AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071900.t1 MTR_2g009220 98.413 567 7 2 1 565 1 567 0.0 1103
MS.gene071900.t1 MTR_4g065007 50.529 473 230 3 94 565 88 557 9.35e-158 462
MS.gene071900.t1 MTR_4g081600 37.759 241 125 4 340 565 410 640 1.85e-37 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071900.t1 AT5G64290 75.306 571 127 4 1 565 1 563 0.0 820
MS.gene071900.t1 AT5G64280 63.684 570 181 4 1 565 1 549 0.0 718
MS.gene071900.t1 AT5G12860 46.931 554 266 6 29 565 15 557 9.43e-160 468
MS.gene071900.t1 AT5G12860 47.016 553 265 6 29 564 15 556 1.62e-159 467

Find 156 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGTCTCTTTGTGGATCTT+TGG 0.181386 2.4:+73875670 MS.gene071900:CDS
CCCTTGGGTTACGTGGTTTA+AGG 0.188381 2.4:+73875474 MS.gene071900:CDS
GGGTTTGTGAAGACGGGTTT+AGG 0.221874 2.4:+73874039 MS.gene071900:CDS
TCTGGTGTGTCTTTAATTTC+AGG 0.227085 2.4:-73875562 None:intergenic
CTTGAGCTGGCCGGCTTCAT+TGG 0.228307 2.4:+73877023 MS.gene071900:CDS
CTTTGCACCTTGAAGAATAT+TGG 0.229477 2.4:-73873743 None:intergenic
TCTTATTCAGAACCAATTTC+AGG 0.239407 2.4:+73874272 MS.gene071900:CDS
GGCTTCATTGGCTGTTCTTC+AGG 0.266545 2.4:+73877035 MS.gene071900:CDS
CAGTCTCTTTGTGGATCTTT+GGG 0.272268 2.4:+73875671 MS.gene071900:CDS
CTCTTAGAGGAGGGACTATT+AGG 0.283627 2.4:-73874237 None:intergenic
GGGGAGGTGTTGGCTCTATC+TGG 0.287380 2.4:+73877750 MS.gene071900:CDS
TTTGTCATTTCAATCTTGAT+TGG 0.290566 2.4:+73873775 MS.gene071900:CDS
CCCGTTGCCGGTTGGAGCTT+GGG 0.292132 2.4:+73873900 MS.gene071900:CDS
TTATCAATACTCCTCGTCTT+AGG 0.295196 2.4:+73876847 MS.gene071900:CDS
GCAGCCAGGGCAGGTGCCTC+TGG 0.296528 2.4:-73875580 None:intergenic
TGCTTCTTGCAGTCTCTTTG+TGG 0.314222 2.4:+73875662 MS.gene071900:CDS
GCCCGTTGCCGGTTGGAGCT+TGG 0.316064 2.4:+73873899 MS.gene071900:CDS
AGTAAATCCAAACCTGAAAT+TGG 0.316565 2.4:-73874284 None:intergenic
TGCCCTGGCTGCAAAGAAAC+TGG 0.325452 2.4:+73875591 MS.gene071900:CDS
TTAAATTAGCACAGGAGCTT+GGG 0.329855 2.4:+73875437 MS.gene071900:CDS
ACTCTCGCAGCGCTTGCTTT+AGG 0.336598 2.4:+73877162 MS.gene071900:CDS
AAGGTTAAAGGTTGAAACTT+TGG 0.337183 2.4:-73873650 None:intergenic
AATTAGCATGAATTGGGAAA+TGG 0.340431 2.4:-73873684 None:intergenic
AGTGAAAGTGACTTAATAAT+AGG 0.342395 2.4:-73874198 None:intergenic
TTTGCACCTTGAAGAATATT+GGG 0.344765 2.4:-73873742 None:intergenic
CCTTGTGTTAAGCCCGTTGC+CGG 0.345696 2.4:+73873888 MS.gene071900:CDS
GAAAAGAGCGCTGGAGTTAC+CGG 0.347211 2.4:-73875383 None:intergenic
GCCCAGTCTGGCTTGCAAAA+AGG 0.352898 2.4:-73877080 None:intergenic
AGTACTTTAGGACTTTCTTA+TGG 0.358141 2.4:+73874102 MS.gene071900:CDS
GGAGTTGAATTAGCATGAAT+TGG 0.359792 2.4:-73873691 None:intergenic
CATTTATTAATGCTGTCATC+TGG 0.360369 2.4:+73877729 MS.gene071900:CDS
TCGTCTTAGGAGTCCTTGAC+TGG 0.360749 2.4:+73876860 MS.gene071900:CDS
CGCTCGCGGGTTTGTGAAGA+CGG 0.361497 2.4:+73874032 MS.gene071900:CDS
GGTGTAACTTCAACTGGTTT+AGG 0.377702 2.4:-73873820 None:intergenic
GGGTGGTAATTTCAAACCCT+TGG 0.378058 2.4:+73875458 MS.gene071900:CDS
GCTTGAGGTGTAACTTCAAC+TGG 0.380126 2.4:-73873826 None:intergenic
ATTGAAATGACAAAAGGAAT+TGG 0.380530 2.4:-73873766 None:intergenic
ATTAGCATGAATTGGGAAAT+GGG 0.382323 2.4:-73873683 None:intergenic
CCCAAGCTCCAACCGGCAAC+GGG 0.382342 2.4:-73873900 None:intergenic
TCTTGATTGGTCTCATTGTA+AGG 0.385380 2.4:+73873788 MS.gene071900:CDS
GGTTTGTGAAGACGGGTTTA+GGG 0.387906 2.4:+73874040 MS.gene071900:CDS
TCAAAACCCAATATTCTTCA+AGG 0.391349 2.4:+73873736 MS.gene071900:CDS
AAAAGCTCCCAATCTCTTAG+AGG 0.398809 2.4:-73874250 None:intergenic
TGGATGGGGAAGAGTACTTT+AGG 0.402380 2.4:+73874090 MS.gene071900:CDS
CAATCCCAAGGTTTGTCAAC+TGG 0.407857 2.4:-73876954 None:intergenic
GTTTGCCATTCTAGTGGGTA+TGG 0.411337 2.4:+73876927 MS.gene071900:CDS
CAAGCCAGACTGGGCATGTA+GGG 0.411568 2.4:+73877088 MS.gene071900:CDS
TTGTGACCACGGATGTTGTC+AGG 0.418201 2.4:-73873933 None:intergenic
CTTCCTGATATATTCAAAAC+GGG 0.423650 2.4:+73877695 MS.gene071900:CDS
AGTTTCTTTGCAGCCAGGGC+AGG 0.427635 2.4:-73875589 None:intergenic
CTTGCCATGCATAGGGCAGC+TGG 0.433935 2.4:+73877129 MS.gene071900:CDS
TAGTCCCTCCTCTAAGAGAT+TGG 0.440123 2.4:+73874242 MS.gene071900:CDS
GGTCAAGCTGCTGTATACTA+TGG 0.440740 2.4:+73877228 MS.gene071900:CDS
TTCGATCGTTCTCCTTGAGC+TGG 0.440822 2.4:+73877010 MS.gene071900:CDS
GTTAAATTAGCACAGGAGCT+TGG 0.443116 2.4:+73875436 MS.gene071900:CDS
GCAAGCGCTGCGAGAGTACC+AGG 0.448469 2.4:-73877156 None:intergenic
ATTTATTAATGCTGTCATCT+GGG 0.450148 2.4:+73877730 MS.gene071900:CDS
CCCTGTCACACAAAATGAAT+GGG 0.451548 2.4:+73875624 MS.gene071900:CDS
GGTGGTAATTTCAAACCCTT+GGG 0.454290 2.4:+73875459 MS.gene071900:CDS
CCTTCCTGATATATTCAAAA+CGG 0.459591 2.4:+73877694 MS.gene071900:CDS
GCCCAAGCTCCAACCGGCAA+CGG 0.461337 2.4:-73873901 None:intergenic
CACACCAGAGGCACCTGCCC+TGG 0.462143 2.4:+73875576 MS.gene071900:CDS
TTTCCAGTTTCTTTGCAGCC+AGG 0.463263 2.4:-73875594 None:intergenic
GAGTTGAATTAGCATGAATT+GGG 0.465939 2.4:-73873690 None:intergenic
CACACAAAATGAATGGGTTA+TGG 0.470045 2.4:+73875630 MS.gene071900:CDS
CATAGGGCAGCTGGTGTCCC+TGG 0.470166 2.4:+73877138 MS.gene071900:CDS
TGGTCTTGCAGAGAGACTCT+TGG 0.472309 2.4:+73876793 MS.gene071900:intron
CCAGCTCTAGCAGTAGTACT+AGG 0.475907 2.4:-73874162 None:intergenic
GCTCGCGGGTTTGTGAAGAC+GGG 0.479012 2.4:+73874033 MS.gene071900:CDS
GCTTGGTTTGCCATTCTAGT+GGG 0.480852 2.4:+73876922 MS.gene071900:CDS
GAAGGTGGTGATTGTGAAGG+TGG 0.482904 2.4:-73873715 None:intergenic
GCTGTCATCTGGGGAGGTGT+TGG 0.483473 2.4:+73877740 MS.gene071900:CDS
GCAGTAGTACTAGGCATAGC+AGG 0.484964 2.4:-73874153 None:intergenic
GAAGGTGGGTGAAGAAGTTG+TGG 0.485403 2.4:-73873503 None:intergenic
AGTCCCTCCTCTAAGAGATT+GGG 0.486229 2.4:+73874243 MS.gene071900:CDS
AGCACTAAATGCAGCTGTAA+AGG 0.486387 2.4:-73873965 None:intergenic
ATCAAGATTGAAATGACAAA+AGG 0.487616 2.4:-73873772 None:intergenic
AAGCCCCTACATGCCCAGTC+TGG 0.488462 2.4:-73877092 None:intergenic
TGCATTTCTTGCCATGCATA+GGG 0.488787 2.4:+73877122 MS.gene071900:CDS
TGCAAAGAAACTGGAAACGA+TGG 0.489852 2.4:+73875600 MS.gene071900:CDS
GGCTTGGTTTGCCATTCTAG+TGG 0.491057 2.4:+73876921 MS.gene071900:CDS
GCAAGCCAGTTGACAAACCT+TGG 0.492138 2.4:+73876949 MS.gene071900:CDS
GTGTTAAGCCCGTTGCCGGT+TGG 0.495797 2.4:+73873892 MS.gene071900:CDS
GCCCTGTCACACAAAATGAA+TGG 0.496344 2.4:+73875623 MS.gene071900:CDS
GTTAAAGGTTGAAACTTTGG+AGG 0.498980 2.4:-73873647 None:intergenic
AGAAAAGCCCAAGCTCCAAC+CGG 0.499960 2.4:-73873907 None:intergenic
TGTAATTGCACCGAAAAGAT+TGG 0.500834 2.4:-73877193 None:intergenic
AAGTCACTTTCACTCTCTGC+TGG 0.503849 2.4:+73874207 MS.gene071900:CDS
TGAAGAACAGCCAATGAAGC+CGG 0.505209 2.4:-73877033 None:intergenic
GATTGTGATGATTTGAGTGA+TGG 0.506291 2.4:-73873613 None:intergenic
CGGCGTGGGATACCTTGGCT+TGG 0.507831 2.4:+73876905 MS.gene071900:CDS
CTGCATTTCTTGCCATGCAT+AGG 0.509976 2.4:+73877121 MS.gene071900:CDS
CAATGAAGCCGGCCAGCTCA+AGG 0.512178 2.4:-73877022 None:intergenic
CAAGCCAGTTGACAAACCTT+GGG 0.513135 2.4:+73876950 MS.gene071900:CDS
AACTTTGGAGGGAAAAGAGA+AGG 0.514985 2.4:-73873635 None:intergenic
TTTGAAGGTGGTGATTGTGA+AGG 0.521046 2.4:-73873718 None:intergenic
ATCGTTCTCCTTGAGCTGGC+CGG 0.521340 2.4:+73877014 MS.gene071900:CDS
AGAGAATTGAGATCTGAAGA+TGG 0.529793 2.4:-73873560 None:intergenic
TGAAGTGCAAAACTCTCCAT+TGG 0.529902 2.4:-73873472 None:intergenic
AGTGCTGTAGCTGCAATGCT+TGG 0.530608 2.4:+73876823 MS.gene071900:CDS
GCAAGAAGACAAACAAATGC+AGG 0.533080 2.4:-73875508 None:intergenic
AGCGGTTAGGAAAAGAGCGC+TGG 0.538132 2.4:-73875392 None:intergenic
GCAAGCCAGACTGGGCATGT+AGG 0.538403 2.4:+73877087 MS.gene071900:CDS
ATGGGATTGAACGTGAAGAT+GGG 0.539216 2.4:-73873594 None:intergenic
GATGGGATTGAACGTGAAGA+TGG 0.539385 2.4:-73873595 None:intergenic
TTAGCATGAATTGGGAAATG+GGG 0.542550 2.4:-73873682 None:intergenic
GCCTTAAACCACGTAACCCA+AGG 0.543186 2.4:-73875475 None:intergenic
AAAATCGGCGTGGGATACCT+TGG 0.547524 2.4:+73876900 MS.gene071900:CDS
GACACCAGCTGCCCTATGCA+TGG 0.551779 2.4:-73877133 None:intergenic
CCTAGTACTACTGCTAGAGC+TGG 0.554496 2.4:+73874162 MS.gene071900:CDS
GAGGTGTTGGCTCTATCTGG+TGG 0.556404 2.4:+73877753 MS.gene071900:CDS
TTCCAGTTTCTTTGCAGCCA+GGG 0.558615 2.4:-73875593 None:intergenic
CAAACCTTGGGATTGTGAGC+TGG 0.559194 2.4:+73876962 MS.gene071900:CDS
CCGGCAACGGGCTTAACACA+AGG 0.563775 2.4:-73873888 None:intergenic
GGTGGTGATTGTGAAGGTGG+TGG 0.567979 2.4:-73873712 None:intergenic
GAGAATTGAGATCTGAAGAT+GGG 0.569360 2.4:-73873559 None:intergenic
ATTGTGATGATTTGAGTGAT+GGG 0.571156 2.4:-73873612 None:intergenic
TTAAAGGTTGAAACTTTGGA+GGG 0.572665 2.4:-73873646 None:intergenic
GGAGAACGATCGAAGGCTGT+TGG 0.573491 2.4:-73877001 None:intergenic
GCTTGCCATACCCACTAGAA+TGG 0.574637 2.4:-73876932 None:intergenic
GCAAAGAAACTGGAAACGAT+GGG 0.575984 2.4:+73875601 MS.gene071900:CDS
ATTAATGCTGTCATCTGGGG+AGG 0.577151 2.4:+73877734 MS.gene071900:CDS
TTTATTAATGCTGTCATCTG+GGG 0.579403 2.4:+73877731 MS.gene071900:CDS
GGTGTGTCTTTAATTTCAGG+AGG 0.582059 2.4:-73875559 None:intergenic
TTTCAAACCCTTGGGTTACG+TGG 0.588383 2.4:+73875467 MS.gene071900:CDS
AGCTCCCAATCTCTTAGAGG+AGG 0.589921 2.4:-73874247 None:intergenic
TCTTGGCCTGACAACATCCG+TGG 0.589949 2.4:+73873927 MS.gene071900:CDS
CGTCTTAGGAGTCCTTGACT+GGG 0.590653 2.4:+73876861 MS.gene071900:CDS
AAGAACGATGATGATGATGA+TGG 0.591681 2.4:-73873531 None:intergenic
CAAGGCCAGCTATAGTTGAA+AGG 0.594470 2.4:-73873870 None:intergenic
GCTCTGTGTTAAATTAGCAC+AGG 0.596919 2.4:+73875429 MS.gene071900:CDS
TCAAGCAGTCATCCCAGTCA+AGG 0.602001 2.4:-73876873 None:intergenic
CAAGCTGCTGTATACTATGG+AGG 0.606951 2.4:+73877231 MS.gene071900:CDS
TGTGACATGTAACAGTCTGC+CGG 0.610671 2.4:+73875364 MS.gene071900:intron
GTTTGTGAAGACGGGTTTAG+GGG 0.614584 2.4:+73874041 MS.gene071900:CDS
GAGCTGGATGTCTGATTGTG+TGG 0.615254 2.4:+73876978 MS.gene071900:CDS
AGCTCAAGGAGAACGATCGA+AGG 0.615633 2.4:-73877008 None:intergenic
TAAATTAGCACAGGAGCTTG+GGG 0.618128 2.4:+73875438 MS.gene071900:CDS
TTGAAGTTACACCTCAAGCA+TGG 0.624236 2.4:+73873830 MS.gene071900:CDS
GCTCCCAATCTCTTAGAGGA+GGG 0.627182 2.4:-73874246 None:intergenic
CCTTAAACCACGTAACCCAA+GGG 0.627527 2.4:-73875474 None:intergenic
AGTACTACTGCTAGAGCTGG+TGG 0.631739 2.4:+73874165 MS.gene071900:CDS
ATGATGATGGAGGAAGAAGG+TGG 0.632362 2.4:-73873518 None:intergenic
TGATGATGGAGGAAGAAGGT+GGG 0.633718 2.4:-73873517 None:intergenic
GAAAGCAATTGCCATGCTTG+AGG 0.636430 2.4:-73873841 None:intergenic
ATTAGCACAGGAGCTTGGGG+TGG 0.642898 2.4:+73875441 MS.gene071900:CDS
TAGATCGTGTATAAAATCAA+CGG 0.643604 2.4:-73875535 None:intergenic
TAGAATGGCAAACCAAGCCA+AGG 0.647704 2.4:-73876917 None:intergenic
AAGCCAGACTGGGCATGTAG+GGG 0.658449 2.4:+73877089 MS.gene071900:CDS
ATGATGATGATGGAGGAAGA+AGG 0.661933 2.4:-73873521 None:intergenic
ACATCCAGCTCACAATCCCA+AGG 0.664594 2.4:-73876966 None:intergenic
GCAATTACACACTATAGCAG+TGG 0.666445 2.4:+73877207 MS.gene071900:CDS
CAAGCGCTGCGAGAGTACCA+GGG 0.706701 2.4:-73877155 None:intergenic
AGTCAAGGACTCCTAAGACG+AGG 0.716369 2.4:-73876858 None:intergenic
TGAAATTAAAGACACACCAG+AGG 0.727115 2.4:+73875564 MS.gene071900:CDS
GTAGTGGATGAAGAAATAAG+CGG 0.766547 2.4:-73877058 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATATATTAGTATTAATA+AGG - chr2.4:73876342-73876361 None:intergenic 10.0%
!! AGATATATTAGTATTAATAA+GGG - chr2.4:73876341-73876360 None:intergenic 10.0%
!! TTATTAATACTAATATATCT+TGG + chr2.4:73876341-73876360 MS.gene071900:intron 10.0%
!! ATTTCATCTAATAAATATAG+AGG - chr2.4:73874578-73874597 None:intergenic 15.0%
!! GATATATTAGTATTAATAAG+GGG - chr2.4:73876340-73876359 None:intergenic 15.0%
!! TAAAATTGACATATAAATAG+AGG + chr2.4:73874836-73874855 MS.gene071900:intron 15.0%
!! TTAAATATTCAACTGTAAAA+TGG - chr2.4:73874981-73875000 None:intergenic 15.0%
!! TTAGTTTATAATGTTATACA+CGG + chr2.4:73874357-73874376 MS.gene071900:intron 15.0%
!!! ATTATTTTTGATTGAGTAAA+TGG + chr2.4:73875727-73875746 MS.gene071900:intron 15.0%
!!! GAATAAAATACAATTTTACA+AGG - chr2.4:73875106-73875125 None:intergenic 15.0%
!!! GTAAAATTGTATTTTATTCT+TGG + chr2.4:73875107-73875126 MS.gene071900:intron 15.0%
!! AAAGAAAAACAGAAATCATA+TGG - chr2.4:73877282-73877301 None:intergenic 20.0%
!! AATACTAATATATCTTGGAA+CGG + chr2.4:73876346-73876365 MS.gene071900:intron 20.0%
!! ATACATGTAATGTAAATGTA+TGG - chr2.4:73877356-73877375 None:intergenic 20.0%
!! ATATAAATAGAGGTAACTTA+AGG + chr2.4:73874846-73874865 MS.gene071900:intron 20.0%
!! TAGCTTATGAAAAAAGTTAT+TGG + chr2.4:73876141-73876160 MS.gene071900:intron 20.0%
!! TCAAATTCACAAAGTATAAA+GGG - chr2.4:73877561-73877580 None:intergenic 20.0%
!! TTGTTCATGAAAAAAGAAAA+AGG - chr2.4:73874808-73874827 None:intergenic 20.0%
!!! CTTTTACTAATGAAGTTATT+TGG + chr2.4:73873986-73874005 MS.gene071900:CDS 20.0%
!!! TGTGTCTTTTATTCAAAATA+CGG - chr2.4:73874647-73874666 None:intergenic 20.0%
!!! TTAGACATTTTAATATACTC+AGG + chr2.4:73876372-73876391 MS.gene071900:intron 20.0%
! AATTATGTATTCTCACTTCT+CGG + chr2.4:73875249-73875268 MS.gene071900:intron 25.0%
! AGAGACAAAAAATTCTTCAA+GGG - chr2.4:73876265-73876284 None:intergenic 25.0%
! AGTGAAAGTGACTTAATAAT+AGG - chr2.4:73874201-73874220 None:intergenic 25.0%
! ATCAAGATTGAAATGACAAA+AGG - chr2.4:73873775-73873794 None:intergenic 25.0%
! ATCTAACATATATGTTAGCA+AGG - chr2.4:73874614-73874633 None:intergenic 25.0%
! ATTAAACTGTTTATCCAAGT+TGG + chr2.4:73876538-73876557 MS.gene071900:intron 25.0%
! ATTGAAATGACAAAAGGAAT+TGG - chr2.4:73873769-73873788 None:intergenic 25.0%
! ATTTAACCAAATAATCACTC+AGG + chr2.4:73874995-73875014 MS.gene071900:intron 25.0%
! ATTTATTAATGCTGTCATCT+GGG + chr2.4:73877730-73877749 MS.gene071900:CDS 25.0%
! CCTTTAACTCACAAAAATTA+GGG - chr2.4:73874739-73874758 None:intergenic 25.0%
! CTGAAAATATTGAACTTTGA+AGG + chr2.4:73875763-73875782 MS.gene071900:intron 25.0%
! CTTAATATACGTGGAAAAAA+AGG + chr2.4:73876451-73876470 MS.gene071900:intron 25.0%
! CTTCATTTCTGTTTGTTTAA+TGG + chr2.4:73877394-73877413 MS.gene071900:intron 25.0%
! GAAGTAGTTATGATTGAAAT+CGG + chr2.4:73874415-73874434 MS.gene071900:intron 25.0%
! GTCAAATTCACAAAGTATAA+AGG - chr2.4:73877562-73877581 None:intergenic 25.0%
! GTTAATATGCATATGAGAAA+AGG - chr2.4:73875853-73875872 None:intergenic 25.0%
! GTTCAGTGAAATTATAGTAT+AGG - chr2.4:73875285-73875304 None:intergenic 25.0%
! GTTGAATTCAATACTATCAT+TGG + chr2.4:73876762-73876781 MS.gene071900:intron 25.0%
! TACTATCATTGGTATTTCTT+TGG + chr2.4:73876773-73876792 MS.gene071900:intron 25.0%
! TAGAGACAAAAAATTCTTCA+AGG - chr2.4:73876266-73876285 None:intergenic 25.0%
! TAGATCGTGTATAAAATCAA+CGG - chr2.4:73875538-73875557 None:intergenic 25.0%
! TCCACGTATATTAAGAAAAA+TGG - chr2.4:73876446-73876465 None:intergenic 25.0%
! TCCTTTAACTCACAAAAATT+AGG - chr2.4:73874740-73874759 None:intergenic 25.0%
! TCTCATATGCATATTAACTT+TGG + chr2.4:73875855-73875874 MS.gene071900:intron 25.0%
! TGCATATTAACTTTGGATAT+AGG + chr2.4:73875862-73875881 MS.gene071900:intron 25.0%
! TGTTTGTTTAATGGTATAAC+TGG + chr2.4:73877403-73877422 MS.gene071900:intron 25.0%
!! GGTTATAATACCAATCTTTT+CGG + chr2.4:73877183-73877202 MS.gene071900:CDS 25.0%
!! TTTGTCATTTCAATCTTGAT+TGG + chr2.4:73873775-73873794 MS.gene071900:CDS 25.0%
!!! ACCATTTTTCTTAATATACG+TGG + chr2.4:73876442-73876461 MS.gene071900:intron 25.0%
!!! ACTTATTTTGTGAAATGGAT+GGG + chr2.4:73874075-73874094 MS.gene071900:CDS 25.0%
!!! ATTCAAAACGGGTTTTATTA+TGG + chr2.4:73877706-73877725 MS.gene071900:CDS 25.0%
!!! TACTTATTTTGTGAAATGGA+TGG + chr2.4:73874074-73874093 MS.gene071900:CDS 25.0%
!!! TATTGACTTTAGAACTAGTT+AGG + chr2.4:73874521-73874540 MS.gene071900:intron 25.0%
!!! TTGCTACTTATTTTGTGAAA+TGG + chr2.4:73874070-73874089 MS.gene071900:CDS 25.0%
!!! TTTGATTTTATGAGACATGA+TGG + chr2.4:73875206-73875225 MS.gene071900:intron 25.0%
AAAAACAGAAATCATATGGC+GGG - chr2.4:73877278-73877297 None:intergenic 30.0%
AACCGATTGTAATTTCTTGA+CGG - chr2.4:73874497-73874516 None:intergenic 30.0%
AAGGTTAAAGGTTGAAACTT+TGG - chr2.4:73873653-73873672 None:intergenic 30.0%
AATTAGCATGAATTGGGAAA+TGG - chr2.4:73873687-73873706 None:intergenic 30.0%
AGTAAATCCAAACCTGAAAT+TGG - chr2.4:73874287-73874306 None:intergenic 30.0%
ATCTATCCTGAGTGATTATT+TGG - chr2.4:73875004-73875023 None:intergenic 30.0%
ATTAGCATGAATTGGGAAAT+GGG - chr2.4:73873686-73873705 None:intergenic 30.0%
ATTGTGATGATTTGAGTGAT+GGG - chr2.4:73873615-73873634 None:intergenic 30.0%
CATTTATTAATGCTGTCATC+TGG + chr2.4:73877729-73877748 MS.gene071900:CDS 30.0%
CCTTCCTGATATATTCAAAA+CGG + chr2.4:73877694-73877713 MS.gene071900:CDS 30.0%
CTTCCTGATATATTCAAAAC+GGG + chr2.4:73877695-73877714 MS.gene071900:CDS 30.0%
GAAAAACAGAAATCATATGG+CGG - chr2.4:73877279-73877298 None:intergenic 30.0%
GAACTCTTACACATAAAAGA+AGG - chr2.4:73876692-73876711 None:intergenic 30.0%
GAGTTGAATTAGCATGAATT+GGG - chr2.4:73873693-73873712 None:intergenic 30.0%
TCAAAACCCAATATTCTTCA+AGG + chr2.4:73873736-73873755 MS.gene071900:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr2.4:73876014-73876033 None:intergenic 30.0%
TCTTATTCAGAACCAATTTC+AGG + chr2.4:73874272-73874291 MS.gene071900:CDS 30.0%
TGACTGCTTGAATGAAAAAT+CGG + chr2.4:73876885-73876904 MS.gene071900:CDS 30.0%
TTAAAGGTTGAAACTTTGGA+GGG - chr2.4:73873649-73873668 None:intergenic 30.0%
TTCCATCATGTTTAATTGAG+AGG - chr2.4:73874676-73874695 None:intergenic 30.0%
TTGTTTAATGGTATAACTGG+TGG + chr2.4:73877406-73877425 MS.gene071900:intron 30.0%
TTTATTAATGCTGTCATCTG+GGG + chr2.4:73877731-73877750 MS.gene071900:CDS 30.0%
TTTGCACCTTGAAGAATATT+GGG - chr2.4:73873745-73873764 None:intergenic 30.0%
! ATTTTCCTTTCAACTATAGC+TGG + chr2.4:73873865-73873884 MS.gene071900:CDS 30.0%
! CCAAAAGGCTATATTTGTTA+AGG + chr2.4:73877513-73877532 MS.gene071900:intron 30.0%
! CCCTAATTTTTGTGAGTTAA+AGG + chr2.4:73874736-73874755 MS.gene071900:intron 30.0%
! CCTTAACAAATATAGCCTTT+TGG - chr2.4:73877516-73877535 None:intergenic 30.0%
! TCTATCTGGTGGAAATTTTT+AGG + chr2.4:73877764-73877783 MS.gene071900:CDS 30.0%
!! AAACCCGTTTTGAATATATC+AGG - chr2.4:73877701-73877720 None:intergenic 30.0%
!! AGTACTTTAGGACTTTCTTA+TGG + chr2.4:73874102-73874121 MS.gene071900:CDS 30.0%
!! TGAAGAATATTGGGTTTTGA+AGG - chr2.4:73873736-73873755 None:intergenic 30.0%
!!! CAATTCTTGTTTTTAACAGC+TGG + chr2.4:73877662-73877681 MS.gene071900:intron 30.0%
!!! CTTATTTTGTGAAATGGATG+GGG + chr2.4:73874076-73874095 MS.gene071900:CDS 30.0%
!!! TCGGATGTTTTTTAATGATC+TGG + chr2.4:73874434-73874453 MS.gene071900:intron 30.0%
AACAAACAGAAATGAAGCGT+AGG - chr2.4:73877391-73877410 None:intergenic 35.0%
AATAAGCTGAAAACTCCCTA+TGG - chr2.4:73876099-73876118 None:intergenic 35.0%
ACAAACAGAAATGAAGCGTA+GGG - chr2.4:73877390-73877409 None:intergenic 35.0%
ACATCTTATGACATGTCCAT+AGG + chr2.4:73876080-73876099 MS.gene071900:intron 35.0%
AGAGAATTGAGATCTGAAGA+TGG - chr2.4:73873563-73873582 None:intergenic 35.0%
ATGCACCTAGTAAATTGCAT+AGG - chr2.4:73876299-73876318 None:intergenic 35.0%
CACCGTCAAGAAATTACAAT+CGG + chr2.4:73874492-73874511 MS.gene071900:intron 35.0%
CATCTTATGACATGTCCATA+GGG + chr2.4:73876081-73876100 MS.gene071900:intron 35.0%
CATGTTTAATTGAGAGGCAA+AGG - chr2.4:73874670-73874689 None:intergenic 35.0%
CTTTGCACCTTGAAGAATAT+TGG - chr2.4:73873746-73873765 None:intergenic 35.0%
GAGAATTGAGATCTGAAGAT+GGG - chr2.4:73873562-73873581 None:intergenic 35.0%
GAGCTAATTAGTTAATTCGC+AGG - chr2.4:73877305-73877324 None:intergenic 35.0%
GATTGTGATGATTTGAGTGA+TGG - chr2.4:73873616-73873635 None:intergenic 35.0%
GGAGTTGAATTAGCATGAAT+TGG - chr2.4:73873694-73873713 None:intergenic 35.0%
GTTAAAGGTTGAAACTTTGG+AGG - chr2.4:73873650-73873669 None:intergenic 35.0%
TACGTGGAAAAAAAGGTAAG+AGG + chr2.4:73876458-73876477 MS.gene071900:intron 35.0%
TGAAATTAAAGACACACCAG+AGG + chr2.4:73875564-73875583 MS.gene071900:CDS 35.0%
TGACATAAGCACTTGTGTTT+GGG + chr2.4:73876044-73876063 MS.gene071900:intron 35.0%
TGATTGAGTAAATGGTCTCA+TGG + chr2.4:73875735-73875754 MS.gene071900:intron 35.0%
TGCACCTAGTAAATTGCATA+GGG - chr2.4:73876298-73876317 None:intergenic 35.0%
TGCCTCTCAATTAAACATGA+TGG + chr2.4:73874671-73874690 MS.gene071900:intron 35.0%
TGCTTAGAAAAAGAGATGGA+GGG + chr2.4:73876481-73876500 MS.gene071900:intron 35.0%
TGTAATTGCACCGAAAAGAT+TGG - chr2.4:73877196-73877215 None:intergenic 35.0%
TGTGAGTTAAAGGAATGACT+TGG + chr2.4:73874746-73874765 MS.gene071900:intron 35.0%
TTAAATTAGCACAGGAGCTT+GGG + chr2.4:73875437-73875456 MS.gene071900:CDS 35.0%
TTAGCATGAATTGGGAAATG+GGG - chr2.4:73873685-73873704 None:intergenic 35.0%
TTATCAATACTCCTCGTCTT+AGG + chr2.4:73876847-73876866 MS.gene071900:CDS 35.0%
! AAGAACGATGATGATGATGA+TGG - chr2.4:73873534-73873553 None:intergenic 35.0%
! CTGTTTATCCAAGTTGGAAA+AGG + chr2.4:73876544-73876563 MS.gene071900:intron 35.0%
! TCTGGTGTGTCTTTAATTTC+AGG - chr2.4:73875565-73875584 None:intergenic 35.0%
!! CACACAAAATGAATGGGTTA+TGG + chr2.4:73875630-73875649 MS.gene071900:CDS 35.0%
!! CCGTTTTGAATATATCAGGA+AGG - chr2.4:73877697-73877716 None:intergenic 35.0%
!! GTAGTGGATGAAGAAATAAG+CGG - chr2.4:73877061-73877080 None:intergenic 35.0%
!! TCTTGATTGGTCTCATTGTA+AGG + chr2.4:73873788-73873807 MS.gene071900:CDS 35.0%
!! TTCAGAACCAATTTCAGGTT+TGG + chr2.4:73874277-73874296 MS.gene071900:intron 35.0%
!!! AGAATATTGGGTTTTGAAGG+TGG - chr2.4:73873733-73873752 None:intergenic 35.0%
!!! CTCACTTTTTACTCTACTTC+AGG + chr2.4:73874309-73874328 MS.gene071900:intron 35.0%
!!! GGGTTTTGAGAAAAGGTTAA+AGG - chr2.4:73873665-73873684 None:intergenic 35.0%
!!! TTATCATTGTTTTAGCCTCC+AGG + chr2.4:73875819-73875838 MS.gene071900:intron 35.0%
AAAAGCTCCCAATCTCTTAG+AGG - chr2.4:73874253-73874272 None:intergenic 40.0%
AGCACTAAATGCAGCTGTAA+AGG - chr2.4:73873968-73873987 None:intergenic 40.0%
AGCTGCAATTAGTGACCAAA+AGG + chr2.4:73877498-73877517 MS.gene071900:intron 40.0%
ATAGTTAGGACAGAGGGAAT+AGG - chr2.4:73876237-73876256 None:intergenic 40.0%
ATGGGATTGAACGTGAAGAT+GGG - chr2.4:73873597-73873616 None:intergenic 40.0%
CAACCAAGAAATACAGCAAG+TGG - chr2.4:73875315-73875334 None:intergenic 40.0%
CAAGAAATACAGCAAGTGGA+AGG - chr2.4:73875311-73875330 None:intergenic 40.0%
CACCTAGTAAATTGCATAGG+GGG - chr2.4:73876296-73876315 None:intergenic 40.0%
CAGACTGTTACATGTCACAA+AGG - chr2.4:73875363-73875382 None:intergenic 40.0%
CAGTCTCTTTGTGGATCTTT+GGG + chr2.4:73875671-73875690 MS.gene071900:CDS 40.0%
CCCTGTCACACAAAATGAAT+GGG + chr2.4:73875624-73875643 MS.gene071900:CDS 40.0%
CTGACATAAGCACTTGTGTT+TGG + chr2.4:73876043-73876062 MS.gene071900:intron 40.0%
CTTCAAGGGAGCTTATAGTT+AGG - chr2.4:73876251-73876270 None:intergenic 40.0%
CTTGAATGAAAAATCGGCGT+GGG + chr2.4:73876891-73876910 MS.gene071900:CDS 40.0%
GACTTGCACAGGTATAGTTT+GGG - chr2.4:73876663-73876682 None:intergenic 40.0%
GAGCTTATAGTTAGGACAGA+GGG - chr2.4:73876243-73876262 None:intergenic 40.0%
GCAAAGAAACTGGAAACGAT+GGG + chr2.4:73875601-73875620 MS.gene071900:CDS 40.0%
GCAAGAAGACAAACAAATGC+AGG - chr2.4:73875511-73875530 None:intergenic 40.0%
GCAATTACACACTATAGCAG+TGG + chr2.4:73877207-73877226 MS.gene071900:CDS 40.0%
GCACCTAGTAAATTGCATAG+GGG - chr2.4:73876297-73876316 None:intergenic 40.0%
GCTCTGTGTTAAATTAGCAC+AGG + chr2.4:73875429-73875448 MS.gene071900:CDS 40.0%
GGTGGTAATTTCAAACCCTT+GGG + chr2.4:73875459-73875478 MS.gene071900:CDS 40.0%
GTGCTTAGAAAAAGAGATGG+AGG + chr2.4:73876480-73876499 MS.gene071900:intron 40.0%
GTTAAATTAGCACAGGAGCT+TGG + chr2.4:73875436-73875455 MS.gene071900:CDS 40.0%
TAAATTAGCACAGGAGCTTG+GGG + chr2.4:73875438-73875457 MS.gene071900:CDS 40.0%
TGAGAAAAGGAGCTTAAACC+TGG - chr2.4:73875840-73875859 None:intergenic 40.0%
TGCAAAGAAACTGGAAACGA+TGG + chr2.4:73875600-73875619 MS.gene071900:CDS 40.0%
TGCATTTCTTGCCATGCATA+GGG + chr2.4:73877122-73877141 MS.gene071900:CDS 40.0%
TTGAAGTTACACCTCAAGCA+TGG + chr2.4:73873830-73873849 MS.gene071900:CDS 40.0%
TTTGAAGGTGGTGATTGTGA+AGG - chr2.4:73873721-73873740 None:intergenic 40.0%
! AACTTTGGAGGGAAAAGAGA+AGG - chr2.4:73873638-73873657 None:intergenic 40.0%
! ACCCATTCATTTTGTGTGAC+AGG - chr2.4:73875628-73875647 None:intergenic 40.0%
! ATTTCCATAAGCTGACTCAC+TGG + chr2.4:73876116-73876135 MS.gene071900:intron 40.0%
! CCCATTCATTTTGTGTGACA+GGG - chr2.4:73875627-73875646 None:intergenic 40.0%
! GAAGGTATAATGACTTGCAC+AGG - chr2.4:73876674-73876693 None:intergenic 40.0%
! GAGGTGCTTAGAAAAAGAGA+TGG + chr2.4:73876477-73876496 MS.gene071900:intron 40.0%
! GGTGTAACTTCAACTGGTTT+AGG - chr2.4:73873823-73873842 None:intergenic 40.0%
! GGTGTGTCTTTAATTTCAGG+AGG - chr2.4:73875562-73875581 None:intergenic 40.0%
! GGTTAGAGTTTTTGTGACCA+CGG - chr2.4:73873947-73873966 None:intergenic 40.0%
! TGACTTGCACAGGTATAGTT+TGG - chr2.4:73876664-73876683 None:intergenic 40.0%
! TTTCCATAAGCTGACTCACT+GGG + chr2.4:73876117-73876136 MS.gene071900:intron 40.0%
!! AACGATGATGATGATGATGG+AGG - chr2.4:73873531-73873550 None:intergenic 40.0%
!! ATATCGTTTTTCTTCGCTCG+CGG + chr2.4:73874018-73874037 MS.gene071900:CDS 40.0%
!! ATGATGATGATGGAGGAAGA+AGG - chr2.4:73873524-73873543 None:intergenic 40.0%
!! CTTCCACTTGCTGTATTTCT+TGG + chr2.4:73875309-73875328 MS.gene071900:intron 40.0%
!!! GGAAATGGGGTTTTGAGAAA+AGG - chr2.4:73873672-73873691 None:intergenic 40.0%
AATCCAAACAGGCCCTAAGT+GGG - chr2.4:73876003-73876022 None:intergenic 45.0%
AATGAGTGGAGTGGGATACA+TGG - chr2.4:73875145-73875164 None:intergenic 45.0%
ACAGAAATGAAGCGTAGGGA+AGG - chr2.4:73877386-73877405 None:intergenic 45.0%
AGCCCCCTATGCAATTTACT+AGG + chr2.4:73876291-73876310 MS.gene071900:intron 45.0%
ATGTATCCCACTCCACTCAT+TGG + chr2.4:73875144-73875163 MS.gene071900:intron 45.0%
ATTAATGCTGTCATCTGGGG+AGG + chr2.4:73877734-73877753 MS.gene071900:CDS 45.0%
CAAGCCAGTTGACAAACCTT+GGG + chr2.4:73876950-73876969 MS.gene071900:CDS 45.0%
CAAGCTGCTGTATACTATGG+AGG + chr2.4:73877231-73877250 MS.gene071900:CDS 45.0%
CAAGGCCAGCTATAGTTGAA+AGG - chr2.4:73873873-73873892 None:intergenic 45.0%
CAATCCCAAGGTTTGTCAAC+TGG - chr2.4:73876957-73876976 None:intergenic 45.0%
CCTTAAACCACGTAACCCAA+GGG - chr2.4:73875477-73875496 None:intergenic 45.0%
CTCAGATGATATTGCCACCT+TGG + chr2.4:73875068-73875087 MS.gene071900:intron 45.0%
CTCTTAGAGGAGGGACTATT+AGG - chr2.4:73874240-73874259 None:intergenic 45.0%
CTGCATTTCTTGCCATGCAT+AGG + chr2.4:73877121-73877140 MS.gene071900:CDS 45.0%
CTTATCCCAATGAGTGGAGT+GGG - chr2.4:73875153-73875172 None:intergenic 45.0%
CTTGTGTTTGGGAGAGCTTA+TGG + chr2.4:73876055-73876074 MS.gene071900:intron 45.0%
GAAAAGGAGCTTAAACCTGG+AGG - chr2.4:73875837-73875856 None:intergenic 45.0%
GAAAGCAATTGCCATGCTTG+AGG - chr2.4:73873844-73873863 None:intergenic 45.0%
GATGGGATTGAACGTGAAGA+TGG - chr2.4:73873598-73873617 None:intergenic 45.0%
GCAGTCTCTTTGTGGATCTT+TGG + chr2.4:73875670-73875689 MS.gene071900:CDS 45.0%
GCCCTGTCACACAAAATGAA+TGG + chr2.4:73875623-73875642 MS.gene071900:CDS 45.0%
GCTTGAATGAAAAATCGGCG+TGG + chr2.4:73876890-73876909 MS.gene071900:CDS 45.0%
GCTTGAGGTGTAACTTCAAC+TGG - chr2.4:73873829-73873848 None:intergenic 45.0%
GGAGCTTATAGTTAGGACAG+AGG - chr2.4:73876244-73876263 None:intergenic 45.0%
GGGTGGTAATTTCAAACCCT+TGG + chr2.4:73875458-73875477 MS.gene071900:CDS 45.0%
GGTCAAGCTGCTGTATACTA+TGG + chr2.4:73877228-73877247 MS.gene071900:CDS 45.0%
TAGAATGGCAAACCAAGCCA+AGG - chr2.4:73876920-73876939 None:intergenic 45.0%
TATCCCAGTGAGTCAGCTTA+TGG - chr2.4:73876123-73876142 None:intergenic 45.0%
TGAAGAACAGCCAATGAAGC+CGG - chr2.4:73877036-73877055 None:intergenic 45.0%
TGCTTCTTGCAGTCTCTTTG+TGG + chr2.4:73875662-73875681 MS.gene071900:CDS 45.0%
TGTATCCCACTCCACTCATT+GGG + chr2.4:73875145-73875164 MS.gene071900:intron 45.0%
TGTGACATGTAACAGTCTGC+CGG + chr2.4:73875364-73875383 MS.gene071900:intron 45.0%
TTCCAGTTTCTTTGCAGCCA+GGG - chr2.4:73875596-73875615 None:intergenic 45.0%
TTTCAAACCCTTGGGTTACG+TGG + chr2.4:73875467-73875486 MS.gene071900:CDS 45.0%
TTTCCAGTTTCTTTGCAGCC+AGG - chr2.4:73875597-73875616 None:intergenic 45.0%
! AAGTCACTTTCACTCTCTGC+TGG + chr2.4:73874207-73874226 MS.gene071900:CDS 45.0%
! ACCTTTTTGCAAGCCAGACT+GGG + chr2.4:73877079-73877098 MS.gene071900:CDS 45.0%
! AGTCCCTCCTCTAAGAGATT+GGG + chr2.4:73874243-73874262 MS.gene071900:CDS 45.0%
! AGTCGATGCCTTTTCCAACT+TGG - chr2.4:73876555-73876574 None:intergenic 45.0%
! GGTGGTGGTTGTTGTTGTAT+TGG + chr2.4:73875177-73875196 MS.gene071900:intron 45.0%
! GGTTTGTGAAGACGGGTTTA+GGG + chr2.4:73874040-73874059 MS.gene071900:CDS 45.0%
! GTTTGCCATTCTAGTGGGTA+TGG + chr2.4:73876927-73876946 MS.gene071900:CDS 45.0%
! GTTTGTGAAGACGGGTTTAG+GGG + chr2.4:73874041-73874060 MS.gene071900:CDS 45.0%
! TACCTTTTTGCAAGCCAGAC+TGG + chr2.4:73877078-73877097 MS.gene071900:CDS 45.0%
! TAGTCCCTCCTCTAAGAGAT+TGG + chr2.4:73874242-73874261 MS.gene071900:CDS 45.0%
! TCTGGCTTGCAAAAAGGTAG+TGG - chr2.4:73877077-73877096 None:intergenic 45.0%
!! ATGATGATGGAGGAAGAAGG+TGG - chr2.4:73873521-73873540 None:intergenic 45.0%
!! GAACGTGAAGATGGGTTTTG+TGG - chr2.4:73873589-73873608 None:intergenic 45.0%
!! GCTTGGTTTGCCATTCTAGT+GGG + chr2.4:73876922-73876941 MS.gene071900:CDS 45.0%
!! TATCGTTTTTCTTCGCTCGC+GGG + chr2.4:73874019-73874038 MS.gene071900:CDS 45.0%
!! TGATGATGGAGGAAGAAGGT+GGG - chr2.4:73873520-73873539 None:intergenic 45.0%
!! TGGATGGGGAAGAGTACTTT+AGG + chr2.4:73874090-73874109 MS.gene071900:CDS 45.0%
!! AAAATTCTAATAAAATATTA+TGG + chr2.4:73875953-73875972 MS.gene071900:intron 5.0%
!!! CAATTTTTTTTTTTTTTTAA+TGG + chr2.4:73874898-73874917 MS.gene071900:intron 5.0%
AAAATCGGCGTGGGATACCT+TGG + chr2.4:73876900-73876919 MS.gene071900:CDS 50.0%
ACATCCAGCTCACAATCCCA+AGG - chr2.4:73876969-73876988 None:intergenic 50.0%
AGAAAAGCCCAAGCTCCAAC+CGG - chr2.4:73873910-73873929 None:intergenic 50.0%
AGCTCAAGGAGAACGATCGA+AGG - chr2.4:73877011-73877030 None:intergenic 50.0%
AGCTCCCAATCTCTTAGAGG+AGG - chr2.4:73874250-73874269 None:intergenic 50.0%
AGTACTACTGCTAGAGCTGG+TGG + chr2.4:73874165-73874184 MS.gene071900:CDS 50.0%
AGTCAAGGACTCCTAAGACG+AGG - chr2.4:73876861-73876880 None:intergenic 50.0%
AGTGCTGTAGCTGCAATGCT+TGG + chr2.4:73876823-73876842 MS.gene071900:CDS 50.0%
ATCCAAACAGGCCCTAAGTG+GGG - chr2.4:73876002-73876021 None:intergenic 50.0%
CAAACCTTGGGATTGTGAGC+TGG + chr2.4:73876962-73876981 MS.gene071900:CDS 50.0%
CAATCCAAACAGGCCCTAAG+TGG - chr2.4:73876004-73876023 None:intergenic 50.0%
CCACTCATTGGGATAAGGCT+TGG + chr2.4:73875156-73875175 MS.gene071900:intron 50.0%
CCACTCCACTCATTGGGATA+AGG + chr2.4:73875151-73875170 MS.gene071900:intron 50.0%
CCCTTGGGTTACGTGGTTTA+AGG + chr2.4:73875474-73875493 MS.gene071900:CDS 50.0%
CCTAGTACTACTGCTAGAGC+TGG + chr2.4:73874162-73874181 MS.gene071900:CDS 50.0%
CCTTATCCCAATGAGTGGAG+TGG - chr2.4:73875154-73875173 None:intergenic 50.0%
CGTCTTAGGAGTCCTTGACT+GGG + chr2.4:73876861-73876880 MS.gene071900:CDS 50.0%
CTCATTGGGATAAGGCTTGG+TGG + chr2.4:73875159-73875178 MS.gene071900:intron 50.0%
GAAGGTGGGTGAAGAAGTTG+TGG - chr2.4:73873506-73873525 None:intergenic 50.0%
GAAGGTGGTGATTGTGAAGG+TGG - chr2.4:73873718-73873737 None:intergenic 50.0%
GAGCTGGATGTCTGATTGTG+TGG + chr2.4:73876978-73876997 MS.gene071900:CDS 50.0%
GCAAGCCAGTTGACAAACCT+TGG + chr2.4:73876949-73876968 MS.gene071900:CDS 50.0%
GCAGTAGTACTAGGCATAGC+AGG - chr2.4:73874156-73874175 None:intergenic 50.0%
GCCTTAAACCACGTAACCCA+AGG - chr2.4:73875478-73875497 None:intergenic 50.0%
GCTCCCAATCTCTTAGAGGA+GGG - chr2.4:73874249-73874268 None:intergenic 50.0%
GCTTGCCATACCCACTAGAA+TGG - chr2.4:73876935-73876954 None:intergenic 50.0%
TCAAGCAGTCATCCCAGTCA+AGG - chr2.4:73876876-73876895 None:intergenic 50.0%
TCGTCTTAGGAGTCCTTGAC+TGG + chr2.4:73876860-73876879 MS.gene071900:CDS 50.0%
TTCGATCGTTCTCCTTGAGC+TGG + chr2.4:73877010-73877029 MS.gene071900:CDS 50.0%
TTGTGACCACGGATGTTGTC+AGG - chr2.4:73873936-73873955 None:intergenic 50.0%
! CAAGGCAAAAGCGTACACCA+AGG - chr2.4:73875088-73875107 None:intergenic 50.0%
! CCAAGCCTTATCCCAATGAG+TGG - chr2.4:73875159-73875178 None:intergenic 50.0%
! CCAGCTCTAGCAGTAGTACT+AGG - chr2.4:73874165-73874184 None:intergenic 50.0%
! GAGCAGATTTTGAGCAGCAG+CGG - chr2.4:73875413-73875432 None:intergenic 50.0%
! GATTTTGAGCAGCAGCGGTT+AGG - chr2.4:73875408-73875427 None:intergenic 50.0%
! GGCTTCATTGGCTGTTCTTC+AGG + chr2.4:73877035-73877054 MS.gene071900:CDS 50.0%
! GGGTTTGTGAAGACGGGTTT+AGG + chr2.4:73874039-73874058 MS.gene071900:CDS 50.0%
! GTTGGAGCTTGGGCTTTTCT+TGG + chr2.4:73873910-73873929 MS.gene071900:CDS 50.0%
! TGGCGGGCGTGTTATAGATA+GGG - chr2.4:73877262-73877281 None:intergenic 50.0%
! TGGTCTTGCAGAGAGACTCT+TGG + chr2.4:73876793-73876812 MS.gene071900:intron 50.0%
!! ATGGCGGGCGTGTTATAGAT+AGG - chr2.4:73877263-73877282 None:intergenic 50.0%
!! ATTGGGATAAGGCTTGGTGG+TGG + chr2.4:73875162-73875181 MS.gene071900:intron 50.0%
!! GAAAAGAGCGCTGGAGTTAC+CGG - chr2.4:73875386-73875405 None:intergenic 50.0%
!! GGCTTGGTTTGCCATTCTAG+TGG + chr2.4:73876921-73876940 MS.gene071900:CDS 50.0%
AAACAGGCCCTAAGTGGGGT+TGG - chr2.4:73875998-73876017 None:intergenic 55.0%
AACCCCACTTAGGGCCTGTT+TGG + chr2.4:73875997-73876016 MS.gene071900:intron 55.0%
AAGCCAGACTGGGCATGTAG+GGG + chr2.4:73877089-73877108 MS.gene071900:CDS 55.0%
ACTCTCGCAGCGCTTGCTTT+AGG + chr2.4:73877162-73877181 MS.gene071900:CDS 55.0%
AGTTTCTTTGCAGCCAGGGC+AGG - chr2.4:73875592-73875611 None:intergenic 55.0%
ATCGTTCTCCTTGAGCTGGC+CGG + chr2.4:73877014-73877033 MS.gene071900:CDS 55.0%
ATTAGCACAGGAGCTTGGGG+TGG + chr2.4:73875441-73875460 MS.gene071900:CDS 55.0%
CAAGCCAGACTGGGCATGTA+GGG + chr2.4:73877088-73877107 MS.gene071900:CDS 55.0%
CACGTAGCCAACCCCACTTA+GGG + chr2.4:73875988-73876007 MS.gene071900:intron 55.0%
CCTTGTGTTAAGCCCGTTGC+CGG + chr2.4:73873888-73873907 MS.gene071900:CDS 55.0%
GGAGAACGATCGAAGGCTGT+TGG - chr2.4:73877004-73877023 None:intergenic 55.0%
GGTGGTGATTGTGAAGGTGG+TGG - chr2.4:73873715-73873734 None:intergenic 55.0%
TCTTGGCCTGACAACATCCG+TGG + chr2.4:73873927-73873946 MS.gene071900:CDS 55.0%
TGCCCTGGCTGCAAAGAAAC+TGG + chr2.4:73875591-73875610 MS.gene071900:CDS 55.0%
! AGCGGTTAGGAAAAGAGCGC+TGG - chr2.4:73875395-73875414 None:intergenic 55.0%
! GCCCAGTCTGGCTTGCAAAA+AGG - chr2.4:73877083-73877102 None:intergenic 55.0%
! GGCAAAAGCGTACACCAAGG+TGG - chr2.4:73875085-73875104 None:intergenic 55.0%
!! GAGGTGTTGGCTCTATCTGG+TGG + chr2.4:73877753-73877772 MS.gene071900:CDS 55.0%
AAGCCCCTACATGCCCAGTC+TGG - chr2.4:73877095-73877114 None:intergenic 60.0%
CAATGAAGCCGGCCAGCTCA+AGG - chr2.4:73877025-73877044 None:intergenic 60.0%
CCACGTAGCCAACCCCACTT+AGG + chr2.4:73875987-73876006 MS.gene071900:intron 60.0%
CGCTCGCGGGTTTGTGAAGA+CGG + chr2.4:73874032-73874051 MS.gene071900:CDS 60.0%
CTTGCCATGCATAGGGCAGC+TGG + chr2.4:73877129-73877148 MS.gene071900:CDS 60.0%
GACACCAGCTGCCCTATGCA+TGG - chr2.4:73877136-73877155 None:intergenic 60.0%
GCAAGCCAGACTGGGCATGT+AGG + chr2.4:73877087-73877106 MS.gene071900:CDS 60.0%
GCTCGCGGGTTTGTGAAGAC+GGG + chr2.4:73874033-73874052 MS.gene071900:CDS 60.0%
GTGTTAAGCCCGTTGCCGGT+TGG + chr2.4:73873892-73873911 MS.gene071900:CDS 60.0%
! CCGGCAACGGGCTTAACACA+AGG - chr2.4:73873891-73873910 None:intergenic 60.0%
! CTTGAGCTGGCCGGCTTCAT+TGG + chr2.4:73877023-73877042 MS.gene071900:CDS 60.0%
! GCTGTCATCTGGGGAGGTGT+TGG + chr2.4:73877740-73877759 MS.gene071900:CDS 60.0%
!! CAAGCGCTGCGAGAGTACCA+GGG - chr2.4:73877158-73877177 None:intergenic 60.0%
!! CCTAAGTGGGGTTGGCTACG+TGG - chr2.4:73875990-73876009 None:intergenic 60.0%
!! GGGGAGGTGTTGGCTCTATC+TGG + chr2.4:73877750-73877769 MS.gene071900:CDS 60.0%
CATAGGGCAGCTGGTGTCCC+TGG + chr2.4:73877138-73877157 MS.gene071900:CDS 65.0%
CCCAAGCTCCAACCGGCAAC+GGG - chr2.4:73873903-73873922 None:intergenic 65.0%
CGGCGTGGGATACCTTGGCT+TGG + chr2.4:73876905-73876924 MS.gene071900:CDS 65.0%
GCCCAAGCTCCAACCGGCAA+CGG - chr2.4:73873904-73873923 None:intergenic 65.0%
! CCCGTTGCCGGTTGGAGCTT+GGG + chr2.4:73873900-73873919 MS.gene071900:CDS 65.0%
!! GCAAGCGCTGCGAGAGTACC+AGG - chr2.4:73877159-73877178 None:intergenic 65.0%
! GCCCGTTGCCGGTTGGAGCT+TGG + chr2.4:73873899-73873918 MS.gene071900:CDS 70.0%
!! CACACCAGAGGCACCTGCCC+TGG + chr2.4:73875576-73875595 MS.gene071900:CDS 70.0%
GCAGCCAGGGCAGGTGCCTC+TGG - chr2.4:73875583-73875602 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 73873475 73877796 73873475 ID=MS.gene071900
chr2.4 mRNA 73873475 73877796 73873475 ID=MS.gene071900.t1;Parent=MS.gene071900
chr2.4 exon 73873475 73874293 73873475 ID=MS.gene071900.t1.exon1;Parent=MS.gene071900.t1
chr2.4 CDS 73873475 73874293 73873475 ID=cds.MS.gene071900.t1;Parent=MS.gene071900.t1
chr2.4 exon 73875379 73875692 73875379 ID=MS.gene071900.t1.exon2;Parent=MS.gene071900.t1
chr2.4 CDS 73875379 73875692 73875379 ID=cds.MS.gene071900.t1;Parent=MS.gene071900.t1
chr2.4 exon 73876804 73877252 73876804 ID=MS.gene071900.t1.exon3;Parent=MS.gene071900.t1
chr2.4 CDS 73876804 73877252 73876804 ID=cds.MS.gene071900.t1;Parent=MS.gene071900.t1
chr2.4 exon 73877681 73877796 73877681 ID=MS.gene071900.t1.exon4;Parent=MS.gene071900.t1
chr2.4 CDS 73877681 73877796 73877681 ID=cds.MS.gene071900.t1;Parent=MS.gene071900.t1
Gene Sequence

>MS.gene071900

ATGGAGAGTTTTGCACTTCACTCACTCTCCACAACTTCTTCACCCACCTTCTTCCTCCATCATCATCATCATCGTTCTTCACGACCCATCTTCAGATCTCAATTCTCTCTTCCACAAAACCCATCTTCACGTTCAATCCCATCACTCAAATCATCACAATCCTTCTCTTTTCCCTCCAAAGTTTCAACCTTTAACCTTTTCTCAAAACCCCATTTCCCAATTCATGCTAATTCAACTCCACCACCTTCACAATCACCACCTTCAAAACCCAATATTCTTCAAGGTGCAAAGCCAATTCCTTTTGTCATTTCAATCTTGATTGGTCTCATTGTAAGGTTCTTTGTTCCTAAACCAGTTGAAGTTACACCTCAAGCATGGCAATTGCTTTCAATTTTCCTTTCAACTATAGCTGGCCTTGTGTTAAGCCCGTTGCCGGTTGGAGCTTGGGCTTTTCTTGGCCTGACAACATCCGTGGTCACAAAAACTCTAACCTTTACAGCTGCATTTAGTGCTTTTACTAATGAAGTTATTTGGTTGATTGTGATATCGTTTTTCTTCGCTCGCGGGTTTGTGAAGACGGGTTTAGGGGATAGAATTGCTACTTATTTTGTGAAATGGATGGGGAAGAGTACTTTAGGACTTTCTTATGGTTTGACATTTAGTGAAGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCTAGAGCTGGTGGTGTTTTTTTGCCTATTATTAAGTCACTTTCACTCTCTGCTGGTAGTGAACCTAATAGTCCCTCCTCTAAGAGATTGGGAGCTTTTCTTATTCAGAACCAATTTCAGGTTTGGATTTACTCTCTCACTTTTTACTCTACTTCAGGTTAAGAGCTTAGTTTTGATATAATGTTAGTTTATAATGTTATACACGGTCAACAAACTACAATCGATTATATGATTGAATTGAGAAGTAGTTATGATTGAAATCGGATGTTTTTTAATGATCTGGTGACTGTGAATATAATGTGAGTTTAAAATGTTCTACACCGTCAAGAAATTACAATCGGTTATATTATTGACTTTAGAACTAGTTAGGATTGAAATCAAATGTTTTTAACGATCTGACACCTCTATATTTATTAGATGAAATGAAATTGTGTTCACCTTGCTAACATATATGTTAGATCACACATACACCGTATTTTGAATAAAAGACACACCTTTGCCTCTCAATTAAACATGATGGAAAGTGTGTCATTTAAGTACAATTCAGAGAAAGTGTGCTTTTCCCTAATTTTTGTGAGTTAAAGGAATGACTTGGCATGCTGTGATTACTGCAATACAAGCATGATCATTTCCTTTTTCTTTTTTCATGAACAATTCAATTATAAAATTGACATATAAATAGAGGTAACTTAAGGAGTTAATATAAGAACGTTTGATTTGAATGCAATTTTTTTTTTTTTTTAATGGAAAGTTCTATGACAAAATTTTCAGATGATTTAGTGAATACATTGAAGTGAAAAAAAACCATTTTACAGTTGAATATTTAACCAAATAATCACTCAGGATAGATTTCATGACATTTGTTTTTTCAAATTTCGCTTTCTTGTGAAACAACTCAGATGATATTGCCACCTTGGTGTACGCTTTTGCCTTGTAAAATTGTATTTTATTCTTGGTTCTGTTTTGATCCATGTATCCCACTCCACTCATTGGGATAAGGCTTGGTGGTGGTTGTTGTTGTATTGGTTGTGTTTTGATTTTATGAGACATGATGGCTTTCTGTATTGCTTTTTATAATTATGTATTCTCACTTCTCGGCAATGATCATCCTATACTATAATTTCACTGAACTCTCCTTCCACTTGCTGTATTTCTTGGTTGTGTCAATGAAATAACTTTTGTGTTGCCTTTGTGACATGTAACAGTCTGCCGGTAACTCCAGCGCTCTTTTCCTAACCGCTGCTGCTCAAAATCTGCTCTGTGTTAAATTAGCACAGGAGCTTGGGGTGGTAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTTTACCTGCATTTGTTTGTCTTCTTGCTACACCGTTGATTTTATACACGATCTATCCTCCTGAAATTAAAGACACACCAGAGGCACCTGCCCTGGCTGCAAAGAAACTGGAAACGATGGGCCCTGTCACACAAAATGAATGGGTTATGGTTGCTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGGTATGTCATATGCTTTCTACTGCATTAGTCTATCATTATTTTTGATTGAGTAAATGGTCTCATGGTGATGCTGAAAATATTGAACTTTGAAGGAAGAGTGTTTCTTCAAGTAATAATTTATAGTTTTTATCATTGTTTTAGCCTCCAGGTTTAAGCTCCTTTTCTCATATGCATATTAACTTTGGATATAGGAAATAATTGCTCTTTCGTTGAACATGAATTCTAATAAAATATTCTAATAACTAATCATATCAATAAAAAAAATTCTAATAAAATATTATGGTGCAATTTAATCCACGTAGCCAACCCCACTTAGGGCCTGTTTGGATTGACTTATTTGAGTTTATTTACTGACATAAGCACTTGTGTTTGGGAGAGCTTATGGAAACATCTTATGACATGTCCATAGGGAGTTTTCAGCTTATTTCCATAAGCTGACTCACTGGGATAGCTTATGAAAAAAGTTATTGGCTATTACTTGTATGAAAATTATCTTACTTTATTTTAAATTTTTGTTATAGAAATAGCTTATATATTAACACCTATTCCCTCTGTCCTAACTATAAGCTCCCTTGAAGAATTTTTTGTCTCTAAATTTAGCCCCCTATGCAATTTACTAGGTGCATTTTTTTTCTTCATACATGCCCCTTATTAATACTAATATATCTTGGAACGGAAGTTAGACATTTTAATATACTCAGGATATTATAAGAAGATCTACATACAAAAAGAACACATTAAATTCACTAACCATTTTTCTTAATATACGTGGAAAAAAAGGTAAGAGGTGCTTAGAAAAAGAGATGGAGGGAGTATATGATAAGCGCTTATATTATCAGTGCTTAATTAAACTGTTTATCCAAGTTGGAAAAGGCATCGACTGTTGTTGCGTATAATAAGTTATGATTATGATGTGATATCGTCATATCATTTGCAAATAGTTGTAGTTTATTTTATTTGATGTCTTCCCAAACTATACCTGTGCAAGTCATTATACCTTCTTTTATGTGTAAGAGTTCACTTGCTACATCTGTAGATTGTTGTTTCTCTCACAATGCAATTTCAACTAGTTGAATTCAATACTATCATTGGTATTTCTTTGGTCTTGCAGAGAGACTCTTGGCATAGCAAGTGCTGTAGCTGCAATGCTTGGTTTATCAATACTCCTCGTCTTAGGAGTCCTTGACTGGGATGACTGCTTGAATGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCATTCTAGTGGGTATGGCAAGCCAGTTGACAAACCTTGGGATTGTGAGCTGGATGTCTGATTGTGTGGCCAACAGCCTTCGATCGTTCTCCTTGAGCTGGCCGGCTTCATTGGCTGTTCTTCAGGCCGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCATGTAGGGGCTTTATACTCTGCATTTCTTGCCATGCATAGGGCAGCTGGTGTCCCTGGTACTCTCGCAGCGCTTGCTTTAGGTTATAATACCAATCTTTTCGGTGCAATTACACACTATAGCAGTGGTCAAGCTGCTGTATACTATGGAGGTTTGTCCCTATCTATAACACGCCCGCCATATGATTTCTGTTTTTCTTTCCTGCGAATTAACTAATTAGCTCACATTTTTTCAGTAACTTTGTTTCAATTCCATACATTTACATTACATGTATTATTTATCCTTCCCTACGCTTCATTTCTGTTTGTTTAATGGTATAACTGGTGGATAGAAAATTATTTGTGATTTCAAAAACCTTCCAAAATAAATCTTTTTATTCTTATAAAGGTGATTTCTAGCTGCAATTAGTGACCAAAAGGCTATATTTGTTAAGGCAAAACTAATCTTTATGTGTCACCCTTTATACTTTGTGAATTTGACTTAAAGATATGTTGTGTCACCCTTTATACTTTGTGAATTTGACTTAAAGATATGTTGAAGTATGATAGCTGATGTGATTTCAATTCTTGTTTTTAACAGCTGGCTATGTAGACCTTCCTGATATATTCAAAACGGGTTTTATTATGGCATTTATTAATGCTGTCATCTGGGGAGGTGTTGGCTCTATCTGGTGGAAATTTTTAGGCTTGTATTAA

Protein sequence

>MS.gene071900.t1

MESFALHSLSTTSSPTFFLHHHHHRSSRPIFRSQFSLPQNPSSRSIPSLKSSQSFSFPSKVSTFNLFSKPHFPIHANSTPPPSQSPPSKPNILQGAKPIPFVISILIGLIVRFFVPKPVEVTPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTSVVTKTLTFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPNSPSSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCVKLAQELGVVISNPWVTWFKAASLPAFVCLLATPLILYTIYPPEIKDTPEAPALAAKKLETMGPVTQNEWVMVATMLLAVSLWIFGETLGIASAVAAMLGLSILLVLGVLDWDDCLNEKSAWDTLAWFAILVGMASQLTNLGIVSWMSDCVANSLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGTLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKTGFIMAFINAVIWGGVGSIWWKFLGLY