AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20758

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20758.t1 MTR_1g088180 94.144 444 26 0 1 444 1 444 0.0 701
MS.gene20758.t1 MTR_8g058530 78.214 280 55 2 1 274 1 280 5.48e-118 347
MS.gene20758.t1 MTR_7g108810 78.292 281 55 2 1 275 102 382 4.13e-116 346
MS.gene20758.t1 MTR_1g083400 64.315 241 82 2 1 238 32 271 1.32e-83 259
MS.gene20758.t1 MTR_7g112760 66.667 195 63 1 1 195 1 193 1.50e-77 243
MS.gene20758.t1 MTR_3g092580 61.500 200 65 1 1 188 108 307 3.20e-74 238
MS.gene20758.t1 MTR_7g112760 54.225 284 91 4 1 284 1 245 4.49e-69 220
MS.gene20758.t1 MTR_2g031870 60.345 116 43 2 294 406 98 213 2.28e-35 132
MS.gene20758.t1 MTR_2g031870 60.345 116 43 2 294 406 124 239 4.13e-35 132
MS.gene20758.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 9.88e-34 129
MS.gene20758.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 1.95e-33 128
MS.gene20758.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 7.60e-33 129
MS.gene20758.t1 MTR_8g092810 50.376 133 54 3 290 410 120 252 9.15e-30 121
MS.gene20758.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 4.77e-14 72.8
MS.gene20758.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 4.77e-14 72.8
MS.gene20758.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 9.50e-14 73.2
MS.gene20758.t1 MTR_8g032130 74.359 39 10 0 371 409 1 39 7.29e-12 62.4
MS.gene20758.t1 MTR_4g097130 33.071 127 75 4 287 406 133 256 2.83e-11 64.7
MS.gene20758.t1 MTR_4g097130 31.250 144 88 5 271 406 111 251 2.87e-11 64.7
MS.gene20758.t1 MTR_4g097130 31.250 144 88 5 271 406 111 251 3.33e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20758.t1 AT1G02840 59.928 277 92 3 1 269 1 266 3.45e-82 254
MS.gene20758.t1 AT1G02840 59.928 277 92 3 1 269 1 266 3.45e-82 254
MS.gene20758.t1 AT1G02840 59.928 277 92 3 1 269 1 266 3.45e-82 254
MS.gene20758.t1 AT1G02840 59.928 277 92 3 1 269 1 266 4.92e-82 254
MS.gene20758.t1 AT1G02840 62.598 254 85 2 1 246 1 252 2.25e-81 254
MS.gene20758.t1 AT1G09140 64.103 195 68 1 1 195 1 193 2.33e-76 239
MS.gene20758.t1 AT1G09140 64.103 195 68 1 1 195 1 193 2.85e-76 239
MS.gene20758.t1 AT1G09140 64.103 195 68 1 1 195 1 193 4.76e-76 238
MS.gene20758.t1 AT4G02430 63.317 199 57 3 1 188 1 194 8.15e-73 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 1.05e-72 231
MS.gene20758.t1 AT4G02430 63.317 199 57 3 1 188 1 194 2.23e-72 230
MS.gene20758.t1 AT3G49430 57.789 199 73 1 1 188 1 199 3.13e-72 230
MS.gene20758.t1 AT4G02430 62.921 178 53 2 1 167 1 176 7.76e-65 206
MS.gene20758.t1 AT4G02430 60.920 174 52 3 26 188 24 192 9.53e-58 192
MS.gene20758.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.61e-16 79.0
MS.gene20758.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.61e-16 79.0
MS.gene20758.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.61e-16 79.0
MS.gene20758.t1 AT5G67580 32.812 128 80 4 284 406 114 240 4.04e-11 64.3
MS.gene20758.t1 AT5G67580 32.812 128 80 4 284 406 114 240 4.04e-11 64.3

Find 131 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATTGTCTTGCTCTTTC+TGG 0.066799 1.2:+65943176 None:intergenic
AAGCCAAGATTTACCATCTT+TGG 0.173726 1.2:+65942941 None:intergenic
AAACATTTGTTTATGAAGTA+TGG 0.237511 1.2:-65946982 MS.gene20758:CDS
TCGTGACCCTTCTCATTATA+GGG 0.265643 1.2:-65946461 MS.gene20758:CDS
GTGCAGCTTCGACCCGTAAT+TGG 0.279387 1.2:+65946833 None:intergenic
AGCCAAGATTTACCATCTTT+GGG 0.322088 1.2:+65942942 None:intergenic
TAGATATAGCCTCCATTATA+AGG 0.330489 1.2:+65945801 None:intergenic
AGCTTGACGGCTCTGAGTTC+CGG 0.330618 1.2:-65946552 MS.gene20758:CDS
CTACGGCTCCTGCTCCTACT+TGG 0.345238 1.2:+65946208 None:intergenic
TACCCTTGGGAAATTTGCTT+TGG 0.364511 1.2:+65946377 None:intergenic
GTCGTGACCCTTCTCATTAT+AGG 0.367295 1.2:-65946462 MS.gene20758:CDS
CAGAATGGATAACCTTATAA+TGG 0.373169 1.2:-65945813 MS.gene20758:CDS
TGCATCCTGCCAGGATCTTA+AGG 0.380364 1.2:-65946689 MS.gene20758:CDS
AATGTTTAACTTCTCTTTCA+CGG 0.383899 1.2:+65946998 None:intergenic
CCCAGGTTGTTCATGATGGA+AGG 0.411711 1.2:-65946633 MS.gene20758:CDS
AGCGACTCTTTGAAGTTTGA+CGG 0.414603 1.2:+65945214 None:intergenic
GGCTATATCTAGCTTGAATC+AGG 0.419555 1.2:-65945789 MS.gene20758:CDS
GAACGAGAAACTAATCTTGC+TGG 0.420598 1.2:+65946337 None:intergenic
TGCGGCTGCACCTGCGGCTG+CGG 0.428666 1.2:+65946425 None:intergenic
CGTTGTGAGGATTTACCCTT+GGG 0.434420 1.2:+65946364 None:intergenic
AGTCTAACTCAGACTGTGTA+AGG 0.449162 1.2:+65943096 None:intergenic
AATTTGCTTTGGCTATGTCC+TGG 0.451019 1.2:+65946388 None:intergenic
ATGCCTCTATGAACTGTGAC+AGG 0.451365 1.2:-65943133 MS.gene20758:CDS
TTGAGCAGAACTGTCTATGT+TGG 0.452806 1.2:-65947039 MS.gene20758:CDS
ATCCCAAAGATGGTAAATCT+TGG 0.454228 1.2:-65942944 MS.gene20758:CDS
ATCCTGGCAGGATGCATAAG+AGG 0.455741 1.2:+65946696 None:intergenic
CATAACTCGCATTGATCTAA+AGG 0.464349 1.2:-65946956 MS.gene20758:CDS
TGAGCAGAACTGTCTATGTT+GGG 0.467645 1.2:-65947038 MS.gene20758:CDS
GCGACTCTTTGAAGTTTGAC+GGG 0.468645 1.2:+65945215 None:intergenic
TTGTGGTCTTGATAAAGAAC+AGG 0.470584 1.2:+65946297 None:intergenic
AAGGATCACATGCGAAAAGC+AGG 0.471288 1.2:-65946670 MS.gene20758:CDS
GGCAGCCACATTTGCTGAAG+TGG 0.473979 1.2:-65943036 MS.gene20758:CDS
AACAATGGCCAGGGTGGTCG+AGG 0.475550 1.2:-65946763 MS.gene20758:CDS
GAATATCGTGTCCTAGTCAA+TGG 0.486962 1.2:-65946724 MS.gene20758:CDS
GCCCTCTTATGCATCCTGCC+AGG 0.488281 1.2:-65946698 MS.gene20758:CDS
CATGATGGAAGGGCTACTAC+TGG 0.489348 1.2:-65946622 MS.gene20758:CDS
CTTCTGCAGCTTCCTCTATG+AGG 0.491892 1.2:+65943009 None:intergenic
GCATGTGATCCTTAAGATCC+TGG 0.492160 1.2:+65946680 None:intergenic
GAAGATATAGCCGCAGCCGC+AGG 0.494953 1.2:-65946435 MS.gene20758:CDS
CTTTATCAAGACCACAATCA+AGG 0.498752 1.2:-65946291 MS.gene20758:CDS
CGCAGCCGTAGCTACAGTCC+AGG 0.500875 1.2:-65946406 MS.gene20758:CDS
CTGAAGTCTCTCACATCTAG+TGG 0.502259 1.2:-65945181 MS.gene20758:CDS
TACGGCTGCGGCTGCACCTG+CGG 0.503939 1.2:+65946419 None:intergenic
CAAGACCACAATCAAGGCCT+AGG 0.505060 1.2:-65946285 MS.gene20758:CDS
GAAGCTTATGTAGAAGCTGC+AGG 0.505128 1.2:-65942990 MS.gene20758:CDS
TAAAGAACAGGATCTAGATC+TGG 0.509339 1.2:+65946309 None:intergenic
CCCTTCCATCATGAACAACC+TGG 0.514903 1.2:+65946632 None:intergenic
AGGCGGGACTCTAGAAGTCT+TGG 0.515579 1.2:-65946484 MS.gene20758:CDS
TTCTGCCTCCCTTCCAACAC+GGG 0.517994 1.2:+65943155 None:intergenic
TTCTGCAGCTTCCTCTATGA+GGG 0.519176 1.2:+65943010 None:intergenic
CAGGTCTTACGTTCGTGTGA+GGG 0.523597 1.2:-65946518 MS.gene20758:CDS
ATCTAGTGGAAAACTGATCA+AGG 0.524604 1.2:-65945167 MS.gene20758:intron
TCTCTTTCACGGATATCGCC+AGG 0.525115 1.2:+65947009 None:intergenic
CAGTATTCACAACAATGGCC+AGG 0.526282 1.2:-65946773 MS.gene20758:CDS
GGCTTCCACTTCAGCAAATG+TGG 0.527029 1.2:+65943031 None:intergenic
CCAGGTCTTACGTTCGTGTG+AGG 0.529487 1.2:-65946519 MS.gene20758:CDS
AGCAAGACAATCACCCGTGT+TGG 0.529523 1.2:-65943168 MS.gene20758:CDS
GCAGGAGTCCAAGTAGGAGC+AGG 0.530125 1.2:-65946216 MS.gene20758:CDS
GTCTATGTTGGGAATCTACC+TGG 0.530479 1.2:-65947027 MS.gene20758:CDS
AGCTGTAGTATTACAAAGGA+AGG 0.530942 1.2:+65942916 None:intergenic
GACACGATATTCAGAGTGAC+TGG 0.532664 1.2:+65946735 None:intergenic
AAGGGCTACTACTGGGATTG+TGG 0.536560 1.2:-65946614 MS.gene20758:CDS
CCAGGTTGTTCATGATGGAA+GGG 0.536752 1.2:-65946632 MS.gene20758:CDS
AGACAATCACCCGTGTTGGA+AGG 0.540537 1.2:-65943164 MS.gene20758:CDS
TGCTCTTTCTGGATATGCTG+AGG 0.541893 1.2:+65943187 None:intergenic
GACAATCACCCGTGTTGGAA+GGG 0.544342 1.2:-65943163 MS.gene20758:CDS
GCCGTAGCAAGAGTTTGTCC+AGG 0.544644 1.2:-65946192 MS.gene20758:intron
CTTTCTGGATATGCTGAGGT+AGG 0.546286 1.2:+65943191 None:intergenic
CTTCTTCCCCTATAATGAGA+AGG 0.548764 1.2:+65946454 None:intergenic
ACCTGGACAAACTCTTGCTA+CGG 0.549295 1.2:+65946191 None:intergenic
AAGGATTGCTAATTTCATAG+AGG 0.551226 1.2:-65945747 MS.gene20758:intron
TTCTTCCCCTATAATGAGAA+GGG 0.552088 1.2:+65946455 None:intergenic
GTGATCCTTAAGATCCTGGC+AGG 0.553887 1.2:+65946684 None:intergenic
GGCTGCCTCTTGTGCAGACA+CGG 0.556041 1.2:+65943052 None:intergenic
ACGTTGTGAGGATTTACCCT+TGG 0.556462 1.2:+65946363 None:intergenic
GTGCTAGCAGGAGTCCAAGT+AGG 0.558874 1.2:-65946222 MS.gene20758:CDS
GGGAGAAACAATCCCAAAGA+TGG 0.562021 1.2:-65942954 MS.gene20758:CDS
AATGCTGACGATGCAATTTG+TGG 0.562206 1.2:-65946883 MS.gene20758:CDS
ATTCTGCCTCCCTTCCAACA+CGG 0.567843 1.2:+65943154 None:intergenic
AGCTGCAGGGGAAAGACTGA+AGG 0.570597 1.2:-65942976 MS.gene20758:CDS
AACACTACAAATGCATAGCA+AGG 0.573032 1.2:+65946919 None:intergenic
GTTAGACTTTCAATTAGCAA+TGG 0.573973 1.2:-65943081 MS.gene20758:CDS
AGGATCACATGCGAAAAGCA+GGG 0.574593 1.2:-65946669 MS.gene20758:CDS
AATGTCCGTGTCTGCACAAG+AGG 0.580785 1.2:-65943057 MS.gene20758:CDS
CTGGACTGTAGCTACGGCTG+CGG 0.581379 1.2:+65946407 None:intergenic
TATATCTAGCTTGAATCAGG+TGG 0.583989 1.2:-65945786 MS.gene20758:CDS
CGCAGAGGTAATGGAGACCT+AGG 0.588079 1.2:+65946268 None:intergenic
ATGATGGAAGGGCTACTACT+GGG 0.595339 1.2:-65946621 MS.gene20758:CDS
GATGCAATTTGTGGGTGTGA+TGG 0.595466 1.2:-65946874 MS.gene20758:CDS
ATCCCTGTCACAGTTCATAG+AGG 0.596019 1.2:+65943130 None:intergenic
TGAAGTTTGACGGGGACCCG+TGG 0.597796 1.2:+65945224 None:intergenic
CCTCACACGAACGTAAGACC+TGG 0.598258 1.2:+65946519 None:intergenic
GTGTGAGGGAATATGATTCG+AGG 0.600035 1.2:-65946504 MS.gene20758:CDS
ATGCTGACGATGCAATTTGT+GGG 0.600261 1.2:-65946882 MS.gene20758:CDS
ACACTACAAATGCATAGCAA+GGG 0.601578 1.2:+65946920 None:intergenic
GTATTCTGTAGGACCACCAC+GGG 0.603546 1.2:-65945240 MS.gene20758:intron
TCTTGCTGGTGAACGTTGTG+AGG 0.603550 1.2:+65946351 None:intergenic
GCTGCAGGGGAAAGACTGAA+GGG 0.603589 1.2:-65942975 MS.gene20758:CDS
AATCACCCGTGTTGGAAGGG+AGG 0.604837 1.2:-65943160 MS.gene20758:CDS
TAGCCAAAGCAAATTTCCCA+AGG 0.606062 1.2:-65946380 MS.gene20758:CDS
CGGGTCGAAGCTGCACATGT+TGG 0.607232 1.2:-65946826 MS.gene20758:CDS
AAGAGGGCAGTCCATTGACT+AGG 0.611405 1.2:+65946713 None:intergenic
CACTACAAATGCATAGCAAG+GGG 0.613137 1.2:+65946921 None:intergenic
TCCTGGCAGGATGCATAAGA+GGG 0.613587 1.2:+65946697 None:intergenic
TGGATATTCCTCGACCACCC+TGG 0.613801 1.2:+65946755 None:intergenic
TATGTCCTGGACTGTAGCTA+CGG 0.618293 1.2:+65946401 None:intergenic
AAGCTTATGTAGAAGCTGCA+GGG 0.619909 1.2:-65942989 MS.gene20758:CDS
AGCTTATGTAGAAGCTGCAG+GGG 0.620177 1.2:-65942988 MS.gene20758:CDS
CGTGACCCTTCTCATTATAG+GGG 0.621306 1.2:-65946460 MS.gene20758:CDS
GAGGGAATATGATTCGAGGC+GGG 0.630693 1.2:-65946500 MS.gene20758:CDS
GGAGACCTAGGCCTTGATTG+TGG 0.631250 1.2:+65946280 None:intergenic
ATTAAGCTGTAGTATTACAA+AGG 0.631925 1.2:+65942912 None:intergenic
GGATCACATGCGAAAAGCAG+GGG 0.632074 1.2:-65946668 MS.gene20758:CDS
AATGGATAACCTTATAATGG+AGG 0.633236 1.2:-65945810 MS.gene20758:CDS
CGACTCTTTGAAGTTTGACG+GGG 0.633789 1.2:+65945216 None:intergenic
ATATCTAGCTTGAATCAGGT+GGG 0.639643 1.2:-65945785 MS.gene20758:CDS
AGTTTGACGGGGACCCGTGG+TGG 0.643416 1.2:+65945227 None:intergenic
TGTATTCTGTAGGACCACCA+CGG 0.644372 1.2:-65945241 MS.gene20758:intron
TGAAGTGGAAGCCCTCATAG+AGG 0.645724 1.2:-65943021 MS.gene20758:CDS
CCTTCCATCATGAACAACCT+GGG 0.645797 1.2:+65946633 None:intergenic
CTGCAGGGGAAAGACTGAAG+GGG 0.653890 1.2:-65942974 MS.gene20758:CDS
TGCCTCTATGAACTGTGACA+GGG 0.664675 1.2:-65943132 MS.gene20758:CDS
AGCCAAAGCAAATTTCCCAA+GGG 0.667784 1.2:-65946379 MS.gene20758:CDS
CGATACAGTATTCACAACAA+TGG 0.667801 1.2:-65946778 MS.gene20758:CDS
TTGATCTAAAGGTTCCGCCA+AGG 0.670359 1.2:-65946945 MS.gene20758:CDS
TCTAGCTTGAATCAGGTGGG+TGG 0.677401 1.2:-65945782 MS.gene20758:CDS
TGGGTGGTTCTAATGAAACA+AGG 0.684472 1.2:-65945766 MS.gene20758:CDS
TGAGGGAATATGATTCGAGG+CGG 0.687368 1.2:-65946501 MS.gene20758:CDS
AGTATTCACAACAATGGCCA+GGG 0.697356 1.2:-65946772 MS.gene20758:CDS
ATTCACAACAATGGCCAGGG+TGG 0.724016 1.2:-65946769 MS.gene20758:CDS
ACTACAAATGCATAGCAAGG+GGG 0.768168 1.2:+65946922 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTGTTTAATTATGATT+AGG - chr1.2:65944433-65944452 MS.gene20758:intron 10.0%
!! GAATTTAGTTAGAATAATAA+GGG + chr1.2:65945616-65945635 None:intergenic 15.0%
!! TAATTAAACAAATAACATCA+TGG + chr1.2:65944428-65944447 None:intergenic 15.0%
!! TAATTTCAAAACTTAGTATT+TGG - chr1.2:65943985-65944004 MS.gene20758:intron 15.0%
!! TAGATGTAAAATTACATAAA+AGG + chr1.2:65946036-65946055 None:intergenic 15.0%
!! TTTATTATATAAATGAACTC+TGG + chr1.2:65946008-65946027 None:intergenic 15.0%
!!! ACATGAAAATTGATTTTTTT+AGG + chr1.2:65945927-65945946 None:intergenic 15.0%
!!! GTTTTTGTTCTTTATATTTT+AGG - chr1.2:65946609-65946628 MS.gene20758:CDS 15.0%
!!! TGCTTTTAATTCATTTAATT+CGG - chr1.2:65944290-65944309 MS.gene20758:intron 15.0%
!! AAACATTTGTTTATGAAGTA+TGG - chr1.2:65942995-65943014 MS.gene20758:CDS 20.0%
!! GGAATTTAGTTAGAATAATA+AGG + chr1.2:65945617-65945636 None:intergenic 20.0%
!! TGAATTGACTAAATCTTATT+TGG - chr1.2:65944587-65944606 MS.gene20758:intron 20.0%
!!! ATTGATTTTTTTAGGAACTA+TGG + chr1.2:65945919-65945938 None:intergenic 20.0%
!!! TTGATTTTTTTAGGAACTAT+GGG + chr1.2:65945918-65945937 None:intergenic 20.0%
!!! TTTTTAGATGTCATATTTAC+TGG - chr1.2:65946698-65946717 MS.gene20758:CDS 20.0%
! AAAGCAGAAAAGATAAAAGA+AGG + chr1.2:65944276-65944295 None:intergenic 25.0%
! AAGCAGAAAAGATAAAAGAA+GGG + chr1.2:65944275-65944294 None:intergenic 25.0%
! AATTCATTTAATTCGGTTGT+TGG - chr1.2:65944297-65944316 MS.gene20758:intron 25.0%
! ACAAATAACATCATGGAATA+TGG + chr1.2:65944421-65944440 None:intergenic 25.0%
! AGCTGAATAAAAAAAATCTC+AGG - chr1.2:65946323-65946342 MS.gene20758:CDS 25.0%
! ATGAGAATAGCATTCAAATA+TGG + chr1.2:65946679-65946698 None:intergenic 25.0%
! CATATAAAACAGTATTGTAG+AGG + chr1.2:65945073-65945092 None:intergenic 25.0%
! GAAAAATCAAAGTCTTACAT+TGG - chr1.2:65945144-65945163 MS.gene20758:intron 25.0%
! GAAATGAAAGAGAAGATTAA+GGG + chr1.2:65945647-65945666 None:intergenic 25.0%
! GCTGAATAAAAAAAATCTCA+GGG - chr1.2:65946324-65946343 MS.gene20758:CDS 25.0%
! GTTGATATTAGTACAAATAC+TGG - chr1.2:65944457-65944476 MS.gene20758:intron 25.0%
! TAGAATAATAAGGGTAAAAC+TGG + chr1.2:65945607-65945626 None:intergenic 25.0%
! TCTACTACCATACAAAATTA+AGG + chr1.2:65943961-65943980 None:intergenic 25.0%
! TGAAATGAAAGAGAAGATTA+AGG + chr1.2:65945648-65945667 None:intergenic 25.0%
! TTCGCAAAGAAAGAAAAAAT+GGG + chr1.2:65945803-65945822 None:intergenic 25.0%
!! AATGTTTAACTTCTCTTTCA+CGG + chr1.2:65942982-65943001 None:intergenic 25.0%
!! ATCAAACATTTACTCTAAGA+TGG - chr1.2:65945105-65945124 MS.gene20758:intron 25.0%
!! CTCTACAATACTGTTTTATA+TGG - chr1.2:65945071-65945090 MS.gene20758:intron 25.0%
!! GTAATGGTTTGTGTTTATTT+CGG - chr1.2:65944111-65944130 MS.gene20758:intron 25.0%
!! TAATACCATCTTGTGTTTTT+GGG + chr1.2:65945250-65945269 None:intergenic 25.0%
!! TTATTTCTCATCATTTCAAC+TGG + chr1.2:65946418-65946437 None:intergenic 25.0%
!! TTTCTAGTAATATTTGACGT+TGG - chr1.2:65943867-65943886 MS.gene20758:intron 25.0%
AAAAAACTCAATGCTCACAT+TGG - chr1.2:65945353-65945372 MS.gene20758:intron 30.0%
AACTTAGTTCATGGCTAATT+TGG + chr1.2:65945302-65945321 None:intergenic 30.0%
AAGATGGAGTGAAATAGTAT+TGG - chr1.2:65945121-65945140 MS.gene20758:intron 30.0%
AAGGATTGCTAATTTCATAG+AGG - chr1.2:65944230-65944249 MS.gene20758:intron 30.0%
AAGGCTTGAATAGAACTTAT+AGG - chr1.2:65945384-65945403 MS.gene20758:intron 30.0%
AAGTAGAGCTTATAAATCCT+TGG - chr1.2:65945182-65945201 MS.gene20758:CDS 30.0%
AAGTGTTATAGCATTCCATT+TGG - chr1.2:65944650-65944669 MS.gene20758:intron 30.0%
AATGGATAACCTTATAATGG+AGG - chr1.2:65944167-65944186 MS.gene20758:intron 30.0%
ACACTACTAAACTTAGTTCA+TGG + chr1.2:65945311-65945330 None:intergenic 30.0%
AGATGGAGTGAAATAGTATT+GGG - chr1.2:65945122-65945141 MS.gene20758:intron 30.0%
AGGATTTATAAGCTCTACTT+AGG + chr1.2:65945182-65945201 None:intergenic 30.0%
AGGCTTGAATAGAACTTATA+GGG - chr1.2:65945385-65945404 MS.gene20758:intron 30.0%
AGTCATATAAGGTAATACCA+GGG + chr1.2:65946252-65946271 None:intergenic 30.0%
ATAAAAAAAATCTCAGGGCA+AGG - chr1.2:65946329-65946348 MS.gene20758:CDS 30.0%
CAATTAGAGATCATACTCAT+GGG - chr1.2:65946724-65946743 MS.gene20758:CDS 30.0%
CAGAATGGATAACCTTATAA+TGG - chr1.2:65944164-65944183 MS.gene20758:intron 30.0%
CATTCTGTTTAACGTAAACA+CGG + chr1.2:65944151-65944170 None:intergenic 30.0%
CCATTACAATTTACAGCAAA+AGG + chr1.2:65944098-65944117 None:intergenic 30.0%
GAAAATAATTGGGATTGAGT+GGG + chr1.2:65945733-65945752 None:intergenic 30.0%
GAACTAAGTTTAGTAGTGTT+GGG - chr1.2:65945312-65945331 MS.gene20758:intron 30.0%
GATTGTTACTAGTAAAGATG+TGG - chr1.2:65943816-65943835 MS.gene20758:intron 30.0%
GGATATCCTATTTATAGTAG+AGG - chr1.2:65945005-65945024 MS.gene20758:intron 30.0%
GGTAAACCTCTACTATAAAT+AGG + chr1.2:65945014-65945033 None:intergenic 30.0%
GTAGCATGCTTATTATTACA+AGG + chr1.2:65946442-65946461 None:intergenic 30.0%
GTGTGACACTGAAAATAATT+GGG + chr1.2:65945743-65945762 None:intergenic 30.0%
GTTAGACTTTCAATTAGCAA+TGG - chr1.2:65946896-65946915 MS.gene20758:CDS 30.0%
GTTCGCAAAGAAAGAAAAAA+TGG + chr1.2:65945804-65945823 None:intergenic 30.0%
TAGATATAGCCTCCATTATA+AGG + chr1.2:65944179-65944198 None:intergenic 30.0%
TATGCTATCAAAAAGCTTGA+CGG - chr1.2:65943412-65943431 MS.gene20758:intron 30.0%
TATTGAATGAGATTGAAACG+TGG - chr1.2:65944984-65945003 MS.gene20758:intron 30.0%
TATTGTATGTTTGCATCAGA+TGG + chr1.2:65944864-65944883 None:intergenic 30.0%
TCAATTAGAGATCATACTCA+TGG - chr1.2:65946723-65946742 MS.gene20758:CDS 30.0%
TCTATCCTAGACACATTATT+GGG - chr1.2:65945273-65945292 MS.gene20758:intron 30.0%
TGAAAATAATTGGGATTGAG+TGG + chr1.2:65945734-65945753 None:intergenic 30.0%
TGAACTAAGTTTAGTAGTGT+TGG - chr1.2:65945311-65945330 MS.gene20758:intron 30.0%
TGTGTGACACTGAAAATAAT+TGG + chr1.2:65945744-65945763 None:intergenic 30.0%
TTACAATTTACAGCAAAAGG+AGG + chr1.2:65944095-65944114 None:intergenic 30.0%
TTACCAAATAAACCCAAACA+AGG + chr1.2:65944013-65944032 None:intergenic 30.0%
! CTAATACCATCTTGTGTTTT+TGG + chr1.2:65945251-65945270 None:intergenic 30.0%
! CTTTACATCCCATATCTTTT+GGG - chr1.2:65945037-65945056 MS.gene20758:intron 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG + chr1.2:65946071-65946090 None:intergenic 30.0%
! GTTTATTTGGTAATTGGTAG+TGG - chr1.2:65944020-65944039 MS.gene20758:intron 30.0%
! GTTTGGGTTTATTTGGTAAT+TGG - chr1.2:65944014-65944033 MS.gene20758:intron 30.0%
! TAGTATTTGGTTCCTTGTTT+GGG - chr1.2:65943998-65944017 MS.gene20758:intron 30.0%
! TATTTCAGGTGAAAAAGTAC+AGG - chr1.2:65946757-65946776 MS.gene20758:CDS 30.0%
! TCTTACATTGGCTAGAAATA+AGG - chr1.2:65945156-65945175 MS.gene20758:intron 30.0%
! TCTTTACATCCCATATCTTT+TGG - chr1.2:65945036-65945055 MS.gene20758:intron 30.0%
! TTAGTATTTGGTTCCTTGTT+TGG - chr1.2:65943997-65944016 MS.gene20758:intron 30.0%
! TTTGGCTAATTTGTAGGTTT+GGG + chr1.2:65946229-65946248 None:intergenic 30.0%
!! CCTTTTGCTGTAAATTGTAA+TGG - chr1.2:65944095-65944114 MS.gene20758:intron 30.0%
!! TGATGGACCTTAATTTTGTA+TGG - chr1.2:65943951-65943970 MS.gene20758:intron 30.0%
!! TGGGTTGAGTTTTATATTTC+AGG - chr1.2:65946743-65946762 MS.gene20758:CDS 30.0%
AACACTACAAATGCATAGCA+AGG + chr1.2:65943061-65943080 None:intergenic 35.0%
AAGATATGGGATGTAAAGAC+AGG + chr1.2:65945035-65945054 None:intergenic 35.0%
AAGCCAAGATTTACCATCTT+TGG + chr1.2:65947039-65947058 None:intergenic 35.0%
AAGCTAGAAGCTCATTTATG+TGG + chr1.2:65945424-65945443 None:intergenic 35.0%
AATGCTAGAAGATGATGAAG+AGG + chr1.2:65945869-65945888 None:intergenic 35.0%
ACACTACAAATGCATAGCAA+GGG + chr1.2:65943060-65943079 None:intergenic 35.0%
ACTAGTAAAGATGTGGATGA+TGG - chr1.2:65943823-65943842 MS.gene20758:intron 35.0%
AGCCAAGATTTACCATCTTT+GGG + chr1.2:65947038-65947057 None:intergenic 35.0%
AGTAACAATCAAAGCTTACC+TGG + chr1.2:65943806-65943825 None:intergenic 35.0%
ATCCCAAAGATGGTAAATCT+TGG - chr1.2:65947033-65947052 MS.gene20758:CDS 35.0%
ATCTAGTGGAAAACTGATCA+AGG - chr1.2:65944810-65944829 MS.gene20758:intron 35.0%
CAGTCATATAAGGTAATACC+AGG + chr1.2:65946253-65946272 None:intergenic 35.0%
CGATACAGTATTCACAACAA+TGG - chr1.2:65943199-65943218 MS.gene20758:CDS 35.0%
CGTGTTTACGTTAAACAGAA+TGG - chr1.2:65944149-65944168 MS.gene20758:intron 35.0%
CTCTTTCATTTCACGTTTCT+GGG - chr1.2:65945655-65945674 MS.gene20758:intron 35.0%
CTTTATCAAGACCACAATCA+AGG - chr1.2:65943686-65943705 MS.gene20758:intron 35.0%
GACTGACATACAGTCATATA+AGG + chr1.2:65946263-65946282 None:intergenic 35.0%
GAGAAGATTAAGGGCAAAAA+TGG + chr1.2:65945638-65945657 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr1.2:65946152-65946171 None:intergenic 35.0%
GTCTATCCTAGACACATTAT+TGG - chr1.2:65945272-65945291 MS.gene20758:intron 35.0%
GTTATAGCATTCCATTTGGT+TGG - chr1.2:65944654-65944673 MS.gene20758:intron 35.0%
TAAAGAACAGGATCTAGATC+TGG + chr1.2:65943671-65943690 None:intergenic 35.0%
TAGAACTTATAGGGTCTGTT+TGG - chr1.2:65945394-65945413 MS.gene20758:intron 35.0%
TATAAGGTAATACCAGGGTT+TGG + chr1.2:65946247-65946266 None:intergenic 35.0%
TCTCTTTCATTTCACGTTTC+TGG - chr1.2:65945654-65945673 MS.gene20758:intron 35.0%
TGAAGATTGCCTAGACATTA+TGG + chr1.2:65946174-65946193 None:intergenic 35.0%
TGGCTGAGAAACACTTATTT+GGG - chr1.2:65943887-65943906 MS.gene20758:intron 35.0%
TTAGTTCATGGCTAATTTGG+TGG + chr1.2:65945299-65945318 None:intergenic 35.0%
TTCACCACTTTGTATTCTGT+AGG - chr1.2:65944726-65944745 MS.gene20758:intron 35.0%
TTCAGCTATTACTCCATATC+TGG + chr1.2:65946310-65946329 None:intergenic 35.0%
TTCTTCCCCTATAATGAGAA+GGG + chr1.2:65943525-65943544 None:intergenic 35.0%
TTGGCTGAGAAACACTTATT+TGG - chr1.2:65943886-65943905 MS.gene20758:intron 35.0%
! ATATCTAGCTTGAATCAGGT+GGG - chr1.2:65944192-65944211 MS.gene20758:intron 35.0%
! ATGGTTTGTGTTTATTTCGG+CGG - chr1.2:65944114-65944133 MS.gene20758:intron 35.0%
! CATAACTCGCATTGATCTAA+AGG - chr1.2:65943021-65943040 MS.gene20758:CDS 35.0%
! CTTTTATTACGCAGAGGTAA+TGG + chr1.2:65943721-65943740 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr1.2:65946083-65946102 None:intergenic 35.0%
! GTTCCTTGTTTGGGTTTATT+TGG - chr1.2:65944007-65944026 MS.gene20758:intron 35.0%
! GTTTGGCTAATTTGTAGGTT+TGG + chr1.2:65946230-65946249 None:intergenic 35.0%
! TATATCTAGCTTGAATCAGG+TGG - chr1.2:65944191-65944210 MS.gene20758:intron 35.0%
! TCTATCCTATGGGTTAATGT+AGG - chr1.2:65944953-65944972 MS.gene20758:intron 35.0%
! TGTGATGGCTATGATTTTGA+TGG - chr1.2:65943118-65943137 MS.gene20758:CDS 35.0%
! TTGACAAAAGTAGCTCTGTT+TGG - chr1.2:65945468-65945487 MS.gene20758:intron 35.0%
! TTGGCTAATTTGTAGGTTTG+GGG + chr1.2:65946228-65946247 None:intergenic 35.0%
! TTGTGGTCTTGATAAAGAAC+AGG + chr1.2:65943683-65943702 None:intergenic 35.0%
! TTTTGTCCAATCACTAGTGT+GGG - chr1.2:65944913-65944932 MS.gene20758:intron 35.0%
! TTTTTGTCCAATCACTAGTG+TGG - chr1.2:65944912-65944931 MS.gene20758:intron 35.0%
!! ATCATCTTCTAGCATTGACA+AGG - chr1.2:65945873-65945892 MS.gene20758:intron 35.0%
!! ATTTTGATGGGTGCCAATTA+CGG - chr1.2:65943131-65943150 MS.gene20758:CDS 35.0%
!! GTGATGGCTATGATTTTGAT+GGG - chr1.2:65943119-65943138 MS.gene20758:CDS 35.0%
!! TCATCTTCTAGCATTGACAA+GGG - chr1.2:65945874-65945893 MS.gene20758:intron 35.0%
AAAATCTCAGGGCAAGGATT+TGG - chr1.2:65946335-65946354 MS.gene20758:CDS 40.0%
AACCCACTCCCAAAAGATAT+GGG + chr1.2:65945048-65945067 None:intergenic 40.0%
AAGCTTATGTAGAAGCTGCA+GGG - chr1.2:65946988-65947007 MS.gene20758:CDS 40.0%
AAGGTCCATCAAATTCCTCA+AGG + chr1.2:65943942-65943961 None:intergenic 40.0%
AATAATTGGGATTGAGTGGG+TGG + chr1.2:65945730-65945749 None:intergenic 40.0%
AATGCTGACGATGCAATTTG+TGG - chr1.2:65943094-65943113 MS.gene20758:CDS 40.0%
ACTACAAATGCATAGCAAGG+GGG + chr1.2:65943058-65943077 None:intergenic 40.0%
AGCCAAAGCAAATTTCCCAA+GGG - chr1.2:65943598-65943617 MS.gene20758:intron 40.0%
AGTATTCACAACAATGGCCA+GGG - chr1.2:65943205-65943224 MS.gene20758:CDS 40.0%
AGTCTAACTCAGACTGTGTA+AGG + chr1.2:65946884-65946903 None:intergenic 40.0%
ATGCTGACGATGCAATTTGT+GGG - chr1.2:65943095-65943114 MS.gene20758:CDS 40.0%
CAAACAGAGCCATAATGTCT+AGG - chr1.2:65946162-65946181 MS.gene20758:intron 40.0%
CAAGATGCACTAAGCTTTCA+AGG + chr1.2:65944506-65944525 None:intergenic 40.0%
CACAACTCACTCTATCCTAT+GGG - chr1.2:65944943-65944962 MS.gene20758:intron 40.0%
CACTACAAATGCATAGCAAG+GGG + chr1.2:65943059-65943078 None:intergenic 40.0%
CTATAAGCTCAAACGCTACT+TGG + chr1.2:65945561-65945580 None:intergenic 40.0%
CTTCTTCCCCTATAATGAGA+AGG + chr1.2:65943526-65943545 None:intergenic 40.0%
GAACGAGAAACTAATCTTGC+TGG + chr1.2:65943643-65943662 None:intergenic 40.0%
GAATATCGTGTCCTAGTCAA+TGG - chr1.2:65943253-65943272 MS.gene20758:intron 40.0%
TAGAGACGTATCCAACCAAA+TGG + chr1.2:65944668-65944687 None:intergenic 40.0%
TAGCCAAAGCAAATTTCCCA+AGG - chr1.2:65943597-65943616 MS.gene20758:intron 40.0%
TCACAACTCACTCTATCCTA+TGG - chr1.2:65944942-65944961 MS.gene20758:intron 40.0%
TCGTGACCCTTCTCATTATA+GGG - chr1.2:65943516-65943535 MS.gene20758:intron 40.0%
TCTCATCATTTCAACTGGAC+AGG + chr1.2:65946413-65946432 None:intergenic 40.0%
TGAGCAGAACTGTCTATGTT+GGG - chr1.2:65942939-65942958 MS.gene20758:CDS 40.0%
TGGTCCTACAGAATACAAAG+TGG + chr1.2:65944733-65944752 None:intergenic 40.0%
TGTATGTCAGTCTGAGTTTG+CGG - chr1.2:65946271-65946290 MS.gene20758:CDS 40.0%
TTAGGCCTTGAGGAATTTGA+TGG - chr1.2:65943934-65943953 MS.gene20758:intron 40.0%
TTGAGCAGAACTGTCTATGT+TGG - chr1.2:65942938-65942957 MS.gene20758:CDS 40.0%
! AAGATGTGGATGATGGTTAG+TGG - chr1.2:65943830-65943849 MS.gene20758:intron 40.0%
! AATTTGCTTTGGCTATGTCC+TGG + chr1.2:65943592-65943611 None:intergenic 40.0%
! CTAGACATTATGGCTCTGTT+TGG + chr1.2:65946164-65946183 None:intergenic 40.0%
! GGCTATATCTAGCTTGAATC+AGG - chr1.2:65944188-65944207 MS.gene20758:intron 40.0%
! TACCCTTGGGAAATTTGCTT+TGG + chr1.2:65943603-65943622 None:intergenic 40.0%
! TTTTCCCAGGTTGTTCATGA+TGG - chr1.2:65943340-65943359 MS.gene20758:intron 40.0%
!! AGCGACTCTTTGAAGTTTGA+CGG + chr1.2:65944766-65944785 None:intergenic 40.0%
!! ATCCCATATCTTTTGGGAGT+GGG - chr1.2:65945043-65945062 MS.gene20758:intron 40.0%
!! TGGGTGGTTCTAATGAAACA+AGG - chr1.2:65944211-65944230 MS.gene20758:intron 40.0%
!! TTTTGATGGGTGCCAATTAC+GGG - chr1.2:65943132-65943151 MS.gene20758:CDS 40.0%
AAGGATCACATGCGAAAAGC+AGG - chr1.2:65943307-65943326 MS.gene20758:intron 45.0%
ACCTGGACAAACTCTTGCTA+CGG + chr1.2:65943789-65943808 None:intergenic 45.0%
ACGTTGTGAGGATTTACCCT+TGG + chr1.2:65943617-65943636 None:intergenic 45.0%
AGCTTATGTAGAAGCTGCAG+GGG - chr1.2:65946989-65947008 MS.gene20758:CDS 45.0%
AGGATCACATGCGAAAAGCA+GGG - chr1.2:65943308-65943327 MS.gene20758:intron 45.0%
AGTGGAAATTGGGCCAGATA+TGG - chr1.2:65946294-65946313 MS.gene20758:CDS 45.0%
ATCCCTGTCACAGTTCATAG+AGG + chr1.2:65946850-65946869 None:intergenic 45.0%
ATGCCTCTATGAACTGTGAC+AGG - chr1.2:65946844-65946863 MS.gene20758:CDS 45.0%
CAGTATTCACAACAATGGCC+AGG - chr1.2:65943204-65943223 MS.gene20758:CDS 45.0%
CCAAAGAAGAACGTGTGTGT+TGG - chr1.2:65945957-65945976 MS.gene20758:intron 45.0%
CCAACACACACGTTCTTCTT+TGG + chr1.2:65945960-65945979 None:intergenic 45.0%
CCTACAAATTAGCCAAACCC+TGG - chr1.2:65946232-65946251 MS.gene20758:CDS 45.0%
CCTTCCATCATGAACAACCT+GGG + chr1.2:65943347-65943366 None:intergenic 45.0%
CGTGACCCTTCTCATTATAG+GGG - chr1.2:65943517-65943536 MS.gene20758:intron 45.0%
CGTTGTGAGGATTTACCCTT+GGG + chr1.2:65943616-65943635 None:intergenic 45.0%
CTCCACCAAACCAACTTCTA+AGG + chr1.2:65945217-65945236 None:intergenic 45.0%
CTGAAGTCTCTCACATCTAG+TGG - chr1.2:65944796-65944815 MS.gene20758:intron 45.0%
CTTAGTGCATCTTGAGCCTT+AGG - chr1.2:65944512-65944531 MS.gene20758:intron 45.0%
CTTTCTGGATATGCTGAGGT+AGG + chr1.2:65946789-65946808 None:intergenic 45.0%
GAACCCACTCCCAAAAGATA+TGG + chr1.2:65945049-65945068 None:intergenic 45.0%
GAAGCTTATGTAGAAGCTGC+AGG - chr1.2:65946987-65947006 MS.gene20758:CDS 45.0%
GACACGATATTCAGAGTGAC+TGG + chr1.2:65943245-65943264 None:intergenic 45.0%
GAGTTTGCGGAGTGGAAATT+GGG - chr1.2:65946284-65946303 MS.gene20758:CDS 45.0%
GATGCAATTTGTGGGTGTGA+TGG - chr1.2:65943103-65943122 MS.gene20758:CDS 45.0%
GCAATCCTCACCTTAGAAGT+TGG - chr1.2:65945204-65945223 MS.gene20758:CDS 45.0%
GCATGTGATCCTTAAGATCC+TGG + chr1.2:65943300-65943319 None:intergenic 45.0%
GCTCACATTGGTGTGAGATA+AGG - chr1.2:65945365-65945384 MS.gene20758:intron 45.0%
GGATTTGGAGAGAGACTGAA+AGG - chr1.2:65946350-65946369 MS.gene20758:CDS 45.0%
GGGAGAAACAATCCCAAAGA+TGG - chr1.2:65947023-65947042 MS.gene20758:CDS 45.0%
GGTGATTGTCTTGCTCTTTC+TGG + chr1.2:65946804-65946823 None:intergenic 45.0%
GTCGTGACCCTTCTCATTAT+AGG - chr1.2:65943515-65943534 MS.gene20758:intron 45.0%
GTCTATGTTGGGAATCTACC+TGG - chr1.2:65942950-65942969 MS.gene20758:CDS 45.0%
GTGCTCCTACATTAACCCAT+AGG + chr1.2:65944961-65944980 None:intergenic 45.0%
GTGTGAGGGAATATGATTCG+AGG - chr1.2:65943473-65943492 MS.gene20758:intron 45.0%
TATGTCCTGGACTGTAGCTA+CGG + chr1.2:65943579-65943598 None:intergenic 45.0%
TCAGGCCCAAAAACACAAGA+TGG - chr1.2:65945242-65945261 MS.gene20758:intron 45.0%
TGAGGGAATATGATTCGAGG+CGG - chr1.2:65943476-65943495 MS.gene20758:intron 45.0%
TGAGTTTGCGGAGTGGAAAT+TGG - chr1.2:65946283-65946302 MS.gene20758:CDS 45.0%
TGCCTCTATGAACTGTGACA+GGG - chr1.2:65946845-65946864 MS.gene20758:CDS 45.0%
TGCTCTTTCTGGATATGCTG+AGG + chr1.2:65946793-65946812 None:intergenic 45.0%
TGTATTCTGTAGGACCACCA+CGG - chr1.2:65944736-65944755 MS.gene20758:intron 45.0%
TTCTGCAGCTTCCTCTATGA+GGG + chr1.2:65946970-65946989 None:intergenic 45.0%
TTGATCTAAAGGTTCCGCCA+AGG - chr1.2:65943032-65943051 MS.gene20758:CDS 45.0%
! AGCGACATTTGAAGCACCTA+AGG + chr1.2:65944531-65944550 None:intergenic 45.0%
! ATGATGGAAGGGCTACTACT+GGG - chr1.2:65943356-65943375 MS.gene20758:intron 45.0%
! CCAGGGTTTGGCTAATTTGT+AGG + chr1.2:65946235-65946254 None:intergenic 45.0%
! CCAGGTTGTTCATGATGGAA+GGG - chr1.2:65943345-65943364 MS.gene20758:intron 45.0%
! CCTCACCTTAGAAGTTGGTT+TGG - chr1.2:65945209-65945228 MS.gene20758:CDS 45.0%
! TTGGGGCTTTTATTACGCAG+AGG + chr1.2:65943727-65943746 None:intergenic 45.0%
!! AAGACCTGGAAAAAGCGTTC+CGG + chr1.2:65943447-65943466 None:intergenic 45.0%
!! CACCTTAGAAGTTGGTTTGG+TGG - chr1.2:65945212-65945231 MS.gene20758:CDS 45.0%
!! CATCCCATATCTTTTGGGAG+TGG - chr1.2:65945042-65945061 MS.gene20758:intron 45.0%
!! CCAAACCAACTTCTAAGGTG+AGG + chr1.2:65945212-65945231 None:intergenic 45.0%
!! CGACTCTTTGAAGTTTGACG+GGG + chr1.2:65944764-65944783 None:intergenic 45.0%
!! CTGCTAGCACTGTGCTTTTT+GGG + chr1.2:65943745-65943764 None:intergenic 45.0%
!! GCGACTCTTTGAAGTTTGAC+GGG + chr1.2:65944765-65944784 None:intergenic 45.0%
!! TGCTAGCACTGTGCTTTTTG+GGG + chr1.2:65943744-65943763 None:intergenic 45.0%
!! TGGTTTGGTGGAGTTGAATC+AGG - chr1.2:65945224-65945243 MS.gene20758:CDS 45.0%
!! TGTTGCTTTGATACAGCTGC+TGG - chr1.2:65946486-65946505 MS.gene20758:CDS 45.0%
!! TTCTAAGGTGAGGATTGCCA+AGG + chr1.2:65945202-65945221 None:intergenic 45.0%
!!! GGTGCTTCAAATGTCGCTTT+TGG - chr1.2:65944533-65944552 MS.gene20758:intron 45.0%
AAGGGCTACTACTGGGATTG+TGG - chr1.2:65943363-65943382 MS.gene20758:intron 50.0%
AGACAATCACCCGTGTTGGA+AGG - chr1.2:65946813-65946832 MS.gene20758:CDS 50.0%
AGCAAGACAATCACCCGTGT+TGG - chr1.2:65946809-65946828 MS.gene20758:CDS 50.0%
ATCCTGGCAGGATGCATAAG+AGG + chr1.2:65943284-65943303 None:intergenic 50.0%
ATTCACAACAATGGCCAGGG+TGG - chr1.2:65943208-65943227 MS.gene20758:CDS 50.0%
ATTCTGCCTCCCTTCCAACA+CGG + chr1.2:65946826-65946845 None:intergenic 50.0%
CAAGACCACAATCAAGGCCT+AGG - chr1.2:65943692-65943711 MS.gene20758:intron 50.0%
CAGGTCTTACGTTCGTGTGA+GGG - chr1.2:65943459-65943478 MS.gene20758:intron 50.0%
CCCTTCCATCATGAACAACC+TGG + chr1.2:65943348-65943367 None:intergenic 50.0%
CTTCTGCAGCTTCCTCTATG+AGG + chr1.2:65946971-65946990 None:intergenic 50.0%
GACAATCACCCGTGTTGGAA+GGG - chr1.2:65946814-65946833 MS.gene20758:CDS 50.0%
GAGGGAATATGATTCGAGGC+GGG - chr1.2:65943477-65943496 MS.gene20758:intron 50.0%
GGATCACATGCGAAAAGCAG+GGG - chr1.2:65943309-65943328 MS.gene20758:intron 50.0%
GGCTTCCACTTCAGCAAATG+TGG + chr1.2:65946949-65946968 None:intergenic 50.0%
GGTGGCCCAATAATGTGTCT+AGG + chr1.2:65945281-65945300 None:intergenic 50.0%
GTATTCTGTAGGACCACCAC+GGG - chr1.2:65944737-65944756 MS.gene20758:intron 50.0%
GTGATCCTTAAGATCCTGGC+AGG + chr1.2:65943296-65943315 None:intergenic 50.0%
TCCTGGCAGGATGCATAAGA+GGG + chr1.2:65943283-65943302 None:intergenic 50.0%
TCTCTTTCACGGATATCGCC+AGG + chr1.2:65942971-65942990 None:intergenic 50.0%
TCTTGCTGGTGAACGTTGTG+AGG + chr1.2:65943629-65943648 None:intergenic 50.0%
TGAAGTGGAAGCCCTCATAG+AGG - chr1.2:65946956-65946975 MS.gene20758:CDS 50.0%
TGCATCCTGCCAGGATCTTA+AGG - chr1.2:65943288-65943307 MS.gene20758:intron 50.0%
! AAGAGGGCAGTCCATTGACT+AGG + chr1.2:65943267-65943286 None:intergenic 50.0%
! ACAGCTGCTGGTTGTGAGTT+TGG - chr1.2:65946498-65946517 MS.gene20758:CDS 50.0%
! ACCTTGCAAGTCGCTTTGTG+GGG - chr1.2:65946193-65946212 MS.gene20758:CDS 50.0%
! CACCTTGCAAGTCGCTTTGT+GGG - chr1.2:65946192-65946211 MS.gene20758:intron 50.0%
! CAGCTGCTGGTTGTGAGTTT+GGG - chr1.2:65946499-65946518 MS.gene20758:CDS 50.0%
! CATGATGGAAGGGCTACTAC+TGG - chr1.2:65943355-65943374 MS.gene20758:intron 50.0%
! CCAAAAAGCACAGTGCTAGC+AGG - chr1.2:65943743-65943762 MS.gene20758:intron 50.0%
! CCCAGGTTGTTCATGATGGA+AGG - chr1.2:65943344-65943363 MS.gene20758:intron 50.0%
! CCTGCTAGCACTGTGCTTTT+TGG + chr1.2:65943746-65943765 None:intergenic 50.0%
! TCACCTTGCAAGTCGCTTTG+TGG - chr1.2:65946191-65946210 MS.gene20758:intron 50.0%
! TCTAGCTTGAATCAGGTGGG+TGG - chr1.2:65944195-65944214 MS.gene20758:intron 50.0%
!! AGGGGATGTTTGCTTTTCCC+AGG - chr1.2:65943327-65943346 MS.gene20758:intron 50.0%
!!! AGTTCCGGAACGCTTTTTCC+AGG - chr1.2:65943440-65943459 MS.gene20758:intron 50.0%
AATCACCCGTGTTGGAAGGG+AGG - chr1.2:65946817-65946836 MS.gene20758:CDS 55.0%
AATGCATAGCAAGGGGGCCT+TGG + chr1.2:65943052-65943071 None:intergenic 55.0%
ACCCCACAAAGCGACTTGCA+AGG + chr1.2:65946197-65946216 None:intergenic 55.0%
AGCTGCAGGGGAAAGACTGA+AGG - chr1.2:65947001-65947020 MS.gene20758:CDS 55.0%
CCAGGTCTTACGTTCGTGTG+AGG - chr1.2:65943458-65943477 MS.gene20758:intron 55.0%
CCTCACACGAACGTAAGACC+TGG + chr1.2:65943461-65943480 None:intergenic 55.0%
CGTGCACCCACACTAGTGAT+TGG + chr1.2:65944922-65944941 None:intergenic 55.0%
CTGCAGGGGAAAGACTGAAG+GGG - chr1.2:65947003-65947022 MS.gene20758:CDS 55.0%
CTTCTGCCTCTGGGCATCTT+AGG - chr1.2:65943916-65943935 MS.gene20758:intron 55.0%
GCCGTAGCAAGAGTTTGTCC+AGG - chr1.2:65943785-65943804 MS.gene20758:intron 55.0%
GCTGCAGGGGAAAGACTGAA+GGG - chr1.2:65947002-65947021 MS.gene20758:CDS 55.0%
GGAGACCTAGGCCTTGATTG+TGG + chr1.2:65943700-65943719 None:intergenic 55.0%
GGGTTGAGACTTCTGCCTCT+GGG - chr1.2:65943907-65943926 MS.gene20758:intron 55.0%
GTCAGTCTGAGTTTGCGGAG+TGG - chr1.2:65946276-65946295 MS.gene20758:CDS 55.0%
GTGCAGCTTCGACCCGTAAT+TGG + chr1.2:65943147-65943166 None:intergenic 55.0%
GTGCTAGCAGGAGTCCAAGT+AGG - chr1.2:65943755-65943774 MS.gene20758:intron 55.0%
TCAAGGCCTAAGATGCCCAG+AGG + chr1.2:65943925-65943944 None:intergenic 55.0%
TCTGGGCATCTTAGGCCTTG+AGG - chr1.2:65943924-65943943 MS.gene20758:intron 55.0%
TGGATATTCCTCGACCACCC+TGG + chr1.2:65943225-65943244 None:intergenic 55.0%
TTCTGCCTCCCTTCCAACAC+GGG + chr1.2:65946825-65946844 None:intergenic 55.0%
TTGGGATTGAGTGGGTGGAC+TGG + chr1.2:65945725-65945744 None:intergenic 55.0%
! AGGCGGGACTCTAGAAGTCT+TGG - chr1.2:65943493-65943512 MS.gene20758:intron 55.0%
! GGCAGCCACATTTGCTGAAG+TGG - chr1.2:65946941-65946960 MS.gene20758:CDS 55.0%
! TAGTAGTGTTGGGCGTGAGC+AGG - chr1.2:65945322-65945341 MS.gene20758:intron 55.0%
! TGCAAGTCGCTTTGTGGGGT+CGG - chr1.2:65946197-65946216 MS.gene20758:CDS 55.0%
! TGGGTTGAGACTTCTGCCTC+TGG - chr1.2:65943906-65943925 MS.gene20758:intron 55.0%
!! AGCTTGACGGCTCTGAGTTC+CGG - chr1.2:65943425-65943444 MS.gene20758:intron 55.0%
!! CGCAGAGGTAATGGAGACCT+AGG + chr1.2:65943712-65943731 None:intergenic 55.0%
AACAATGGCCAGGGTGGTCG+AGG - chr1.2:65943214-65943233 MS.gene20758:CDS 60.0%
CGGGTCGAAGCTGCACATGT+TGG - chr1.2:65943151-65943170 MS.gene20758:CDS 60.0%
CTACGGCTCCTGCTCCTACT+TGG + chr1.2:65943772-65943791 None:intergenic 60.0%
CTGGACTGTAGCTACGGCTG+CGG + chr1.2:65943573-65943592 None:intergenic 60.0%
GAAGATATAGCCGCAGCCGC+AGG - chr1.2:65943542-65943561 MS.gene20758:intron 60.0%
GCAGGAGTCCAAGTAGGAGC+AGG - chr1.2:65943761-65943780 MS.gene20758:intron 60.0%
GCCCTCTTATGCATCCTGCC+AGG - chr1.2:65943279-65943298 MS.gene20758:intron 60.0%
TGAAGTTTGACGGGGACCCG+TGG + chr1.2:65944756-65944775 None:intergenic 60.0%
! GCAAGTCGCTTTGTGGGGTC+GGG - chr1.2:65946198-65946217 MS.gene20758:CDS 60.0%
!! GGATTGAGTGGGTGGACTGG+TGG + chr1.2:65945722-65945741 None:intergenic 60.0%
AGTTTGACGGGGACCCGTGG+TGG + chr1.2:65944753-65944772 None:intergenic 65.0%
CGCAGCCGTAGCTACAGTCC+AGG - chr1.2:65943571-65943590 MS.gene20758:intron 65.0%
GCATAGCAAGGGGGCCTTGG+CGG + chr1.2:65943049-65943068 None:intergenic 65.0%
! GTCGCTTTGTGGGGTCGGGT+CGG - chr1.2:65946202-65946221 MS.gene20758:CDS 65.0%
TACGGCTGCGGCTGCACCTG+CGG + chr1.2:65943561-65943580 None:intergenic 70.0%
TGCGGCTGCACCTGCGGCTG+CGG + chr1.2:65943555-65943574 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 65942926 65947073 65942926 ID=MS.gene20758
chr1.2 mRNA 65942926 65947073 65942926 ID=MS.gene20758.t1;Parent=MS.gene20758
chr1.2 exon 65946193 65947073 65946193 ID=MS.gene20758.t1.exon1;Parent=MS.gene20758.t1
chr1.2 CDS 65946193 65947073 65946193 ID=cds.MS.gene20758.t1;Parent=MS.gene20758.t1
chr1.2 exon 65945748 65945832 65945748 ID=MS.gene20758.t1.exon2;Parent=MS.gene20758.t1
chr1.2 CDS 65945748 65945832 65945748 ID=cds.MS.gene20758.t1;Parent=MS.gene20758.t1
chr1.2 exon 65945168 65945251 65945168 ID=MS.gene20758.t1.exon3;Parent=MS.gene20758.t1
chr1.2 CDS 65945168 65945251 65945168 ID=cds.MS.gene20758.t1;Parent=MS.gene20758.t1
chr1.2 exon 65942926 65943234 65942926 ID=MS.gene20758.t1.exon4;Parent=MS.gene20758.t1
chr1.2 CDS 65942926 65943234 65942926 ID=cds.MS.gene20758.t1;Parent=MS.gene20758.t1
Gene Sequence

>MS.gene20758

ATGAGTAGACATTTGAGCAGAACTGTCTATGTTGGGAATCTACCTGGCGATATCCGTGAAAGAGAAGTTAAACATTTGTTTATGAAGTATGGTCACATAACTCGCATTGATCTAAAGGTTCCGCCAAGGCCCCCTTGCTATGCATTTGTAGTGTTTAACGATGCTCTAAATGCTGACGATGCAATTTGTGGGTGTGATGGCTATGATTTTGATGGGTGCCAATTACGGGTCGAAGCTGCACATGTTGGTTATTGTAATTCATCTTCAAGAGATCGATACAGTATTCACAACAATGGCCAGGGTGGTCGAGGAATATCCAGTCACTCTGAATATCGTGTCCTAGTCAATGGACTGCCCTCTTATGCATCCTGCCAGGATCTTAAGGATCACATGCGAAAAGCAGGGGATGTTTGCTTTTCCCAGGTTGTTCATGATGGAAGGGCTACTACTGGGATTGTGGATTACACGAACTGCGATGATATGAAATATGCTATCAAAAAGCTTGACGGCTCTGAGTTCCGGAACGCTTTTTCCAGGTCTTACGTTCGTGTGAGGGAATATGATTCGAGGCGGGACTCTAGAAGTCTTGGTCGTGACCCTTCTCATTATAGGGGAAGAAGATATAGCCGCAGCCGCAGGTGCAGCCGCAGCCGTAGCTACAGTCCAGGACATAGCCAAAGCAAATTTCCCAAGGGTAAATCCTCACAACGTTCACCAGCAAGATTAGTTTCTCGTTCTCGCTCCAGATCTAGATCCTGTTCTTTATCAAGACCACAATCAAGGCCTAGGTCTCCATTACCTCTGCGTAATAAAAGCCCCAAAAAGCACAGTGCTAGCAGGAGTCCAAGTAGGAGCAGGAGCCGTAGCAAGAGTTTGTCCAGGTAAGCTTTGATTGTTACTAGTAAAGATGTGGATGATGGTTAGTGGTTGCTACAAAGTTTTTTCTAGTAATATTTGACGTTGGCTGAGAAACACTTATTTGGGTTGAGACTTCTGCCTCTGGGCATCTTAGGCCTTGAGGAATTTGATGGACCTTAATTTTGTATGGTAGTAGACTGTTAATTTCAAAACTTAGTATTTGGTTCCTTGTTTGGGTTTATTTGGTAATTGGTAGTGGCTTTATTATATTATTATAAATAAAAATGTTTGTCACAAAAAAAGTTGTTCCTCCTTTTGCTGTAAATTGTAATGGTTTGTGTTTATTTCGGCGGTGTATGCTTAACCGTGTTTACGTTAAACAGAATGGATAACCTTATAATGGAGGCTATATCTAGCTTGAATCAGGTGGGTGGTTCTAATGAAACAAGGATTGCTAATTTCATAGAGGTATTATTCTGATTTCTAAGCCCTTCTTTTATCTTTTCTGCTTTTAATTCATTTAATTCGGTTGTTGGCATGCTGTAATTCTGACTTTATGATTGTAGATGTTACAACACATAAAATCATTGTTCTACTTGAACAGTATTTTAGAATATCTTAGAAAATCTCTCGTCCATATTCCATGATGTTATTTGTTTAATTATGATTAGGAGTTGATATTAGTACAAATACTGGTTAGTACTTCGTCTGAGAGCGAGCCTTGAAAGCTTAGTGCATCTTGAGCCTTAGGTGCTTCAAATGTCGCTTTTGGTAAAATGTGATCTATGATGCTATTTCAACTTTGAATTGACTAAATCTTATTTGGTTAAGAAATGACATTATGTTGATTATTAGAATACTAACTTAAGTGTTATAGCATTCCATTTGGTTGGATACGTCTCTATTTTATAAAATTTTGTTTGTGTTAAACATAAGTTGAATTTCACCACTTTGTATTCTGTAGGACCACCACGGGTCCCCGTCAAACTTCAAAGAGTCGCTGTCAGCAAGACTGAAGTCTCTCACATCTAGTGGAAAACTGATCAAGGTAACATGTTTCATTATGTCATAACTATTCCATCTGATGCAAACATACAATAAAAATTGTCATAAATGCATTTGTTTGTATTTTTGTCCAATCACTAGTGTGGGTGCACGTCACAACTCACTCTATCCTATGGGTTAATGTAGGAGCACAAATATTGAATGAGATTGAAACGTGGATATCCTATTTATAGTAGAGGTTTACCTGTCTTTACATCCCATATCTTTTGGGAGTGGGTTCTCCTCTACAATACTGTTTTATATGGACAAATACAAAATCAAACATTTACTCTAAGATGGAGTGAAATAGTATTGGGAAAAATCAAAGTCTTACATTGGCTAGAAATAAGGCCTAAGTAGAGCTTATAAATCCTTGGCAATCCTCACCTTAGAAGTTGGTTTGGTGGAGTTGAATCAGGCCCAAAAACACAAGATGGTATTAGTGTCTATCCTAGACACATTATTGGGCCACCAAATTAGCCATGAACTAAGTTTAGTAGTGTTGGGCGTGAGCAGGTGTATTAGAAAAAACTCAATGCTCACATTGGTGTGAGATAAGGCTTGAATAGAACTTATAGGGTCTGTTTGGTAAGCCACATAAATGAGCTTCTAGCTTCTAGCTTTTAGCTTATAAGCTCGTTTGACAAAAGTAGCTCTGTTTGGTAACACTTTTTTATTATGAGCTTATAGCTTTTTTCATGAGCTTATAAGCTATTTTTCAGAAGCTATTCCAAGTAGCGTTTGAGCTTATAGCTTATAGCTTCTCACTTTTATTTCCAGTTTTACCCTTATTATTCTAACTAAATTCCATTTTTGCCCTTAATCTTCTCTTTCATTTCACGTTTCTGGGTTGCTGTGTTTTTTGTTCATCTTTCATTTCACGCTTACTTTCCACCAGTCCACCCACTCAATCCCAATTATTTTCAGTGTCACACACAACATCAACTTCTTTTTTGATTGCTAGCTTTCTTTCCCATTTTTTCTTTCTTTGCGAACTTTTCAATCAAACTCATTAATGAAACAATACTGAGTTCTTCTCCTCTTCATCATCTTCTAGCATTGACAAGGGTAATACAAATTCAGCTCACCCATAGTTCCTAAAAAAATCAATTTTCATGTTTTATATGCTCCAAAGAAGAACGTGTGTGTTGGCAACACAAACACAGATGAAAATGAACCAGAGTTCATTTATATAATAAAAATGTCCTTTTATGTAATTTTACATCTATCAGCTATTGAACCGCTAATTTTACCAAACACTTCAACTAGCTTATCAGTCATCAGTCATCAGCTAGCATATCAGCTAAAAGCTATCAGCTATCCGCTATTTTTACCAAACAGAGCCATAATGTCTAGGCAATCTTCACCTTGCAAGTCGCTTTGTGGGGTCGGGTCGGCCCCAAACCTACAAATTAGCCAAACCCTGGTATTACCTTATATGACTGTATGTCAGTCTGAGTTTGCGGAGTGGAAATTGGGCCAGATATGGAGTAATAGCTGAATAAAAAAAATCTCAGGGCAAGGATTTGGAGAGAGACTGAAAGGAAAAATGAAAGATGTTGAGTTAAAATGAAAATAGTAACCTGTCCAGTTGAAATGATGAGAAATAATCCTTGTAATAATAAGCATGCTACTTGTTTTACTCTATTATCTGTATTTGTTGCTTTGATACAGCTGCTGGTTGTGAGTTTGGGCTGAGATTCTAGTATATAGTATACAACTCTACATTTTTTAGTGTAGACTTAGAAAAAATTAGTATTTTCTGATGTGAATCAAAAATAGTTTTTGTTCTTTATATTTTAGGAATCAATATTTTTTCTTGATTTAGTGTTGTACATTTATTGTGAGCCATATTTGAATGCTATTCTCATTTTTAGATGTCATATTTACTGGTTTCAATTAGAGATCATACTCATGGGTTGAGTTTTATATTTCAGGTGAAAAAGTACAGGATTGCGCCTACCTCAGCATATCCAGAAAGAGCAAGACAATCACCCGTGTTGGAAGGGAGGCAGAATGCCTCTATGAACTGTGACAGGGATTTGAGCTATAGCCTTACACAGTCTGAGTTAGACTTTCAATTAGCAATGGTAATGTCCGTGTCTGCACAAGAGGCAGCCACATTTGCTGAAGTGGAAGCCCTCATAGAGGAAGCTGCAGAAGCTTATGTAGAAGCTGCAGGGGAAAGACTGAAGGGGAGAAACAATCCCAAAGATGGTAAATCTTGGCTTTTCCTTCCTTTGTAA
Protein sequence

>MS.gene20758.t1

MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFNDALNADDAICGCDGYDFDGCQLRVEAAHVGYCNSSSRDRYSIHNNGQGGRGISSHSEYRVLVNGLPSYASCQDLKDHMRKAGDVCFSQVVHDGRATTGIVDYTNCDDMKYAIKKLDGSEFRNAFSRSYVRVREYDSRRDSRSLGRDPSHYRGRRYSRSRRCSRSRSYSPGHSQSKFPKGKSSQRSPARLVSRSRSRSRSCSLSRPQSRPRSPLPLRNKSPKKHSASRSPSRSRSRSKSLSRMDNLIMEAISSLNQVGGSNETRIANFIEDHHGSPSNFKESLSARLKSLTSSGKLIKVKKYRIAPTSAYPERARQSPVLEGRQNASMNCDRDLSYSLTQSELDFQLAMVMSVSAQEAATFAEVEALIEEAAEAYVEAAGERLKGRNNPKDGKSWLFLPL