AlfalfaGEDB | MS.gene061098

M. sativa cultivar XinJiangDaYe / MS.gene061098

KEGG: K12836
GO: GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0046872 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363
PFAM: PF00642.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061098.t1	XP_024634157.1	100	279	0	0	1	279	1	279	1.10E-117	433

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061098.t1	Q9FMY5	84.0	281	41	1	1	277	1	281	3.6e-93	342.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061098.t1	G7IA30	100.0	279	0	0	1	279	1	279	7.9e-118	433.0

TFs/TRs:

Gene ID	Type	Classification
MS.gene061098.t1	TF	C3H

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene061098	MS.gene06988	PPI
MS.gene061098	MS.gene20758	PPI
MS.gene061098	MS.gene70370	PPI
MS.gene061098	MS.gene88797	PPI
MS.gene061098	MS.gene07236	PPI
MS.gene061098	MS.gene36138	PPI
MS.gene43805	MS.gene061098	PPI
MS.gene061098	MS.gene025726	PPI
MS.gene061098	MS.gene005567	PPI
MS.gene061098	MS.gene028438	PPI
MS.gene44906	MS.gene061098	PPI
MS.gene35022	MS.gene061098	PPI
MS.gene061098	MS.gene22969	PPI
MS.gene061098	MS.gene025725	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061098.t1	MTR_1g035130	100.000	279	0	0	1	279	1	279	0.0	566
MS.gene061098.t1	MTR_2g084715	66.783	286	86	2	1	278	1	285	3.30e-126	362
MS.gene061098.t1	MTR_7g103630	60.656	305	82	5	1	276	1	296	2.29e-118	342
MS.gene061098.t1	MTR_2g005450	40.719	167	94	2	9	172	184	348	2.12e-38	143

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061098.t1	AT5G42820	73.944	284	64	2	1	277	1	281	6.78e-138	390
MS.gene061098.t1	AT5G42820	73.944	284	64	2	1	277	1	281	6.78e-138	390
MS.gene061098.t1	AT1G27650	68.041	291	68	4	1	272	1	285	6.91e-125	358
MS.gene061098.t1	AT1G27650	61.411	241	68	4	51	272	1	235	4.88e-83	249
MS.gene061098.t1	AT1G10320	38.922	167	97	2	9	172	228	392	1.09e-37	141
MS.gene061098.t1	AT1G10320	38.922	167	97	2	9	172	237	401	1.34e-37	141
MS.gene061098.t1	AT3G44785	81.481	54	10	0	1	54	1	54	3.08e-28	103

Find 86 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTTTCAACGTAACCGAATT+TGG	0.093127	1.4:+19254378	None:intergenic
AGGGATGGTGGGAGGAGAAA+TGG	0.261636	1.4:-19253908	MS.gene061098:CDS
GTTGAATGTCTGTGATAATT+TGG	0.270895	1.4:-19254356	MS.gene061098:CDS
GGAAAAGAGATAGTAGAGAT+AGG	0.279076	1.4:-19253928	MS.gene061098:CDS
TGTTGGAGAGGAGGAGAGTT+GGG	0.288016	1.4:+19254518	None:intergenic
TTCACCGAGCTTTCCAAATT+CGG	0.322388	1.4:-19254391	MS.gene061098:CDS
ATAGGGTTAGGGATGGAGAT+AGG	0.323264	1.4:-19253961	MS.gene061098:CDS
GAGGAGAGTTGGGGAGATTG+TGG	0.325267	1.4:+19254528	None:intergenic
CTGCTTCTCCTCCTTCTCCT+TGG	0.338251	1.4:+19254052	None:intergenic
GTAGTGATAGGGATAGGGTT+AGG	0.342152	1.4:-19253973	MS.gene061098:CDS
CGAGGATTGAGCAATGGAAT+AGG	0.347688	1.4:-19253850	MS.gene061098:CDS
TTTATGCATGTTAAGAAGAT+TGG	0.350465	1.4:-19254139	MS.gene061098:CDS
TGACCGTTTGGATCGACGCC+GGG	0.392644	1.4:+19254469	None:intergenic
GGGATGGTGGGAGGAGAAAT+GGG	0.394131	1.4:-19253907	MS.gene061098:CDS
GGAGAAATGGGAGGGAGGCA+AGG	0.399845	1.4:-19253895	MS.gene061098:CDS
AGAAGATTGGTAGGGAGTTG+AGG	0.400429	1.4:-19254126	MS.gene061098:CDS
GGGAGATTGTGGGACGGTTG+TGG	0.404937	1.4:+19254539	None:intergenic
AGGAGAGTTGGGGAGATTGT+GGG	0.405421	1.4:+19254529	None:intergenic
GAGAAATGGGAGGGAGGCAA+GGG	0.407109	1.4:-19253894	MS.gene061098:CDS
GCCTCACGAAAATCCGTAAC+AGG	0.411096	1.4:+19254214	None:intergenic
AGAAATCTTCGAAGTGTTGT+TGG	0.412558	1.4:+19254425	None:intergenic
GATAGTAGAGATAGGGATGG+TGG	0.414030	1.4:-19253920	MS.gene061098:CDS
GTGGAAGACGAAGTAGTGAT+AGG	0.416019	1.4:-19253985	MS.gene061098:CDS
GGATCGATTGGTTGACCGTT+TGG	0.421209	1.4:+19254457	None:intergenic
CTTCGCAGCGGAGCAGGAGC+CGG	0.428582	1.4:-19254090	MS.gene061098:CDS
GAAAAGAGATAGTAGAGATA+GGG	0.431228	1.4:-19253927	MS.gene061098:CDS
TAGTGATAGGGATAGGGTTA+GGG	0.437566	1.4:-19253972	MS.gene061098:CDS
AGCGGAGCAGGAGCCGGAGC+AGG	0.446956	1.4:-19254084	MS.gene061098:CDS
ATGTTGGAGAGGAGGAGAGT+TGG	0.454313	1.4:+19254517	None:intergenic
TGGGAGGAGAAATGGGAGGG+AGG	0.457003	1.4:-19253900	MS.gene061098:CDS
AATTTGGCTGATCATATGAT+TGG	0.466245	1.4:-19254340	MS.gene061098:CDS
GAGGATTGAGCAATGGAATA+GGG	0.468964	1.4:-19253849	MS.gene061098:CDS
GACGAAGTAGTGATAGGGAT+AGG	0.484651	1.4:-19253979	MS.gene061098:CDS
AATGGGAGGGAGGCAAGGGA+AGG	0.490864	1.4:-19253890	MS.gene061098:CDS
GCGCCGATCTTGAAGTAGAA+AGG	0.491890	1.4:+19254592	None:intergenic
TTAGGGATGGAGATAGGGAT+AGG	0.502553	1.4:-19253955	MS.gene061098:CDS
ATAGTAGAGATAGGGATGGT+GGG	0.504180	1.4:-19253919	MS.gene061098:CDS
TGGATCTGACGCGGATCGAT+TGG	0.504819	1.4:+19254445	None:intergenic
ACGAAGTAGTGATAGGGATA+GGG	0.505580	1.4:-19253978	MS.gene061098:CDS
CGCCGATCTTGAAGTAGAAA+GGG	0.506625	1.4:+19254593	None:intergenic
TTGGACTATTACTCCTGCTC+CGG	0.509383	1.4:+19254071	None:intergenic
TAGGGTTAGGGATGGAGATA+GGG	0.510727	1.4:-19253960	MS.gene061098:CDS
GGAGGCAAGGGAAGGAAGCG+AGG	0.519892	1.4:-19253882	MS.gene061098:CDS
TGCCCTTTCTACTTCAAGAT+CGG	0.519944	1.4:-19254595	MS.gene061098:CDS
GTTGGAGAGGAGGAGAGTTG+GGG	0.525720	1.4:+19254519	None:intergenic
GGCGACTTGTCGGCAGTATG+AGG	0.530954	1.4:-19254194	MS.gene061098:CDS
CAAGGGAAGGAAGCGAGGAA+AGG	0.534933	1.4:-19253877	MS.gene061098:CDS
GCGGCGTTAGCGAGTTTGAG+AGG	0.538412	1.4:-19254277	MS.gene061098:CDS
ATGGTGGGAGGAGAAATGGG+AGG	0.544340	1.4:-19253904	MS.gene061098:CDS
TGCATGTTAAGAAGATTGGT+AGG	0.545724	1.4:-19254135	MS.gene061098:CDS
GAACACTTAGCATCAATCTT+CGG	0.547030	1.4:-19254640	MS.gene061098:CDS
ATGGAGATAGGGATAGGGAG+AGG	0.548603	1.4:-19253949	MS.gene061098:CDS
TAGGGATGGAGATAGGGATA+GGG	0.557714	1.4:-19253954	MS.gene061098:CDS
AAGATCGGCGCGTGTCGTCA+CGG	0.559187	1.4:-19254580	MS.gene061098:CDS
GATAGGGATAGGGTTAGGGA+TGG	0.561282	1.4:-19253968	MS.gene061098:CDS
AGAGATAGTAGAGATAGGGA+TGG	0.563563	1.4:-19253923	MS.gene061098:CDS
TTGACCGTTTGGATCGACGC+CGG	0.564773	1.4:+19254468	None:intergenic
TGGAAGACGAAGTAGTGATA+GGG	0.570881	1.4:-19253984	MS.gene061098:CDS
AGATTGGTAGGGAGTTGAGG+AGG	0.577482	1.4:-19254123	MS.gene061098:CDS
CGTTAGCGAGTTTGAGAGGG+AGG	0.578892	1.4:-19254273	MS.gene061098:CDS
GTAATAGTCCAAGGAGAAGG+AGG	0.580050	1.4:-19254060	MS.gene061098:CDS
CGGCGTTAGCGAGTTTGAGA+GGG	0.582628	1.4:-19254276	MS.gene061098:CDS
GGAGTAATAGTCCAAGGAGA+AGG	0.586898	1.4:-19254063	MS.gene061098:CDS
GAAGCGAGGAAAGGCGAGCG+AGG	0.588613	1.4:-19253868	MS.gene061098:CDS
GCATGTTAAGAAGATTGGTA+GGG	0.590056	1.4:-19254134	MS.gene061098:CDS
GGCGAGCGAGGATTGAGCAA+TGG	0.594879	1.4:-19253856	MS.gene061098:CDS
GACCGTTTGGATCGACGCCG+GGG	0.598231	1.4:+19254470	None:intergenic
GGAGCAGGAGTAATAGTCCA+AGG	0.602657	1.4:-19254069	MS.gene061098:CDS
TGGTGGGAGGAGAAATGGGA+GGG	0.612785	1.4:-19253903	MS.gene061098:CDS
GTAACCGAATTTGGAAAGCT+CGG	0.618971	1.4:+19254387	None:intergenic
CGTCCCGACATCATCACCCC+CGG	0.623033	1.4:-19254487	MS.gene061098:CDS
GACGTTGGTACATGTTGGAG+AGG	0.624648	1.4:+19254506	None:intergenic
GAGGAGAATAGCTGTAATCG+TGG	0.625598	1.4:-19254175	MS.gene061098:CDS
ACCGTTTGGATCGACGCCGG+GGG	0.637319	1.4:+19254471	None:intergenic
GTAGAGATAGGGATGGTGGG+AGG	0.637505	1.4:-19253916	MS.gene061098:CDS
GTTGGTACATGTTGGAGAGG+AGG	0.641509	1.4:+19254509	None:intergenic
GTCGGGACGTTGGTACATGT+TGG	0.644753	1.4:+19254501	None:intergenic
AGAGGAAGATCATGCTGCGG+CGG	0.647755	1.4:-19254296	MS.gene061098:CDS
AAGTGTTGTTGGATCTGACG+CGG	0.652115	1.4:+19254436	None:intergenic
GATAGAGATTATGATTCGCG+TGG	0.653513	1.4:-19254004	MS.gene061098:CDS
GGTTGTGGAGACGTGAGCAA+CGG	0.653827	1.4:+19254554	None:intergenic
GGGTGATGATGTCGGGACGT+TGG	0.655152	1.4:+19254491	None:intergenic
GAGTTGGGGAGATTGTGGGA+CGG	0.682417	1.4:+19254533	None:intergenic
TAAAGAGGAAGATCATGCTG+CGG	0.691713	1.4:-19254299	MS.gene061098:CDS
GAGAATAGCTGTAATCGTGG+TGG	0.695229	1.4:-19254172	MS.gene061098:CDS
GAATCATAATCTCTATCACG+CGG	0.759540	1.4:+19254010	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTTATGCATGTTAAGAAGAT+TGG	-	chr1.4:19254336-19254355	MS.gene061098:CDS	25.0%
!!!	TGTTTATGTGCTTTTTAAAG+AGG	-	chr1.4:19254161-19254180	MS.gene061098:CDS	25.0%
	AATTTGGCTGATCATATGAT+TGG	-	chr1.4:19254135-19254154	MS.gene061098:CDS	30.0%
	GAAAAGAGATAGTAGAGATA+GGG	-	chr1.4:19254548-19254567	MS.gene061098:CDS	30.0%
	GTTGAATGTCTGTGATAATT+TGG	-	chr1.4:19254119-19254138	MS.gene061098:CDS	30.0%
	GAACACTTAGCATCAATCTT+CGG	-	chr1.4:19253835-19253854	MS.gene061098:CDS	35.0%
	GAATCATAATCTCTATCACG+CGG	+	chr1.4:19254468-19254487	None:intergenic	35.0%
	GCATGTTAAGAAGATTGGTA+GGG	-	chr1.4:19254341-19254360	MS.gene061098:CDS	35.0%
	GGAAAAGAGATAGTAGAGAT+AGG	-	chr1.4:19254547-19254566	MS.gene061098:CDS	35.0%
	GGAGAAAAATCCGCTAAAAT+CGG	+	chr1.4:19254243-19254262	None:intergenic	35.0%
	TGCATGTTAAGAAGATTGGT+AGG	-	chr1.4:19254340-19254359	MS.gene061098:CDS	35.0%
!!	AGAAATCTTCGAAGTGTTGT+TGG	+	chr1.4:19254053-19254072	None:intergenic	35.0%
	ACGAAGTAGTGATAGGGATA+GGG	-	chr1.4:19254497-19254516	MS.gene061098:CDS	40.0%
	AGAGATAGTAGAGATAGGGA+TGG	-	chr1.4:19254552-19254571	MS.gene061098:CDS	40.0%
	ATAGTAGAGATAGGGATGGT+GGG	-	chr1.4:19254556-19254575	MS.gene061098:CDS	40.0%
	CGTTTCAACGTAACCGAATT+TGG	+	chr1.4:19254100-19254119	None:intergenic	40.0%
	GAGGATTGAGCAATGGAATA+GGG	-	chr1.4:19254626-19254645	MS.gene061098:CDS	40.0%
	GATAGAGATTATGATTCGCG+TGG	-	chr1.4:19254471-19254490	MS.gene061098:CDS	40.0%
	GCAATGGAATAGGGAAAAAG+AGG	-	chr1.4:19254635-19254654	MS.gene061098:CDS	40.0%
	GTAACCGAATTTGGAAAGCT+CGG	+	chr1.4:19254091-19254110	None:intergenic	40.0%
	TAAAGAGGAAGATCATGCTG+CGG	-	chr1.4:19254176-19254195	MS.gene061098:CDS	40.0%
	TAGTGATAGGGATAGGGTTA+GGG	-	chr1.4:19254503-19254522	MS.gene061098:CDS	40.0%
	TGCCCTTTCTACTTCAAGAT+CGG	-	chr1.4:19253880-19253899	MS.gene061098:CDS	40.0%
	TGGAAGACGAAGTAGTGATA+GGG	-	chr1.4:19254491-19254510	MS.gene061098:CDS	40.0%
	TTCACCGAGCTTTCCAAATT+CGG	-	chr1.4:19254084-19254103	MS.gene061098:CDS	40.0%
!	GGAAATTGTTTTCTTCGCAG+CGG	-	chr1.4:19254373-19254392	MS.gene061098:CDS	40.0%
!!	AGCGGATTTTTCTCCTGTTA+CGG	-	chr1.4:19254248-19254267	MS.gene061098:CDS	40.0%
!!	TGAGAGGGAGGTTTTATGAA+GGG	-	chr1.4:19254214-19254233	MS.gene061098:CDS	40.0%
!!	TTGAGAGGGAGGTTTTATGA+AGG	-	chr1.4:19254213-19254232	MS.gene061098:CDS	40.0%
	AGAAGATTGGTAGGGAGTTG+AGG	-	chr1.4:19254349-19254368	MS.gene061098:CDS	45.0%
	ATAGGGTTAGGGATGGAGAT+AGG	-	chr1.4:19254514-19254533	MS.gene061098:CDS	45.0%
	CGAGGATTGAGCAATGGAAT+AGG	-	chr1.4:19254625-19254644	MS.gene061098:CDS	45.0%
	CGCCGATCTTGAAGTAGAAA+GGG	+	chr1.4:19253885-19253904	None:intergenic	45.0%
	GACGAAGTAGTGATAGGGAT+AGG	-	chr1.4:19254496-19254515	MS.gene061098:CDS	45.0%
	GAGAATAGCTGTAATCGTGG+TGG	-	chr1.4:19254303-19254322	MS.gene061098:CDS	45.0%
	GAGGAGAATAGCTGTAATCG+TGG	-	chr1.4:19254300-19254319	MS.gene061098:CDS	45.0%
	GATAGTAGAGATAGGGATGG+TGG	-	chr1.4:19254555-19254574	MS.gene061098:CDS	45.0%
	GGAGTAATAGTCCAAGGAGA+AGG	-	chr1.4:19254412-19254431	MS.gene061098:CDS	45.0%
	GTAATAGTCCAAGGAGAAGG+AGG	-	chr1.4:19254415-19254434	MS.gene061098:CDS	45.0%
	GTAGTGATAGGGATAGGGTT+AGG	-	chr1.4:19254502-19254521	MS.gene061098:CDS	45.0%
	GTGGAAGACGAAGTAGTGAT+AGG	-	chr1.4:19254490-19254509	MS.gene061098:CDS	45.0%
	TAGGGATGGAGATAGGGATA+GGG	-	chr1.4:19254521-19254540	MS.gene061098:CDS	45.0%
	TAGGGTTAGGGATGGAGATA+GGG	-	chr1.4:19254515-19254534	MS.gene061098:CDS	45.0%
	TTAGGGATGGAGATAGGGAT+AGG	-	chr1.4:19254520-19254539	MS.gene061098:CDS	45.0%
	TTGGACTATTACTCCTGCTC+CGG	+	chr1.4:19254407-19254426	None:intergenic	45.0%
!	AAGTGTTGTTGGATCTGACG+CGG	+	chr1.4:19254042-19254061	None:intergenic	45.0%
!	ATTTTCGTGAGGCGACTTGT+CGG	-	chr1.4:19254271-19254290	MS.gene061098:CDS	45.0%
!	TCCTGTTACGGATTTTCGTG+AGG	-	chr1.4:19254260-19254279	MS.gene061098:CDS	45.0%
	AGATTGGTAGGGAGTTGAGG+AGG	-	chr1.4:19254352-19254371	MS.gene061098:CDS	50.0%
	AGGAGAGTTGGGGAGATTGT+GGG	+	chr1.4:19253949-19253968	None:intergenic	50.0%
	ATGGAGATAGGGATAGGGAG+AGG	-	chr1.4:19254526-19254545	MS.gene061098:CDS	50.0%
	ATGTTGGAGAGGAGGAGAGT+TGG	+	chr1.4:19253961-19253980	None:intergenic	50.0%
	GACGTTGGTACATGTTGGAG+AGG	+	chr1.4:19253972-19253991	None:intergenic	50.0%
	GATAGGGATAGGGTTAGGGA+TGG	-	chr1.4:19254507-19254526	MS.gene061098:CDS	50.0%
	GCCTCACGAAAATCCGTAAC+AGG	+	chr1.4:19254264-19254283	None:intergenic	50.0%
	GGAGCAGGAGTAATAGTCCA+AGG	-	chr1.4:19254406-19254425	MS.gene061098:CDS	50.0%
	GTTGGTACATGTTGGAGAGG+AGG	+	chr1.4:19253969-19253988	None:intergenic	50.0%
	TGTTGGAGAGGAGGAGAGTT+GGG	+	chr1.4:19253960-19253979	None:intergenic	50.0%
!	GCGCCGATCTTGAAGTAGAA+AGG	+	chr1.4:19253886-19253905	None:intergenic	50.0%
!	GGATCGATTGGTTGACCGTT+TGG	+	chr1.4:19254021-19254040	None:intergenic	50.0%
!!	GAGGGAGGTTTTATGAAGGG+AGG	-	chr1.4:19254217-19254236	MS.gene061098:CDS	50.0%
!!	TGAAGGGAGGCCGATTTTAG+CGG	-	chr1.4:19254230-19254249	MS.gene061098:CDS	50.0%
	AGAGGAAGATCATGCTGCGG+CGG	-	chr1.4:19254179-19254198	MS.gene061098:CDS	55.0%
	CAAGGGAAGGAAGCGAGGAA+AGG	-	chr1.4:19254598-19254617	MS.gene061098:CDS	55.0%
	CGGCGTTAGCGAGTTTGAGA+GGG	-	chr1.4:19254199-19254218	MS.gene061098:CDS	55.0%
	CGTTAGCGAGTTTGAGAGGG+AGG	-	chr1.4:19254202-19254221	MS.gene061098:CDS	55.0%
	CTGCTTCTCCTCCTTCTCCT+TGG	+	chr1.4:19254426-19254445	None:intergenic	55.0%
	GAGAAATGGGAGGGAGGCAA+GGG	-	chr1.4:19254581-19254600	MS.gene061098:CDS	55.0%
	GAGGAGAGTTGGGGAGATTG+TGG	+	chr1.4:19253950-19253969	None:intergenic	55.0%
	GAGTTGGGGAGATTGTGGGA+CGG	+	chr1.4:19253945-19253964	None:intergenic	55.0%
	GGTTGTGGAGACGTGAGCAA+CGG	+	chr1.4:19253924-19253943	None:intergenic	55.0%
	GTCGGGACGTTGGTACATGT+TGG	+	chr1.4:19253977-19253996	None:intergenic	55.0%
	GTTGGAGAGGAGGAGAGTTG+GGG	+	chr1.4:19253959-19253978	None:intergenic	55.0%
	TGGATCTGACGCGGATCGAT+TGG	+	chr1.4:19254033-19254052	None:intergenic	55.0%
	TGGTGGGAGGAGAAATGGGA+GGG	-	chr1.4:19254572-19254591	MS.gene061098:CDS	55.0%
	TTGACCGTTTGGATCGACGC+CGG	+	chr1.4:19254010-19254029	None:intergenic	55.0%
!	ATGGTGGGAGGAGAAATGGG+AGG	-	chr1.4:19254571-19254590	MS.gene061098:CDS	55.0%
!	TGTTTTCTTCGCAGCGGAGC+AGG	-	chr1.4:19254379-19254398	MS.gene061098:CDS	55.0%
!!	AGGGATGGTGGGAGGAGAAA+TGG	-	chr1.4:19254567-19254586	MS.gene061098:CDS	55.0%
!!	GGGATGGTGGGAGGAGAAAT+GGG	-	chr1.4:19254568-19254587	MS.gene061098:CDS	55.0%
!!	GTAGAGATAGGGATGGTGGG+AGG	-	chr1.4:19254559-19254578	MS.gene061098:CDS	55.0%
	AAGATCGGCGCGTGTCGTCA+CGG	-	chr1.4:19253895-19253914	MS.gene061098:CDS	60.0%
	AATGGGAGGGAGGCAAGGGA+AGG	-	chr1.4:19254585-19254604	MS.gene061098:CDS	60.0%
	GCGGCGTTAGCGAGTTTGAG+AGG	-	chr1.4:19254198-19254217	MS.gene061098:CDS	60.0%
	GGAGAAATGGGAGGGAGGCA+AGG	-	chr1.4:19254580-19254599	MS.gene061098:CDS	60.0%
	GGCGACTTGTCGGCAGTATG+AGG	-	chr1.4:19254281-19254300	MS.gene061098:CDS	60.0%
	GGCGAGCGAGGATTGAGCAA+TGG	-	chr1.4:19254619-19254638	MS.gene061098:CDS	60.0%
	GGGAGATTGTGGGACGGTTG+TGG	+	chr1.4:19253939-19253958	None:intergenic	60.0%
	TGACCGTTTGGATCGACGCC+GGG	+	chr1.4:19254009-19254028	None:intergenic	60.0%
	TGGGAGGAGAAATGGGAGGG+AGG	-	chr1.4:19254575-19254594	MS.gene061098:CDS	60.0%
!	GGGTGATGATGTCGGGACGT+TGG	+	chr1.4:19253987-19254006	None:intergenic	60.0%
	ACCGTTTGGATCGACGCCGG+GGG	+	chr1.4:19254007-19254026	None:intergenic	65.0%
	CGTCCCGACATCATCACCCC+CGG	-	chr1.4:19253988-19254007	MS.gene061098:CDS	65.0%
	GAAGCGAGGAAAGGCGAGCG+AGG	-	chr1.4:19254607-19254626	MS.gene061098:CDS	65.0%
	GACCGTTTGGATCGACGCCG+GGG	+	chr1.4:19254008-19254027	None:intergenic	65.0%
	GGAGGCAAGGGAAGGAAGCG+AGG	-	chr1.4:19254593-19254612	MS.gene061098:CDS	65.0%
!	ACGCCGGGGGTGATGATGTC+GGG	+	chr1.4:19253994-19254013	None:intergenic	65.0%
!	GACGCCGGGGGTGATGATGT+CGG	+	chr1.4:19253995-19254014	None:intergenic	65.0%
!!	ACCCCCGGCGTCGATCCAAA+CGG	-	chr1.4:19254003-19254022	MS.gene061098:CDS	65.0%
	CTTCGCAGCGGAGCAGGAGC+CGG	-	chr1.4:19254385-19254404	MS.gene061098:CDS	70.0%
	AGCGGAGCAGGAGCCGGAGC+AGG	-	chr1.4:19254391-19254410	MS.gene061098:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	19253829	19254668	19253829	ID=MS.gene061098
chr1.4	mRNA	19253829	19254668	19253829	ID=MS.gene061098.t1;Parent=MS.gene061098
chr1.4	exon	19253829	19254668	19253829	ID=MS.gene061098.t1.exon1;Parent=MS.gene061098.t1
chr1.4	CDS	19253829	19254668	19253829	ID=cds.MS.gene061098.t1;Parent=MS.gene061098.t1

Gene Sequence

>MS.gene061098

ATGGCGGAACACTTAGCATCAATCTTCGGCACAGAAAAAGACAGAGTAAACTGCCCTTTCTACTTCAAGATCGGCGCGTGTCGTCACGGCGACCGTTGCTCACGTCTCCACAACCGTCCCACAATCTCCCCAACTCTCCTCCTCTCCAACATGTACCAACGTCCCGACATCATCACCCCCGGCGTCGATCCAAACGGTCAACCAATCGATCCGCGTCAGATCCAACAACACTTCGAAGATTTCTACGAAGATATCTTCACCGAGCTTTCCAAATTCGGTTACGTTGAAACGTTGAATGTCTGTGATAATTTGGCTGATCATATGATTGGTAATGTTTATGTGCTTTTTAAAGAGGAAGATCATGCTGCGGCGGCGTTAGCGAGTTTGAGAGGGAGGTTTTATGAAGGGAGGCCGATTTTAGCGGATTTTTCTCCTGTTACGGATTTTCGTGAGGCGACTTGTCGGCAGTATGAGGAGAATAGCTGTAATCGTGGTGGTTATTGTAATTTTATGCATGTTAAGAAGATTGGTAGGGAGTTGAGGAGGAAATTGTTTTCTTCGCAGCGGAGCAGGAGCCGGAGCAGGAGTAATAGTCCAAGGAGAAGGAGGAGAAGCAGAAGCAGAGAACGAGAGAGACCGCGTGATAGAGATTATGATTCGCGTGGAAGACGAAGTAGTGATAGGGATAGGGTTAGGGATGGAGATAGGGATAGGGAGAGGAAAAGAGATAGTAGAGATAGGGATGGTGGGAGGAGAAATGGGAGGGAGGCAAGGGAAGGAAGCGAGGAAAGGCGAGCGAGGATTGAGCAATGGAATAGGGAAAAAGAGGAGAAGCCGTGA

Protein sequence

>MS.gene061098.t1

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITPGVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEEDHAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRELRRKLFSSQRSRSRSRSNSPRRRRRSRSRERERPRDRDYDSRGRRSSDRDRVRDGDRDRERKRDSRDRDGGRRNGREAREGSEERRARIEQWNREKEEKP