Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058777.t1 | XP_003590923.2 | 71.5 | 519 | 11 | 1 | 1 | 382 | 1 | 519 | 1.20E-175 | 625.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058777.t1 | Q9ZPJ8 | 56.2 | 509 | 81 | 6 | 2 | 369 | 4 | 511 | 2.2e-125 | 450.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058777.t1 | G7I667 | 71.5 | 519 | 11 | 1 | 1 | 382 | 1 | 519 | 8.7e-176 | 625.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058774 | MS.gene058777 | 0.97265 | 4.11E-135 | -1.69E-46 |
| MS.gene058775 | MS.gene058777 | 0.991049 | 1.24E-185 | -1.69E-46 |
| MS.gene058777 | MS.gene071900 | 0.840553 | 8.11E-58 | -1.69E-46 |
| MS.gene058777 | MS.gene071901 | 0.812574 | 3.96E-51 | -1.69E-46 |
| MS.gene058777 | MS.gene072871 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene058777 | MS.gene07605 | 0.830427 | 2.96E-55 | -1.69E-46 |
| MS.gene058777 | MS.gene35779 | 0.808432 | 3.11E-50 | -1.69E-46 |
| MS.gene058777 | MS.gene45736 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene058777 | MS.gene48012 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene058777 | MS.gene53614 | 0.806634 | 7.48E-50 | -1.69E-46 |
| MS.gene058777 | MS.gene74897 | 0.800251 | 1.57E-48 | -1.69E-46 |
| MS.gene058777 | MS.gene80234 | 0.809601 | 1.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058777.t1 | MTR_1g079760 | 96.203 | 237 | 9 | 0 | 146 | 382 | 283 | 519 | 1.35e-155 | 448 |
| MS.gene058777.t1 | MTR_1g079760 | 98.621 | 145 | 2 | 0 | 1 | 145 | 1 | 145 | 6.55e-86 | 270 |
| MS.gene058777.t1 | MTR_1g045550 | 54.651 | 344 | 128 | 8 | 50 | 369 | 161 | 500 | 6.56e-111 | 333 |
| MS.gene058777.t1 | MTR_1g045550 | 70.548 | 146 | 42 | 1 | 1 | 145 | 1 | 146 | 2.46e-60 | 203 |
| MS.gene058777.t1 | MTR_7g098930 | 70.616 | 211 | 60 | 1 | 144 | 352 | 277 | 487 | 6.12e-95 | 292 |
| MS.gene058777.t1 | MTR_7g098930 | 75.862 | 145 | 35 | 0 | 1 | 145 | 1 | 145 | 2.57e-71 | 231 |
| MS.gene058777.t1 | MTR_7g113340 | 67.606 | 213 | 67 | 1 | 140 | 350 | 273 | 485 | 8.46e-91 | 281 |
| MS.gene058777.t1 | MTR_7g113340 | 58.079 | 229 | 82 | 5 | 1 | 221 | 1 | 223 | 8.94e-70 | 227 |
| MS.gene058777.t1 | MTR_3g463730 | 66.995 | 203 | 63 | 1 | 149 | 347 | 246 | 448 | 8.73e-87 | 270 |
| MS.gene058777.t1 | MTR_3g463730 | 67.925 | 106 | 33 | 1 | 40 | 145 | 7 | 111 | 1.45e-38 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058777.t1 | AT1G64780 | 76.786 | 224 | 50 | 2 | 147 | 369 | 289 | 511 | 8.62e-122 | 362 |
| MS.gene058777.t1 | AT1G64780 | 75.333 | 150 | 31 | 3 | 2 | 145 | 4 | 153 | 2.30e-61 | 206 |
| MS.gene058777.t1 | AT4G13510 | 68.936 | 235 | 65 | 5 | 145 | 377 | 273 | 501 | 2.07e-107 | 325 |
| MS.gene058777.t1 | AT4G13510 | 78.169 | 142 | 29 | 1 | 4 | 145 | 1 | 140 | 1.46e-67 | 222 |
| MS.gene058777.t1 | AT3G24300 | 67.105 | 228 | 64 | 2 | 144 | 369 | 276 | 494 | 2.17e-103 | 314 |
| MS.gene058777.t1 | AT3G24300 | 77.622 | 143 | 30 | 1 | 3 | 145 | 4 | 144 | 4.98e-68 | 223 |
| MS.gene058777.t1 | AT3G24290 | 72.195 | 205 | 55 | 1 | 144 | 346 | 275 | 479 | 7.61e-101 | 308 |
| MS.gene058777.t1 | AT3G24290 | 75.524 | 143 | 33 | 1 | 3 | 145 | 4 | 144 | 1.00e-65 | 217 |
| MS.gene058777.t1 | AT4G28700 | 65.801 | 231 | 72 | 3 | 138 | 364 | 277 | 504 | 1.18e-90 | 282 |
| MS.gene058777.t1 | AT4G28700 | 73.469 | 147 | 36 | 1 | 2 | 145 | 3 | 149 | 4.14e-66 | 218 |
Find 141 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGTTGATGAGATTTA+TGG | 0.173966 | 1.4:-64668971 | MS.gene058777:CDS |
| GACGAGTCTATTAGGAAATT+AGG | 0.214176 | 1.4:-64668722 | MS.gene058777:CDS |
| TTTGATTGGGCTTAATAAAT+TGG | 0.218891 | 1.4:-64669092 | MS.gene058777:CDS |
| GCTTAATAAATTGGCGATTA+AGG | 0.220724 | 1.4:-64669083 | MS.gene058777:CDS |
| GGCCTCTCCTACTATCTATT+TGG | 0.247116 | 1.4:-64669890 | MS.gene058777:CDS |
| TTTGGCTTTGCTTTCGCCTT+TGG | 0.288902 | 1.4:-64669872 | MS.gene058777:CDS |
| TATGGTCAATGGAGTGCTAT+TGG | 0.333213 | 1.4:-64669313 | MS.gene058777:CDS |
| AAGGGATTACCCTTCACCTT+CGG | 0.337397 | 1.4:-64669807 | MS.gene058777:CDS |
| AGGGAGGTTGTTTGCGGCGC+AGG | 0.338172 | 1.4:-64668912 | MS.gene058777:CDS |
| CACGGAGGGTGTGGCGCATG+GGG | 0.339247 | 1.4:-64669025 | MS.gene058777:CDS |
| AGGAAGATGACGAGTCTATT+AGG | 0.343254 | 1.4:-64668730 | MS.gene058777:CDS |
| ACGAGTCTATTAGGAAATTA+GGG | 0.347347 | 1.4:-64668721 | MS.gene058777:CDS |
| TGTAACTGCGCAGCCTCTAA+TGG | 0.347657 | 1.4:+64669046 | None:intergenic |
| AGGGATTACCCTTCACCTTC+GGG | 0.348884 | 1.4:-64669806 | MS.gene058777:CDS |
| GTTGAGGTGCTGGTTATTTG+TGG | 0.363153 | 1.4:-64668887 | MS.gene058777:CDS |
| TTGCGGTGGTGGTGAGGAGT+GGG | 0.375025 | 1.4:+64670131 | None:intergenic |
| TGCAACGGCGGTTGCGTTTG+CGG | 0.376248 | 1.4:+64670114 | None:intergenic |
| TTGAGGTGCTGGTTATTTGT+GGG | 0.377948 | 1.4:-64668886 | MS.gene058777:CDS |
| AGTATGTTGATGAGATTTAT+GGG | 0.378337 | 1.4:-64668970 | MS.gene058777:CDS |
| GGCGGTTGCGTTTGCGGTGG+TGG | 0.380612 | 1.4:+64670120 | None:intergenic |
| TGGTGGTGAGGAGTGGGGCT+AGG | 0.382794 | 1.4:+64670137 | None:intergenic |
| ATTTGAGATGGTGTTGAATT+GGG | 0.384973 | 1.4:+64670078 | None:intergenic |
| ACACGGAGGGTGTGGCGCAT+GGG | 0.388550 | 1.4:-64669026 | MS.gene058777:CDS |
| GTAACAAAAGGGAATTATTA+TGG | 0.390932 | 1.4:-64669331 | MS.gene058777:intron |
| TTTAGTAAACGGTTATTAGT+TGG | 0.394285 | 1.4:-64669235 | MS.gene058777:CDS |
| TACACGGAGGGTGTGGCGCA+TGG | 0.398795 | 1.4:-64669027 | MS.gene058777:CDS |
| TATTTGAGATGGTGTTGAAT+TGG | 0.400022 | 1.4:+64670077 | None:intergenic |
| TGACAACTTTGTTTAGTAAA+CGG | 0.402627 | 1.4:-64669246 | MS.gene058777:CDS |
| GGCGCAGGTGGTTGAGGTGC+TGG | 0.412619 | 1.4:-64668897 | MS.gene058777:CDS |
| TTGATGAGATTTATGGGATA+GGG | 0.415705 | 1.4:-64668964 | MS.gene058777:CDS |
| CGGAGGGTGTGGCGCATGGG+GGG | 0.418635 | 1.4:-64669023 | MS.gene058777:CDS |
| ACGGAGGGTGTGGCGCATGG+GGG | 0.428519 | 1.4:-64669024 | MS.gene058777:CDS |
| TGGAGTGCTATTGGAAGAAC+AGG | 0.430989 | 1.4:-64669304 | MS.gene058777:CDS |
| TGTTGATGGGTGGTGGAGGG+AGG | 0.437827 | 1.4:-64668928 | MS.gene058777:CDS |
| AGGTGCTGGTTATTTGTGGG+TGG | 0.439612 | 1.4:-64668883 | MS.gene058777:CDS |
| GGTGCTGGTTATTTGTGGGT+GGG | 0.440274 | 1.4:-64668882 | MS.gene058777:CDS |
| CAGCGATGGCGAAGGCCCAT+TGG | 0.442094 | 1.4:+64669762 | None:intergenic |
| GGATTGTTGATGGGTGGTGG+AGG | 0.443117 | 1.4:-64668932 | MS.gene058777:CDS |
| GTTGATGAGATTTATGGGAT+AGG | 0.452271 | 1.4:-64668965 | MS.gene058777:CDS |
| CACACTGAAGGTGCACTGAT+TGG | 0.453333 | 1.4:+64668629 | None:intergenic |
| GGTTTCGCCATGCTCTGCGC+AGG | 0.454596 | 1.4:-64669977 | MS.gene058777:CDS |
| AAGGGAATTATTATGGTCAA+TGG | 0.457717 | 1.4:-64669324 | MS.gene058777:CDS |
| GCCTTCGCCATCGCTGCTGC+CGG | 0.459814 | 1.4:-64669755 | MS.gene058777:intron |
| GCACCCTCCAACGGCTTCAT+CGG | 0.461259 | 1.4:-64669848 | MS.gene058777:CDS |
| TAGGAAATTAGGGTTTATGA+TGG | 0.464007 | 1.4:-64668711 | MS.gene058777:CDS |
| GATTGTTGATGGGTGGTGGA+GGG | 0.464090 | 1.4:-64668931 | MS.gene058777:CDS |
| TATGGATTGTTGATGGGTGG+TGG | 0.466509 | 1.4:-64668935 | MS.gene058777:CDS |
| GTTTGCGGCGCAGGTGGTTG+AGG | 0.472995 | 1.4:-64668903 | MS.gene058777:CDS |
| TGGTGGAGGGAGGTTGTTTG+CGG | 0.475634 | 1.4:-64668918 | MS.gene058777:CDS |
| CTAAATAAGCTGAGAAGAGA+AGG | 0.476158 | 1.4:+64670017 | None:intergenic |
| GTGTGGGTTTGTTGCGGCGT+GGG | 0.479169 | 1.4:-64669116 | MS.gene058777:CDS |
| GTTGTTCTGTTGTGGAACCA+TGG | 0.481083 | 1.4:-64669150 | MS.gene058777:CDS |
| GTCGCTGAGTTTATTTGAGA+TGG | 0.491035 | 1.4:+64670066 | None:intergenic |
| TTTACGGGATTGTTTGCAAA+GGG | 0.491383 | 1.4:-64668995 | MS.gene058777:CDS |
| GAAGTATGATGATCCATTAG+AGG | 0.491623 | 1.4:-64669059 | MS.gene058777:CDS |
| GAGGAGTGGGGCTAGGTCTG+TGG | 0.495166 | 1.4:+64670144 | None:intergenic |
| TTTGCGGTGGTGGTGAGGAG+TGG | 0.496837 | 1.4:+64670130 | None:intergenic |
| ACAGCTTCTTTCTCTACCAA+TGG | 0.497981 | 1.4:-64669778 | MS.gene058777:CDS |
| GCCGTTGGAGGGTGCTCCAA+AGG | 0.499692 | 1.4:+64669856 | None:intergenic |
| CCATGGGCCGCGATTGTGTG+TGG | 0.504024 | 1.4:-64669133 | MS.gene058777:CDS |
| ATTGGTGAGCATGATGTTCA+TGG | 0.505916 | 1.4:+64669934 | None:intergenic |
| GAGGTTGTTTGCGGCGCAGG+TGG | 0.508529 | 1.4:-64668909 | MS.gene058777:CDS |
| TCGAGGGATGATGAGACTGC+AGG | 0.509046 | 1.4:-64668800 | MS.gene058777:CDS |
| AGCAAAGCCAAATAGATAGT+AGG | 0.509496 | 1.4:+64669883 | None:intergenic |
| GACGTGTGTAATGGTTTACT+TGG | 0.510713 | 1.4:-64669196 | MS.gene058777:CDS |
| CCACCCATCAACAATCCATA+TGG | 0.510810 | 1.4:+64668938 | None:intergenic |
| TGGCACCGACGTATCGTGTT+CGG | 0.511058 | 1.4:+64668649 | None:intergenic |
| GAGGCCATATGGATTGTTGA+TGG | 0.511702 | 1.4:-64668942 | MS.gene058777:CDS |
| TACGGGATTGTTTGCAAAGG+GGG | 0.512801 | 1.4:-64668993 | MS.gene058777:CDS |
| TATGGGATAGGGAGGCCATA+TGG | 0.515597 | 1.4:-64668953 | MS.gene058777:CDS |
| AACGGAGCCTGCGCAGAGCA+TGG | 0.515746 | 1.4:+64669970 | None:intergenic |
| CAGCTTCTTTCTCTACCAAT+GGG | 0.516999 | 1.4:-64669777 | MS.gene058777:CDS |
| AACTGCAGGTTGTTCTGTTG+TGG | 0.517299 | 1.4:-64669158 | MS.gene058777:CDS |
| AATTAGGGTTTATGATGGGT+AGG | 0.517824 | 1.4:-64668706 | MS.gene058777:CDS |
| GCGGCCGATGAAGCCGTTGG+AGG | 0.520644 | 1.4:+64669844 | None:intergenic |
| CGTATCGTGTTCGGTGGCAG+AGG | 0.523564 | 1.4:+64668658 | None:intergenic |
| CGGCCGATGAAGCCGTTGGA+GGG | 0.527370 | 1.4:+64669845 | None:intergenic |
| AATGTCCTCGACGCTGCAGC+CGG | 0.530902 | 1.4:-64669914 | MS.gene058777:CDS |
| GGTGTCACAACAACACTGGC+TGG | 0.534256 | 1.4:-64669283 | MS.gene058777:CDS |
| GCGCAGTTACACGGAGGGTG+TGG | 0.537438 | 1.4:-64669034 | MS.gene058777:CDS |
| GAGGGAGACACACTCATGGC+CGG | 0.540366 | 1.4:+64668677 | None:intergenic |
| GCCTTTGGAGCACCCTCCAA+CGG | 0.540428 | 1.4:-64669857 | MS.gene058777:CDS |
| AACGTCATTGACGTGTGTAA+TGG | 0.544203 | 1.4:-64669205 | MS.gene058777:CDS |
| CTGTAGTCACCCGAAGGTGA+AGG | 0.551464 | 1.4:+64669797 | None:intergenic |
| TATGATGGGTAGGATTGAGC+CGG | 0.553940 | 1.4:-64668696 | MS.gene058777:CDS |
| GTCCTCGACGCTGCAGCCGG+TGG | 0.554837 | 1.4:-64669911 | MS.gene058777:CDS |
| GTGTGTAATGGTTTACTTGG+CGG | 0.557557 | 1.4:-64669193 | MS.gene058777:CDS |
| GCATAGGTAGTCTGCAACGG+CGG | 0.557659 | 1.4:+64670102 | None:intergenic |
| GGATGATGAGACTGCAGGGA+TGG | 0.557751 | 1.4:-64668795 | MS.gene058777:CDS |
| GTTTACGGGATTGTTTGCAA+AGG | 0.562175 | 1.4:-64668996 | MS.gene058777:CDS |
| ACCGGCAGCAGCGATGGCGA+AGG | 0.564745 | 1.4:+64669754 | None:intergenic |
| ATAAGCTGAGAAGAGAAGGT+AGG | 0.565446 | 1.4:+64670021 | None:intergenic |
| TGAAATTGTTGAGGATATCG+AGG | 0.567161 | 1.4:-64668817 | MS.gene058777:CDS |
| GTGGCGGCCGATGAAGCCGT+TGG | 0.567324 | 1.4:+64669841 | None:intergenic |
| CCATATGGATTGTTGATGGG+TGG | 0.567763 | 1.4:-64668938 | MS.gene058777:CDS |
| TTATTCAGCCCATAAAATAA+CGG | 0.567889 | 1.4:+64668842 | None:intergenic |
| AACGGTTATTAGTTGGACAC+TGG | 0.568051 | 1.4:-64669228 | MS.gene058777:CDS |
| AGGCCATATGGATTGTTGAT+GGG | 0.568103 | 1.4:-64668941 | MS.gene058777:CDS |
| TGGTGTTGAATTGGGTGCAT+AGG | 0.570282 | 1.4:+64670086 | None:intergenic |
| TTAGTCTTTGCCATGCAGCT+CGG | 0.570620 | 1.4:-64669998 | MS.gene058777:CDS |
| CATGGCGAAACCGAGCTGCA+TGG | 0.571462 | 1.4:+64669988 | None:intergenic |
| AGTGATACCGGCAGCAGCGA+TGG | 0.573055 | 1.4:+64669748 | None:intergenic |
| GGCTGCAGCGTCGAGGACAT+TGG | 0.575668 | 1.4:+64669916 | None:intergenic |
| TTGTTCTGTTGTGGAACCAT+GGG | 0.576456 | 1.4:-64669149 | MS.gene058777:CDS |
| TTAGAGGCTGCGCAGTTACA+CGG | 0.582164 | 1.4:-64669043 | MS.gene058777:CDS |
| TGTAGTCACCCGAAGGTGAA+GGG | 0.585601 | 1.4:+64669798 | None:intergenic |
| CATGGGCCGCGATTGTGTGT+GGG | 0.586850 | 1.4:-64669132 | MS.gene058777:CDS |
| CGAGGGATGATGAGACTGCA+GGG | 0.589259 | 1.4:-64668799 | MS.gene058777:CDS |
| GTAGGTGTTGTCTATTGCAT+AGG | 0.590077 | 1.4:+64670039 | None:intergenic |
| TGAATAAGATGAAATTGTTG+AGG | 0.592343 | 1.4:-64668826 | MS.gene058777:CDS |
| AAATAACGGCACCATCGTGA+CGG | 0.592498 | 1.4:+64668856 | None:intergenic |
| AGGAAATTAGGGTTTATGAT+GGG | 0.592652 | 1.4:-64668710 | MS.gene058777:CDS |
| AACAAACCCACACACAATCG+CGG | 0.593035 | 1.4:+64669126 | None:intergenic |
| GGTGTTGTCTATTGCATAGG+TGG | 0.593690 | 1.4:+64670042 | None:intergenic |
| TTGCGTTTGCGGTGGTGGTG+AGG | 0.596669 | 1.4:+64670125 | None:intergenic |
| TGCGGTGGTGGTGAGGAGTG+GGG | 0.601876 | 1.4:+64670132 | None:intergenic |
| GGCAGAGGGAGACACACTCA+TGG | 0.604115 | 1.4:+64668673 | None:intergenic |
| CCACACACAATCGCGGCCCA+TGG | 0.607906 | 1.4:+64669133 | None:intergenic |
| AGCCAAATAGATAGTAGGAG+AGG | 0.608112 | 1.4:+64669888 | None:intergenic |
| ATGAGATTTATGGGATAGGG+AGG | 0.617665 | 1.4:-64668961 | MS.gene058777:CDS |
| TGTGTGGGTTTGTTGCGGCG+TGG | 0.623345 | 1.4:-64669117 | MS.gene058777:CDS |
| TGGACTTGACTAGACATGGT+GGG | 0.625359 | 1.4:-64668775 | MS.gene058777:CDS |
| GATTGTGTGTGGGTTTGTTG+CGG | 0.627273 | 1.4:-64669122 | MS.gene058777:CDS |
| GGTGCATAGGTAGTCTGCAA+CGG | 0.633576 | 1.4:+64670099 | None:intergenic |
| GAAATTGTTGAGGATATCGA+GGG | 0.633706 | 1.4:-64668816 | MS.gene058777:CDS |
| AACAGGTGTCACAACAACAC+TGG | 0.637368 | 1.4:-64669287 | MS.gene058777:CDS |
| CACCGACGTATCGTGTTCGG+TGG | 0.638372 | 1.4:+64668652 | None:intergenic |
| GTATCGTGTTCGGTGGCAGA+GGG | 0.638569 | 1.4:+64668659 | None:intergenic |
| AACGGCGGTTGCGTTTGCGG+TGG | 0.642746 | 1.4:+64670117 | None:intergenic |
| TGCTTATGCGTATCATGACG+AGG | 0.643185 | 1.4:-64668750 | MS.gene058777:CDS |
| GGCCACCGGCTGCAGCGTCG+AGG | 0.648352 | 1.4:+64669909 | None:intergenic |
| TAGATAGTAGGAGAGGCCAC+CGG | 0.654386 | 1.4:+64669895 | None:intergenic |
| AAGTGATGATATCACACTGA+AGG | 0.666643 | 1.4:+64668617 | None:intergenic |
| AAGAAGCTGTAGTCACCCGA+AGG | 0.668205 | 1.4:+64669791 | None:intergenic |
| AGGCTGCGCAGTTACACGGA+GGG | 0.669758 | 1.4:-64669039 | MS.gene058777:CDS |
| TGGGTGGGTTACCGTCACGA+TGG | 0.684596 | 1.4:-64668867 | MS.gene058777:CDS |
| GGGATGGACTTGACTAGACA+TGG | 0.695287 | 1.4:-64668779 | MS.gene058777:CDS |
| ATGGACTTGACTAGACATGG+TGG | 0.698702 | 1.4:-64668776 | MS.gene058777:CDS |
| TGCCACCGAACACGATACGT+CGG | 0.704524 | 1.4:-64668654 | MS.gene058777:CDS |
| TTACGGGATTGTTTGCAAAG+GGG | 0.721445 | 1.4:-64668994 | MS.gene058777:CDS |
| GAGGCTGCGCAGTTACACGG+AGG | 0.735378 | 1.4:-64669040 | MS.gene058777:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTCTTCTTTTTTAAC+CGG | - | chr1.4:64669111-64669130 | MS.gene058777:CDS | 15.0% |
| !! | AAAAGAAGAATATATGAGAT+AGG | + | chr1.4:64669106-64669125 | None:intergenic | 20.0% |
| !! | TGCAATTATTAAAAATGAAC+CGG | + | chr1.4:64669424-64669443 | None:intergenic | 20.0% |
| !! | TTAATAATTGCAAAAAGCTA+TGG | - | chr1.4:64669432-64669451 | MS.gene058777:intron | 20.0% |
| ! | ATGGAAATATGAGTAACAAA+AGG | - | chr1.4:64669451-64669470 | MS.gene058777:intron | 25.0% |
| ! | CAATTATTAAAAATGAACCG+GGG | + | chr1.4:64669422-64669441 | None:intergenic | 25.0% |
| ! | GCAATTATTAAAAATGAACC+GGG | + | chr1.4:64669423-64669442 | None:intergenic | 25.0% |
| ! | GTAACAAAAGGGAATTATTA+TGG | - | chr1.4:64669463-64669482 | MS.gene058777:intron | 25.0% |
| ! | TGAATAAGATGAAATTGTTG+AGG | - | chr1.4:64669968-64669987 | MS.gene058777:CDS | 25.0% |
| ! | TGGAAATATGAGTAACAAAA+GGG | - | chr1.4:64669452-64669471 | MS.gene058777:intron | 25.0% |
| ! | TTATTCAGCCCATAAAATAA+CGG | + | chr1.4:64669955-64669974 | None:intergenic | 25.0% |
| ! | TTTAGTAAACGGTTATTAGT+TGG | - | chr1.4:64669559-64669578 | MS.gene058777:intron | 25.0% |
| ! | TTTGATTGGGCTTAATAAAT+TGG | - | chr1.4:64669702-64669721 | MS.gene058777:intron | 25.0% |
| !! | AGTATGTTGATGAGATTTAT+GGG | - | chr1.4:64669824-64669843 | MS.gene058777:CDS | 25.0% |
| !! | TGACAACTTTGTTTAGTAAA+CGG | - | chr1.4:64669548-64669567 | MS.gene058777:intron | 25.0% |
| !!! | CTTTTTTATTATGGTTTGGT+TGG | - | chr1.4:64669385-64669404 | MS.gene058777:intron | 25.0% |
| !!! | GGTTCTTTTTTATTATGGTT+TGG | - | chr1.4:64669381-64669400 | MS.gene058777:intron | 25.0% |
| !!! | TGTTGGGTTCTTTTTTATTA+TGG | - | chr1.4:64669376-64669395 | MS.gene058777:intron | 25.0% |
| AAGGGAATTATTATGGTCAA+TGG | - | chr1.4:64669470-64669489 | MS.gene058777:intron | 30.0% | |
| ACGAGTCTATTAGGAAATTA+GGG | - | chr1.4:64670073-64670092 | MS.gene058777:CDS | 30.0% | |
| AGGAAATTAGGGTTTATGAT+GGG | - | chr1.4:64670084-64670103 | MS.gene058777:CDS | 30.0% | |
| GCTTAATAAATTGGCGATTA+AGG | - | chr1.4:64669711-64669730 | MS.gene058777:intron | 30.0% | |
| TAGGAAATTAGGGTTTATGA+TGG | - | chr1.4:64670083-64670102 | MS.gene058777:CDS | 30.0% | |
| TTATAGAAGGTCCTAGAATA+GGG | - | chr1.4:64669295-64669314 | MS.gene058777:CDS | 30.0% | |
| TTGATGAGATTTATGGGATA+GGG | - | chr1.4:64669830-64669849 | MS.gene058777:CDS | 30.0% | |
| TTTATAGAAGGTCCTAGAAT+AGG | - | chr1.4:64669294-64669313 | MS.gene058777:CDS | 30.0% | |
| ! | ATTTGAGATGGTGTTGAATT+GGG | + | chr1.4:64668719-64668738 | None:intergenic | 30.0% |
| ! | GAGTATGTTGATGAGATTTA+TGG | - | chr1.4:64669823-64669842 | MS.gene058777:CDS | 30.0% |
| ! | TATTTGAGATGGTGTTGAAT+TGG | + | chr1.4:64668720-64668739 | None:intergenic | 30.0% |
| !! | ACCAATGGTGATGTTTTATT+TGG | - | chr1.4:64669198-64669217 | MS.gene058777:CDS | 30.0% |
| !! | TTATTATGGTTTGGTTGGTA+CGG | - | chr1.4:64669390-64669409 | MS.gene058777:intron | 30.0% |
| !!! | CCAATGGTGATGTTTTATTT+GGG | - | chr1.4:64669199-64669218 | MS.gene058777:CDS | 30.0% |
| AAATTGAGTTCTCTCTGCAA+TGG | + | chr1.4:64669079-64669098 | None:intergenic | 35.0% | |
| AGCAAAGCCAAATAGATAGT+AGG | + | chr1.4:64668914-64668933 | None:intergenic | 35.0% | |
| CCCAAATAAAACATCACCAT+TGG | + | chr1.4:64669202-64669221 | None:intergenic | 35.0% | |
| CTAAATAAGCTGAGAAGAGA+AGG | + | chr1.4:64668780-64668799 | None:intergenic | 35.0% | |
| GAAATTGTTGAGGATATCGA+GGG | - | chr1.4:64669978-64669997 | MS.gene058777:CDS | 35.0% | |
| GAAGTATGATGATCCATTAG+AGG | - | chr1.4:64669735-64669754 | MS.gene058777:intron | 35.0% | |
| GACGAGTCTATTAGGAAATT+AGG | - | chr1.4:64670072-64670091 | MS.gene058777:CDS | 35.0% | |
| TGAAATTGTTGAGGATATCG+AGG | - | chr1.4:64669977-64669996 | MS.gene058777:CDS | 35.0% | |
| TTTACGGGATTGTTTGCAAA+GGG | - | chr1.4:64669799-64669818 | MS.gene058777:CDS | 35.0% | |
| ! | CATGATGTTCATGGTGTTTT+TGG | + | chr1.4:64668854-64668873 | None:intergenic | 35.0% |
| ! | GTTGATGAGATTTATGGGAT+AGG | - | chr1.4:64669829-64669848 | MS.gene058777:CDS | 35.0% |
| !! | AATTAGGGTTTATGATGGGT+AGG | - | chr1.4:64670088-64670107 | MS.gene058777:CDS | 35.0% |
| !! | TATTATGGTTTGGTTGGTAC+GGG | - | chr1.4:64669391-64669410 | MS.gene058777:intron | 35.0% |
| AACGATGGGGTAAACAAAAC+CGG | + | chr1.4:64669133-64669152 | None:intergenic | 40.0% | |
| AACGGTTATTAGTTGGACAC+TGG | - | chr1.4:64669566-64669585 | MS.gene058777:intron | 40.0% | |
| AACGTCATTGACGTGTGTAA+TGG | - | chr1.4:64669589-64669608 | MS.gene058777:intron | 40.0% | |
| AATCCCTTAGACCGAAAAAG+TGG | + | chr1.4:64668975-64668994 | None:intergenic | 40.0% | |
| ACAGCTTCTTTCTCTACCAA+TGG | - | chr1.4:64669016-64669035 | MS.gene058777:CDS | 40.0% | |
| AGCCAAATAGATAGTAGGAG+AGG | + | chr1.4:64668909-64668928 | None:intergenic | 40.0% | |
| AGGAAGATGACGAGTCTATT+AGG | - | chr1.4:64670064-64670083 | MS.gene058777:CDS | 40.0% | |
| ATAAGCTGAGAAGAGAAGGT+AGG | + | chr1.4:64668776-64668795 | None:intergenic | 40.0% | |
| ATGAGATTTATGGGATAGGG+AGG | - | chr1.4:64669833-64669852 | MS.gene058777:CDS | 40.0% | |
| ATTGGTGAGCATGATGTTCA+TGG | + | chr1.4:64668863-64668882 | None:intergenic | 40.0% | |
| CAGCTTCTTTCTCTACCAAT+GGG | - | chr1.4:64669017-64669036 | MS.gene058777:CDS | 40.0% | |
| GACGTGTGTAATGGTTTACT+TGG | - | chr1.4:64669598-64669617 | MS.gene058777:intron | 40.0% | |
| GTCGCTGAGTTTATTTGAGA+TGG | + | chr1.4:64668731-64668750 | None:intergenic | 40.0% | |
| GTGTGTAATGGTTTACTTGG+CGG | - | chr1.4:64669601-64669620 | MS.gene058777:intron | 40.0% | |
| GTTTACGGGATTGTTTGCAA+AGG | - | chr1.4:64669798-64669817 | MS.gene058777:CDS | 40.0% | |
| TGCAGAGAGAACTCAATTTG+TGG | - | chr1.4:64669080-64669099 | MS.gene058777:CDS | 40.0% | |
| TTACGGGATTGTTTGCAAAG+GGG | - | chr1.4:64669800-64669819 | MS.gene058777:CDS | 40.0% | |
| TTGTTCTGTTGTGGAACCAT+GGG | - | chr1.4:64669645-64669664 | MS.gene058777:intron | 40.0% | |
| ! | AGGCCATATGGATTGTTGAT+GGG | - | chr1.4:64669853-64669872 | MS.gene058777:CDS | 40.0% |
| ! | GTAGGTGTTGTCTATTGCAT+AGG | + | chr1.4:64668758-64668777 | None:intergenic | 40.0% |
| ! | TATGGTCAATGGAGTGCTAT+TGG | - | chr1.4:64669481-64669500 | MS.gene058777:intron | 40.0% |
| !! | TTATGGGGGGCATTTATAGA+AGG | - | chr1.4:64669282-64669301 | MS.gene058777:CDS | 40.0% |
| !! | TTGAGGTGCTGGTTATTTGT+GGG | - | chr1.4:64669908-64669927 | MS.gene058777:CDS | 40.0% |
| !!! | ACGATGGTGCCGTTATTTTA+TGG | - | chr1.4:64669943-64669962 | MS.gene058777:CDS | 40.0% |
| !!! | CGATGGTGCCGTTATTTTAT+GGG | - | chr1.4:64669944-64669963 | MS.gene058777:CDS | 40.0% |
| !!! | GGTGATGTTTTATTTGGGTC+CGG | - | chr1.4:64669204-64669223 | MS.gene058777:CDS | 40.0% |
| AAACCCAATGCGAAACGATG+GGG | + | chr1.4:64669146-64669165 | None:intergenic | 45.0% | |
| AAATAACGGCACCATCGTGA+CGG | + | chr1.4:64669941-64669960 | None:intergenic | 45.0% | |
| AACAAACCCACACACAATCG+CGG | + | chr1.4:64669671-64669690 | None:intergenic | 45.0% | |
| AACTGCAGGTTGTTCTGTTG+TGG | - | chr1.4:64669636-64669655 | MS.gene058777:intron | 45.0% | |
| AAGGGATTACCCTTCACCTT+CGG | - | chr1.4:64668987-64669006 | MS.gene058777:CDS | 45.0% | |
| AATGGAGCCACTAGTGATAC+CGG | + | chr1.4:64669061-64669080 | None:intergenic | 45.0% | |
| ACCGGCAAAGTCAATAACAC+CGG | + | chr1.4:64669226-64669245 | None:intergenic | 45.0% | |
| ATGGACTTGACTAGACATGG+TGG | - | chr1.4:64670018-64670037 | MS.gene058777:CDS | 45.0% | |
| CAAACCCAATGCGAAACGAT+GGG | + | chr1.4:64669147-64669166 | None:intergenic | 45.0% | |
| CCACCCATCAACAATCCATA+TGG | + | chr1.4:64669859-64669878 | None:intergenic | 45.0% | |
| GGCCTCTCCTACTATCTATT+TGG | - | chr1.4:64668904-64668923 | MS.gene058777:CDS | 45.0% | |
| GTCCTTTCAATGCAACAGAC+CGG | + | chr1.4:64669338-64669357 | None:intergenic | 45.0% | |
| GTTGTTCTGTTGTGGAACCA+TGG | - | chr1.4:64669644-64669663 | MS.gene058777:intron | 45.0% | |
| TACGGGATTGTTTGCAAAGG+GGG | - | chr1.4:64669801-64669820 | MS.gene058777:CDS | 45.0% | |
| TAGAAGGTCCTAGAATAGGG+CGG | - | chr1.4:64669298-64669317 | MS.gene058777:CDS | 45.0% | |
| TGCTTATGCGTATCATGACG+AGG | - | chr1.4:64670044-64670063 | MS.gene058777:CDS | 45.0% | |
| TGGACTTGACTAGACATGGT+GGG | - | chr1.4:64670019-64670038 | MS.gene058777:CDS | 45.0% | |
| TTACCCCATCGTTTCGCATT+GGG | - | chr1.4:64669140-64669159 | MS.gene058777:CDS | 45.0% | |
| TTTACCCCATCGTTTCGCAT+TGG | - | chr1.4:64669139-64669158 | MS.gene058777:CDS | 45.0% | |
| ! | AACAGGTGTCACAACAACAC+TGG | - | chr1.4:64669507-64669526 | MS.gene058777:intron | 45.0% |
| ! | CCATATGGATTGTTGATGGG+TGG | - | chr1.4:64669856-64669875 | MS.gene058777:CDS | 45.0% |
| ! | GAGGCCATATGGATTGTTGA+TGG | - | chr1.4:64669852-64669871 | MS.gene058777:CDS | 45.0% |
| ! | GGTGTTGTCTATTGCATAGG+TGG | + | chr1.4:64668755-64668774 | None:intergenic | 45.0% |
| ! | GGTTTTGCTGCTATAACTGC+AGG | - | chr1.4:64669622-64669641 | MS.gene058777:intron | 45.0% |
| ! | TATGGATTGTTGATGGGTGG+TGG | - | chr1.4:64669859-64669878 | MS.gene058777:CDS | 45.0% |
| ! | TGGAGTGCTATTGGAAGAAC+AGG | - | chr1.4:64669490-64669509 | MS.gene058777:intron | 45.0% |
| ! | TGGTGTTGAATTGGGTGCAT+AGG | + | chr1.4:64668711-64668730 | None:intergenic | 45.0% |
| ! | TTAGTCTTTGCCATGCAGCT+CGG | - | chr1.4:64668796-64668815 | MS.gene058777:CDS | 45.0% |
| !! | GATTGTGTGTGGGTTTGTTG+CGG | - | chr1.4:64669672-64669691 | MS.gene058777:intron | 45.0% |
| !! | GTTATTGACTTTGCCGGTTC+AGG | - | chr1.4:64669228-64669247 | MS.gene058777:CDS | 45.0% |
| !! | GTTGAGGTGCTGGTTATTTG+TGG | - | chr1.4:64669907-64669926 | MS.gene058777:CDS | 45.0% |
| !! | TATGATGGGTAGGATTGAGC+CGG | - | chr1.4:64670098-64670117 | MS.gene058777:CDS | 45.0% |
| !! | TCCGGTGTTATTGACTTTGC+CGG | - | chr1.4:64669222-64669241 | MS.gene058777:CDS | 45.0% |
| !! | TTTGGCTTTGCTTTCGCCTT+TGG | - | chr1.4:64668922-64668941 | MS.gene058777:CDS | 45.0% |
| !!! | CATGGTGTTTTTGGCTCGAA+CGG | + | chr1.4:64668845-64668864 | None:intergenic | 45.0% |
| AAGAAGCTGTAGTCACCCGA+AGG | + | chr1.4:64669006-64669025 | None:intergenic | 50.0% | |
| AGGGATTACCCTTCACCTTC+GGG | - | chr1.4:64668988-64669007 | MS.gene058777:CDS | 50.0% | |
| CATGTGAACCACACCTGAAC+CGG | + | chr1.4:64669244-64669263 | None:intergenic | 50.0% | |
| CCAAACCCAATGCGAAACGA+TGG | + | chr1.4:64669148-64669167 | None:intergenic | 50.0% | |
| CCATCGTTTCGCATTGGGTT+TGG | - | chr1.4:64669145-64669164 | MS.gene058777:CDS | 50.0% | |
| CCCTTAGACCGAAAAAGTGG+CGG | + | chr1.4:64668972-64668991 | None:intergenic | 50.0% | |
| GGGTGGTATAGCAGGGTTAT+GGG | - | chr1.4:64669266-64669285 | MS.gene058777:CDS | 50.0% | |
| GGTGCATAGGTAGTCTGCAA+CGG | + | chr1.4:64668698-64668717 | None:intergenic | 50.0% | |
| GGTGGTATAGCAGGGTTATG+GGG | - | chr1.4:64669267-64669286 | MS.gene058777:CDS | 50.0% | |
| GTGGTATAGCAGGGTTATGG+GGG | - | chr1.4:64669268-64669287 | MS.gene058777:CDS | 50.0% | |
| TAGATAGTAGGAGAGGCCAC+CGG | + | chr1.4:64668902-64668921 | None:intergenic | 50.0% | |
| TATGGGATAGGGAGGCCATA+TGG | - | chr1.4:64669841-64669860 | MS.gene058777:CDS | 50.0% | |
| TCAGGTGTGGTTCACATGGT+GGG | - | chr1.4:64669246-64669265 | MS.gene058777:CDS | 50.0% | |
| TGGGTGGTATAGCAGGGTTA+TGG | - | chr1.4:64669265-64669284 | MS.gene058777:CDS | 50.0% | |
| TGGTATAGCAGGGTTATGGG+GGG | - | chr1.4:64669269-64669288 | MS.gene058777:CDS | 50.0% | |
| TGTAACTGCGCAGCCTCTAA+TGG | + | chr1.4:64669751-64669770 | None:intergenic | 50.0% | |
| TGTAGTCACCCGAAGGTGAA+GGG | + | chr1.4:64668999-64669018 | None:intergenic | 50.0% | |
| TTAGAGGCTGCGCAGTTACA+CGG | - | chr1.4:64669751-64669770 | MS.gene058777:intron | 50.0% | |
| TTCAGGTGTGGTTCACATGG+TGG | - | chr1.4:64669245-64669264 | MS.gene058777:CDS | 50.0% | |
| ! | CACACTGAAGGTGCACTGAT+TGG | + | chr1.4:64670168-64670187 | None:intergenic | 50.0% |
| ! | GGGATGGACTTGACTAGACA+TGG | - | chr1.4:64670015-64670034 | MS.gene058777:CDS | 50.0% |
| !! | ACATCACCATTGGTTCGCGT+TGG | + | chr1.4:64669192-64669211 | None:intergenic | 50.0% |
| !! | ACATGGTGGGTGGTATAGCA+GGG | - | chr1.4:64669259-64669278 | MS.gene058777:CDS | 50.0% |
| !! | AGGTGCTGGTTATTTGTGGG+TGG | - | chr1.4:64669911-64669930 | MS.gene058777:CDS | 50.0% |
| !! | CATCACCATTGGTTCGCGTT+GGG | + | chr1.4:64669191-64669210 | None:intergenic | 50.0% |
| !! | GATTGTTGATGGGTGGTGGA+GGG | - | chr1.4:64669863-64669882 | MS.gene058777:CDS | 50.0% |
| !! | GGTGCTGGTTATTTGTGGGT+GGG | - | chr1.4:64669912-64669931 | MS.gene058777:CDS | 50.0% |
| !!! | CCGCCACTTTTTCGGTCTAA+GGG | - | chr1.4:64668969-64668988 | MS.gene058777:CDS | 50.0% |
| !!! | TTCATCGGCCGCCACTTTTT+CGG | - | chr1.4:64668961-64668980 | MS.gene058777:CDS | 50.0% |
| !!! | TTGCGGCGTGGGTTTTGATT+GGG | - | chr1.4:64669689-64669708 | MS.gene058777:intron | 50.0% |
| CGAGGGATGATGAGACTGCA+GGG | - | chr1.4:64669995-64670014 | MS.gene058777:CDS | 55.0% | |
| CGGTTCAGGTGTGGTTCACA+TGG | - | chr1.4:64669242-64669261 | MS.gene058777:CDS | 55.0% | |
| CTAGAATAGGGCGGTTCGAC+CGG | - | chr1.4:64669307-64669326 | MS.gene058777:CDS | 55.0% | |
| CTGTAGTCACCCGAAGGTGA+AGG | + | chr1.4:64669000-64669019 | None:intergenic | 55.0% | |
| GAAAGGACATAGCGCGTCGT+TGG | - | chr1.4:64669350-64669369 | MS.gene058777:intron | 55.0% | |
| GCATAGGTAGTCTGCAACGG+CGG | + | chr1.4:64668695-64668714 | None:intergenic | 55.0% | |
| GGATGATGAGACTGCAGGGA+TGG | - | chr1.4:64669999-64670018 | MS.gene058777:CDS | 55.0% | |
| GGCCGGTCTGTTGCATTGAA+AGG | - | chr1.4:64669333-64669352 | MS.gene058777:intron | 55.0% | |
| TCGAGGGATGATGAGACTGC+AGG | - | chr1.4:64669994-64670013 | MS.gene058777:CDS | 55.0% | |
| TGCCACCGAACACGATACGT+CGG | - | chr1.4:64670140-64670159 | MS.gene058777:CDS | 55.0% | |
| TGGTGGAGGGAGGTTGTTTG+CGG | - | chr1.4:64669876-64669895 | MS.gene058777:CDS | 55.0% | |
| ! | CATTGGGTTTGGTCTGCCGA+TGG | - | chr1.4:64669156-64669175 | MS.gene058777:CDS | 55.0% |
| ! | GGATTGTTGATGGGTGGTGG+AGG | - | chr1.4:64669862-64669881 | MS.gene058777:CDS | 55.0% |
| ! | GGTGTCACAACAACACTGGC+TGG | - | chr1.4:64669511-64669530 | MS.gene058777:intron | 55.0% |
| ! | GGTTTGGTCTGCCGATGGTT+GGG | - | chr1.4:64669161-64669180 | MS.gene058777:CDS | 55.0% |
| ! | GTATCGTGTTCGGTGGCAGA+GGG | + | chr1.4:64670138-64670157 | None:intergenic | 55.0% |
| !! | CACATGGTGGGTGGTATAGC+AGG | - | chr1.4:64669258-64669277 | MS.gene058777:CDS | 55.0% |
| !! | CGCATGGGGGGTGTTGTTTA+CGG | - | chr1.4:64669783-64669802 | MS.gene058777:CDS | 55.0% |
| !! | GCATGGGGGGTGTTGTTTAC+GGG | - | chr1.4:64669784-64669803 | MS.gene058777:CDS | 55.0% |
| !! | GTTGCGGCGTGGGTTTTGAT+TGG | - | chr1.4:64669688-64669707 | MS.gene058777:intron | 55.0% |
| !! | TGACTTTGCCGGTTCAGGTG+TGG | - | chr1.4:64669233-64669252 | MS.gene058777:CDS | 55.0% |
| !! | TGGCACCGACGTATCGTGTT+CGG | + | chr1.4:64670148-64670167 | None:intergenic | 55.0% |
| !!! | GCCGCCACTTTTTCGGTCTA+AGG | - | chr1.4:64668968-64668987 | MS.gene058777:CDS | 55.0% |
| AATGTCCTCGACGCTGCAGC+CGG | - | chr1.4:64668880-64668899 | MS.gene058777:CDS | 60.0% | |
| AGGACATAGCGCGTCGTTGG+TGG | - | chr1.4:64669353-64669372 | MS.gene058777:intron | 60.0% | |
| AGGCTGCGCAGTTACACGGA+GGG | - | chr1.4:64669755-64669774 | MS.gene058777:intron | 60.0% | |
| AGTGATACCGGCAGCAGCGA+TGG | + | chr1.4:64669049-64669068 | None:intergenic | 60.0% | |
| ATGCAACAGACCGGCCTGTC+CGG | + | chr1.4:64669329-64669348 | None:intergenic | 60.0% | |
| CACCGACGTATCGTGTTCGG+TGG | + | chr1.4:64670145-64670164 | None:intergenic | 60.0% | |
| CATGGCGAAACCGAGCTGCA+TGG | + | chr1.4:64668809-64668828 | None:intergenic | 60.0% | |
| CATGGGCCGCGATTGTGTGT+GGG | - | chr1.4:64669662-64669681 | MS.gene058777:intron | 60.0% | |
| CGGTCGAACCGCCCTATTCT+AGG | + | chr1.4:64669309-64669328 | None:intergenic | 60.0% | |
| GAGGGAGACACACTCATGGC+CGG | + | chr1.4:64670120-64670139 | None:intergenic | 60.0% | |
| GCACCCTCCAACGGCTTCAT+CGG | - | chr1.4:64668946-64668965 | MS.gene058777:CDS | 60.0% | |
| GCTGCTGCCGGTATCACTAG+TGG | - | chr1.4:64669051-64669070 | MS.gene058777:CDS | 60.0% | |
| GGCAGAGGGAGACACACTCA+TGG | + | chr1.4:64670124-64670143 | None:intergenic | 60.0% | |
| TGCAACGGCGGTTGCGTTTG+CGG | + | chr1.4:64668683-64668702 | None:intergenic | 60.0% | |
| ! | CGTATCGTGTTCGGTGGCAG+AGG | + | chr1.4:64670139-64670158 | None:intergenic | 60.0% |
| ! | GGGTTTGGTCTGCCGATGGT+TGG | - | chr1.4:64669160-64669179 | MS.gene058777:CDS | 60.0% |
| ! | GGTGTGGTTCACATGGTGGG+TGG | - | chr1.4:64669249-64669268 | MS.gene058777:CDS | 60.0% |
| ! | GGTTGGTACGGGTTCAACCC+CGG | - | chr1.4:64669402-64669421 | MS.gene058777:intron | 60.0% |
| ! | TTGCGGTGGTGGTGAGGAGT+GGG | + | chr1.4:64668666-64668685 | None:intergenic | 60.0% |
| ! | TTGCGTTTGCGGTGGTGGTG+AGG | + | chr1.4:64668672-64668691 | None:intergenic | 60.0% |
| ! | TTTGCGGTGGTGGTGAGGAG+TGG | + | chr1.4:64668667-64668686 | None:intergenic | 60.0% |
| !! | ACCATTGGTTCGCGTTGGGC+TGG | + | chr1.4:64669187-64669206 | None:intergenic | 60.0% |
| !! | AGCGCGTCGTTGGTGGTGTT+GGG | - | chr1.4:64669360-64669379 | MS.gene058777:intron | 60.0% |
| !! | GCCTTTGGAGCACCCTCCAA+CGG | - | chr1.4:64668937-64668956 | MS.gene058777:CDS | 60.0% |
| !! | GTGTGGGTTTGTTGCGGCGT+GGG | - | chr1.4:64669678-64669697 | MS.gene058777:intron | 60.0% |
| !! | TAGCGCGTCGTTGGTGGTGT+TGG | - | chr1.4:64669359-64669378 | MS.gene058777:intron | 60.0% |
| !! | TGGGTGGGTTACCGTCACGA+TGG | - | chr1.4:64669927-64669946 | MS.gene058777:CDS | 60.0% |
| !! | TGTGTGGGTTTGTTGCGGCG+TGG | - | chr1.4:64669677-64669696 | MS.gene058777:intron | 60.0% |
| !! | TGTTGATGGGTGGTGGAGGG+AGG | - | chr1.4:64669866-64669885 | MS.gene058777:CDS | 60.0% |
| AACGGAGCCTGCGCAGAGCA+TGG | + | chr1.4:64668827-64668846 | None:intergenic | 65.0% | |
| AACGGCGGTTGCGTTTGCGG+TGG | + | chr1.4:64668680-64668699 | None:intergenic | 65.0% | |
| AGGGAGGTTGTTTGCGGCGC+AGG | - | chr1.4:64669882-64669901 | MS.gene058777:CDS | 65.0% | |
| ATAGGGCGGTTCGACCGGAC+AGG | - | chr1.4:64669312-64669331 | MS.gene058777:CDS | 65.0% | |
| CAGCGATGGCGAAGGCCCAT+TGG | + | chr1.4:64669035-64669054 | None:intergenic | 65.0% | |
| CCACACACAATCGCGGCCCA+TGG | + | chr1.4:64669664-64669683 | None:intergenic | 65.0% | |
| CCATGGGCCGCGATTGTGTG+TGG | - | chr1.4:64669661-64669680 | MS.gene058777:intron | 65.0% | |
| CGGCCGATGAAGCCGTTGGA+GGG | + | chr1.4:64668952-64668971 | None:intergenic | 65.0% | |
| GAGGAGTGGGGCTAGGTCTG+TGG | + | chr1.4:64668653-64668672 | None:intergenic | 65.0% | |
| GAGGCTGCGCAGTTACACGG+AGG | - | chr1.4:64669754-64669773 | MS.gene058777:intron | 65.0% | |
| GAGGTTGTTTGCGGCGCAGG+TGG | - | chr1.4:64669885-64669904 | MS.gene058777:CDS | 65.0% | |
| GCCAGCCCAACGCGAACCAA+TGG | - | chr1.4:64669183-64669202 | MS.gene058777:CDS | 65.0% | |
| GCGCAGTTACACGGAGGGTG+TGG | - | chr1.4:64669760-64669779 | MS.gene058777:CDS | 65.0% | |
| GGTTTCGCCATGCTCTGCGC+AGG | - | chr1.4:64668817-64668836 | MS.gene058777:CDS | 65.0% | |
| GTTTGCGGCGCAGGTGGTTG+AGG | - | chr1.4:64669891-64669910 | MS.gene058777:CDS | 65.0% | |
| ! | ACACGGAGGGTGTGGCGCAT+GGG | - | chr1.4:64669768-64669787 | MS.gene058777:CDS | 65.0% |
| ! | GGCTGCAGCGTCGAGGACAT+TGG | + | chr1.4:64668881-64668900 | None:intergenic | 65.0% |
| ! | TACACGGAGGGTGTGGCGCA+TGG | - | chr1.4:64669767-64669786 | MS.gene058777:CDS | 65.0% |
| ! | TGCGGTGGTGGTGAGGAGTG+GGG | + | chr1.4:64668665-64668684 | None:intergenic | 65.0% |
| ! | TGGTGGTGAGGAGTGGGGCT+AGG | + | chr1.4:64668660-64668679 | None:intergenic | 65.0% |
| !! | CGTTGGGCTGGCCCAACCAT+CGG | + | chr1.4:64669175-64669194 | None:intergenic | 65.0% |
| !! | GCCGTTGGAGGGTGCTCCAA+AGG | + | chr1.4:64668941-64668960 | None:intergenic | 65.0% |
| ACCGGCAGCAGCGATGGCGA+AGG | + | chr1.4:64669043-64669062 | None:intergenic | 70.0% | |
| GCCTTCGCCATCGCTGCTGC+CGG | - | chr1.4:64669039-64669058 | MS.gene058777:CDS | 70.0% | |
| GCGGCCGATGAAGCCGTTGG+AGG | + | chr1.4:64668953-64668972 | None:intergenic | 70.0% | |
| GGCGCAGGTGGTTGAGGTGC+TGG | - | chr1.4:64669897-64669916 | MS.gene058777:CDS | 70.0% | |
| GGCGGTTGCGTTTGCGGTGG+TGG | + | chr1.4:64668677-64668696 | None:intergenic | 70.0% | |
| GTGGCGGCCGATGAAGCCGT+TGG | + | chr1.4:64668956-64668975 | None:intergenic | 70.0% | |
| ! | ACGGAGGGTGTGGCGCATGG+GGG | - | chr1.4:64669770-64669789 | MS.gene058777:CDS | 70.0% |
| ! | CACGGAGGGTGTGGCGCATG+GGG | - | chr1.4:64669769-64669788 | MS.gene058777:CDS | 70.0% |
| GGCGGTTCGACCGGACAGGC+CGG | - | chr1.4:64669316-64669335 | MS.gene058777:CDS | 75.0% | |
| GTCCTCGACGCTGCAGCCGG+TGG | - | chr1.4:64668883-64668902 | MS.gene058777:CDS | 75.0% | |
| ! | CGGAGGGTGTGGCGCATGGG+GGG | - | chr1.4:64669771-64669790 | MS.gene058777:CDS | 75.0% |
| !! | GGCCACCGGCTGCAGCGTCG+AGG | + | chr1.4:64668888-64668907 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 64668628 | 64670188 | 64668628 | ID=MS.gene058777 |
| chr1.4 | mRNA | 64668628 | 64670188 | 64668628 | ID=MS.gene058777.t1;Parent=MS.gene058777 |
| chr1.4 | exon | 64669756 | 64670188 | 64669756 | ID=MS.gene058777.t1.exon1;Parent=MS.gene058777.t1 |
| chr1.4 | CDS | 64669756 | 64670188 | 64669756 | ID=cds.MS.gene058777.t1;Parent=MS.gene058777.t1 |
| chr1.4 | exon | 64668628 | 64669343 | 64668628 | ID=MS.gene058777.t1.exon2;Parent=MS.gene058777.t1 |
| chr1.4 | CDS | 64668628 | 64669343 | 64668628 | ID=cds.MS.gene058777.t1;Parent=MS.gene058777.t1 |
| Gene Sequence |
| Protein sequence |
