Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072871.t1 | XP_003603362.1 | 98.5 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 5.90E-50 | 206.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072871.t1 | P14009 | 65.1 | 86 | 28 | 2 | 45 | 129 | 52 | 136 | 1.9e-25 | 116.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072871.t1 | B7FMX8 | 98.5 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.3e-50 | 206.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene072871 | 0.872645 | 2.71E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene072871 | 0.802223 | 6.21E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene072871 | -0.809102 | 2.23E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene072871 | 0.805887 | 1.07E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene072871 | 0.853213 | 2.77E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene072871 | 0.891558 | 3.56E-74 | -1.69E-46 |
| MS.gene049285 | MS.gene072871 | 0.904904 | 7.53E-80 | -1.69E-46 |
| MS.gene049320 | MS.gene072871 | 0.907263 | 6.12E-81 | -1.69E-46 |
| MS.gene049600 | MS.gene072871 | 0.822016 | 2.97E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene072871 | 0.839926 | 1.18E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene072871 | 0.848898 | 4.57E-60 | -1.69E-46 |
| MS.gene049657 | MS.gene072871 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene072871 | 0.824693 | 7.03E-54 | -1.69E-46 |
| MS.gene04986 | MS.gene072871 | -0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene072871 | 0.908589 | 1.45E-81 | -1.69E-46 |
| MS.gene050163 | MS.gene072871 | 0.837423 | 5.24E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene072871 | 0.845114 | 4.97E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene072871 | 0.878019 | 3.94E-69 | -1.69E-46 |
| MS.gene050216 | MS.gene072871 | 0.847535 | 1.09E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene072871 | 0.893192 | 7.90E-75 | -1.69E-46 |
| MS.gene050333 | MS.gene072871 | 0.86552 | 5.57E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene072871 | 0.916457 | 1.74E-85 | -1.69E-46 |
| MS.gene050502 | MS.gene072871 | 0.822556 | 2.22E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene072871 | 0.889288 | 2.77E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene072871 | 0.896807 | 2.59E-76 | -1.69E-46 |
| MS.gene050577 | MS.gene072871 | 0.858581 | 7.47E-63 | -1.69E-46 |
| MS.gene050612 | MS.gene072871 | 0.911082 | 9.09E-83 | -1.69E-46 |
| MS.gene050662 | MS.gene072871 | 0.84118 | 5.56E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene072871 | 0.87715 | 7.91E-69 | -1.69E-46 |
| MS.gene050697 | MS.gene072871 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene072871 | 0.891269 | 4.64E-74 | -1.69E-46 |
| MS.gene050747 | MS.gene072871 | 0.818379 | 2.02E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene072871 | 0.892212 | 1.96E-74 | -1.69E-46 |
| MS.gene05080 | MS.gene072871 | 0.846008 | 2.84E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene072871 | 0.863123 | 3.12E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene072871 | 0.861213 | 1.20E-63 | -1.69E-46 |
| MS.gene050876 | MS.gene072871 | 0.858733 | 6.73E-63 | -1.69E-46 |
| MS.gene050883 | MS.gene072871 | -0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene072871 | 0.834694 | 2.59E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene072871 | 0.815926 | 7.20E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene072871 | 0.898024 | 7.96E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene072871 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene072871 | 0.828551 | 8.44E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene072871 | 0.840561 | 8.08E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene072871 | -0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene072871 | -0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene051367 | MS.gene072871 | -0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene072871 | 0.815295 | 9.94E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene072871 | 0.861417 | 1.04E-63 | -1.69E-46 |
| MS.gene051810 | MS.gene072871 | 0.836078 | 1.16E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene072871 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene052066 | MS.gene072871 | 0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene072871 | 0.835048 | 2.11E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene072871 | 0.871868 | 4.92E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene072871 | 0.876347 | 1.50E-68 | -1.69E-46 |
| MS.gene052503 | MS.gene072871 | 0.814498 | 1.49E-51 | -1.69E-46 |
| MS.gene052504 | MS.gene072871 | 0.858587 | 7.44E-63 | -1.69E-46 |
| MS.gene052506 | MS.gene072871 | 0.875884 | 2.17E-68 | -1.69E-46 |
| MS.gene052615 | MS.gene072871 | 0.815199 | 1.04E-51 | -1.69E-46 |
| MS.gene052820 | MS.gene072871 | 0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene072871 | 0.891083 | 5.49E-74 | -1.69E-46 |
| MS.gene052823 | MS.gene072871 | 0.80907 | 2.27E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene072871 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene072871 | 0.875893 | 2.15E-68 | -1.69E-46 |
| MS.gene052966 | MS.gene072871 | 0.854191 | 1.45E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene072871 | 0.861295 | 1.13E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene072871 | 0.802413 | 5.68E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene072871 | 0.874116 | 8.68E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene072871 | 0.87701 | 8.85E-69 | -1.69E-46 |
| MS.gene053420 | MS.gene072871 | -0.805733 | 1.16E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene072871 | 0.841125 | 5.74E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene072871 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene072871 | 0.870539 | 1.35E-66 | -1.69E-46 |
| MS.gene053626 | MS.gene072871 | 0.816522 | 5.30E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene072871 | 0.834395 | 3.07E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene072871 | 0.838697 | 2.47E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene072871 | 0.838953 | 2.12E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene072871 | 0.842577 | 2.38E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene072871 | 0.847978 | 8.21E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene072871 | 0.891384 | 4.17E-74 | -1.69E-46 |
| MS.gene05470 | MS.gene072871 | 0.828959 | 6.73E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene072871 | 0.923932 | 1.38E-89 | -1.69E-46 |
| MS.gene055154 | MS.gene072871 | -0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene072871 | 0.814649 | 1.38E-51 | -1.69E-46 |
| MS.gene055251 | MS.gene072871 | -0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene072871 | 0.908936 | 9.90E-82 | -1.69E-46 |
| MS.gene055502 | MS.gene072871 | 0.869788 | 2.38E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene072871 | 0.851192 | 1.04E-60 | -1.69E-46 |
| MS.gene055634 | MS.gene072871 | 0.849619 | 2.88E-60 | -1.69E-46 |
| MS.gene055638 | MS.gene072871 | 0.815183 | 1.05E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene072871 | 0.85305 | 3.09E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene072871 | 0.855888 | 4.66E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene072871 | 0.879722 | 9.88E-70 | -1.69E-46 |
| MS.gene055751 | MS.gene072871 | 0.873808 | 1.10E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene072871 | 0.909097 | 8.29E-82 | -1.69E-46 |
| MS.gene055849 | MS.gene072871 | 0.873401 | 1.51E-67 | -1.69E-46 |
| MS.gene05589 | MS.gene072871 | 0.867278 | 1.54E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene072871 | 0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene072871 | -0.835512 | 1.61E-56 | -1.69E-46 |
| MS.gene056046 | MS.gene072871 | 0.863441 | 2.48E-64 | -1.69E-46 |
| MS.gene056374 | MS.gene072871 | 0.832177 | 1.10E-55 | -1.69E-46 |
| MS.gene056446 | MS.gene072871 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene072871 | 0.920811 | 7.97E-88 | -1.69E-46 |
| MS.gene056510 | MS.gene072871 | 0.903912 | 2.12E-79 | -1.69E-46 |
| MS.gene056657 | MS.gene072871 | 0.906022 | 2.31E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene072871 | 0.842406 | 2.64E-58 | -1.69E-46 |
| MS.gene056761 | MS.gene072871 | -0.802006 | 6.89E-49 | -1.69E-46 |
| MS.gene056878 | MS.gene072871 | 0.840517 | 8.29E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene072871 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene072871 | 0.827753 | 1.31E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene072871 | 0.832879 | 7.35E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene072871 | 0.824187 | 9.25E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene072871 | 0.835137 | 2.00E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene072871 | 0.834684 | 2.60E-56 | -1.69E-46 |
| MS.gene057872 | MS.gene072871 | 0.834235 | 3.37E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene072871 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene072871 | -0.833163 | 6.25E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene072871 | 0.815676 | 8.18E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene072871 | 0.848212 | 7.08E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene072871 | 0.89812 | 7.24E-77 | -1.69E-46 |
| MS.gene058544 | MS.gene072871 | 0.835254 | 1.87E-56 | -1.69E-46 |
| MS.gene058719 | MS.gene072871 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene072871 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene072871 | 0.867417 | 1.39E-65 | -1.69E-46 |
| MS.gene058774 | MS.gene072871 | 0.830721 | 2.50E-55 | -1.69E-46 |
| MS.gene058775 | MS.gene072871 | 0.827206 | 1.78E-54 | -1.69E-46 |
| MS.gene058777 | MS.gene072871 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene072871 | 0.81722 | 3.69E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene072871 | 0.905554 | 3.80E-80 | -1.69E-46 |
| MS.gene059023 | MS.gene072871 | 0.853546 | 2.22E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene072871 | 0.827635 | 1.40E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene072871 | 0.822343 | 2.49E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene072871 | 0.885152 | 1.04E-71 | -1.69E-46 |
| MS.gene059699 | MS.gene072871 | -0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene059701 | MS.gene072871 | -0.810799 | 9.63E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene072871 | -0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene072871 | 0.86932 | 3.38E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene072871 | 0.823949 | 1.05E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene072871 | 0.814639 | 1.39E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene072871 | 0.88242 | 1.06E-70 | -1.69E-46 |
| MS.gene059865 | MS.gene072871 | 0.909245 | 7.05E-82 | -1.69E-46 |
| MS.gene06000 | MS.gene072871 | 0.84315 | 1.67E-58 | -1.69E-46 |
| MS.gene060337 | MS.gene072871 | -0.813067 | 3.09E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene072871 | 0.847776 | 9.33E-60 | -1.69E-46 |
| MS.gene060526 | MS.gene072871 | 0.826325 | 2.89E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene072871 | -0.829019 | 6.51E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene072871 | 0.884834 | 1.37E-71 | -1.69E-46 |
| MS.gene060762 | MS.gene072871 | 0.853321 | 2.58E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene072871 | 0.869822 | 2.32E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene072871 | 0.893217 | 7.72E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene072871 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene072871 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene072871 | 0.908711 | 1.27E-81 | -1.69E-46 |
| MS.gene061150 | MS.gene072871 | 0.833343 | 5.63E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072871.t1 | MTR_3g106740 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 1.83e-85 | 245 |
| MS.gene072871.t1 | MTR_1g012690 | 59.091 | 154 | 37 | 3 | 1 | 129 | 1 | 153 | 9.54e-51 | 158 |
| MS.gene072871.t1 | MTR_1g012700 | 57.317 | 164 | 34 | 3 | 1 | 129 | 1 | 163 | 1.26e-50 | 158 |
| MS.gene072871.t1 | MTR_3g106750 | 73.282 | 131 | 30 | 2 | 1 | 129 | 1 | 128 | 1.63e-48 | 152 |
| MS.gene072871.t1 | MTR_1g012710 | 59.868 | 152 | 38 | 2 | 1 | 130 | 1 | 151 | 8.63e-48 | 150 |
| MS.gene072871.t1 | MTR_1g012630 | 78.571 | 84 | 17 | 1 | 46 | 129 | 127 | 209 | 4.82e-40 | 133 |
| MS.gene072871.t1 | MTR_4g108150 | 52.459 | 122 | 53 | 2 | 8 | 129 | 6 | 122 | 5.54e-35 | 117 |
| MS.gene072871.t1 | MTR_4g101260 | 51.969 | 127 | 55 | 3 | 8 | 129 | 6 | 131 | 7.44e-34 | 115 |
| MS.gene072871.t1 | MTR_2g026760 | 60.360 | 111 | 40 | 4 | 21 | 129 | 18 | 126 | 1.19e-33 | 114 |
| MS.gene072871.t1 | MTR_4g101280 | 63.218 | 87 | 30 | 2 | 44 | 129 | 57 | 142 | 2.53e-31 | 108 |
| MS.gene072871.t1 | MTR_4g101330 | 63.953 | 86 | 29 | 2 | 45 | 129 | 84 | 168 | 3.38e-30 | 107 |
| MS.gene072871.t1 | MTR_4g101310 | 60.000 | 85 | 32 | 2 | 46 | 129 | 50 | 133 | 2.55e-29 | 103 |
| MS.gene072871.t1 | MTR_4g101270 | 58.824 | 85 | 32 | 3 | 47 | 130 | 105 | 187 | 1.03e-23 | 90.9 |
| MS.gene072871.t1 | MTR_5g012340 | 44.828 | 87 | 45 | 2 | 44 | 129 | 92 | 176 | 8.45e-23 | 88.2 |
| MS.gene072871.t1 | MTR_5g012380 | 43.678 | 87 | 46 | 2 | 44 | 129 | 85 | 169 | 3.64e-22 | 86.7 |
| MS.gene072871.t1 | MTR_2g026920 | 45.679 | 81 | 41 | 2 | 50 | 130 | 118 | 195 | 2.45e-17 | 74.3 |
| MS.gene072871.t1 | MTR_2g026930 | 46.250 | 80 | 40 | 2 | 50 | 129 | 122 | 198 | 2.47e-17 | 74.7 |
| MS.gene072871.t1 | MTR_3g082100 | 44.828 | 87 | 47 | 1 | 44 | 130 | 251 | 336 | 1.60e-15 | 71.6 |
| MS.gene072871.t1 | MTR_2g026775 | 48.718 | 78 | 34 | 3 | 54 | 129 | 686 | 759 | 2.15e-15 | 71.6 |
| MS.gene072871.t1 | MTR_4g115360 | 54.023 | 87 | 37 | 3 | 44 | 129 | 148 | 232 | 5.27e-13 | 63.5 |
| MS.gene072871.t1 | MTR_2g026820 | 52.113 | 71 | 29 | 3 | 52 | 121 | 542 | 608 | 1.85e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072871.t1 | AT2G45180 | 74.419 | 86 | 21 | 1 | 44 | 129 | 49 | 133 | 3.27e-37 | 123 |
| MS.gene072871.t1 | AT1G62510 | 68.235 | 85 | 25 | 2 | 46 | 129 | 66 | 149 | 7.74e-33 | 113 |
| MS.gene072871.t1 | AT4G12490 | 41.758 | 182 | 52 | 4 | 1 | 129 | 1 | 181 | 7.86e-32 | 111 |
| MS.gene072871.t1 | AT4G12480 | 64.368 | 87 | 29 | 2 | 44 | 129 | 82 | 167 | 1.01e-31 | 110 |
| MS.gene072871.t1 | AT4G12470 | 61.111 | 90 | 33 | 2 | 42 | 130 | 73 | 161 | 1.75e-31 | 110 |
| MS.gene072871.t1 | AT5G46890 | 54.962 | 131 | 52 | 5 | 1 | 129 | 1 | 126 | 1.89e-31 | 108 |
| MS.gene072871.t1 | AT4G12500 | 64.368 | 87 | 29 | 2 | 44 | 129 | 91 | 176 | 2.45e-31 | 110 |
| MS.gene072871.t1 | AT5G46900 | 69.663 | 89 | 23 | 3 | 41 | 129 | 42 | 126 | 2.66e-31 | 108 |
| MS.gene072871.t1 | AT1G12090 | 68.293 | 82 | 24 | 2 | 49 | 129 | 57 | 137 | 3.57e-31 | 108 |
| MS.gene072871.t1 | AT4G00165 | 54.808 | 104 | 43 | 3 | 29 | 129 | 26 | 128 | 5.86e-31 | 107 |
| MS.gene072871.t1 | AT4G00165 | 54.808 | 104 | 43 | 3 | 29 | 129 | 26 | 128 | 5.86e-31 | 107 |
| MS.gene072871.t1 | AT4G12520 | 54.198 | 131 | 55 | 5 | 1 | 129 | 1 | 128 | 2.93e-30 | 105 |
| MS.gene072871.t1 | AT4G12510 | 54.198 | 131 | 55 | 5 | 1 | 129 | 1 | 128 | 2.93e-30 | 105 |
| MS.gene072871.t1 | AT4G22460 | 51.852 | 108 | 52 | 0 | 23 | 130 | 26 | 133 | 3.48e-29 | 103 |
| MS.gene072871.t1 | AT4G12550 | 56.977 | 86 | 35 | 2 | 45 | 129 | 26 | 110 | 2.27e-28 | 100 |
| MS.gene072871.t1 | AT1G12100 | 43.651 | 126 | 65 | 4 | 7 | 129 | 9 | 131 | 3.60e-27 | 98.2 |
| MS.gene072871.t1 | AT4G12545 | 56.180 | 89 | 34 | 3 | 42 | 129 | 23 | 107 | 7.49e-26 | 94.0 |
| MS.gene072871.t1 | AT4G12530 | 47.126 | 87 | 45 | 1 | 44 | 130 | 31 | 116 | 9.77e-23 | 86.3 |
| MS.gene072871.t1 | AT3G22142 | 56.977 | 86 | 32 | 4 | 47 | 130 | 1397 | 1479 | 1.04e-22 | 92.8 |
| MS.gene072871.t1 | AT2G10940 | 55.172 | 87 | 36 | 3 | 44 | 129 | 205 | 289 | 1.32e-21 | 87.4 |
| MS.gene072871.t1 | AT2G10940 | 55.172 | 87 | 36 | 3 | 44 | 129 | 205 | 289 | 1.32e-21 | 87.4 |
| MS.gene072871.t1 | AT3G22120 | 49.412 | 85 | 41 | 2 | 47 | 130 | 267 | 350 | 1.48e-18 | 80.1 |
| MS.gene072871.t1 | AT4G15160 | 50.000 | 86 | 40 | 3 | 47 | 130 | 99 | 183 | 1.74e-18 | 77.4 |
| MS.gene072871.t1 | AT3G22120 | 49.412 | 85 | 41 | 2 | 47 | 130 | 250 | 333 | 2.54e-18 | 79.3 |
| MS.gene072871.t1 | AT4G15160 | 50.000 | 86 | 40 | 3 | 47 | 130 | 181 | 265 | 5.52e-18 | 77.8 |
| MS.gene072871.t1 | AT4G22490 | 37.500 | 96 | 53 | 3 | 37 | 130 | 27 | 117 | 6.63e-16 | 68.9 |
| MS.gene072871.t1 | AT1G62500 | 43.529 | 85 | 45 | 3 | 47 | 130 | 212 | 294 | 6.34e-15 | 69.7 |
Find 42 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATGTTGTGCATTGATTA+AGG | 0.202840 | 3.2:-87429870 | MS.gene072871:CDS |
| AGCACAAACCCCTAGCTTTA+AGG | 0.218235 | 3.2:+87429943 | None:intergenic |
| GGGTTGGTTAATGTTGTTAT+TGG | 0.240421 | 3.2:-87429911 | MS.gene072871:CDS |
| TCCTTAGGGCATTGACCTTT+GGG | 0.253417 | 3.2:+87429968 | None:intergenic |
| ATCCTTAGGGCATTGACCTT+TGG | 0.263717 | 3.2:+87429967 | None:intergenic |
| GATTAAGGGTTTGGCTGATT+TGG | 0.309202 | 3.2:-87429855 | MS.gene072871:CDS |
| AAGAGAAAGCACTAAAATTA+AGG | 0.315935 | 3.2:+87430072 | None:intergenic |
| TTGTCTTTGCACTGCACTTA+AGG | 0.338630 | 3.2:-87429822 | MS.gene072871:CDS |
| CCTAGCTTTAAGGTATCCTT+AGG | 0.341849 | 3.2:+87429953 | None:intergenic |
| AAATGTTGTGCATTGATTAA+GGG | 0.358491 | 3.2:-87429869 | MS.gene072871:CDS |
| GAAGGTGTTGGCTTTGGTGA+TGG | 0.414445 | 3.2:+87430013 | None:intergenic |
| CCTTTGGGTGAAGGTGGAAC+AGG | 0.427685 | 3.2:+87429983 | None:intergenic |
| GTTATTGGAAACCCTCCTTC+AGG | 0.428430 | 3.2:-87429896 | MS.gene072871:CDS |
| TTGTGCATTGATTAAGGGTT+TGG | 0.429971 | 3.2:-87429864 | MS.gene072871:CDS |
| AGGAGCACGCTGAGCGTGAT+AGG | 0.432511 | 3.2:+87429770 | None:intergenic |
| GGGCATTGACCTTTGGGTGA+AGG | 0.436950 | 3.2:+87429974 | None:intergenic |
| AATTAAGGCAGAGAATTTGT+TGG | 0.438270 | 3.2:+87430087 | None:intergenic |
| GCAGGTGAAGGTGTTGGCTT+TGG | 0.458002 | 3.2:+87430007 | None:intergenic |
| TAAGGGTTTGGCTGATTTGG+AGG | 0.464987 | 3.2:-87429852 | MS.gene072871:CDS |
| ATTGGAATCCTTAGGGACAT+TGG | 0.481064 | 3.2:+87429714 | None:intergenic |
| GGTGAAGGTGGAACAGGAGC+AGG | 0.481606 | 3.2:+87429989 | None:intergenic |
| GCACTTAAGGCTAATGTGCT+TGG | 0.487972 | 3.2:-87429809 | MS.gene072871:CDS |
| CCTGGTTTCCAATGTCCCTA+AGG | 0.488513 | 3.2:-87429722 | None:intergenic |
| CCTAAGGATACCTTAAAGCT+AGG | 0.505679 | 3.2:-87429953 | MS.gene072871:CDS |
| CTAAGGATACCTTAAAGCTA+GGG | 0.512185 | 3.2:-87429952 | MS.gene072871:CDS |
| GGTGTTGGCTTTGGTGATGG+TGG | 0.522065 | 3.2:+87430016 | None:intergenic |
| CATTGACCTTTGGGTGAAGG+TGG | 0.538821 | 3.2:+87429977 | None:intergenic |
| CCTTAGGGACATTGGAAACC+AGG | 0.543402 | 3.2:+87429722 | None:intergenic |
| ACATTGGAAACCAGGAGGGA+CGG | 0.567925 | 3.2:+87429730 | None:intergenic |
| CCTGTTCCACCTTCACCCAA+AGG | 0.572122 | 3.2:-87429983 | MS.gene072871:CDS |
| CTAGCTTTAAGGTATCCTTA+GGG | 0.574702 | 3.2:+87429954 | None:intergenic |
| AACATTTACTACCTGAAGGA+GGG | 0.575828 | 3.2:+87429885 | None:intergenic |
| ACAGGAGCAGGTGAAGGTGT+TGG | 0.576951 | 3.2:+87430001 | None:intergenic |
| TGATGGTGGACAATTAGCTT+CGG | 0.580942 | 3.2:+87430030 | None:intergenic |
| ACCCAAAGGTCAATGCCCTA+AGG | 0.586732 | 3.2:-87429969 | MS.gene072871:CDS |
| GGTGGAACAGGAGCAGGTGA+AGG | 0.595926 | 3.2:+87429995 | None:intergenic |
| AGCTTCGGTGAATGTTGAGT+AGG | 0.595958 | 3.2:+87430045 | None:intergenic |
| CAACATTTACTACCTGAAGG+AGG | 0.605436 | 3.2:+87429884 | None:intergenic |
| GCACAACATTTACTACCTGA+AGG | 0.630292 | 3.2:+87429881 | None:intergenic |
| TAAGGATACCTTAAAGCTAG+GGG | 0.646982 | 3.2:-87429951 | MS.gene072871:CDS |
| AGGGACATTGGAAACCAGGA+GGG | 0.669232 | 3.2:+87429726 | None:intergenic |
| TAGGGACATTGGAAACCAGG+AGG | 0.715268 | 3.2:+87429725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTTGTGCATTGATTAA+GGG | - | chr3.2:87429949-87429968 | MS.gene072871:CDS | 25.0% |
| !!! | AAGAGAAAGCACTAAAATTA+AGG | + | chr3.2:87429749-87429768 | None:intergenic | 25.0% |
| !!! | TAAATGTTGTGCATTGATTA+AGG | - | chr3.2:87429948-87429967 | MS.gene072871:CDS | 25.0% |
| AATTAAGGCAGAGAATTTGT+TGG | + | chr3.2:87429734-87429753 | None:intergenic | 30.0% | |
| AACATTTACTACCTGAAGGA+GGG | + | chr3.2:87429936-87429955 | None:intergenic | 35.0% | |
| CTAAGGATACCTTAAAGCTA+GGG | - | chr3.2:87429866-87429885 | MS.gene072871:CDS | 35.0% | |
| TAAGGATACCTTAAAGCTAG+GGG | - | chr3.2:87429867-87429886 | MS.gene072871:CDS | 35.0% | |
| !! | CTAGCTTTAAGGTATCCTTA+GGG | + | chr3.2:87429867-87429886 | None:intergenic | 35.0% |
| !! | GGGTTGGTTAATGTTGTTAT+TGG | - | chr3.2:87429907-87429926 | MS.gene072871:CDS | 35.0% |
| !! | TTGTGCATTGATTAAGGGTT+TGG | - | chr3.2:87429954-87429973 | MS.gene072871:CDS | 35.0% |
| CAACATTTACTACCTGAAGG+AGG | + | chr3.2:87429937-87429956 | None:intergenic | 40.0% | |
| CCTAAGGATACCTTAAAGCT+AGG | - | chr3.2:87429865-87429884 | MS.gene072871:CDS | 40.0% | |
| GATTAAGGGTTTGGCTGATT+TGG | - | chr3.2:87429963-87429982 | MS.gene072871:CDS | 40.0% | |
| GCACAACATTTACTACCTGA+AGG | + | chr3.2:87429940-87429959 | None:intergenic | 40.0% | |
| TTGTCTTTGCACTGCACTTA+AGG | - | chr3.2:87429996-87430015 | MS.gene072871:CDS | 40.0% | |
| !! | CCTAGCTTTAAGGTATCCTT+AGG | + | chr3.2:87429868-87429887 | None:intergenic | 40.0% |
| !! | GGGTTTGTGCTGATCTTTTA+GGG | - | chr3.2:87429887-87429906 | MS.gene072871:CDS | 40.0% |
| !! | TGATGGTGGACAATTAGCTT+CGG | + | chr3.2:87429791-87429810 | None:intergenic | 40.0% |
| !!! | CGGTTTTTTGACATGCACTA+AGG | + | chr3.2:87430071-87430090 | None:intergenic | 40.0% |
| !!! | TTGTGCTGATCTTTTAGGGT+TGG | - | chr3.2:87429891-87429910 | MS.gene072871:CDS | 40.0% |
| AGCTTCGGTGAATGTTGAGT+AGG | + | chr3.2:87429776-87429795 | None:intergenic | 45.0% | |
| GCACTTAAGGCTAATGTGCT+TGG | - | chr3.2:87430009-87430028 | MS.gene072871:CDS | 45.0% | |
| GTTATTGGAAACCCTCCTTC+AGG | - | chr3.2:87429922-87429941 | MS.gene072871:CDS | 45.0% | |
| !! | AGCACAAACCCCTAGCTTTA+AGG | + | chr3.2:87429878-87429897 | None:intergenic | 45.0% |
| !! | ATCCTTAGGGCATTGACCTT+TGG | + | chr3.2:87429854-87429873 | None:intergenic | 45.0% |
| !! | GGGGTTTGTGCTGATCTTTT+AGG | - | chr3.2:87429886-87429905 | MS.gene072871:CDS | 45.0% |
| !! | TAAGGGTTTGGCTGATTTGG+AGG | - | chr3.2:87429966-87429985 | MS.gene072871:CDS | 45.0% |
| !! | TCCTTAGGGCATTGACCTTT+GGG | + | chr3.2:87429853-87429872 | None:intergenic | 45.0% |
| ACATTGGAAACCAGGAGGGA+CGG | + | chr3.2:87430091-87430110 | None:intergenic | 50.0% | |
| ACCCAAAGGTCAATGCCCTA+AGG | - | chr3.2:87429849-87429868 | MS.gene072871:CDS | 50.0% | |
| AGGGACATTGGAAACCAGGA+GGG | + | chr3.2:87430095-87430114 | None:intergenic | 50.0% | |
| CATTGACCTTTGGGTGAAGG+TGG | + | chr3.2:87429844-87429863 | None:intergenic | 50.0% | |
| TAGGGACATTGGAAACCAGG+AGG | + | chr3.2:87430096-87430115 | None:intergenic | 50.0% | |
| TGTCAAAAAACCGTCCCTCC+TGG | - | chr3.2:87430078-87430097 | MS.gene072871:CDS | 50.0% | |
| !! | GAAGGTGTTGGCTTTGGTGA+TGG | + | chr3.2:87429808-87429827 | None:intergenic | 50.0% |
| CCTGTTCCACCTTCACCCAA+AGG | - | chr3.2:87429835-87429854 | MS.gene072871:CDS | 55.0% | |
| CCTTTGGGTGAAGGTGGAAC+AGG | + | chr3.2:87429838-87429857 | None:intergenic | 55.0% | |
| ! | ACAGGAGCAGGTGAAGGTGT+TGG | + | chr3.2:87429820-87429839 | None:intergenic | 55.0% |
| !! | GCAGGTGAAGGTGTTGGCTT+TGG | + | chr3.2:87429814-87429833 | None:intergenic | 55.0% |
| !! | GGGCATTGACCTTTGGGTGA+AGG | + | chr3.2:87429847-87429866 | None:intergenic | 55.0% |
| !! | GGTGTTGGCTTTGGTGATGG+TGG | + | chr3.2:87429805-87429824 | None:intergenic | 55.0% |
| GGTGAAGGTGGAACAGGAGC+AGG | + | chr3.2:87429832-87429851 | None:intergenic | 60.0% | |
| GGTGGAACAGGAGCAGGTGA+AGG | + | chr3.2:87429826-87429845 | None:intergenic | 60.0% | |
| ! | AGGAGCACGCTGAGCGTGAT+AGG | + | chr3.2:87430051-87430070 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 87429724 | 87430116 | 87429724 | ID=MS.gene072871 |
| chr3.2 | mRNA | 87429724 | 87430116 | 87429724 | ID=MS.gene072871.t1;Parent=MS.gene072871 |
| chr3.2 | exon | 87429724 | 87430116 | 87429724 | ID=MS.gene072871.t1.exon1;Parent=MS.gene072871.t1 |
| chr3.2 | CDS | 87429724 | 87430116 | 87429724 | ID=cds.MS.gene072871.t1;Parent=MS.gene072871.t1 |
| Gene Sequence |
| Protein sequence |
