTGCAACTTGCTGAACAAA+AGG 0.454333 4.3:+4502187 None:intergenic
TTAGAAAATTCCAATTGTAA+AGG 0.455191 4.3:-4501016 MS.gene55805:intron
AAGTTACCTTCTTGCATCCA+TGG 0.460279 4.3:+4502858 None:intergenic
AATTGTTCTATTTGAAGTCA+TGG 0.463893 4.3:-4502885 MS.gene55805:CDS
ACAAAAGGCATGAGGTTGTT+GGG 0.466227 4.3:+4502202 None:intergenic
ACTATGACAACAACTTGATT+GGG 0.468116 4.3:-4502910 MS.gene55805:CDS
AGGTTGTGAGGTTTATAACT+TGG 0.472015 4.3:-4501596 MS.gene55805:CDS
TATAACTTGGGAACAGGAAA+GGG 0.479391 4.3:-4501583 MS.gene55805:CDS
GCACATCCTAGTGGTCATAT+TGG 0.480170 4.3:-4502244 MS.gene55805:CDS
AACAAAAGGCATGAGGTTGT+TGG 0.482853 4.3:+4502201 None:intergenic
TATAGCACAAGTGATGGAAC+TGG 0.488752 4.3:-4502127 MS.gene55805:CDS
ATGATATGTGCCGTGATCAA+TGG 0.495661 4.3:-4500691 MS.gene55805:CDS
GCCGATGTAACCGGCTCCAC+CGG 0.496013 4.3:+4504382 None:intergenic
TTATCAGCTGCAAGCCCGTA+TGG 0.498617 4.3:-4502521 MS.gene55805:CDS
CACATTGCAGTTAGACCTGC+GGG 0.500648 4.3:-4503179 MS.gene55805:intron
TGTATGGCTGCCGATGTAAC+CGG 0.504067 4.3:+4504373 None:intergenic
TTATAACTTGGGAACAGGAA+AGG 0.505732 4.3:-4501584 MS.gene55805:CDS
GTAAAGGCTGATCGGAGACC+AGG 0.507007 4.3:-4501000 MS.gene55805:CDS
CATGTTGTTGATTTAGCTGA+TGG 0.509630 4.3:-4501835 MS.gene55805:CDS
TAAAGGAAACTCTTCAGTGC+AGG 0.517803 4.3:+4502541 None:intergenic
ATATTTGAGAAGAATTATCA+AGG 0.525846 4.3:+4504303 None:intergenic
GGTTGTGAGGTTTATAACTT+GGG 0.526110 4.3:-4501595 MS.gene55805:CDS
ATTCTGGTTACCGGTGGAGC+CGG 0.529625 4.3:-4504392 MS.gene55805:CDS
ATACCTTGGTTCGTCCATAC+GGG 0.541410 4.3:+4502507 None:intergenic
GTGCCGTGATCAATGGAATT+GGG 0.542969 4.3:-4500684 MS.gene55805:CDS
CAAGTCCATCTCTGTCCCGC+AGG 0.543353 4.3:+4503164 None:intergenic
AAGGTTACCGGCGAAATCAC+CGG 0.545925 4.3:+4504256 None:intergenic
ACCACTAGGATGTGCACCAA+CGG 0.547577 4.3:+4502252 None:intergenic
TTTGTTCAGCAAGTTGCAGT+TGG 0.550895 4.3:-4502184 MS.gene55805:CDS
ACCGGTGGAGCCGGTTACAT+CGG 0.553635 4.3:-4504383 MS.gene55805:CDS
TTCCAATTGTAAAGGCTGAT+CGG 0.556362 4.3:-4501008 MS.gene55805:CDS
GGCTCCACCGGTAACCAGAA+TGG 0.558207 4.3:+4504394 None:intergenic
CACTGTATACGGTTGGCCAA+AGG 0.562044 4.3:-4502570 MS.gene55805:CDS
TTAGACCTGCGGGACAGAGA+TGG 0.564284 4.3:-4503169 MS.gene55805:CDS
TAAACAACTTCAGCATCTCC+TGG 0.570331 4.3:+4500982 None:intergenic
AGTTACCTTCTTGCATCCAT+GGG 0.578547 4.3:+4502859 None:intergenic
TGTAACCGCCAAGAAGAAGC+TGG 0.579042 4.3:+4504345 None:intergenic
ACAGATTATAGCACAAGTGA+TGG 0.581825 4.3:-4502133 MS.gene55805:CDS
ACCGTATACAGTGGCTGAAG+AGG 0.582934 4.3:+4502580 None:intergenic
CTTCAGCCACTGTATACGGT+TGG 0.587440 4.3:-4502577 MS.gene55805:CDS
AAAGGAAACTCTTCAGTGCA+GGG 0.590389 4.3:+4502542 None:intergenic
GGCTGCCCATGGATGCAAGA+AGG 0.591203 4.3:-4502864 MS.gene55805:intron
TTTGCTGGACTGAAAGCAGT+AGG 0.592924 4.3:-4502959 MS.gene55805:CDS
AAACTCGCCGGTGATTTCGC+CGG 0.593743 4.3:-4504263 MS.gene55805:CDS
CAACAACATGAATGTAATCA+CGG 0.594284 4.3:+4501848 None:intergenic
TTTGAAGTCATGGCTGCCCA+TGG 0.595050 4.3:-4502875 MS.gene55805:CDS
AAGCTAGATGATCCTAAGAC+AGG 0.595868 4.3:-4501793 MS.gene55805:intron
TTGTTGTCATAGTAGAGCAG+TGG 0.596053 4.3:+4502920 None:intergenic
TGTGCCGCGCACCTTATGAA+AGG 0.596057 4.3:+4504232 None:intergenic
GAGTTTCTTGACTCTGTCGA+TGG 0.600323 4.3:+4504280 None:intergenic
CGGTTACAAAGTCGTCGTGG+TGG 0.600423 4.3:-4504330 MS.gene55805:CDS
TTGAGATACTTCAACCCCGT+TGG 0.604257 4.3:-4502268 MS.gene55805:CDS
TGTATACGGTTGGCCAAAGG+AGG 0.615492 4.3:-4502567 MS.gene55805:CDS
TAGCCCAATTCCATTGATCA+CGG 0.615843 4.3:+4500681 None:intergenic
GACAGAGTCAAGAAACTCGC+CGG 0.617460 4.3:-4504275 MS.gene55805:CDS
TCTACCGTTCTGATCCAGGA+TGG 0.618503 4.3:-4502303 MS.gene55805:CDS
ATGTTGTTGATTTAGCTGAT+GGG 0.626123 4.3:-4501834 MS.gene55805:CDS
TCCTAGTGGTCATATTGGTG+AGG 0.630469 4.3:-4502239 MS.gene55805:CDS
CGCGCACCTTATGAAAGGAA+AGG 0.634737 4.3:+4504237 None:intergenic
CCCGTTGGTGCACATCCTAG+TGG 0.638263 4.3:-4502253 MS.gene55805:CDS
TCAGTCTGTTACCTTTCGAG+AGG 0.639537 4.3:+4501522 None:intergenic
TGTTGCACATACAGGTTGTG+AGG 0.655389 4.3:-4501608 MS.gene55805:intron
TCCTCACCAATATGACCACT+AGG 0.658255 4.3:+4502238 None:intergenic
TCACATTGCAGTTAGACCTG+CGG 0.664949 4.3:-4503180 MS.gene55805:intron
AAGGAAACTCTTCAGTGCAG+GGG 0.668924 4.3:+4502543 None:intergenic
AAAACCATTCTGGTTACCGG+TGG 0.670384 4.3:-4504398 MS.gene55805:CDS
CTTGCTGAACAAAAGGCATG+AGG 0.677336 4.3:+4502194 None:intergenic
CTTTGGCCAACCGTATACAG+TGG 0.681860 4.3:+4502571 None:intergenic
CACTAGGATGTGCACCAACG+GGG 0.689749 4.3:+4502254 None:intergenic
TGGCGGTTACAAAGTCGTCG+TGG 0.699244 4.3:-4504333 MS.gene55805:CDS
AAGCCCGTATGGACGAACCA+AGG 0.710697 4.3:-4502510 MS.gene55805:intron
AACCGCCAAGAAGAAGCTGG+AGG 0.741411 4.3:+4504348 None:intergenic
CATATTGGTGAGGATCCTCG+CGG 0.752117 4.3:-4502229 MS.gene55805:CDS
AGGTTGTTGGGAATTCCGCG+AGG 0.771351 4.3:+4502214 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATTTTGTATTCAATA+AGG + chr4.3:4501507-4501526 None:intergenic 10.0%
!!! AGATGATTTTTTAAATATTA+TGG - chr4.3:4503769-4503788 MS.gene55805:intron 10.0%
!!! GATGATTTTTTAAATATTAT+GGG - chr4.3:4503770-4503789 MS.gene55805:intron 10.0%
!!! TATTTGAATTATTTTTTGTA+AGG - chr4.3:4501381-4501400 MS.gene55805:intron 10.0%
!!! TTTATTAAATTATTTTCAAG+TGG - chr4.3:4501020-4501039 MS.gene55805:intron 10.0%
!! AAAACTTAAATAAGTGTTTA+TGG - chr4.3:4501325-4501344 MS.gene55805:intron 15.0%
!! AAACTTAAATAAGTGTTTAT+GGG - chr4.3:4501326-4501345 MS.gene55805:intron 15.0%
!! AGAAGTAAAATAAAATATGT+CGG + chr4.3:4501850-4501869 None:intergenic 15.0%
!! GATATAATATTTGCAAAATT+TGG + chr4.3:4504243-4504262 None:intergenic 15.0%
!! TTAAAAAATCATCTATCTTA+GGG + chr4.3:4503763-4503782 None:intergenic 15.0%
!! TTAGTTAGTAAATAATGATT+TGG - chr4.3:4500899-4500918 MS.gene55805:intron 15.0%
!! TTTAAAAAATCATCTATCTT+AGG + chr4.3:4503764-4503783 None:intergenic 15.0%
!!! ATATTTAATAGTTTTTCACT+AGG - chr4.3:4501522-4501541 MS.gene55805:intron 15.0%
!!! ATTTTATAAATGTCATTTGA+TGG - chr4.3:4503605-4503624 MS.gene55805:intron 15.0%
!!! TGTTTATTCAATTCTTTTTA+TGG - chr4.3:4504195-4504214 MS.gene55805:intron 15.0%
!! AAAGAATTGAATAAACAGAA+AGG + chr4.3:4504192-4504211 None:intergenic 20.0%
!! AAATATAAACAAGATTGCAA+AGG + chr4.3:4502631-4502650 None:intergenic 20.0%
!! AATATAAACAAGATTGCAAA+GGG + chr4.3:4502630-4502649 None:intergenic 20.0%
!! AATGATTAAAAATGAGAGTA+AGG + chr4.3:4503588-4503607 None:intergenic 20.0%
!! ATATTTGAGAAGAATTATCA+AGG + chr4.3:4500750-4500769 None:intergenic 20.0%
!! ATGATTAAAAATGAGAGTAA+GGG + chr4.3:4503587-4503606 None:intergenic 20.0%
!! GAGAAATAAAGAATTGAAAA+TGG + chr4.3:4500860-4500879 None:intergenic 20.0%
!! TACAATATTTATGAACTTAG+AGG + chr4.3:4501719-4501738 None:intergenic 20.0%
!! TTAGAAAATTCCAATTGTAA+AGG - chr4.3:4504034-4504053 MS.gene55805:intron 20.0%
!!! GTTTTACAGTGTTTTTTATT+GGG - chr4.3:4500996-4501015 MS.gene55805:CDS 20.0%
!!! TGTTTTACAGTGTTTTTTAT+TGG - chr4.3:4500995-4501014 MS.gene55805:CDS 20.0%
!!! TTATGGAAATTCAATGTTTT+TGG - chr4.3:4504212-4504231 MS.gene55805:intron 20.0%
!!! TTGCAATCTTGTTTATATTT+TGG - chr4.3:4502631-4502650 MS.gene55805:intron 20.0%
!!! TTTATTCAGTCTATTCATTT+TGG - chr4.3:4503314-4503333 MS.gene55805:intron 20.0%
! AAAAATACAATTGACCTTGT+TGG + chr4.3:4503800-4503819 None:intergenic 25.0%
! AAAAGGGTAAAATTGAAAGA+AGG - chr4.3:4501051-4501070 MS.gene55805:intron 25.0%
! AAAGGGTAAAATTGAAAGAA+GGG - chr4.3:4501052-4501071 MS.gene55805:intron 25.0%
! AAAGGTAGATCTTAACAAAT+GGG + chr4.3:4503099-4503118 None:intergenic 25.0%
! AAATACAAAATCACCATGTT+CGG + chr4.3:4500965-4500984 None:intergenic 25.0%
! AACATAAATTTGTGAGGAAA+AGG + chr4.3:4504312-4504331 None:intergenic 25.0%
! AATAAAATATGGAAGGCAAA+CGG + chr4.3:4501793-4501812 None:intergenic 25.0%
! ACATAAATTTGTGAGGAAAA+GGG + chr4.3:4504311-4504330 None:intergenic 25.0%
! ATCAAAATAATCCAAATCGA+AGG + chr4.3:4503035-4503054 None:intergenic 25.0%
! CATCATCACAATAAATATGT+CGG + chr4.3:4501826-4501845 None:intergenic 25.0%
! GTCATCATCACAATAAAATA+TGG + chr4.3:4501804-4501823 None:intergenic 25.0%
! GTTGTGTGTGAATAATAATT+GGG - chr4.3:4501126-4501145 MS.gene55805:intron 25.0%
! TAAGGGATAGCAAAATAAAA+AGG + chr4.3:4503570-4503589 None:intergenic 25.0%
! TATGACTAGAGAACTATTTA+GGG - chr4.3:4502563-4502582 MS.gene55805:CDS 25.0%
! TCAAAATAATCCAAATCGAA+GGG + chr4.3:4503034-4503053 None:intergenic 25.0%
! TCATCACAATAAAATATGGA+AGG + chr4.3:4501800-4501819 None:intergenic 25.0%
! TGTTGTGTGTGAATAATAAT+TGG - chr4.3:4501125-4501144 MS.gene55805:intron 25.0%
!! AAAACAACTCTCATTGATTA+TGG + chr4.3:4503385-4503404 None:intergenic 25.0%
!! AAACAACTCTCATTGATTAT+GGG + chr4.3:4503384-4503403 None:intergenic 25.0%
!! AATTGTTCTATTTGAAGTCA+TGG - chr4.3:4502165-4502184 MS.gene55805:CDS 25.0%
!! ATAAATCTTGTCTTTTTCTC+AGG - chr4.3:4503178-4503197 MS.gene55805:intron 25.0%
!! ATATTTTCTTCCACAAAGTA+AGG - chr4.3:4501914-4501933 MS.gene55805:intron 25.0%
!! ATTTTTACGTTCGATACTTT+TGG - chr4.3:4501625-4501644 MS.gene55805:intron 25.0%
!! TTAATAGTTTTTCACTAGGT+GGG - chr4.3:4501526-4501545 MS.gene55805:intron 25.0%
!! TTCTTTCAATTTTACCCTTT+TGG + chr4.3:4501052-4501071 None:intergenic 25.0%
!! TTTAATAGTTTTTCACTAGG+TGG - chr4.3:4501525-4501544 MS.gene55805:intron 25.0%
!!! AATGAGAGTTGTTTTTTCTT+TGG - chr4.3:4503390-4503409 MS.gene55805:intron 25.0%
!!! ATTTTTTATTTTGCCGAACA+TGG - chr4.3:4500949-4500968 MS.gene55805:CDS 25.0%
!!! CTCTTTGAAATCTTTTTAAG+AGG + chr4.3:4501675-4501694 None:intergenic 25.0%
!!! CTTTAAGTTGATATAGCATA+AGG - chr4.3:4503631-4503650 MS.gene55805:intron 25.0%
!!! GATTTACTGAAATTTTGACT+TGG - chr4.3:4502971-4502990 MS.gene55805:CDS 25.0%
!!! TACATAACATGCTTTTTGAT+GGG - chr4.3:4501181-4501200 MS.gene55805:intron 25.0%
AAAGCATGTTATGTACTTGT+CGG + chr4.3:4501176-4501195 None:intergenic 30.0%
AAATTTATGTTCCTTGTGCA+GGG - chr4.3:4504321-4504340 MS.gene55805:CDS 30.0%
ACAAGGAACATAAATTTGTG+AGG + chr4.3:4504318-4504337 None:intergenic 30.0%
ACTATGACAACAACTTGATT+GGG - chr4.3:4502140-4502159 MS.gene55805:CDS 30.0%
AGATCCTCAAAAGAATTCAA+AGG + chr4.3:4503117-4503136 None:intergenic 30.0%
ATATCTTCTGATCAGAAATG+TGG - chr4.3:4504258-4504277 MS.gene55805:CDS 30.0%
ATATTATGGGATATCCAACA+AGG - chr4.3:4503783-4503802 MS.gene55805:intron 30.0%
CAAAGGTAGATCTTAACAAA+TGG + chr4.3:4503100-4503119 None:intergenic 30.0%
CAACAACATGAATGTAATCA+CGG + chr4.3:4503205-4503224 None:intergenic 30.0%
CATAAATTTGTGAGGAAAAG+GGG + chr4.3:4504310-4504329 None:intergenic 30.0%
GTATGACTAGAGAACTATTT+AGG - chr4.3:4502562-4502581 MS.gene55805:CDS 30.0%
TAAGATCCTCAAAAGCTTAT+CGG + chr4.3:4503154-4503173 None:intergenic 30.0%
TACTATGACAACAACTTGAT+TGG - chr4.3:4502139-4502158 MS.gene55805:CDS 30.0%
TATCTTCTGATCAGAAATGT+GGG - chr4.3:4504259-4504278 MS.gene55805:CDS 30.0%
TTAAGGTAGCAGTATTATCA+GGG + chr4.3:4502370-4502389 None:intergenic 30.0%
TTCTTCAATGTATAGCTGAA+AGG + chr4.3:4502714-4502733 None:intergenic 30.0%
TTTACTTACAACTCACGTAA+TGG + chr4.3:4503718-4503737 None:intergenic 30.0%
TTTCAAATAGTACCTGTCTT+AGG + chr4.3:4503272-4503291 None:intergenic 30.0%
TTTGTCAATATGTTCAGCTA+TGG + chr4.3:4503937-4503956 None:intergenic 30.0%
! GAACTATTTAGGGTACTTAT+CGG - chr4.3:4502573-4502592 MS.gene55805:CDS 30.0%
! TCTACCTTTGAATTCTTTTG+AGG - chr4.3:4503110-4503129 MS.gene55805:intron 30.0%
! TTCAATTTTACCCTTTTGGT+TGG + chr4.3:4501048-4501067 None:intergenic 30.0%
! TTTAAGGTAGCAGTATTATC+AGG + chr4.3:4502371-4502390 None:intergenic 30.0%
!! ATGTTGTTGATTTAGCTGAT+GGG - chr4.3:4503216-4503235 MS.gene55805:intron 30.0%
!! ATTGATTTTGTCATCCGAAA+AGG - chr4.3:4501746-4501765 MS.gene55805:intron 30.0%
!! GTACATAACATGCTTTTTGA+TGG - chr4.3:4501180-4501199 MS.gene55805:intron 30.0%
!! TCAATTTTACCCTTTTGGTT+GGG + chr4.3:4501047-4501066 None:intergenic 30.0%
!!! TTTTTTCCGATAAGCTTTTG+AGG - chr4.3:4503145-4503164 MS.gene55805:CDS 30.0%
!!! TTTTTTCTTTGGTGCGTTTT+TGG - chr4.3:4503401-4503420 MS.gene55805:intron 30.0%
AACTCTCGTTAGATTCTGAT+AGG + chr4.3:4502683-4502702 None:intergenic 35.0%
AACTTAACTGGAAGTAAGTG+TGG - chr4.3:4504117-4504136 MS.gene55805:intron 35.0%
AAGCAGCAAAAGAACTTAAC+TGG - chr4.3:4504105-4504124 MS.gene55805:intron 35.0%
AAGCATGTTATGTACTTGTC+GGG + chr4.3:4501175-4501194 None:intergenic 35.0%
ACAGATTATAGCACAAGTGA+TGG - chr4.3:4502917-4502936 MS.gene55805:CDS 35.0%
AGGTTGTGAGGTTTATAACT+TGG - chr4.3:4503454-4503473 MS.gene55805:intron 35.0%
ATAGACTGAGTACTTGTAGT+GGG - chr4.3:4502269-4502288 MS.gene55805:CDS 35.0%
ATAGTTCTCTAGTCATACCT+TGG + chr4.3:4502560-4502579 None:intergenic 35.0%
ATGACAGCATCAAATCTGAA+AGG + chr4.3:4502067-4502086 None:intergenic 35.0%
CAAATTTATGTTCCTTGTGC+AGG - chr4.3:4504320-4504339 MS.gene55805:CDS 35.0%
CAATCTCACAAGACACTTTA+AGG + chr4.3:4502387-4502406 None:intergenic 35.0%
CTTATGAAAGGAAAGGTTAC+CGG + chr4.3:4500809-4500828 None:intergenic 35.0%
GATAATAATGCTGTCACAGT+TGG - chr4.3:4503052-4503071 MS.gene55805:intron 35.0%
GGTTGTGAGGTTTATAACTT+GGG - chr4.3:4503455-4503474 MS.gene55805:intron 35.0%
GTTGATATAGCATAAGGACT+TGG - chr4.3:4503637-4503656 MS.gene55805:intron 35.0%
TAAAAGCCCCAATCTTCTAT+CGG + chr4.3:4501598-4501617 None:intergenic 35.0%
TATAACTTGGGAACAGGAAA+GGG - chr4.3:4503467-4503486 MS.gene55805:intron 35.0%
TATAGACTGAGTACTTGTAG+TGG - chr4.3:4502268-4502287 MS.gene55805:CDS 35.0%
TATGCACAATCCTTACTTTG+TGG + chr4.3:4501927-4501946 None:intergenic 35.0%
TCACCAAAAAAAAGCCAGAT+TGG + chr4.3:4501240-4501259 None:intergenic 35.0%
TTATAACTTGGGAACAGGAA+AGG - chr4.3:4503466-4503485 MS.gene55805:intron 35.0%
TTATGTGATGTTGCACATAC+AGG - chr4.3:4503434-4503453 MS.gene55805:intron 35.0%
TTCCAATTGTAAAGGCTGAT+CGG - chr4.3:4504042-4504061 MS.gene55805:intron 35.0%
TTTAAGTCCTGAATCTTGCA+GGG - chr4.3:4502224-4502243 MS.gene55805:CDS 35.0%
! AACAAAACCATTCTGGTTAC+CGG - chr4.3:4500649-4500668 MS.gene55805:CDS 35.0%
! CTTAAAGTGTCTTGTGAGAT+TGG - chr4.3:4502385-4502404 MS.gene55805:intron 35.0%
!! ATTGTGCCACTAATCCTTTT+CGG + chr4.3:4501763-4501782 None:intergenic 35.0%
!! CATGTTGTTGATTTAGCTGA+TGG - chr4.3:4503215-4503234 MS.gene55805:intron 35.0%
!! GAAAGAAGGGTATTATTCCT+GGG - chr4.3:4501065-4501084 MS.gene55805:intron 35.0%
!! TGAAAGAAGGGTATTATTCC+TGG - chr4.3:4501064-4501083 MS.gene55805:intron 35.0%
!!! AACAGTGTTATTTTCCATCC+TGG + chr4.3:4502764-4502783 None:intergenic 35.0%
!!! GATCCAATCTGGCTTTTTTT+TGG - chr4.3:4501234-4501253 MS.gene55805:intron 35.0%
AAAGGAAACTCTTCAGTGCA+GGG + chr4.3:4502511-4502530 None:intergenic 40.0%
AAGCTAGATGATCCTAAGAC+AGG - chr4.3:4503257-4503276 MS.gene55805:intron 40.0%
AAGTTACCTTCTTGCATCCA+TGG + chr4.3:4502195-4502214 None:intergenic 40.0%
ACAACATGTGCAAAATGCGT+CGG - chr4.3:4503870-4503889 MS.gene55805:intron 40.0%
ACAAGGGAAACTTGTATGTG+TGG - chr4.3:4501550-4501569 MS.gene55805:CDS 40.0%
ACTTATCGGATACTTGGGTA+GGG - chr4.3:4502587-4502606 MS.gene55805:CDS 40.0%
AGCAAAAACCCTTATGGCTA+TGG - chr4.3:4504391-4504410 MS.gene55805:CDS 40.0%
AGCTGAGTCTGTTTCACAAT+TGG - chr4.3:4501149-4501168 MS.gene55805:intron 40.0%
AGTACTCAGTCTATATGACC+TGG + chr4.3:4502263-4502282 None:intergenic 40.0%
AGTTACCTTCTTGCATCCAT+GGG + chr4.3:4502194-4502213 None:intergenic 40.0%
ATGATATGTGCCGTGATCAA+TGG - chr4.3:4504359-4504378 MS.gene55805:CDS 40.0%
CAATGGTTGTGAACTGATGT+TGG - chr4.3:4503355-4503374 MS.gene55805:intron 40.0%
CAGATTCACCATAGCCATAA+GGG + chr4.3:4504402-4504421 None:intergenic 40.0%
CGGTAACCTTTCCTTTCATA+AGG - chr4.3:4500807-4500826 MS.gene55805:intron 40.0%
CGTTACTACTAGATCCAATC+TGG - chr4.3:4501223-4501242 MS.gene55805:intron 40.0%
CTTTAAGTCCTGAATCTTGC+AGG - chr4.3:4502223-4502242 MS.gene55805:CDS 40.0%
GAGGTTTATAACTTGGGAAC+AGG - chr4.3:4503461-4503480 MS.gene55805:intron 40.0%
GGGAATTACGCATGTAAGAA+TGG + chr4.3:4503079-4503098 None:intergenic 40.0%
TAAACAACTTCAGCATCTCC+TGG + chr4.3:4504071-4504090 None:intergenic 40.0%
TAAAGGAAACTCTTCAGTGC+AGG + chr4.3:4502512-4502531 None:intergenic 40.0%
TACTTATCGGATACTTGGGT+AGG - chr4.3:4502586-4502605 MS.gene55805:CDS 40.0%
TAGCCCAATTCCATTGATCA+CGG + chr4.3:4504372-4504391 None:intergenic 40.0%
TCAGATTCACCATAGCCATA+AGG + chr4.3:4504403-4504422 None:intergenic 40.0%
TCCAAATCGAAGGGAAATAG+TGG + chr4.3:4503025-4503044 None:intergenic 40.0%
TCCACTATTTCCCTTCGATT+TGG - chr4.3:4503021-4503040 MS.gene55805:intron 40.0%
TGTCATCCGAAAAGGATTAG+TGG - chr4.3:4501754-4501773 MS.gene55805:intron 40.0%
TTAAGTCCTGAATCTTGCAG+GGG - chr4.3:4502225-4502244 MS.gene55805:CDS 40.0%
TTGTTGTCATAGTAGAGCAG+TGG + chr4.3:4502133-4502152 None:intergenic 40.0%
TTTGTTCAGCAAGTTGCAGT+TGG - chr4.3:4502866-4502885 MS.gene55805:CDS 40.0%
! AACAAAAGGCATGAGGTTGT+TGG + chr4.3:4502852-4502871 None:intergenic 40.0%
! ACAAAAGGCATGAGGTTGTT+GGG + chr4.3:4502851-4502870 None:intergenic 40.0%
! AGGAAAGGGAACATCAGTTT+TGG - chr4.3:4503481-4503500 MS.gene55805:intron 40.0%
! AGGGTACTTATCGGATACTT+GGG - chr4.3:4502582-4502601 MS.gene55805:CDS 40.0%
! GATGCTGTCATACATTTTGC+TGG - chr4.3:4502076-4502095 MS.gene55805:intron 40.0%
! GATGGTTACAGCTTTTGAAC+AGG - chr4.3:4503505-4503524 MS.gene55805:intron 40.0%
! TAGGGTACTTATCGGATACT+TGG - chr4.3:4502581-4502600 MS.gene55805:CDS 40.0%
! TATAGCACAAGTGATGGAAC+TGG - chr4.3:4502923-4502942 MS.gene55805:CDS 40.0%
! TTTTCACTAGGTGGGTACAA+GGG - chr4.3:4501534-4501553 MS.gene55805:CDS 40.0%
! TTTTCCATCCTGGATCAGAA+CGG + chr4.3:4502754-4502773 None:intergenic 40.0%
! TTTTTCACTAGGTGGGTACA+AGG - chr4.3:4501533-4501552 MS.gene55805:intron 40.0%
!! AAGGGTATTATTCCTGGGAT+GGG - chr4.3:4501070-4501089 MS.gene55805:intron 40.0%
!! ACTGCAACTTGCTGAACAAA+AGG + chr4.3:4502866-4502885 None:intergenic 40.0%
!! CATTTTGGTAGACTCCTTGA+CGG - chr4.3:4503329-4503348 MS.gene55805:intron 40.0%
AAGGAAACTCTTCAGTGCAG+GGG + chr4.3:4502510-4502529 None:intergenic 45.0%
ATCTTGCAGGGGAAGAATGT+CGG - chr4.3:4502236-4502255 MS.gene55805:CDS 45.0%
ATTCTTCCCCTGCAAGATTC+AGG + chr4.3:4502234-4502253 None:intergenic 45.0%
CCCAATCTTCTATCGGACAA+GGG + chr4.3:4501591-4501610 None:intergenic 45.0%
CCCTTGTCCGATAGAAGATT+GGG - chr4.3:4501588-4501607 MS.gene55805:CDS 45.0%
CCTTGTCCGATAGAAGATTG+GGG - chr4.3:4501589-4501608 MS.gene55805:CDS 45.0%
CTCCGATCAGCCTTTACAAT+TGG + chr4.3:4504047-4504066 None:intergenic 45.0%
CTTGTATGTGTGGACATGAC+TGG - chr4.3:4501560-4501579 MS.gene55805:CDS 45.0%
CTTTCCTTTCATAAGGTGCG+CGG - chr4.3:4500814-4500833 MS.gene55805:intron 45.0%
GAGTTTCTTGACTCTGTCGA+TGG + chr4.3:4500773-4500792 None:intergenic 45.0%
GATATCTACCGTTCTGATCC+AGG - chr4.3:4502743-4502762 MS.gene55805:intron 45.0%
GCACATCCTAGTGGTCATAT+TGG - chr4.3:4502806-4502825 MS.gene55805:intron 45.0%
GTGCCGTGATCAATGGAATT+GGG - chr4.3:4504366-4504385 MS.gene55805:CDS 45.0%
TCAAGTGGACCCAACCAAAA+GGG - chr4.3:4501035-4501054 MS.gene55805:intron 45.0%
TCACATTGCAGTTAGACCTG+CGG - chr4.3:4501870-4501889 MS.gene55805:intron 45.0%
TCAGTCTGTTACCTTTCGAG+AGG + chr4.3:4503531-4503550 None:intergenic 45.0%
TCCCTTGTCCGATAGAAGAT+TGG - chr4.3:4501587-4501606 MS.gene55805:CDS 45.0%
TCCTAGTGGTCATATTGGTG+AGG - chr4.3:4502811-4502830 MS.gene55805:intron 45.0%
TCCTCACCAATATGACCACT+AGG + chr4.3:4502815-4502834 None:intergenic 45.0%
TCCTCTTCAGCCACTGTATA+CGG - chr4.3:4502469-4502488 MS.gene55805:intron 45.0%
TCCTTGTGCAGGGCTAAATA+TGG - chr4.3:4504331-4504350 MS.gene55805:CDS 45.0%
TGTGCCGTGATCAATGGAAT+TGG - chr4.3:4504365-4504384 MS.gene55805:CDS 45.0%
TGTTGCACATACAGGTTGTG+AGG - chr4.3:4503442-4503461 MS.gene55805:intron 45.0%
TTCAAGTGGACCCAACCAAA+AGG - chr4.3:4501034-4501053 MS.gene55805:intron 45.0%
TTGAGATACTTCAACCCCGT+TGG - chr4.3:4502782-4502801 MS.gene55805:intron 45.0%
TTTAAGAGGTCATCGACCTC+TGG + chr4.3:4501661-4501680 None:intergenic 45.0%
TTTGCTGGACTGAAAGCAGT+AGG - chr4.3:4502091-4502110 MS.gene55805:intron 45.0%
! AAAACCATTCTGGTTACCGG+TGG - chr4.3:4500652-4500671 MS.gene55805:CDS 45.0%
! ATACCTTGGTTCGTCCATAC+GGG + chr4.3:4502546-4502565 None:intergenic 45.0%
! CATACCTTGGTTCGTCCATA+CGG + chr4.3:4502547-4502566 None:intergenic 45.0%
! CTTGCTGAACAAAAGGCATG+AGG + chr4.3:4502859-4502878 None:intergenic 45.0%
! TTTTGAACAGGCCTCTCGAA+AGG - chr4.3:4503517-4503536 MS.gene55805:intron 45.0%
!! CGCTCTGCATTGACAGTTTT+TGG - chr4.3:4502893-4502912 MS.gene55805:CDS 45.0%
!! GAAGGGTATTATTCCTGGGA+TGG - chr4.3:4501069-4501088 MS.gene55805:intron 45.0%
!! TGGGCTAGCAAAAACCCTTA+TGG - chr4.3:4504385-4504404 MS.gene55805:CDS 45.0%
!!! GGGAACATCAGTTTTGGAGA+TGG - chr4.3:4503487-4503506 MS.gene55805:intron 45.0%
!!! TTTTGGTTTCCTAGCACCAG+AGG - chr4.3:4501642-4501661 MS.gene55805:intron 45.0%
AAGGTTACCGGCGAAATCAC+CGG + chr4.3:4500797-4500816 None:intergenic 50.0%
ACAGTCCTCCAGCTTCTTCT+TGG - chr4.3:4500697-4500716 MS.gene55805:CDS 50.0%
ACCACTAGGATGTGCACCAA+CGG + chr4.3:4502801-4502820 None:intergenic 50.0%
ACCGTATACAGTGGCTGAAG+AGG + chr4.3:4502473-4502492 None:intergenic 50.0%
AGACTCCTTGACGGTAGCAA+TGG - chr4.3:4503338-4503357 MS.gene55805:intron 50.0%
CACAACCATTGCTACCGTCA+AGG + chr4.3:4503346-4503365 None:intergenic 50.0%
CACATTGCAGTTAGACCTGC+GGG - chr4.3:4501871-4501890 MS.gene55805:intron 50.0%
CATATTGGTGAGGATCCTCG+CGG - chr4.3:4502821-4502840 MS.gene55805:intron 50.0%
CCCCAATCTTCTATCGGACA+AGG + chr4.3:4501592-4501611 None:intergenic 50.0%
CGCGCACCTTATGAAAGGAA+AGG + chr4.3:4500816-4500835 None:intergenic 50.0%
CTTCAGCCACTGTATACGGT+TGG - chr4.3:4502473-4502492 MS.gene55805:intron 50.0%
CTTTGGCCAACCGTATACAG+TGG + chr4.3:4502482-4502501 None:intergenic 50.0%
GAAGAAGCTGGAGGACTGTA+TGG + chr4.3:4500696-4500715 None:intergenic 50.0%
GACAGAGTCAAGAAACTCGC+CGG - chr4.3:4500775-4500794 MS.gene55805:intron 50.0%
GCCATATTTAGCCCTGCACA+AGG + chr4.3:4504335-4504354 None:intergenic 50.0%
TACGGGCTTGCAGCTGATAA+AGG + chr4.3:4502529-4502548 None:intergenic 50.0%
TATTCCTGGGATGGGAGAGA+CGG - chr4.3:4501078-4501097 MS.gene55805:intron 50.0%
TCTACCGTTCTGATCCAGGA+TGG - chr4.3:4502747-4502766 MS.gene55805:intron 50.0%
TCTTGCAGGGGAAGAATGTC+GGG - chr4.3:4502237-4502256 MS.gene55805:CDS 50.0%
TGTAACCGCCAAGAAGAAGC+TGG + chr4.3:4500708-4500727 None:intergenic 50.0%
TGTATGGCTGCCGATGTAAC+CGG + chr4.3:4500680-4500699 None:intergenic 50.0%
TTATCAGCTGCAAGCCCGTA+TGG - chr4.3:4502529-4502548 MS.gene55805:CDS 50.0%
! CACTGTATACGGTTGGCCAA+AGG - chr4.3:4502480-4502499 MS.gene55805:intron 50.0%
! TGTATACGGTTGGCCAAAGG+AGG - chr4.3:4502483-4502502 MS.gene55805:intron 50.0%
! TTTGAAGTCATGGCTGCCCA+TGG - chr4.3:4502175-4502194 MS.gene55805:CDS 50.0%
AAACTCGCCGGTGATTTCGC+CGG - chr4.3:4500787-4500806 MS.gene55805:intron 55.0%
AACCGCCAAGAAGAAGCTGG+AGG + chr4.3:4500705-4500724 None:intergenic 55.0%
AAGCCCGTATGGACGAACCA+AGG - chr4.3:4502540-4502559 MS.gene55805:CDS 55.0%
AGGTTGTTGGGAATTCCGCG+AGG + chr4.3:4502839-4502858 None:intergenic 55.0%
CACTAGGATGTGCACCAACG+GGG + chr4.3:4502799-4502818 None:intergenic 55.0%
CCACTAGGATGTGCACCAAC+GGG + chr4.3:4502800-4502819 None:intergenic 55.0%
CGGTTACAAAGTCGTCGTGG+TGG - chr4.3:4500720-4500739 MS.gene55805:intron 55.0%
GTAAAGGCTGATCGGAGACC+AGG - chr4.3:4504050-4504069 MS.gene55805:intron 55.0%
GTCCTCCAGCTTCTTCTTGG+CGG - chr4.3:4500700-4500719 MS.gene55805:CDS 55.0%
TGGCGGTTACAAAGTCGTCG+TGG - chr4.3:4500717-4500736 MS.gene55805:intron 55.0%
TGTGCCGCGCACCTTATGAA+AGG + chr4.3:4500821-4500840 None:intergenic 55.0%
TTAGACCTGCGGGACAGAGA+TGG - chr4.3:4501881-4501900 MS.gene55805:intron 55.0%
! ATTCTGGTTACCGGTGGAGC+CGG - chr4.3:4500658-4500677 MS.gene55805:CDS 55.0%
ACCGGTGGAGCCGGTTACAT+CGG - chr4.3:4500667-4500686 MS.gene55805:CDS 60.0%
CAAGTCCATCTCTGTCCCGC+AGG + chr4.3:4501889-4501908 None:intergenic 60.0%
CCCGTTGGTGCACATCCTAG+TGG - chr4.3:4502797-4502816 MS.gene55805:intron 60.0%
GGCTCCACCGGTAACCAGAA+TGG + chr4.3:4500659-4500678 None:intergenic 60.0%
GGCTGCCCATGGATGCAAGA+AGG - chr4.3:4502186-4502205 MS.gene55805:CDS 60.0%
GGTCATCGACCTCTGGTGCT+AGG + chr4.3:4501654-4501673 None:intergenic 60.0%
TCAGTGCAGGGGACCTCCTT+TGG + chr4.3:4502499-4502518 None:intergenic 60.0%
CAGGGGAAGAATGTCGGGCC+AGG - chr4.3:4502242-4502261 MS.gene55805:CDS 65.0%
TCCTGGGATGGGAGAGACGG+TGG - chr4.3:4501081-4501100 MS.gene55805:intron 65.0%
! GCCGATGTAACCGGCTCCAC+CGG + chr4.3:4500671-4500690 None:intergenic 65.0%
GCCACCGTCTCTCCCATCCC+AGG + chr4.3:4501085-4501104 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 4500643 4504429 4500643 ID=MS.gene55805
chr4.3 mRNA 4500643 4504429 4500643 ID=MS.gene55805.t1;Parent=MS.gene55805
chr4.3 exon 4504244 4504429 4504244 ID=MS.gene55805.t1.exon1;Parent=MS.gene55805.t1
chr4.3 CDS 4504244 4504429 4504244 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4503142 4503191 4503142 ID=MS.gene55805.t1.exon2;Parent=MS.gene55805.t1
chr4.3 CDS 4503142 4503191 4503142 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4502865 4503000 4502865 ID=MS.gene55805.t1.exon3;Parent=MS.gene55805.t1
chr4.3 CDS 4502865 4503000 4502865 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4502511 4502612 4502511 ID=MS.gene55805.t1.exon4;Parent=MS.gene55805.t1
chr4.3 CDS 4502511 4502612 4502511 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4502126 4502353 4502126 ID=MS.gene55805.t1.exon5;Parent=MS.gene55805.t1
chr4.3 CDS 4502126 4502353 4502126 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4501794 4501872 4501794 ID=MS.gene55805.t1.exon6;Parent=MS.gene55805.t1
chr4.3 CDS 4501794 4501872 4501794 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4501534 4501616 4501534 ID=MS.gene55805.t1.exon7;Parent=MS.gene55805.t1
chr4.3 CDS 4501534 4501616 4501534 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4500943 4501034 4500943 ID=MS.gene55805.t1.exon8;Parent=MS.gene55805.t1
chr4.3 CDS 4500943 4501034 4500943 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
chr4.3 exon 4500643 4500730 4500643 ID=MS.gene55805.t1.exon9;Parent=MS.gene55805.t1
chr4.3 CDS 4500643 4500730 4500643 ID=cds.MS.gene55805.t1;Parent=MS.gene55805.t1
Gene Sequence

>MS.gene55805

ATGTCAAACAAAACCATTCTGGTTACCGGTGGAGCCGGTTACATCGGCAGCCATACAGTCCTCCAGCTTCTTCTTGGCGGTTACAAAGTCGTCGTGGTGGATAACCTTGATAATTCTTCTCAAATATCCATCGACAGAGTCAAGAAACTCGCCGGTGATTTCGCCGGTAACCTTTCCTTTCATAAGGTGCGCGGCACATTCTCTCGTTGCTCTACCATTTTCAATTCTTTATTTCTCTCTGTCTGTTTTTAATTAATTAGTTAGTAAATAATGATTTGGTTGTACTGTCTTTATGATTTGATAATTATTTTTTATTTTGCCGAACATGGTGATTTTGTATTTTAAAAAAAAATGTTTTACAGTGTTTTTTATTGGGTTTTATTAAATTATTTTCAAGTGGACCCAACCAAAAGGGTAAAATTGAAAGAAGGGTATTATTCCTGGGATGGGAGAGACGGTGGCAGATTCGAATAATATGTGTGTGTTGTGTGTGAATAATAATTGGGAGCTGAGTCTGTTTCACAATTGGCCCGACAAGTACATAACATGCTTTTTGATGGGATGTTTGTTTTGTTTATTTCGTTACTACTAGATCCAATCTGGCTTTTTTTTGGTGATATTGCAATTTTGTTGAAATTCTAAACTGTACTGTAGTTTTCAAAGTGAATTTGAAAAGAAAAAAAAAACTTAAATAAGTGTTTATGGGATAAATAAATAATTATTGTATTATTCAAAATGTATTTGAATTATTTTTTGTAAGGAGTTGAAAAAATAGCTTATTTTTTGACGTTTCATAAAAATAGCTGAAAACAACATATAAATTACAATATTAGCTGCAATAGACATTGATAAAGTATTTCACCTTATTGAATACAAAATATATTTAATAGTTTTTCACTAGGTGGGTACAAGGGAAACTTGTATGTGTGGACATGACTGGTTTCTCCCTTGTCCGATAGAAGATTGGGGCTTTTATAAATTCATTTTTACGTTCGATACTTTTGGTTTCCTAGCACCAGAGGTCGATGACCTCTTAAAAAGATTTCAAAGAGTCACGCATAAAAATATCATGTCCTCTAAGTTCATAAATATTGTATTTAAGAATTGATTTTGTCATCCGAAAAGGATTAGTGGCACAATTTGTTGTCCGTTTGCCTTCCATATTTTATTGTGATGATGACCGACATATTTATTGTGATGATGACCGACATATTTTATTTTACTTCTTCACATTGCAGTTAGACCTGCGGGACAGAGATGGACTTGAGAAAATATTTTCTTCCACAAAGTAAGGATTGTGCATAAGCTTTTGTGATTTTTCTTTTATACAAAAGATTGCACACATTTCAATTTCAAGTTCTCTTGCAATTTCATTTGATCACTGATTTATAAATGTTTGATGTATATGTATATGTATATTTCCTTTCAGATTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAGAAACCACTGCTCTACTATGACAACAACTTGATTGGGACAATTGTTCTATTTGAAGTCATGGCTGCCCATGGATGCAAGAAGGTAACTTCATTTTAGCTTTAAGTCCTGAATCTTGCAGGGGAAGAATGTCGGGCCAGGTCATATAGACTGAGTACTTGTAGTGGGAAATGATTCAAAAGATTCAGAAGTTTCATCATAAGATACTATAAGATATAGTCTAGATATTTTCTTCTTCAAGTGCCCTGATAATACTGCTACCTTAAAGTGTCTTGTGAGATTGGTTGTTGCGATTTTGTTACTTAACATGATTCTGTATTTCTTGATTGATTTCAGCTTGTGTTCTCCTCTTCAGCCACTGTATACGGTTGGCCAAAGGAGGTCCCCTGCACTGAAGAGTTTCCTTTATCAGCTGCAAGCCCGTATGGACGAACCAAGGTATGACTAGAGAACTATTTAGGGTACTTATCGGATACTTGGGTAGGGATAGTGAAACAAGAATTCCCTTTGCAATCTTGTTTATATTTTGGTTGTATATTACAGATTACAGATGTATCCTATCAGAATCTAACGAGAGTTTTTTTTTTCCTTTCAGCTATACATTGAAGAAATTTGTCGTGATATCTACCGTTCTGATCCAGGATGGAAAATAACACTGTTGAGATACTTCAACCCCGTTGGTGCACATCCTAGTGGTCATATTGGTGAGGATCCTCGCGGAATTCCCAACAACCTCATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCTCTGCATTGACAGTTTTTGGAACAGATTATAGCACAAGTGATGGAACTGGAGTATGTTTTCTTTGTTCTTGACTTGATTTACTGAAATTTTGACTTGGAAAGTTGCATGCTAAGCTCACACACTATCCACTATTTCCCTTCGATTTGGATTATTTTGATAATAATGCTGTCACAGTTGGTCCATTCTTACATGCGTAATTCCCATTTGTTAAGATCTACCTTTGAATTCTTTTGAGGATCTTACATTTTTTTTTTCCGATAAGCTTTTGAGGATCTTACATGATAAATCTTGTCTTTTTCTCAGGTCCGTGATTACATTCATGTTGTTGATTTAGCTGATGGGCACATTGCTGCATTGTGTAAGCTAGATGATCCTAAGACAGGTACTATTTGAAATTTGATCAAATTCTTCTAATAATTTATTCAGTCTATTCATTTTGGTAGACTCCTTGACGGTAGCAATGGTTGTGAACTGATGTTGGATTCCCATAATCAATGAGAGTTGTTTTTTCTTTGGTGCGTTTTTGGATTTTCACTTTTATGTGATGTTGCACATACAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTACAGCTTTTGAACAGGCCTCTCGAAAGGTAACAGACTGATGATTCTATTTATGATCCTTTTTATTTTGCTATCCCTTACTCTCATTTTTAATCATTTTATAAATGTCATTTGATGGTCTCTTTAAGTTGATATAGCATAAGGACTTGGCTTAGTGTTAAGATAATCATTTATGATAGCTCTTAAAGTTGTGTTCAACTTATTTCCATTACGTGAGTTGTAAGTAAACTATAAAAATCTTTCACTTTGACCCTAAGATAGATGATTTTTTAAATATTATGGGATATCCAACAAGGTCAATTGTATTTTTATAAGATATACAATGAAATGAAAAAATTAATGTGAAACAAGTTCATTGACACAACATGTGCAAAATGCGTCGGCAAAGAAACATCTGATCTTTCTATTCAACTGTTATTCAGTTCCATAGCTGAACATATTGACAAACTAATTTATTTATAGTCAAATTAAGCTATTGTTTAGTACATGACTAATTAATTTATACATTTTTTTTTTTTTACTATTTAGAAAATTCCAATTGTAAAGGCTGATCGGAGACCAGGAGATGCTGAAGTTGTTTATGCATCAACAGAAAAAGCAGCAAAAGAACTTAACTGGAAGTAAGTGTGGATTTTCTCAAGCGAATGCTTTCGTGATATTTAGTTGTTCTTAAAACTCTCCTTTCTGTTTATTCAATTCTTTTTATGGAAATTCAATGTTTTTGGTGTCTCCAAATTTTGCAAATATTATATCTTCTGATCAGAAATGTGGGCAAGTTTTCTTGAGTTAATTGTTTTCCCCTTTTCCTCACAAATTTATGTTCCTTGTGCAGGGCTAAATATGGCATTGATGATATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGAATCTGAAGAGTGA
Protein sequence

>MS.gene55805.t1

MSNKTILVTGGAGYIGSHTVLQLLLGGYKVVVVDNLDNSSQISIDRVKKLAGDFAGNLSFHKLDLRDRDGLEKIFSSTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAASPYGRTKLYIEEICRDIYRSDPGWKITLLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRSALTVFGTDYSTSDGTGVRDYIHVVDLADGHIAALCKLDDPKTGCEVYNLGTGKGTSVLEMVTAFEQASRKKIPIVKADRRPGDAEVVYASTEKAAKELNWKAKYGIDDMCRDQWNWASKNPYGYGESEE