AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07236


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07236.t1 MTR_1g088180 94.144 444 26 0 1 444 1 444 0.0 704
MS.gene07236.t1 MTR_8g058530 78.571 280 54 2 1 274 1 280 5.90e-119 350
MS.gene07236.t1 MTR_7g108810 78.648 281 54 2 1 275 102 382 4.32e-117 348
MS.gene07236.t1 MTR_1g083400 64.730 241 81 2 1 238 32 271 8.69e-85 262
MS.gene07236.t1 MTR_7g112760 67.179 195 62 1 1 195 1 193 1.33e-78 246
MS.gene07236.t1 MTR_3g092580 62.000 200 64 1 1 188 108 307 2.67e-75 241
MS.gene07236.t1 MTR_7g112760 54.577 284 90 4 1 284 1 245 3.97e-70 223
MS.gene07236.t1 MTR_2g031870 60.345 116 43 2 294 406 98 213 2.06e-35 132
MS.gene07236.t1 MTR_2g031870 60.345 116 43 2 294 406 124 239 3.92e-35 132
MS.gene07236.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 8.48e-34 129
MS.gene07236.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 1.58e-33 128
MS.gene07236.t1 MTR_8g494240 59.483 116 44 2 294 406 122 237 7.30e-33 129
MS.gene07236.t1 MTR_8g092810 50.376 133 54 3 290 410 120 252 9.61e-30 121
MS.gene07236.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 5.34e-14 72.8
MS.gene07236.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 5.34e-14 72.8
MS.gene07236.t1 MTR_5g015340 37.121 132 76 3 272 399 101 229 1.06e-13 72.8
MS.gene07236.t1 MTR_8g032130 74.359 39 10 0 371 409 1 39 7.29e-12 62.4
MS.gene07236.t1 MTR_4g097130 31.250 144 88 5 271 406 111 251 2.60e-11 64.7
MS.gene07236.t1 MTR_4g097130 31.250 144 88 5 271 406 111 251 2.75e-11 64.7
MS.gene07236.t1 MTR_4g097130 33.071 127 75 4 287 406 133 256 2.99e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07236.t1 AT1G02840 60.289 277 91 3 1 269 1 266 4.12e-83 257
MS.gene07236.t1 AT1G02840 60.289 277 91 3 1 269 1 266 4.12e-83 257
MS.gene07236.t1 AT1G02840 60.289 277 91 3 1 269 1 266 4.12e-83 257
MS.gene07236.t1 AT1G02840 60.289 277 91 3 1 269 1 266 6.20e-83 257
MS.gene07236.t1 AT1G02840 62.992 254 84 2 1 246 1 252 3.80e-82 256
MS.gene07236.t1 AT1G09140 64.615 195 67 1 1 195 1 193 2.02e-77 242
MS.gene07236.t1 AT1G09140 64.615 195 67 1 1 195 1 193 2.64e-77 242
MS.gene07236.t1 AT1G09140 64.615 195 67 1 1 195 1 193 3.47e-77 241
MS.gene07236.t1 AT4G02430 63.819 199 56 3 1 188 1 194 6.24e-74 233
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 9.82e-74 234
MS.gene07236.t1 AT4G02430 63.819 199 56 3 1 188 1 194 2.25e-73 233
MS.gene07236.t1 AT3G49430 58.291 199 72 1 1 188 1 199 3.32e-73 233
MS.gene07236.t1 AT4G02430 63.483 178 52 2 1 167 1 176 6.85e-66 209
MS.gene07236.t1 AT4G02430 61.494 174 51 3 26 188 24 192 7.58e-59 194
MS.gene07236.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.04e-16 79.3
MS.gene07236.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.04e-16 79.3
MS.gene07236.t1 AT1G49950 41.803 122 61 4 294 407 120 239 4.04e-16 79.3
MS.gene07236.t1 AT5G67580 32.812 128 80 4 284 406 114 240 3.45e-11 64.3
MS.gene07236.t1 AT5G67580 32.812 128 80 4 284 406 114 240 3.45e-11 64.3

Find 130 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATTGTCTTGCTCTTTC+TGG 0.066799 1.4:+70010934 None:intergenic
AAGCCAAGATTTACCATCTT+TGG 0.173726 1.4:+70010699 None:intergenic
AAACATTTGTTTATGAAGTA+TGG 0.237511 1.4:-70014780 MS.gene07236:CDS
TCGTGACCCTTCTCATTATA+GGG 0.265643 1.4:-70014259 MS.gene07236:CDS
GTGCAGCTTCGACCCGTAAT+TGG 0.279387 1.4:+70014631 None:intergenic
AGCCAAGATTTACCATCTTT+GGG 0.322088 1.4:+70010700 None:intergenic
TAGATATAGCCTCCATTATA+AGG 0.330489 1.4:+70013599 None:intergenic
AGCTTGACGGCTCTGAGTTC+CGG 0.330618 1.4:-70014350 MS.gene07236:CDS
CTACGGCTCCTGCTCCTACT+TGG 0.345238 1.4:+70014006 None:intergenic
TACCCTTGGGAAATTTGCTT+TGG 0.364511 1.4:+70014175 None:intergenic
GTCGTGACCCTTCTCATTAT+AGG 0.367295 1.4:-70014260 MS.gene07236:CDS
TGCATCCTGCCAGGATCTTA+AGG 0.372928 1.4:-70014487 MS.gene07236:CDS
CAGAATGGATAACCTTATAA+TGG 0.373169 1.4:-70013611 MS.gene07236:CDS
AATGTTTAACTTCTCTTTCA+CGG 0.383899 1.4:+70014796 None:intergenic
CCCAGGTTGTTCATGATGGA+AGG 0.411711 1.4:-70014431 MS.gene07236:CDS
AGCGACTCTTTGAAGTTTGA+CGG 0.414603 1.4:+70012998 None:intergenic
GGCTATATCTAGCTTGAATC+AGG 0.419555 1.4:-70013587 MS.gene07236:CDS
GAACGAGAAACTAATCTTGC+TGG 0.420598 1.4:+70014135 None:intergenic
TGCGGCTGCACCTGCGGCTG+CGG 0.428666 1.4:+70014223 None:intergenic
GCCCTCTTCTGCATCCTGCC+AGG 0.434027 1.4:-70014496 MS.gene07236:CDS
CGTTGTGAGGATTTACCCTT+GGG 0.434420 1.4:+70014162 None:intergenic
GAAGCTTATGTAGCAGCTGC+AGG 0.447550 1.4:-70010748 MS.gene07236:CDS
AGTCTAACTCAGACTGTGTA+AGG 0.449162 1.4:+70010854 None:intergenic
AATTTGCTTTGGCTATGTCC+TGG 0.451019 1.4:+70014186 None:intergenic
ATGCCTCTATGAACTGTGAC+AGG 0.451365 1.4:-70010891 MS.gene07236:CDS
TTGAGCAGAACTGTCTATGT+TGG 0.452806 1.4:-70014837 MS.gene07236:CDS
GAATATCGTGTTCTAGTCAA+TGG 0.452895 1.4:-70014522 MS.gene07236:CDS
ATCCCAAAGATGGTAAATCT+TGG 0.454228 1.4:-70010702 MS.gene07236:CDS
CATAACTCGCATTGATCTAA+AGG 0.464349 1.4:-70014754 MS.gene07236:CDS
TGAGCAGAACTGTCTATGTT+GGG 0.467645 1.4:-70014836 MS.gene07236:CDS
GCGACTCTTTGAAGTTTGAC+GGG 0.468645 1.4:+70012999 None:intergenic
TTGTGGTCTTGATAAAGAAC+AGG 0.470584 1.4:+70014095 None:intergenic
AAGGATCACATGCGAAAAGC+AGG 0.471288 1.4:-70014468 MS.gene07236:CDS
GGCAGCCACATTTGCTGAAG+TGG 0.473979 1.4:-70010794 MS.gene07236:CDS
AACAATGGCCAGGGTGGTCG+AGG 0.475550 1.4:-70014561 MS.gene07236:CDS
CATGATGGAAGGGCTACTAC+TGG 0.489348 1.4:-70014420 MS.gene07236:CDS
CTTCTGCAGCTTCCTCTATG+AGG 0.491892 1.4:+70010767 None:intergenic
GCATGTGATCCTTAAGATCC+TGG 0.492160 1.4:+70014478 None:intergenic
GAAGATATAGCCGCAGCCGC+AGG 0.494953 1.4:-70014233 MS.gene07236:CDS
CTTTATCAAGACCACAATCA+AGG 0.498752 1.4:-70014089 MS.gene07236:CDS
CGCAGCCGTAGCTACAGTCC+AGG 0.500875 1.4:-70014204 MS.gene07236:CDS
CTGAAGTCTCTCACATCTAG+TGG 0.502259 1.4:-70012965 MS.gene07236:CDS
TACGGCTGCGGCTGCACCTG+CGG 0.503939 1.4:+70014217 None:intergenic
CAAGACCACAATCAAGGCCT+AGG 0.505060 1.4:-70014083 MS.gene07236:CDS
TAAAGAACAGGATCTAGATC+TGG 0.509339 1.4:+70014107 None:intergenic
CCCTTCCATCATGAACAACC+TGG 0.514903 1.4:+70014430 None:intergenic
AGGCGGGACTCTAGAAGTCT+TGG 0.515579 1.4:-70014282 MS.gene07236:CDS
TTCTGCCTCCCTTCCAACAC+GGG 0.517994 1.4:+70010913 None:intergenic
TTCTGCAGCTTCCTCTATGA+GGG 0.519176 1.4:+70010768 None:intergenic
CAGGTCTTACGTTCGTGTGA+GGG 0.523597 1.4:-70014316 MS.gene07236:CDS
ATCTAGTGGAAAACTGATCA+AGG 0.524604 1.4:-70012951 MS.gene07236:intron
TCTCTTTCACGGATATCGCC+AGG 0.525115 1.4:+70014807 None:intergenic
CAGTATTCACAACAATGGCC+AGG 0.526282 1.4:-70014571 MS.gene07236:CDS
GGCTTCCACTTCAGCAAATG+TGG 0.527029 1.4:+70010789 None:intergenic
CCAGGTCTTACGTTCGTGTG+AGG 0.529487 1.4:-70014317 MS.gene07236:CDS
AGCAAGACAATCACCCGTGT+TGG 0.529523 1.4:-70010926 MS.gene07236:CDS
GCAGGAGTCCAAGTAGGAGC+AGG 0.530125 1.4:-70014014 MS.gene07236:CDS
GTCTATGTTGGGAATCTACC+TGG 0.530479 1.4:-70014825 MS.gene07236:CDS
AGCTGTAGTATTACAAAGGA+AGG 0.530942 1.4:+70010674 None:intergenic
AACACGATATTCAGAGTGAC+TGG 0.532664 1.4:+70014533 None:intergenic
AAGGGCTACTACTGGGATTG+TGG 0.536560 1.4:-70014412 MS.gene07236:CDS
CCAGGTTGTTCATGATGGAA+GGG 0.536752 1.4:-70014430 MS.gene07236:CDS
AGACAATCACCCGTGTTGGA+AGG 0.540537 1.4:-70010922 MS.gene07236:CDS
TGCTCTTTCTGGATATGCTG+AGG 0.541893 1.4:+70010945 None:intergenic
GACAATCACCCGTGTTGGAA+GGG 0.544342 1.4:-70010921 MS.gene07236:CDS
GCCGTAGCAAGAGTTTGTCC+AGG 0.544644 1.4:-70013990 MS.gene07236:intron
CTTTCTGGATATGCTGAGGT+AGG 0.546286 1.4:+70010949 None:intergenic
CTTCTTCCCCTATAATGAGA+AGG 0.548764 1.4:+70014252 None:intergenic
ACCTGGACAAACTCTTGCTA+CGG 0.549295 1.4:+70013989 None:intergenic
AAGGATTGCTAATTTCATAG+AGG 0.551226 1.4:-70013545 MS.gene07236:intron
TTCTTCCCCTATAATGAGAA+GGG 0.552088 1.4:+70014253 None:intergenic
GTGATCCTTAAGATCCTGGC+AGG 0.553887 1.4:+70014482 None:intergenic
GGCTGCCTCTTGTGCAGACA+CGG 0.556041 1.4:+70010810 None:intergenic
ACGTTGTGAGGATTTACCCT+TGG 0.556462 1.4:+70014161 None:intergenic
GTGCTAGCAGGAGTCCAAGT+AGG 0.558874 1.4:-70014020 MS.gene07236:CDS
GGGAGAAACAATCCCAAAGA+TGG 0.562021 1.4:-70010712 MS.gene07236:CDS
AATGCTGACGATGCAATTTG+TGG 0.562206 1.4:-70014681 MS.gene07236:CDS
ATTCTGCCTCCCTTCCAACA+CGG 0.567843 1.4:+70010912 None:intergenic
AGCTGCAGGGGAAAGACTGA+AGG 0.570597 1.4:-70010734 MS.gene07236:CDS
AACACTACAAATGCATAGCA+AGG 0.573032 1.4:+70014717 None:intergenic
GTTAGACTTTCAATTAGCAA+TGG 0.573973 1.4:-70010839 MS.gene07236:CDS
AGGATCACATGCGAAAAGCA+GGG 0.574593 1.4:-70014467 MS.gene07236:CDS
AATGTCCGTGTCTGCACAAG+AGG 0.580785 1.4:-70010815 MS.gene07236:CDS
CTGGACTGTAGCTACGGCTG+CGG 0.581379 1.4:+70014205 None:intergenic
TATATCTAGCTTGAATCAGG+TGG 0.583989 1.4:-70013584 MS.gene07236:CDS
AAGCTTATGTAGCAGCTGCA+GGG 0.584325 1.4:-70010747 MS.gene07236:CDS
ATCCTGGCAGGATGCAGAAG+AGG 0.584528 1.4:+70014494 None:intergenic
CGCAGAGGTAATGGAGACCT+AGG 0.588079 1.4:+70014066 None:intergenic
AGCTTATGTAGCAGCTGCAG+GGG 0.588273 1.4:-70010746 MS.gene07236:CDS
ATGATGGAAGGGCTACTACT+GGG 0.595339 1.4:-70014419 MS.gene07236:CDS
GATGCAATTTGTGGGTGTGA+TGG 0.595466 1.4:-70014672 MS.gene07236:CDS
ATCCCTGTCACAGTTCATAG+AGG 0.596019 1.4:+70010888 None:intergenic
TGAAGTTTGACGGGGACCCG+TGG 0.597796 1.4:+70013008 None:intergenic
CCTCACACGAACGTAAGACC+TGG 0.598258 1.4:+70014317 None:intergenic
GTGTGAGGGAATATGATTCG+AGG 0.600035 1.4:-70014302 MS.gene07236:CDS
ATGCTGACGATGCAATTTGT+GGG 0.600261 1.4:-70014680 MS.gene07236:CDS
ACACTACAAATGCATAGCAA+GGG 0.601578 1.4:+70014718 None:intergenic
GTATTCTGTAGGACCACCAC+GGG 0.603546 1.4:-70013024 MS.gene07236:intron
TCTTGCTGGTGAACGTTGTG+AGG 0.603550 1.4:+70014149 None:intergenic
TCCTGGCAGGATGCAGAAGA+GGG 0.604747 1.4:+70014495 None:intergenic
AATCACCCGTGTTGGAAGGG+AGG 0.604837 1.4:-70010918 MS.gene07236:CDS
GCTGCAGGGGAAAGACTGAA+GGG 0.605527 1.4:-70010733 MS.gene07236:CDS
TAGCCAAAGCAAATTTCCCA+AGG 0.606062 1.4:-70014178 MS.gene07236:CDS
CGGGTCGAAGCTGCACATGT+TGG 0.607232 1.4:-70014624 MS.gene07236:CDS
CACTACAAATGCATAGCAAG+GGG 0.613137 1.4:+70014719 None:intergenic
TGGATATTCCTCGACCACCC+TGG 0.613801 1.4:+70014553 None:intergenic
TATGTCCTGGACTGTAGCTA+CGG 0.618293 1.4:+70014199 None:intergenic
CGTGACCCTTCTCATTATAG+GGG 0.621306 1.4:-70014258 MS.gene07236:CDS
GAGGGAATATGATTCGAGGC+GGG 0.630693 1.4:-70014298 MS.gene07236:CDS
GGAGACCTAGGCCTTGATTG+TGG 0.631250 1.4:+70014078 None:intergenic
ATTAAGCTGTAGTATTACAA+AGG 0.631925 1.4:+70010670 None:intergenic
GGATCACATGCGAAAAGCAG+GGG 0.632074 1.4:-70014466 MS.gene07236:CDS
AATGGATAACCTTATAATGG+AGG 0.633236 1.4:-70013608 MS.gene07236:CDS
CGACTCTTTGAAGTTTGACG+GGG 0.633789 1.4:+70013000 None:intergenic
ATATCTAGCTTGAATCAGGT+GGG 0.639643 1.4:-70013583 MS.gene07236:CDS
AGTTTGACGGGGACCCGTGG+TGG 0.643416 1.4:+70013011 None:intergenic
TGTATTCTGTAGGACCACCA+CGG 0.644372 1.4:-70013025 MS.gene07236:intron
TGAAGTGGAAGCCCTCATAG+AGG 0.645724 1.4:-70010779 MS.gene07236:CDS
CCTTCCATCATGAACAACCT+GGG 0.645797 1.4:+70014431 None:intergenic
CTGCAGGGGAAAGACTGAAG+GGG 0.663521 1.4:-70010732 MS.gene07236:CDS
TGCCTCTATGAACTGTGACA+GGG 0.664675 1.4:-70010890 MS.gene07236:CDS
AGCCAAAGCAAATTTCCCAA+GGG 0.667784 1.4:-70014177 MS.gene07236:CDS
CGATACAGTATTCACAACAA+TGG 0.667801 1.4:-70014576 MS.gene07236:CDS
TTGATCTAAAGGTTCCGCCA+AGG 0.670359 1.4:-70014743 MS.gene07236:CDS
TCTAGCTTGAATCAGGTGGG+TGG 0.677401 1.4:-70013580 MS.gene07236:CDS
TGGGTGGTTCTAATGAAACA+AGG 0.684472 1.4:-70013564 MS.gene07236:CDS
TGAGGGAATATGATTCGAGG+CGG 0.687368 1.4:-70014299 MS.gene07236:CDS
AGTATTCACAACAATGGCCA+GGG 0.697356 1.4:-70014570 MS.gene07236:CDS
ATTCACAACAATGGCCAGGG+TGG 0.724016 1.4:-70014567 MS.gene07236:CDS
ACTACAAATGCATAGCAAGG+GGG 0.768168 1.4:+70014720 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTGTTTAATTATGATT+AGG - chr1.4:70012205-70012224 MS.gene07236:intron 10.0%
!! GAATTTAGTTAGAATAATAA+GGG + chr1.4:70013388-70013407 None:intergenic 15.0%
!! TAATTAAACAAATAACATCA+TGG + chr1.4:70012200-70012219 None:intergenic 15.0%
!! TAATTTCAAAACTTAGTATT+TGG - chr1.4:70011743-70011762 MS.gene07236:intron 15.0%
!! TAGATGTAAAATTACATAAA+AGG + chr1.4:70013808-70013827 None:intergenic 15.0%
!! TTTATTATATAAATGAACTC+TGG + chr1.4:70013780-70013799 None:intergenic 15.0%
!!! ACATGAAAATTGATTTTTTT+AGG + chr1.4:70013699-70013718 None:intergenic 15.0%
!!! GTTTTTGTTCTTTATATTTT+AGG - chr1.4:70014407-70014426 MS.gene07236:CDS 15.0%
!!! TGCTTTTAATTCATTTAATT+CGG - chr1.4:70012048-70012067 MS.gene07236:intron 15.0%
!! AAACATTTGTTTATGAAGTA+TGG - chr1.4:70010753-70010772 MS.gene07236:CDS 20.0%
!! GGAATTTAGTTAGAATAATA+AGG + chr1.4:70013389-70013408 None:intergenic 20.0%
!! TGAATTGACTAAATCTTATT+TGG - chr1.4:70012359-70012378 MS.gene07236:intron 20.0%
!!! ATTGATTTTTTTAGGAACTA+TGG + chr1.4:70013691-70013710 None:intergenic 20.0%
!!! TTGATTTTTTTAGGAACTAT+GGG + chr1.4:70013690-70013709 None:intergenic 20.0%
!!! TTTTTAGATGTCATATTTAC+TGG - chr1.4:70014496-70014515 MS.gene07236:CDS 20.0%
! AAAGCAGAAAAGATAAAAGA+AGG + chr1.4:70012034-70012053 None:intergenic 25.0%
! AAGCAGAAAAGATAAAAGAA+GGG + chr1.4:70012033-70012052 None:intergenic 25.0%
! AATTCATTTAATTCGGTTGT+TGG - chr1.4:70012055-70012074 MS.gene07236:intron 25.0%
! ACAAATAACATCATGGAATA+TGG + chr1.4:70012193-70012212 None:intergenic 25.0%
! AGCTGAATAAAAAAAATCTC+AGG - chr1.4:70014121-70014140 MS.gene07236:CDS 25.0%
! ATGAGAATAGCATTCAAATA+TGG + chr1.4:70014477-70014496 None:intergenic 25.0%
! CATATAAAACAGTATTGTAG+AGG + chr1.4:70012845-70012864 None:intergenic 25.0%
! GAAAAATCAAAGTCTTACAT+TGG - chr1.4:70012916-70012935 MS.gene07236:intron 25.0%
! GAAATGAAAGAGAAGATTAA+GGG + chr1.4:70013419-70013438 None:intergenic 25.0%
! GCTGAATAAAAAAAATCTCA+GGG - chr1.4:70014122-70014141 MS.gene07236:CDS 25.0%
! GTTGATATTAGTACAAATAC+TGG - chr1.4:70012229-70012248 MS.gene07236:intron 25.0%
! TAGAATAATAAGGGTAAAAC+TGG + chr1.4:70013379-70013398 None:intergenic 25.0%
! TCTACTACCATACAAAATTA+AGG + chr1.4:70011719-70011738 None:intergenic 25.0%
! TGAAATGAAAGAGAAGATTA+AGG + chr1.4:70013420-70013439 None:intergenic 25.0%
! TTCGCAAAGAAAGAAAAAAT+GGG + chr1.4:70013575-70013594 None:intergenic 25.0%
!! AATGTTTAACTTCTCTTTCA+CGG + chr1.4:70010740-70010759 None:intergenic 25.0%
!! ATCAAACATTTACTCTAAGA+TGG - chr1.4:70012877-70012896 MS.gene07236:intron 25.0%
!! CTCTACAATACTGTTTTATA+TGG - chr1.4:70012843-70012862 MS.gene07236:intron 25.0%
!! GTAATGGTTTGTGTTTATTT+CGG - chr1.4:70011869-70011888 MS.gene07236:intron 25.0%
!! TAATACCATCTTGTGTTTTT+GGG + chr1.4:70013022-70013041 None:intergenic 25.0%
!! TTATTTCTCATCATTTCAAC+TGG + chr1.4:70014216-70014235 None:intergenic 25.0%
!! TTTCTAGTAATATTTGACGT+TGG - chr1.4:70011625-70011644 MS.gene07236:intron 25.0%
!!! GATATTCTAAAATACTGTTC+AGG + chr1.4:70012154-70012173 None:intergenic 25.0%
AAAAAACTCAATGCTCACAT+TGG - chr1.4:70013125-70013144 MS.gene07236:intron 30.0%
AACTTAGTTCATGGCTAATT+TGG + chr1.4:70013074-70013093 None:intergenic 30.0%
AAGATGGAGTGAAATAGTAT+TGG - chr1.4:70012893-70012912 MS.gene07236:intron 30.0%
AAGGATTGCTAATTTCATAG+AGG - chr1.4:70011988-70012007 MS.gene07236:intron 30.0%
AAGGCTTGAATAGAACTTAT+AGG - chr1.4:70013156-70013175 MS.gene07236:intron 30.0%
AAGTAGAGCTTATAAATCCT+TGG - chr1.4:70012954-70012973 MS.gene07236:CDS 30.0%
AAGTGTTATAGCATTCCATT+TGG - chr1.4:70012422-70012441 MS.gene07236:intron 30.0%
AATGGATAACCTTATAATGG+AGG - chr1.4:70011925-70011944 MS.gene07236:intron 30.0%
ACACTACTAAACTTAGTTCA+TGG + chr1.4:70013083-70013102 None:intergenic 30.0%
AGATGGAGTGAAATAGTATT+GGG - chr1.4:70012894-70012913 MS.gene07236:intron 30.0%
AGGATTTATAAGCTCTACTT+AGG + chr1.4:70012954-70012973 None:intergenic 30.0%
AGGCTTGAATAGAACTTATA+GGG - chr1.4:70013157-70013176 MS.gene07236:intron 30.0%
AGTCATATAAGGTAATACCA+GGG + chr1.4:70014050-70014069 None:intergenic 30.0%
ATAAAAAAAATCTCAGGGCA+AGG - chr1.4:70014127-70014146 MS.gene07236:CDS 30.0%
CAATTAGAGATCATACTCAT+GGG - chr1.4:70014522-70014541 MS.gene07236:CDS 30.0%
CAGAATGGATAACCTTATAA+TGG - chr1.4:70011922-70011941 MS.gene07236:intron 30.0%
CATTCTGTTTAACGTAAACA+CGG + chr1.4:70011909-70011928 None:intergenic 30.0%
CCATTACAATTTACAGCAAA+AGG + chr1.4:70011856-70011875 None:intergenic 30.0%
GAAAATAATTGGGATTGAGT+GGG + chr1.4:70013505-70013524 None:intergenic 30.0%
GAACTAAGTTTAGTAGTGTT+GGG - chr1.4:70013084-70013103 MS.gene07236:intron 30.0%
GATTGTTACTAGTAAAGATG+TGG - chr1.4:70011574-70011593 MS.gene07236:intron 30.0%
GGATATCCTATTTATAGTAG+AGG - chr1.4:70012777-70012796 MS.gene07236:intron 30.0%
GGTAAACCTCTACTATAAAT+AGG + chr1.4:70012786-70012805 None:intergenic 30.0%
GTAGCATGCTTATTATTACA+AGG + chr1.4:70014240-70014259 None:intergenic 30.0%
GTGTGACACTGAAAATAATT+GGG + chr1.4:70013515-70013534 None:intergenic 30.0%
GTTAGACTTTCAATTAGCAA+TGG - chr1.4:70014694-70014713 MS.gene07236:CDS 30.0%
GTTCGCAAAGAAAGAAAAAA+TGG + chr1.4:70013576-70013595 None:intergenic 30.0%
TAGATATAGCCTCCATTATA+AGG + chr1.4:70011937-70011956 None:intergenic 30.0%
TATGCTATCAAAAAGCTTGA+CGG - chr1.4:70011170-70011189 MS.gene07236:intron 30.0%
TATTGAATGAGATTGAAACG+TGG - chr1.4:70012756-70012775 MS.gene07236:intron 30.0%
TATTGTATGTTTGCATCAGA+TGG + chr1.4:70012636-70012655 None:intergenic 30.0%
TCAATTAGAGATCATACTCA+TGG - chr1.4:70014521-70014540 MS.gene07236:CDS 30.0%
TCTATCCTAGACACATTATT+GGG - chr1.4:70013045-70013064 MS.gene07236:intron 30.0%
TGAAAATAATTGGGATTGAG+TGG + chr1.4:70013506-70013525 None:intergenic 30.0%
TGAACTAAGTTTAGTAGTGT+TGG - chr1.4:70013083-70013102 MS.gene07236:intron 30.0%
TGTGTGACACTGAAAATAAT+TGG + chr1.4:70013516-70013535 None:intergenic 30.0%
TTACAATTTACAGCAAAAGG+AGG + chr1.4:70011853-70011872 None:intergenic 30.0%
TTACCAAATAAACCCAAACA+AGG + chr1.4:70011771-70011790 None:intergenic 30.0%
! CTAATACCATCTTGTGTTTT+TGG + chr1.4:70013023-70013042 None:intergenic 30.0%
! CTTTACATCCCATATCTTTT+GGG - chr1.4:70012809-70012828 MS.gene07236:intron 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG + chr1.4:70013843-70013862 None:intergenic 30.0%
! GTTTATTTGGTAATTGGTAG+TGG - chr1.4:70011778-70011797 MS.gene07236:intron 30.0%
! GTTTGGGTTTATTTGGTAAT+TGG - chr1.4:70011772-70011791 MS.gene07236:intron 30.0%
! TAGTATTTGGTTCCTTGTTT+GGG - chr1.4:70011756-70011775 MS.gene07236:intron 30.0%
! TATTTCAGGTGAAAAAGTAC+AGG - chr1.4:70014555-70014574 MS.gene07236:CDS 30.0%
! TCTTACATTGGCTAGAAATA+AGG - chr1.4:70012928-70012947 MS.gene07236:intron 30.0%
! TCTTTACATCCCATATCTTT+TGG - chr1.4:70012808-70012827 MS.gene07236:intron 30.0%
! TTAGTATTTGGTTCCTTGTT+TGG - chr1.4:70011755-70011774 MS.gene07236:intron 30.0%
! TTTGGCTAATTTGTAGGTTT+GGG + chr1.4:70014027-70014046 None:intergenic 30.0%
!! CCTTTTGCTGTAAATTGTAA+TGG - chr1.4:70011853-70011872 MS.gene07236:intron 30.0%
!! TGATGGACCTTAATTTTGTA+TGG - chr1.4:70011709-70011728 MS.gene07236:intron 30.0%
!! TGGGTTGAGTTTTATATTTC+AGG - chr1.4:70014541-70014560 MS.gene07236:CDS 30.0%
AACACTACAAATGCATAGCA+AGG + chr1.4:70010819-70010838 None:intergenic 35.0%
AAGATATGGGATGTAAAGAC+AGG + chr1.4:70012807-70012826 None:intergenic 35.0%
AAGCCAAGATTTACCATCTT+TGG + chr1.4:70014837-70014856 None:intergenic 35.0%
AAGCTAGAAGCTCATTTATG+TGG + chr1.4:70013196-70013215 None:intergenic 35.0%
AATGCTAGAAGATGATGAAG+AGG + chr1.4:70013641-70013660 None:intergenic 35.0%
ACACTACAAATGCATAGCAA+GGG + chr1.4:70010818-70010837 None:intergenic 35.0%
ACTAGTAAAGATGTGGATGA+TGG - chr1.4:70011581-70011600 MS.gene07236:intron 35.0%
AGCCAAGATTTACCATCTTT+GGG + chr1.4:70014836-70014855 None:intergenic 35.0%
ATCCCAAAGATGGTAAATCT+TGG - chr1.4:70014831-70014850 MS.gene07236:CDS 35.0%
ATCTAGTGGAAAACTGATCA+AGG - chr1.4:70012582-70012601 MS.gene07236:intron 35.0%
CAAGATGCACTAAGATTTCA+AGG + chr1.4:70012278-70012297 None:intergenic 35.0%
CAGTCATATAAGGTAATACC+AGG + chr1.4:70014051-70014070 None:intergenic 35.0%
CGATACAGTATTCACAACAA+TGG - chr1.4:70010957-70010976 MS.gene07236:CDS 35.0%
CGTGTTTACGTTAAACAGAA+TGG - chr1.4:70011907-70011926 MS.gene07236:intron 35.0%
CTCTTTCATTTCACGTTTCT+GGG - chr1.4:70013427-70013446 MS.gene07236:intron 35.0%
CTTTATCAAGACCACAATCA+AGG - chr1.4:70011444-70011463 MS.gene07236:intron 35.0%
GAATATCGTGTTCTAGTCAA+TGG - chr1.4:70011011-70011030 MS.gene07236:intron 35.0%
GACTGACATACAGTCATATA+AGG + chr1.4:70014061-70014080 None:intergenic 35.0%
GAGAAGATTAAGGGCAAAAA+TGG + chr1.4:70013410-70013429 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr1.4:70013950-70013969 None:intergenic 35.0%
GTCTATCCTAGACACATTAT+TGG - chr1.4:70013044-70013063 MS.gene07236:intron 35.0%
GTTATAGCATTCCATTTGGT+TGG - chr1.4:70012426-70012445 MS.gene07236:intron 35.0%
TAAAGAACAGGATCTAGATC+TGG + chr1.4:70011429-70011448 None:intergenic 35.0%
TAGAACTTATAGGGTCTGTT+TGG - chr1.4:70013166-70013185 MS.gene07236:intron 35.0%
TATAAGGTAATACCAGGGTT+TGG + chr1.4:70014045-70014064 None:intergenic 35.0%
TCTCTTTCATTTCACGTTTC+TGG - chr1.4:70013426-70013445 MS.gene07236:intron 35.0%
TGAAGATTGCCTAGACATTA+TGG + chr1.4:70013972-70013991 None:intergenic 35.0%
TGGCTGAGAAACACTTATTT+GGG - chr1.4:70011645-70011664 MS.gene07236:intron 35.0%
TTAGTTCATGGCTAATTTGG+TGG + chr1.4:70013071-70013090 None:intergenic 35.0%
TTATAAGCTCAAACGCTACT+TGG + chr1.4:70013333-70013352 None:intergenic 35.0%
TTCACCACTTTGTATTCTGT+AGG - chr1.4:70012498-70012517 MS.gene07236:intron 35.0%
TTCAGCTATTACTCCATATC+TGG + chr1.4:70014108-70014127 None:intergenic 35.0%
TTCTTCCCCTATAATGAGAA+GGG + chr1.4:70011283-70011302 None:intergenic 35.0%
TTGGCTGAGAAACACTTATT+TGG - chr1.4:70011644-70011663 MS.gene07236:intron 35.0%
! ATATCTAGCTTGAATCAGGT+GGG - chr1.4:70011950-70011969 MS.gene07236:intron 35.0%
! ATGGTTTGTGTTTATTTCGG+CGG - chr1.4:70011872-70011891 MS.gene07236:intron 35.0%
! CATAACTCGCATTGATCTAA+AGG - chr1.4:70010779-70010798 MS.gene07236:CDS 35.0%
! CTTTTATTACGCAGAGGTAA+TGG + chr1.4:70011479-70011498 None:intergenic 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG + chr1.4:70013855-70013874 None:intergenic 35.0%
! GTTCCTTGTTTGGGTTTATT+TGG - chr1.4:70011765-70011784 MS.gene07236:intron 35.0%
! GTTTGGCTAATTTGTAGGTT+TGG + chr1.4:70014028-70014047 None:intergenic 35.0%
! TATATCTAGCTTGAATCAGG+TGG - chr1.4:70011949-70011968 MS.gene07236:intron 35.0%
! TCTATCCTATGGGTTAATGT+AGG - chr1.4:70012725-70012744 MS.gene07236:intron 35.0%
! TGTGATGGCTATGATTTTGA+TGG - chr1.4:70010876-70010895 MS.gene07236:CDS 35.0%
! TTGACAAAAGTAGCTCTGTT+TGG - chr1.4:70013240-70013259 MS.gene07236:intron 35.0%
! TTGGCTAATTTGTAGGTTTG+GGG + chr1.4:70014026-70014045 None:intergenic 35.0%
! TTGTGGTCTTGATAAAGAAC+AGG + chr1.4:70011441-70011460 None:intergenic 35.0%
! TTTTGTCCAATCACTAGTGT+GGG - chr1.4:70012685-70012704 MS.gene07236:intron 35.0%
! TTTTTGTCCAATCACTAGTG+TGG - chr1.4:70012684-70012703 MS.gene07236:intron 35.0%
!! ATCATCTTCTAGCATTGACA+AGG - chr1.4:70013645-70013664 MS.gene07236:intron 35.0%
!! ATTTTGATGGGTGCCAATTA+CGG - chr1.4:70010889-70010908 MS.gene07236:CDS 35.0%
!! GTGATGGCTATGATTTTGAT+GGG - chr1.4:70010877-70010896 MS.gene07236:CDS 35.0%
!! TAGAGAAGTATCCAACCAAA+TGG + chr1.4:70012440-70012459 None:intergenic 35.0%
!! TCATCTTCTAGCATTGACAA+GGG - chr1.4:70013646-70013665 MS.gene07236:intron 35.0%
AAAATCTCAGGGCAAGGATT+TGG - chr1.4:70014133-70014152 MS.gene07236:CDS 40.0%
AACACGATATTCAGAGTGAC+TGG + chr1.4:70011003-70011022 None:intergenic 40.0%
AACCCACTCCCAAAAGATAT+GGG + chr1.4:70012820-70012839 None:intergenic 40.0%
AAGGTCCATCAAATTCCTCA+AGG + chr1.4:70011700-70011719 None:intergenic 40.0%
AATAATTGGGATTGAGTGGG+TGG + chr1.4:70013502-70013521 None:intergenic 40.0%
AATGCTGACGATGCAATTTG+TGG - chr1.4:70010852-70010871 MS.gene07236:CDS 40.0%
ACTACAAATGCATAGCAAGG+GGG + chr1.4:70010816-70010835 None:intergenic 40.0%
AGCCAAAGCAAATTTCCCAA+GGG - chr1.4:70011356-70011375 MS.gene07236:intron 40.0%
AGTAACAATCAGAGCTTACC+TGG + chr1.4:70011564-70011583 None:intergenic 40.0%
AGTATTCACAACAATGGCCA+GGG - chr1.4:70010963-70010982 MS.gene07236:CDS 40.0%
ATGCTGACGATGCAATTTGT+GGG - chr1.4:70010853-70010872 MS.gene07236:CDS 40.0%
CAAACAGAGCCATAATGTCT+AGG - chr1.4:70013960-70013979 MS.gene07236:intron 40.0%
CACAACTCACTCTATCCTAT+GGG - chr1.4:70012715-70012734 MS.gene07236:intron 40.0%
CACTACAAATGCATAGCAAG+GGG + chr1.4:70010817-70010836 None:intergenic 40.0%
CTTCTTCCCCTATAATGAGA+AGG + chr1.4:70011284-70011303 None:intergenic 40.0%
GAACGAGAAACTAATCTTGC+TGG + chr1.4:70011401-70011420 None:intergenic 40.0%
TAGCCAAAGCAAATTTCCCA+AGG - chr1.4:70011355-70011374 MS.gene07236:intron 40.0%
TCACAACTCACTCTATCCTA+TGG - chr1.4:70012714-70012733 MS.gene07236:intron 40.0%
TCGTGACCCTTCTCATTATA+GGG - chr1.4:70011274-70011293 MS.gene07236:intron 40.0%
TCTCATCATTTCAACTGGAC+AGG + chr1.4:70014211-70014230 None:intergenic 40.0%
TGAGCAGAACTGTCTATGTT+GGG - chr1.4:70010697-70010716 MS.gene07236:CDS 40.0%
TGGTCCTACAGAATACAAAG+TGG + chr1.4:70012505-70012524 None:intergenic 40.0%
TGTATGTCAGTCTGAGTTTG+CGG - chr1.4:70014069-70014088 MS.gene07236:CDS 40.0%
TTAGGCCTTGAGGAATTTGA+TGG - chr1.4:70011692-70011711 MS.gene07236:intron 40.0%
TTGAGCAGAACTGTCTATGT+TGG - chr1.4:70010696-70010715 MS.gene07236:CDS 40.0%
! AAGATGTGGATGATGGTTAG+TGG - chr1.4:70011588-70011607 MS.gene07236:intron 40.0%
! AATTTGCTTTGGCTATGTCC+TGG + chr1.4:70011350-70011369 None:intergenic 40.0%
! CTAGACATTATGGCTCTGTT+TGG + chr1.4:70013962-70013981 None:intergenic 40.0%
! GGCTATATCTAGCTTGAATC+AGG - chr1.4:70011946-70011965 MS.gene07236:intron 40.0%
! TACCCTTGGGAAATTTGCTT+TGG + chr1.4:70011361-70011380 None:intergenic 40.0%
! TTTTCCCAGGTTGTTCATGA+TGG - chr1.4:70011098-70011117 MS.gene07236:intron 40.0%
!! AGCGACTCTTTGAAGTTTGA+CGG + chr1.4:70012538-70012557 None:intergenic 40.0%
!! ATCCCATATCTTTTGGGAGT+GGG - chr1.4:70012815-70012834 MS.gene07236:intron 40.0%
!! TGGGTGGTTCTAATGAAACA+AGG - chr1.4:70011969-70011988 MS.gene07236:intron 40.0%
!! TTTTGATGGGTGCCAATTAC+GGG - chr1.4:70010890-70010909 MS.gene07236:CDS 40.0%
AAGCTTATGTAGCAGCTGCA+GGG - chr1.4:70014786-70014805 MS.gene07236:CDS 45.0%
AAGGATCACATGCGAAAAGC+AGG - chr1.4:70011065-70011084 MS.gene07236:intron 45.0%
ACCTGGACAAACTCTTGCTA+CGG + chr1.4:70011547-70011566 None:intergenic 45.0%
ACGTTGTGAGGATTTACCCT+TGG + chr1.4:70011375-70011394 None:intergenic 45.0%
AGGATCACATGCGAAAAGCA+GGG - chr1.4:70011066-70011085 MS.gene07236:intron 45.0%
AGTGGAAATTGGGCCAGATA+TGG - chr1.4:70014092-70014111 MS.gene07236:CDS 45.0%
ATCCCTGTCACAGTTCATAG+AGG + chr1.4:70014648-70014667 None:intergenic 45.0%
ATGCCTCTATGAACTGTGAC+AGG - chr1.4:70014642-70014661 MS.gene07236:CDS 45.0%
CAGTATTCACAACAATGGCC+AGG - chr1.4:70010962-70010981 MS.gene07236:CDS 45.0%
CCAAAGAAGAACGTGTGTGT+TGG - chr1.4:70013729-70013748 MS.gene07236:intron 45.0%
CCAACACACACGTTCTTCTT+TGG + chr1.4:70013732-70013751 None:intergenic 45.0%
CCTACAAATTAGCCAAACCC+TGG - chr1.4:70014030-70014049 MS.gene07236:CDS 45.0%
CCTTCCATCATGAACAACCT+GGG + chr1.4:70011105-70011124 None:intergenic 45.0%
CGTGACCCTTCTCATTATAG+GGG - chr1.4:70011275-70011294 MS.gene07236:intron 45.0%
CGTTGTGAGGATTTACCCTT+GGG + chr1.4:70011374-70011393 None:intergenic 45.0%
CTCCACCAAACCAACTTCTA+AGG + chr1.4:70012989-70013008 None:intergenic 45.0%
CTGAAGTCTCTCACATCTAG+TGG - chr1.4:70012568-70012587 MS.gene07236:intron 45.0%
CTTAGTGCATCTTGAGCCTT+AGG - chr1.4:70012284-70012303 MS.gene07236:intron 45.0%
CTTTCTGGATATGCTGAGGT+AGG + chr1.4:70014587-70014606 None:intergenic 45.0%
GAACCCACTCCCAAAAGATA+TGG + chr1.4:70012821-70012840 None:intergenic 45.0%
GAGTTTGCGGAGTGGAAATT+GGG - chr1.4:70014082-70014101 MS.gene07236:CDS 45.0%
GATGCAATTTGTGGGTGTGA+TGG - chr1.4:70010861-70010880 MS.gene07236:CDS 45.0%
GCAATCCTCACCTTAGAAGT+TGG - chr1.4:70012976-70012995 MS.gene07236:CDS 45.0%
GCATGTGATCCTTAAGATCC+TGG + chr1.4:70011058-70011077 None:intergenic 45.0%
GCTCACATTGGTGTGAGATA+AGG - chr1.4:70013137-70013156 MS.gene07236:intron 45.0%
GGATTTGGAGAGAGACTGAA+AGG - chr1.4:70014148-70014167 MS.gene07236:CDS 45.0%
GGGAGAAACAATCCCAAAGA+TGG - chr1.4:70014821-70014840 MS.gene07236:CDS 45.0%
GGTGATTGTCTTGCTCTTTC+TGG + chr1.4:70014602-70014621 None:intergenic 45.0%
GTCGTGACCCTTCTCATTAT+AGG - chr1.4:70011273-70011292 MS.gene07236:intron 45.0%
GTCTATGTTGGGAATCTACC+TGG - chr1.4:70010708-70010727 MS.gene07236:CDS 45.0%
GTGCTCCTACATTAACCCAT+AGG + chr1.4:70012733-70012752 None:intergenic 45.0%
GTGTGAGGGAATATGATTCG+AGG - chr1.4:70011231-70011250 MS.gene07236:intron 45.0%
TATGTCCTGGACTGTAGCTA+CGG + chr1.4:70011337-70011356 None:intergenic 45.0%
TCAGGCCCAAAAACACAAGA+TGG - chr1.4:70013014-70013033 MS.gene07236:CDS 45.0%
TGAGGGAATATGATTCGAGG+CGG - chr1.4:70011234-70011253 MS.gene07236:intron 45.0%
TGAGTTTGCGGAGTGGAAAT+TGG - chr1.4:70014081-70014100 MS.gene07236:CDS 45.0%
TGCCTCTATGAACTGTGACA+GGG - chr1.4:70014643-70014662 MS.gene07236:CDS 45.0%
TGCTCTTTCTGGATATGCTG+AGG + chr1.4:70014591-70014610 None:intergenic 45.0%
TGTATTCTGTAGGACCACCA+CGG - chr1.4:70012508-70012527 MS.gene07236:intron 45.0%
TTCTGCAGCTTCCTCTATGA+GGG + chr1.4:70014768-70014787 None:intergenic 45.0%
TTGATCTAAAGGTTCCGCCA+AGG - chr1.4:70010790-70010809 MS.gene07236:CDS 45.0%
! AGCGACATTTGAAGCACCTA+AGG + chr1.4:70012303-70012322 None:intergenic 45.0%
! ATGATGGAAGGGCTACTACT+GGG - chr1.4:70011114-70011133 MS.gene07236:intron 45.0%
! CCAGGGTTTGGCTAATTTGT+AGG + chr1.4:70014033-70014052 None:intergenic 45.0%
! CCAGGTTGTTCATGATGGAA+GGG - chr1.4:70011103-70011122 MS.gene07236:intron 45.0%
! CCTCACCTTAGAAGTTGGTT+TGG - chr1.4:70012981-70013000 MS.gene07236:CDS 45.0%
! TTGGGGCTTTTATTACGCAG+AGG + chr1.4:70011485-70011504 None:intergenic 45.0%
!! AAGACCTGGAAAAAGCGTTC+CGG + chr1.4:70011205-70011224 None:intergenic 45.0%
!! CACCTTAGAAGTTGGTTTGG+TGG - chr1.4:70012984-70013003 MS.gene07236:CDS 45.0%
!! CATCCCATATCTTTTGGGAG+TGG - chr1.4:70012814-70012833 MS.gene07236:intron 45.0%
!! CCAAACCAACTTCTAAGGTG+AGG + chr1.4:70012984-70013003 None:intergenic 45.0%
!! CGACTCTTTGAAGTTTGACG+GGG + chr1.4:70012536-70012555 None:intergenic 45.0%
!! CTGCTAGCACTGTGCTTTTT+GGG + chr1.4:70011503-70011522 None:intergenic 45.0%
!! GCGACTCTTTGAAGTTTGAC+GGG + chr1.4:70012537-70012556 None:intergenic 45.0%
!! TGCTAGCACTGTGCTTTTTG+GGG + chr1.4:70011502-70011521 None:intergenic 45.0%
!! TGGTTTGGTGGAGTTGAATC+AGG - chr1.4:70012996-70013015 MS.gene07236:CDS 45.0%
!! TGTTGCTTTGATACAGCTGC+TGG - chr1.4:70014284-70014303 MS.gene07236:CDS 45.0%
!! TTCTAAGGTGAGGATTGCCA+AGG + chr1.4:70012974-70012993 None:intergenic 45.0%
!!! GGTGCTTCAAATGTCGCTTT+TGG - chr1.4:70012305-70012324 MS.gene07236:intron 45.0%
AAGGGCTACTACTGGGATTG+TGG - chr1.4:70011121-70011140 MS.gene07236:intron 50.0%
AATGTCCGTGTCTGCACAAG+AGG - chr1.4:70014718-70014737 MS.gene07236:CDS 50.0%
AGACAATCACCCGTGTTGGA+AGG - chr1.4:70014611-70014630 MS.gene07236:CDS 50.0%
AGCAAGACAATCACCCGTGT+TGG - chr1.4:70014607-70014626 MS.gene07236:CDS 50.0%
AGCTTATGTAGCAGCTGCAG+GGG - chr1.4:70014787-70014806 MS.gene07236:CDS 50.0%
ATTCACAACAATGGCCAGGG+TGG - chr1.4:70010966-70010985 MS.gene07236:CDS 50.0%
ATTCTGCCTCCCTTCCAACA+CGG + chr1.4:70014624-70014643 None:intergenic 50.0%
CAAGACCACAATCAAGGCCT+AGG - chr1.4:70011450-70011469 MS.gene07236:intron 50.0%
CAGGTCTTACGTTCGTGTGA+GGG - chr1.4:70011217-70011236 MS.gene07236:intron 50.0%
CCCTTCCATCATGAACAACC+TGG + chr1.4:70011106-70011125 None:intergenic 50.0%
CTTCTGCAGCTTCCTCTATG+AGG + chr1.4:70014769-70014788 None:intergenic 50.0%
GAAGCTTATGTAGCAGCTGC+AGG - chr1.4:70014785-70014804 MS.gene07236:CDS 50.0%
GACAATCACCCGTGTTGGAA+GGG - chr1.4:70014612-70014631 MS.gene07236:CDS 50.0%
GAGGGAATATGATTCGAGGC+GGG - chr1.4:70011235-70011254 MS.gene07236:intron 50.0%
GGATCACATGCGAAAAGCAG+GGG - chr1.4:70011067-70011086 MS.gene07236:intron 50.0%
GGCTTCCACTTCAGCAAATG+TGG + chr1.4:70014747-70014766 None:intergenic 50.0%
GGTGGCCCAATAATGTGTCT+AGG + chr1.4:70013053-70013072 None:intergenic 50.0%
GTATTCTGTAGGACCACCAC+GGG - chr1.4:70012509-70012528 MS.gene07236:intron 50.0%
GTGATCCTTAAGATCCTGGC+AGG + chr1.4:70011054-70011073 None:intergenic 50.0%
TCTCTTTCACGGATATCGCC+AGG + chr1.4:70010729-70010748 None:intergenic 50.0%
TCTTGCTGGTGAACGTTGTG+AGG + chr1.4:70011387-70011406 None:intergenic 50.0%
TGAAGTGGAAGCCCTCATAG+AGG - chr1.4:70014754-70014773 MS.gene07236:CDS 50.0%
TGCATCCTGCCAGGATCTTA+AGG - chr1.4:70011046-70011065 MS.gene07236:intron 50.0%
! ACAGCTGCTGGTTGTGAGTT+TGG - chr1.4:70014296-70014315 MS.gene07236:CDS 50.0%
! ACCTTGCAAGTCGCTTTGTG+GGG - chr1.4:70013991-70014010 MS.gene07236:CDS 50.0%
! CACCTTGCAAGTCGCTTTGT+GGG - chr1.4:70013990-70014009 MS.gene07236:intron 50.0%
! CAGCTGCTGGTTGTGAGTTT+GGG - chr1.4:70014297-70014316 MS.gene07236:CDS 50.0%
! CATGATGGAAGGGCTACTAC+TGG - chr1.4:70011113-70011132 MS.gene07236:intron 50.0%
! CCAAAAAGCACAGTGCTAGC+AGG - chr1.4:70011501-70011520 MS.gene07236:intron 50.0%
! CCCAGGTTGTTCATGATGGA+AGG - chr1.4:70011102-70011121 MS.gene07236:intron 50.0%
! CCTGCTAGCACTGTGCTTTT+TGG + chr1.4:70011504-70011523 None:intergenic 50.0%
! TCACCTTGCAAGTCGCTTTG+TGG - chr1.4:70013989-70014008 MS.gene07236:intron 50.0%
! TCTAGCTTGAATCAGGTGGG+TGG - chr1.4:70011953-70011972 MS.gene07236:intron 50.0%
!! AGGGGATGTTTGCTTTTCCC+AGG - chr1.4:70011085-70011104 MS.gene07236:intron 50.0%
!!! AGTTCCGGAACGCTTTTTCC+AGG - chr1.4:70011198-70011217 MS.gene07236:intron 50.0%
AATCACCCGTGTTGGAAGGG+AGG - chr1.4:70014615-70014634 MS.gene07236:CDS 55.0%
AATGCATAGCAAGGGGGCCT+TGG + chr1.4:70010810-70010829 None:intergenic 55.0%
ACCCCACAAAGCGACTTGCA+AGG + chr1.4:70013995-70014014 None:intergenic 55.0%
AGCTGCAGGGGAAAGACTGA+AGG - chr1.4:70014799-70014818 MS.gene07236:CDS 55.0%
ATCCTGGCAGGATGCAGAAG+AGG + chr1.4:70011042-70011061 None:intergenic 55.0%
CCAGGTCTTACGTTCGTGTG+AGG - chr1.4:70011216-70011235 MS.gene07236:intron 55.0%
CCTCACACGAACGTAAGACC+TGG + chr1.4:70011219-70011238 None:intergenic 55.0%
CGTGCACCCACACTAGTGAT+TGG + chr1.4:70012694-70012713 None:intergenic 55.0%
CTGCAGGGGAAAGACTGAAG+GGG - chr1.4:70014801-70014820 MS.gene07236:CDS 55.0%
CTTCTGCCTCTGGGCATCTT+AGG - chr1.4:70011674-70011693 MS.gene07236:intron 55.0%
GCCGTAGCAAGAGTTTGTCC+AGG - chr1.4:70011543-70011562 MS.gene07236:intron 55.0%
GCTGCAGGGGAAAGACTGAA+GGG - chr1.4:70014800-70014819 MS.gene07236:CDS 55.0%
GGAGACCTAGGCCTTGATTG+TGG + chr1.4:70011458-70011477 None:intergenic 55.0%
GGGTTGAGACTTCTGCCTCT+GGG - chr1.4:70011665-70011684 MS.gene07236:intron 55.0%
GTCAGTCTGAGTTTGCGGAG+TGG - chr1.4:70014074-70014093 MS.gene07236:CDS 55.0%
GTGCAGCTTCGACCCGTAAT+TGG + chr1.4:70010905-70010924 None:intergenic 55.0%
GTGCTAGCAGGAGTCCAAGT+AGG - chr1.4:70011513-70011532 MS.gene07236:intron 55.0%
TCAAGGCCTAAGATGCCCAG+AGG + chr1.4:70011683-70011702 None:intergenic 55.0%
TCCTGGCAGGATGCAGAAGA+GGG + chr1.4:70011041-70011060 None:intergenic 55.0%
TCTGGGCATCTTAGGCCTTG+AGG - chr1.4:70011682-70011701 MS.gene07236:intron 55.0%
TGGATATTCCTCGACCACCC+TGG + chr1.4:70010983-70011002 None:intergenic 55.0%
TTCTGCCTCCCTTCCAACAC+GGG + chr1.4:70014623-70014642 None:intergenic 55.0%
TTGGGATTGAGTGGGTGGAC+TGG + chr1.4:70013497-70013516 None:intergenic 55.0%
! AGGCGGGACTCTAGAAGTCT+TGG - chr1.4:70011251-70011270 MS.gene07236:intron 55.0%
! GGCAGCCACATTTGCTGAAG+TGG - chr1.4:70014739-70014758 MS.gene07236:CDS 55.0%
! TAGTAGTGTTGGGCGTGAGC+AGG - chr1.4:70013094-70013113 MS.gene07236:intron 55.0%
! TGCAAGTCGCTTTGTGGGGT+CGG - chr1.4:70013995-70014014 MS.gene07236:CDS 55.0%
! TGGGTTGAGACTTCTGCCTC+TGG - chr1.4:70011664-70011683 MS.gene07236:intron 55.0%
!! AGCTTGACGGCTCTGAGTTC+CGG - chr1.4:70011183-70011202 MS.gene07236:intron 55.0%
!! CGCAGAGGTAATGGAGACCT+AGG + chr1.4:70011470-70011489 None:intergenic 55.0%
AACAATGGCCAGGGTGGTCG+AGG - chr1.4:70010972-70010991 MS.gene07236:CDS 60.0%
CGGGTCGAAGCTGCACATGT+TGG - chr1.4:70010909-70010928 MS.gene07236:CDS 60.0%
CTACGGCTCCTGCTCCTACT+TGG + chr1.4:70011530-70011549 None:intergenic 60.0%
CTGGACTGTAGCTACGGCTG+CGG + chr1.4:70011331-70011350 None:intergenic 60.0%
GAAGATATAGCCGCAGCCGC+AGG - chr1.4:70011300-70011319 MS.gene07236:intron 60.0%
GCAGGAGTCCAAGTAGGAGC+AGG - chr1.4:70011519-70011538 MS.gene07236:intron 60.0%
GGCTGCCTCTTGTGCAGACA+CGG + chr1.4:70014726-70014745 None:intergenic 60.0%
TGAAGTTTGACGGGGACCCG+TGG + chr1.4:70012528-70012547 None:intergenic 60.0%
! GCAAGTCGCTTTGTGGGGTC+GGG - chr1.4:70013996-70014015 MS.gene07236:CDS 60.0%
!! GGATTGAGTGGGTGGACTGG+TGG + chr1.4:70013494-70013513 None:intergenic 60.0%
AGTTTGACGGGGACCCGTGG+TGG + chr1.4:70012525-70012544 None:intergenic 65.0%
CGCAGCCGTAGCTACAGTCC+AGG - chr1.4:70011329-70011348 MS.gene07236:intron 65.0%
GCATAGCAAGGGGGCCTTGG+CGG + chr1.4:70010807-70010826 None:intergenic 65.0%
GCCCTCTTCTGCATCCTGCC+AGG - chr1.4:70011037-70011056 MS.gene07236:intron 65.0%
! GTCGCTTTGTGGGGTCGGGT+CGG - chr1.4:70014000-70014019 MS.gene07236:CDS 65.0%
TACGGCTGCGGCTGCACCTG+CGG + chr1.4:70011319-70011338 None:intergenic 70.0%
TGCGGCTGCACCTGCGGCTG+CGG + chr1.4:70011313-70011332 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 70010684 70014871 70010684 ID=MS.gene07236
chr1.4 mRNA 70010684 70014871 70010684 ID=MS.gene07236.t1;Parent=MS.gene07236
chr1.4 exon 70013991 70014871 70013991 ID=MS.gene07236.t1.exon1;Parent=MS.gene07236.t1
chr1.4 CDS 70013991 70014871 70013991 ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1
chr1.4 exon 70013546 70013630 70013546 ID=MS.gene07236.t1.exon2;Parent=MS.gene07236.t1
chr1.4 CDS 70013546 70013630 70013546 ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1
chr1.4 exon 70012952 70013035 70012952 ID=MS.gene07236.t1.exon3;Parent=MS.gene07236.t1
chr1.4 CDS 70012952 70013035 70012952 ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1
chr1.4 exon 70010684 70010992 70010684 ID=MS.gene07236.t1.exon4;Parent=MS.gene07236.t1
chr1.4 CDS 70010684 70010992 70010684 ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1
Gene Sequence

>MS.gene07236

ATGAGTAGACATTTGAGCAGAACTGTCTATGTTGGGAATCTACCTGGCGATATCCGTGAAAGAGAAGTTAAACATTTGTTTATGAAGTATGGTCACATAACTCGCATTGATCTAAAGGTTCCGCCAAGGCCCCCTTGCTATGCATTTGTAGTGTTTAACGATGCTCTAAATGCTGACGATGCAATTTGTGGGTGTGATGGCTATGATTTTGATGGGTGCCAATTACGGGTCGAAGCTGCACATGTTGGTTATTGTAATTCATCTTCAAGAGATCGATACAGTATTCACAACAATGGCCAGGGTGGTCGAGGAATATCCAGTCACTCTGAATATCGTGTTCTAGTCAATGGACTGCCCTCTTCTGCATCCTGCCAGGATCTTAAGGATCACATGCGAAAAGCAGGGGATGTTTGCTTTTCCCAGGTTGTTCATGATGGAAGGGCTACTACTGGGATTGTGGATTACACGAACTGCGATGATATGAAATATGCTATCAAAAAGCTTGACGGCTCTGAGTTCCGGAACGCTTTTTCCAGGTCTTACGTTCGTGTGAGGGAATATGATTCGAGGCGGGACTCTAGAAGTCTTGGTCGTGACCCTTCTCATTATAGGGGAAGAAGATATAGCCGCAGCCGCAGGTGCAGCCGCAGCCGTAGCTACAGTCCAGGACATAGCCAAAGCAAATTTCCCAAGGGTAAATCCTCACAACGTTCACCAGCAAGATTAGTTTCTCGTTCTCGCTCCAGATCTAGATCCTGTTCTTTATCAAGACCACAATCAAGGCCTAGGTCTCCATTACCTCTGCGTAATAAAAGCCCCAAAAAGCACAGTGCTAGCAGGAGTCCAAGTAGGAGCAGGAGCCGTAGCAAGAGTTTGTCCAGGTAAGCTCTGATTGTTACTAGTAAAGATGTGGATGATGGTTAGTGGTTGCTACAAAGTTTTTTCTAGTAATATTTGACGTTGGCTGAGAAACACTTATTTGGGTTGAGACTTCTGCCTCTGGGCATCTTAGGCCTTGAGGAATTTGATGGACCTTAATTTTGTATGGTAGTAGACTGTTAATTTCAAAACTTAGTATTTGGTTCCTTGTTTGGGTTTATTTGGTAATTGGTAGTGGCTTTATTATATTATTATAAATAAAAATGTTTGTCACAAAAAAAGTTGTTCCTCCTTTTGCTGTAAATTGTAATGGTTTGTGTTTATTTCGGCGGTGTATGCTTAACCGTGTTTACGTTAAACAGAATGGATAACCTTATAATGGAGGCTATATCTAGCTTGAATCAGGTGGGTGGTTCTAATGAAACAAGGATTGCTAATTTCATAGAGGTATTATTCTGATTTCTAAGCCCTTCTTTTATCTTTTCTGCTTTTAATTCATTTAATTCGGTTGTTGGCATGCTGTAATTCTGACTTTATGATTGTAGATGTTACAACACATAATAAATATCACATAAAATCATTGTTCTACCTGAACAGTATTTTAGAATATCTTAGAAAATCTCTCGTCCATATTCCATGATGTTATTTGTTTAATTATGATTAGGAGTTGATATTAGTACAAATACTGGTTAGTACTTCGTCTGAGAGCGAGCCTTGAAATCTTAGTGCATCTTGAGCCTTAGGTGCTTCAAATGTCGCTTTTGGTAAAATGTGATCTATGATGCTATTTCAACTTTGAATTGACTAAATCTTATTTGGTTAAGAAATGACATTATGTTGATTATTAGAATACTAACTTAAGTGTTATAGCATTCCATTTGGTTGGATACTTCTCTATTTTATAAAATTTTGTTTGTGTTAAACATAAGTTGAATTTCACCACTTTGTATTCTGTAGGACCACCACGGGTCCCCGTCAAACTTCAAAGAGTCGCTGTCAGCAAGACTGAAGTCTCTCACATCTAGTGGAAAACTGATCAAGGTAACATGTTTCATTATGTCATAACTATTCCATCTGATGCAAACATACAATAAAAATTGTCATAAATGCATTTGTTTGTATTTTTGTCCAATCACTAGTGTGGGTGCACGTCACAACTCACTCTATCCTATGGGTTAATGTAGGAGCACAAATATTGAATGAGATTGAAACGTGGATATCCTATTTATAGTAGAGGTTTACCTGTCTTTACATCCCATATCTTTTGGGAGTGGGTTCTCCTCTACAATACTGTTTTATATGGACAAATACAAAATCAAACATTTACTCTAAGATGGAGTGAAATAGTATTGGGAAAAATCAAAGTCTTACATTGGCTAGAAATAAGGCCTAAGTAGAGCTTATAAATCCTTGGCAATCCTCACCTTAGAAGTTGGTTTGGTGGAGTTGAATCAGGCCCAAAAACACAAGATGGTATTAGTGTCTATCCTAGACACATTATTGGGCCACCAAATTAGCCATGAACTAAGTTTAGTAGTGTTGGGCGTGAGCAGGTGTATTAGAAAAAACTCAATGCTCACATTGGTGTGAGATAAGGCTTGAATAGAACTTATAGGGTCTGTTTGGTAAGCCACATAAATGAGCTTCTAGCTTCTAGCTTTTAGCTTATAAGCTCGTTTGACAAAAGTAGCTCTGTTTGGTAACACTTTTTTATTATGAGCTTATAGCTTTTTTCATGAGCTTATAAGCTATTTTTCAGAAGCTATTCCAAGTAGCGTTTGAGCTTATAACTTATAGCTTCTCACTTTTATTTCCAGTTTTACCCTTATTATTCTAACTAAATTCCATTTTTGCCCTTAATCTTCTCTTTCATTTCACGTTTCTGGGTTGCTGTGTTTTTTGTTCATCTTTCATTTCACGCTTACTTTCCACCAGTCCACCCACTCAATCCCAATTATTTTCAGTGTCACACACAACATCAACTTCTTTTTTGATTGCTAGCTTTCTTTCCCATTTTTTCTTTCTTTGCGAACTTTTCAATCAAACTCATTAATGAAACAATACTGAGTTCTTCTCCTCTTCATCATCTTCTAGCATTGACAAGGGTAATACAAATTCAGCTCACCCATAGTTCCTAAAAAAATCAATTTTCATGTTTTATATGCTCCAAAGAAGAACGTGTGTGTTGGCAACACAAACACAGATGAAAATGAACCAGAGTTCATTTATATAATAAAAATGTCCTTTTATGTAATTTTACATCTATCAGCTATTGAACCGCTAATTTTACCAAACACTTCAACTAGCTTATCAGTCATCAGTCATCAGCTAGCATATCAGCTAAAAGCTATCAGCTAAAAGCTATCAGCTAGCTTATCAGCTATCCGCTATTTTTACCAAACAGAGCCATAATGTCTAGGCAATCTTCACCTTGCAAGTCGCTTTGTGGGGTCGGGTCGGCCCCAAACCTACAAATTAGCCAAACCCTGGTATTACCTTATATGACTGTATGTCAGTCTGAGTTTGCGGAGTGGAAATTGGGCCAGATATGGAGTAATAGCTGAATAAAAAAAATCTCAGGGCAAGGATTTGGAGAGAGACTGAAAGGAAAAATGAAAGATGTTGAGTTAAAATGAAAATAGTGACCTGTCCAGTTGAAATGATGAGAAATAATCCTTGTAATAATAAGCATGCTACTTGTTTTACTCTATTATCTGTATTTGTTGCTTTGATACAGCTGCTGGTTGTGAGTTTGGGCTGAGATTCTAGTATATAGTATACAACTCTACATTTTTTAGTGTAGACTTAGAAAAAATTAGTATTTTCTGATGTGAATCAAAAATAGTTTTTGTTCTTTATATTTTAGGAATCAATATTTTTTCTTGATTTAGTGTTGTACATTTATTGTGAGCCATATTTGAATGCTATTCTCATTTTTAGATGTCATATTTACTGGTTTCAATTAGAGATCATACTCATGGGTTGAGTTTTATATTTCAGGTGAAAAAGTACAGGATTGCGCCTACCTCAGCATATCCAGAAAGAGCAAGACAATCACCCGTGTTGGAAGGGAGGCAGAATGCCTCTATGAACTGTGACAGGGATTTGAGCTATAGCCTTACACAGTCTGAGTTAGACTTTCAATTAGCAATGGTAATGTCCGTGTCTGCACAAGAGGCAGCCACATTTGCTGAAGTGGAAGCCCTCATAGAGGAAGCTGCAGAAGCTTATGTAGCAGCTGCAGGGGAAAGACTGAAGGGGAGAAACAATCCCAAAGATGGTAAATCTTGGCTTTTCCTTCCTTTGTAA

Protein sequence

>MS.gene07236.t1

MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFNDALNADDAICGCDGYDFDGCQLRVEAAHVGYCNSSSRDRYSIHNNGQGGRGISSHSEYRVLVNGLPSSASCQDLKDHMRKAGDVCFSQVVHDGRATTGIVDYTNCDDMKYAIKKLDGSEFRNAFSRSYVRVREYDSRRDSRSLGRDPSHYRGRRYSRSRRCSRSRSYSPGHSQSKFPKGKSSQRSPARLVSRSRSRSRSCSLSRPQSRPRSPLPLRNKSPKKHSASRSPSRSRSRSKSLSRMDNLIMEAISSLNQVGGSNETRIANFIEDHHGSPSNFKESLSARLKSLTSSGKLIKVKKYRIAPTSAYPERARQSPVLEGRQNASMNCDRDLSYSLTQSELDFQLAMVMSVSAQEAATFAEVEALIEEAAEAYVAAAGERLKGRNNPKDGKSWLFLPL