Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07236.t1 | XP_024639446.1 | 90.5 | 444 | 42 | 0 | 1 | 444 | 1 | 444 | 1.40E-167 | 599.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07236.t1 | Q9XFR5 | 66.2 | 195 | 64 | 1 | 1 | 195 | 1 | 193 | 3.0e-65 | 250.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07236.t1 | G7IEL3 | 90.5 | 444 | 42 | 0 | 1 | 444 | 1 | 444 | 1.0e-167 | 599.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene011973 | MS.gene07236 | PPI |
MS.gene07236 | MS.gene90116 | PPI |
MS.gene07236 | MS.gene03728 | PPI |
MS.gene07236 | MS.gene007767 | PPI |
MS.gene040757 | MS.gene07236 | PPI |
MS.gene049739 | MS.gene07236 | PPI |
MS.gene74239 | MS.gene07236 | PPI |
MS.gene061705 | MS.gene07236 | PPI |
MS.gene047872 | MS.gene07236 | PPI |
MS.gene93333 | MS.gene07236 | PPI |
MS.gene057666 | MS.gene07236 | PPI |
MS.gene073734 | MS.gene07236 | PPI |
MS.gene94627 | MS.gene07236 | PPI |
MS.gene64804 | MS.gene07236 | PPI |
MS.gene07236 | MS.gene52116 | PPI |
MS.gene061098 | MS.gene07236 | PPI |
MS.gene35337 | MS.gene07236 | PPI |
MS.gene07236 | MS.gene035486 | PPI |
MS.gene07236 | MS.gene90884 | PPI |
MS.gene046159 | MS.gene07236 | PPI |
MS.gene073119 | MS.gene07236 | PPI |
MS.gene040807 | MS.gene07236 | PPI |
MS.gene026372 | MS.gene07236 | PPI |
MS.gene07236 | MS.gene91510 | PPI |
MS.gene07236 | MS.gene67483 | PPI |
MS.gene09394 | MS.gene07236 | PPI |
MS.gene59503 | MS.gene07236 | PPI |
MS.gene003478 | MS.gene07236 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07236.t1 | MTR_1g088180 | 94.144 | 444 | 26 | 0 | 1 | 444 | 1 | 444 | 0.0 | 704 |
MS.gene07236.t1 | MTR_8g058530 | 78.571 | 280 | 54 | 2 | 1 | 274 | 1 | 280 | 5.90e-119 | 350 |
MS.gene07236.t1 | MTR_7g108810 | 78.648 | 281 | 54 | 2 | 1 | 275 | 102 | 382 | 4.32e-117 | 348 |
MS.gene07236.t1 | MTR_1g083400 | 64.730 | 241 | 81 | 2 | 1 | 238 | 32 | 271 | 8.69e-85 | 262 |
MS.gene07236.t1 | MTR_7g112760 | 67.179 | 195 | 62 | 1 | 1 | 195 | 1 | 193 | 1.33e-78 | 246 |
MS.gene07236.t1 | MTR_3g092580 | 62.000 | 200 | 64 | 1 | 1 | 188 | 108 | 307 | 2.67e-75 | 241 |
MS.gene07236.t1 | MTR_7g112760 | 54.577 | 284 | 90 | 4 | 1 | 284 | 1 | 245 | 3.97e-70 | 223 |
MS.gene07236.t1 | MTR_2g031870 | 60.345 | 116 | 43 | 2 | 294 | 406 | 98 | 213 | 2.06e-35 | 132 |
MS.gene07236.t1 | MTR_2g031870 | 60.345 | 116 | 43 | 2 | 294 | 406 | 124 | 239 | 3.92e-35 | 132 |
MS.gene07236.t1 | MTR_8g494240 | 59.483 | 116 | 44 | 2 | 294 | 406 | 122 | 237 | 8.48e-34 | 129 |
MS.gene07236.t1 | MTR_8g494240 | 59.483 | 116 | 44 | 2 | 294 | 406 | 122 | 237 | 1.58e-33 | 128 |
MS.gene07236.t1 | MTR_8g494240 | 59.483 | 116 | 44 | 2 | 294 | 406 | 122 | 237 | 7.30e-33 | 129 |
MS.gene07236.t1 | MTR_8g092810 | 50.376 | 133 | 54 | 3 | 290 | 410 | 120 | 252 | 9.61e-30 | 121 |
MS.gene07236.t1 | MTR_5g015340 | 37.121 | 132 | 76 | 3 | 272 | 399 | 101 | 229 | 5.34e-14 | 72.8 |
MS.gene07236.t1 | MTR_5g015340 | 37.121 | 132 | 76 | 3 | 272 | 399 | 101 | 229 | 5.34e-14 | 72.8 |
MS.gene07236.t1 | MTR_5g015340 | 37.121 | 132 | 76 | 3 | 272 | 399 | 101 | 229 | 1.06e-13 | 72.8 |
MS.gene07236.t1 | MTR_8g032130 | 74.359 | 39 | 10 | 0 | 371 | 409 | 1 | 39 | 7.29e-12 | 62.4 |
MS.gene07236.t1 | MTR_4g097130 | 31.250 | 144 | 88 | 5 | 271 | 406 | 111 | 251 | 2.60e-11 | 64.7 |
MS.gene07236.t1 | MTR_4g097130 | 31.250 | 144 | 88 | 5 | 271 | 406 | 111 | 251 | 2.75e-11 | 64.7 |
MS.gene07236.t1 | MTR_4g097130 | 33.071 | 127 | 75 | 4 | 287 | 406 | 133 | 256 | 2.99e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07236.t1 | AT1G02840 | 60.289 | 277 | 91 | 3 | 1 | 269 | 1 | 266 | 4.12e-83 | 257 |
MS.gene07236.t1 | AT1G02840 | 60.289 | 277 | 91 | 3 | 1 | 269 | 1 | 266 | 4.12e-83 | 257 |
MS.gene07236.t1 | AT1G02840 | 60.289 | 277 | 91 | 3 | 1 | 269 | 1 | 266 | 4.12e-83 | 257 |
MS.gene07236.t1 | AT1G02840 | 60.289 | 277 | 91 | 3 | 1 | 269 | 1 | 266 | 6.20e-83 | 257 |
MS.gene07236.t1 | AT1G02840 | 62.992 | 254 | 84 | 2 | 1 | 246 | 1 | 252 | 3.80e-82 | 256 |
MS.gene07236.t1 | AT1G09140 | 64.615 | 195 | 67 | 1 | 1 | 195 | 1 | 193 | 2.02e-77 | 242 |
MS.gene07236.t1 | AT1G09140 | 64.615 | 195 | 67 | 1 | 1 | 195 | 1 | 193 | 2.64e-77 | 242 |
MS.gene07236.t1 | AT1G09140 | 64.615 | 195 | 67 | 1 | 1 | 195 | 1 | 193 | 3.47e-77 | 241 |
MS.gene07236.t1 | AT4G02430 | 63.819 | 199 | 56 | 3 | 1 | 188 | 1 | 194 | 6.24e-74 | 233 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 9.82e-74 | 234 |
MS.gene07236.t1 | AT4G02430 | 63.819 | 199 | 56 | 3 | 1 | 188 | 1 | 194 | 2.25e-73 | 233 |
MS.gene07236.t1 | AT3G49430 | 58.291 | 199 | 72 | 1 | 1 | 188 | 1 | 199 | 3.32e-73 | 233 |
MS.gene07236.t1 | AT4G02430 | 63.483 | 178 | 52 | 2 | 1 | 167 | 1 | 176 | 6.85e-66 | 209 |
MS.gene07236.t1 | AT4G02430 | 61.494 | 174 | 51 | 3 | 26 | 188 | 24 | 192 | 7.58e-59 | 194 |
MS.gene07236.t1 | AT1G49950 | 41.803 | 122 | 61 | 4 | 294 | 407 | 120 | 239 | 4.04e-16 | 79.3 |
MS.gene07236.t1 | AT1G49950 | 41.803 | 122 | 61 | 4 | 294 | 407 | 120 | 239 | 4.04e-16 | 79.3 |
MS.gene07236.t1 | AT1G49950 | 41.803 | 122 | 61 | 4 | 294 | 407 | 120 | 239 | 4.04e-16 | 79.3 |
MS.gene07236.t1 | AT5G67580 | 32.812 | 128 | 80 | 4 | 284 | 406 | 114 | 240 | 3.45e-11 | 64.3 |
MS.gene07236.t1 | AT5G67580 | 32.812 | 128 | 80 | 4 | 284 | 406 | 114 | 240 | 3.45e-11 | 64.3 |
Find 130 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTGATTGTCTTGCTCTTTC+TGG | 0.066799 | 1.4:+70010934 | None:intergenic |
AAGCCAAGATTTACCATCTT+TGG | 0.173726 | 1.4:+70010699 | None:intergenic |
AAACATTTGTTTATGAAGTA+TGG | 0.237511 | 1.4:-70014780 | MS.gene07236:CDS |
TCGTGACCCTTCTCATTATA+GGG | 0.265643 | 1.4:-70014259 | MS.gene07236:CDS |
GTGCAGCTTCGACCCGTAAT+TGG | 0.279387 | 1.4:+70014631 | None:intergenic |
AGCCAAGATTTACCATCTTT+GGG | 0.322088 | 1.4:+70010700 | None:intergenic |
TAGATATAGCCTCCATTATA+AGG | 0.330489 | 1.4:+70013599 | None:intergenic |
AGCTTGACGGCTCTGAGTTC+CGG | 0.330618 | 1.4:-70014350 | MS.gene07236:CDS |
CTACGGCTCCTGCTCCTACT+TGG | 0.345238 | 1.4:+70014006 | None:intergenic |
TACCCTTGGGAAATTTGCTT+TGG | 0.364511 | 1.4:+70014175 | None:intergenic |
GTCGTGACCCTTCTCATTAT+AGG | 0.367295 | 1.4:-70014260 | MS.gene07236:CDS |
TGCATCCTGCCAGGATCTTA+AGG | 0.372928 | 1.4:-70014487 | MS.gene07236:CDS |
CAGAATGGATAACCTTATAA+TGG | 0.373169 | 1.4:-70013611 | MS.gene07236:CDS |
AATGTTTAACTTCTCTTTCA+CGG | 0.383899 | 1.4:+70014796 | None:intergenic |
CCCAGGTTGTTCATGATGGA+AGG | 0.411711 | 1.4:-70014431 | MS.gene07236:CDS |
AGCGACTCTTTGAAGTTTGA+CGG | 0.414603 | 1.4:+70012998 | None:intergenic |
GGCTATATCTAGCTTGAATC+AGG | 0.419555 | 1.4:-70013587 | MS.gene07236:CDS |
GAACGAGAAACTAATCTTGC+TGG | 0.420598 | 1.4:+70014135 | None:intergenic |
TGCGGCTGCACCTGCGGCTG+CGG | 0.428666 | 1.4:+70014223 | None:intergenic |
GCCCTCTTCTGCATCCTGCC+AGG | 0.434027 | 1.4:-70014496 | MS.gene07236:CDS |
CGTTGTGAGGATTTACCCTT+GGG | 0.434420 | 1.4:+70014162 | None:intergenic |
GAAGCTTATGTAGCAGCTGC+AGG | 0.447550 | 1.4:-70010748 | MS.gene07236:CDS |
AGTCTAACTCAGACTGTGTA+AGG | 0.449162 | 1.4:+70010854 | None:intergenic |
AATTTGCTTTGGCTATGTCC+TGG | 0.451019 | 1.4:+70014186 | None:intergenic |
ATGCCTCTATGAACTGTGAC+AGG | 0.451365 | 1.4:-70010891 | MS.gene07236:CDS |
TTGAGCAGAACTGTCTATGT+TGG | 0.452806 | 1.4:-70014837 | MS.gene07236:CDS |
GAATATCGTGTTCTAGTCAA+TGG | 0.452895 | 1.4:-70014522 | MS.gene07236:CDS |
ATCCCAAAGATGGTAAATCT+TGG | 0.454228 | 1.4:-70010702 | MS.gene07236:CDS |
CATAACTCGCATTGATCTAA+AGG | 0.464349 | 1.4:-70014754 | MS.gene07236:CDS |
TGAGCAGAACTGTCTATGTT+GGG | 0.467645 | 1.4:-70014836 | MS.gene07236:CDS |
GCGACTCTTTGAAGTTTGAC+GGG | 0.468645 | 1.4:+70012999 | None:intergenic |
TTGTGGTCTTGATAAAGAAC+AGG | 0.470584 | 1.4:+70014095 | None:intergenic |
AAGGATCACATGCGAAAAGC+AGG | 0.471288 | 1.4:-70014468 | MS.gene07236:CDS |
GGCAGCCACATTTGCTGAAG+TGG | 0.473979 | 1.4:-70010794 | MS.gene07236:CDS |
AACAATGGCCAGGGTGGTCG+AGG | 0.475550 | 1.4:-70014561 | MS.gene07236:CDS |
CATGATGGAAGGGCTACTAC+TGG | 0.489348 | 1.4:-70014420 | MS.gene07236:CDS |
CTTCTGCAGCTTCCTCTATG+AGG | 0.491892 | 1.4:+70010767 | None:intergenic |
GCATGTGATCCTTAAGATCC+TGG | 0.492160 | 1.4:+70014478 | None:intergenic |
GAAGATATAGCCGCAGCCGC+AGG | 0.494953 | 1.4:-70014233 | MS.gene07236:CDS |
CTTTATCAAGACCACAATCA+AGG | 0.498752 | 1.4:-70014089 | MS.gene07236:CDS |
CGCAGCCGTAGCTACAGTCC+AGG | 0.500875 | 1.4:-70014204 | MS.gene07236:CDS |
CTGAAGTCTCTCACATCTAG+TGG | 0.502259 | 1.4:-70012965 | MS.gene07236:CDS |
TACGGCTGCGGCTGCACCTG+CGG | 0.503939 | 1.4:+70014217 | None:intergenic |
CAAGACCACAATCAAGGCCT+AGG | 0.505060 | 1.4:-70014083 | MS.gene07236:CDS |
TAAAGAACAGGATCTAGATC+TGG | 0.509339 | 1.4:+70014107 | None:intergenic |
CCCTTCCATCATGAACAACC+TGG | 0.514903 | 1.4:+70014430 | None:intergenic |
AGGCGGGACTCTAGAAGTCT+TGG | 0.515579 | 1.4:-70014282 | MS.gene07236:CDS |
TTCTGCCTCCCTTCCAACAC+GGG | 0.517994 | 1.4:+70010913 | None:intergenic |
TTCTGCAGCTTCCTCTATGA+GGG | 0.519176 | 1.4:+70010768 | None:intergenic |
CAGGTCTTACGTTCGTGTGA+GGG | 0.523597 | 1.4:-70014316 | MS.gene07236:CDS |
ATCTAGTGGAAAACTGATCA+AGG | 0.524604 | 1.4:-70012951 | MS.gene07236:intron |
TCTCTTTCACGGATATCGCC+AGG | 0.525115 | 1.4:+70014807 | None:intergenic |
CAGTATTCACAACAATGGCC+AGG | 0.526282 | 1.4:-70014571 | MS.gene07236:CDS |
GGCTTCCACTTCAGCAAATG+TGG | 0.527029 | 1.4:+70010789 | None:intergenic |
CCAGGTCTTACGTTCGTGTG+AGG | 0.529487 | 1.4:-70014317 | MS.gene07236:CDS |
AGCAAGACAATCACCCGTGT+TGG | 0.529523 | 1.4:-70010926 | MS.gene07236:CDS |
GCAGGAGTCCAAGTAGGAGC+AGG | 0.530125 | 1.4:-70014014 | MS.gene07236:CDS |
GTCTATGTTGGGAATCTACC+TGG | 0.530479 | 1.4:-70014825 | MS.gene07236:CDS |
AGCTGTAGTATTACAAAGGA+AGG | 0.530942 | 1.4:+70010674 | None:intergenic |
AACACGATATTCAGAGTGAC+TGG | 0.532664 | 1.4:+70014533 | None:intergenic |
AAGGGCTACTACTGGGATTG+TGG | 0.536560 | 1.4:-70014412 | MS.gene07236:CDS |
CCAGGTTGTTCATGATGGAA+GGG | 0.536752 | 1.4:-70014430 | MS.gene07236:CDS |
AGACAATCACCCGTGTTGGA+AGG | 0.540537 | 1.4:-70010922 | MS.gene07236:CDS |
TGCTCTTTCTGGATATGCTG+AGG | 0.541893 | 1.4:+70010945 | None:intergenic |
GACAATCACCCGTGTTGGAA+GGG | 0.544342 | 1.4:-70010921 | MS.gene07236:CDS |
GCCGTAGCAAGAGTTTGTCC+AGG | 0.544644 | 1.4:-70013990 | MS.gene07236:intron |
CTTTCTGGATATGCTGAGGT+AGG | 0.546286 | 1.4:+70010949 | None:intergenic |
CTTCTTCCCCTATAATGAGA+AGG | 0.548764 | 1.4:+70014252 | None:intergenic |
ACCTGGACAAACTCTTGCTA+CGG | 0.549295 | 1.4:+70013989 | None:intergenic |
AAGGATTGCTAATTTCATAG+AGG | 0.551226 | 1.4:-70013545 | MS.gene07236:intron |
TTCTTCCCCTATAATGAGAA+GGG | 0.552088 | 1.4:+70014253 | None:intergenic |
GTGATCCTTAAGATCCTGGC+AGG | 0.553887 | 1.4:+70014482 | None:intergenic |
GGCTGCCTCTTGTGCAGACA+CGG | 0.556041 | 1.4:+70010810 | None:intergenic |
ACGTTGTGAGGATTTACCCT+TGG | 0.556462 | 1.4:+70014161 | None:intergenic |
GTGCTAGCAGGAGTCCAAGT+AGG | 0.558874 | 1.4:-70014020 | MS.gene07236:CDS |
GGGAGAAACAATCCCAAAGA+TGG | 0.562021 | 1.4:-70010712 | MS.gene07236:CDS |
AATGCTGACGATGCAATTTG+TGG | 0.562206 | 1.4:-70014681 | MS.gene07236:CDS |
ATTCTGCCTCCCTTCCAACA+CGG | 0.567843 | 1.4:+70010912 | None:intergenic |
AGCTGCAGGGGAAAGACTGA+AGG | 0.570597 | 1.4:-70010734 | MS.gene07236:CDS |
AACACTACAAATGCATAGCA+AGG | 0.573032 | 1.4:+70014717 | None:intergenic |
GTTAGACTTTCAATTAGCAA+TGG | 0.573973 | 1.4:-70010839 | MS.gene07236:CDS |
AGGATCACATGCGAAAAGCA+GGG | 0.574593 | 1.4:-70014467 | MS.gene07236:CDS |
AATGTCCGTGTCTGCACAAG+AGG | 0.580785 | 1.4:-70010815 | MS.gene07236:CDS |
CTGGACTGTAGCTACGGCTG+CGG | 0.581379 | 1.4:+70014205 | None:intergenic |
TATATCTAGCTTGAATCAGG+TGG | 0.583989 | 1.4:-70013584 | MS.gene07236:CDS |
AAGCTTATGTAGCAGCTGCA+GGG | 0.584325 | 1.4:-70010747 | MS.gene07236:CDS |
ATCCTGGCAGGATGCAGAAG+AGG | 0.584528 | 1.4:+70014494 | None:intergenic |
CGCAGAGGTAATGGAGACCT+AGG | 0.588079 | 1.4:+70014066 | None:intergenic |
AGCTTATGTAGCAGCTGCAG+GGG | 0.588273 | 1.4:-70010746 | MS.gene07236:CDS |
ATGATGGAAGGGCTACTACT+GGG | 0.595339 | 1.4:-70014419 | MS.gene07236:CDS |
GATGCAATTTGTGGGTGTGA+TGG | 0.595466 | 1.4:-70014672 | MS.gene07236:CDS |
ATCCCTGTCACAGTTCATAG+AGG | 0.596019 | 1.4:+70010888 | None:intergenic |
TGAAGTTTGACGGGGACCCG+TGG | 0.597796 | 1.4:+70013008 | None:intergenic |
CCTCACACGAACGTAAGACC+TGG | 0.598258 | 1.4:+70014317 | None:intergenic |
GTGTGAGGGAATATGATTCG+AGG | 0.600035 | 1.4:-70014302 | MS.gene07236:CDS |
ATGCTGACGATGCAATTTGT+GGG | 0.600261 | 1.4:-70014680 | MS.gene07236:CDS |
ACACTACAAATGCATAGCAA+GGG | 0.601578 | 1.4:+70014718 | None:intergenic |
GTATTCTGTAGGACCACCAC+GGG | 0.603546 | 1.4:-70013024 | MS.gene07236:intron |
TCTTGCTGGTGAACGTTGTG+AGG | 0.603550 | 1.4:+70014149 | None:intergenic |
TCCTGGCAGGATGCAGAAGA+GGG | 0.604747 | 1.4:+70014495 | None:intergenic |
AATCACCCGTGTTGGAAGGG+AGG | 0.604837 | 1.4:-70010918 | MS.gene07236:CDS |
GCTGCAGGGGAAAGACTGAA+GGG | 0.605527 | 1.4:-70010733 | MS.gene07236:CDS |
TAGCCAAAGCAAATTTCCCA+AGG | 0.606062 | 1.4:-70014178 | MS.gene07236:CDS |
CGGGTCGAAGCTGCACATGT+TGG | 0.607232 | 1.4:-70014624 | MS.gene07236:CDS |
CACTACAAATGCATAGCAAG+GGG | 0.613137 | 1.4:+70014719 | None:intergenic |
TGGATATTCCTCGACCACCC+TGG | 0.613801 | 1.4:+70014553 | None:intergenic |
TATGTCCTGGACTGTAGCTA+CGG | 0.618293 | 1.4:+70014199 | None:intergenic |
CGTGACCCTTCTCATTATAG+GGG | 0.621306 | 1.4:-70014258 | MS.gene07236:CDS |
GAGGGAATATGATTCGAGGC+GGG | 0.630693 | 1.4:-70014298 | MS.gene07236:CDS |
GGAGACCTAGGCCTTGATTG+TGG | 0.631250 | 1.4:+70014078 | None:intergenic |
ATTAAGCTGTAGTATTACAA+AGG | 0.631925 | 1.4:+70010670 | None:intergenic |
GGATCACATGCGAAAAGCAG+GGG | 0.632074 | 1.4:-70014466 | MS.gene07236:CDS |
AATGGATAACCTTATAATGG+AGG | 0.633236 | 1.4:-70013608 | MS.gene07236:CDS |
CGACTCTTTGAAGTTTGACG+GGG | 0.633789 | 1.4:+70013000 | None:intergenic |
ATATCTAGCTTGAATCAGGT+GGG | 0.639643 | 1.4:-70013583 | MS.gene07236:CDS |
AGTTTGACGGGGACCCGTGG+TGG | 0.643416 | 1.4:+70013011 | None:intergenic |
TGTATTCTGTAGGACCACCA+CGG | 0.644372 | 1.4:-70013025 | MS.gene07236:intron |
TGAAGTGGAAGCCCTCATAG+AGG | 0.645724 | 1.4:-70010779 | MS.gene07236:CDS |
CCTTCCATCATGAACAACCT+GGG | 0.645797 | 1.4:+70014431 | None:intergenic |
CTGCAGGGGAAAGACTGAAG+GGG | 0.663521 | 1.4:-70010732 | MS.gene07236:CDS |
TGCCTCTATGAACTGTGACA+GGG | 0.664675 | 1.4:-70010890 | MS.gene07236:CDS |
AGCCAAAGCAAATTTCCCAA+GGG | 0.667784 | 1.4:-70014177 | MS.gene07236:CDS |
CGATACAGTATTCACAACAA+TGG | 0.667801 | 1.4:-70014576 | MS.gene07236:CDS |
TTGATCTAAAGGTTCCGCCA+AGG | 0.670359 | 1.4:-70014743 | MS.gene07236:CDS |
TCTAGCTTGAATCAGGTGGG+TGG | 0.677401 | 1.4:-70013580 | MS.gene07236:CDS |
TGGGTGGTTCTAATGAAACA+AGG | 0.684472 | 1.4:-70013564 | MS.gene07236:CDS |
TGAGGGAATATGATTCGAGG+CGG | 0.687368 | 1.4:-70014299 | MS.gene07236:CDS |
AGTATTCACAACAATGGCCA+GGG | 0.697356 | 1.4:-70014570 | MS.gene07236:CDS |
ATTCACAACAATGGCCAGGG+TGG | 0.724016 | 1.4:-70014567 | MS.gene07236:CDS |
ACTACAAATGCATAGCAAGG+GGG | 0.768168 | 1.4:+70014720 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTGTTTAATTATGATT+AGG | - | chr1.4:70012205-70012224 | MS.gene07236:intron | 10.0% |
!! | GAATTTAGTTAGAATAATAA+GGG | + | chr1.4:70013388-70013407 | None:intergenic | 15.0% |
!! | TAATTAAACAAATAACATCA+TGG | + | chr1.4:70012200-70012219 | None:intergenic | 15.0% |
!! | TAATTTCAAAACTTAGTATT+TGG | - | chr1.4:70011743-70011762 | MS.gene07236:intron | 15.0% |
!! | TAGATGTAAAATTACATAAA+AGG | + | chr1.4:70013808-70013827 | None:intergenic | 15.0% |
!! | TTTATTATATAAATGAACTC+TGG | + | chr1.4:70013780-70013799 | None:intergenic | 15.0% |
!!! | ACATGAAAATTGATTTTTTT+AGG | + | chr1.4:70013699-70013718 | None:intergenic | 15.0% |
!!! | GTTTTTGTTCTTTATATTTT+AGG | - | chr1.4:70014407-70014426 | MS.gene07236:CDS | 15.0% |
!!! | TGCTTTTAATTCATTTAATT+CGG | - | chr1.4:70012048-70012067 | MS.gene07236:intron | 15.0% |
!! | AAACATTTGTTTATGAAGTA+TGG | - | chr1.4:70010753-70010772 | MS.gene07236:CDS | 20.0% |
!! | GGAATTTAGTTAGAATAATA+AGG | + | chr1.4:70013389-70013408 | None:intergenic | 20.0% |
!! | TGAATTGACTAAATCTTATT+TGG | - | chr1.4:70012359-70012378 | MS.gene07236:intron | 20.0% |
!!! | ATTGATTTTTTTAGGAACTA+TGG | + | chr1.4:70013691-70013710 | None:intergenic | 20.0% |
!!! | TTGATTTTTTTAGGAACTAT+GGG | + | chr1.4:70013690-70013709 | None:intergenic | 20.0% |
!!! | TTTTTAGATGTCATATTTAC+TGG | - | chr1.4:70014496-70014515 | MS.gene07236:CDS | 20.0% |
! | AAAGCAGAAAAGATAAAAGA+AGG | + | chr1.4:70012034-70012053 | None:intergenic | 25.0% |
! | AAGCAGAAAAGATAAAAGAA+GGG | + | chr1.4:70012033-70012052 | None:intergenic | 25.0% |
! | AATTCATTTAATTCGGTTGT+TGG | - | chr1.4:70012055-70012074 | MS.gene07236:intron | 25.0% |
! | ACAAATAACATCATGGAATA+TGG | + | chr1.4:70012193-70012212 | None:intergenic | 25.0% |
! | AGCTGAATAAAAAAAATCTC+AGG | - | chr1.4:70014121-70014140 | MS.gene07236:CDS | 25.0% |
! | ATGAGAATAGCATTCAAATA+TGG | + | chr1.4:70014477-70014496 | None:intergenic | 25.0% |
! | CATATAAAACAGTATTGTAG+AGG | + | chr1.4:70012845-70012864 | None:intergenic | 25.0% |
! | GAAAAATCAAAGTCTTACAT+TGG | - | chr1.4:70012916-70012935 | MS.gene07236:intron | 25.0% |
! | GAAATGAAAGAGAAGATTAA+GGG | + | chr1.4:70013419-70013438 | None:intergenic | 25.0% |
! | GCTGAATAAAAAAAATCTCA+GGG | - | chr1.4:70014122-70014141 | MS.gene07236:CDS | 25.0% |
! | GTTGATATTAGTACAAATAC+TGG | - | chr1.4:70012229-70012248 | MS.gene07236:intron | 25.0% |
! | TAGAATAATAAGGGTAAAAC+TGG | + | chr1.4:70013379-70013398 | None:intergenic | 25.0% |
! | TCTACTACCATACAAAATTA+AGG | + | chr1.4:70011719-70011738 | None:intergenic | 25.0% |
! | TGAAATGAAAGAGAAGATTA+AGG | + | chr1.4:70013420-70013439 | None:intergenic | 25.0% |
! | TTCGCAAAGAAAGAAAAAAT+GGG | + | chr1.4:70013575-70013594 | None:intergenic | 25.0% |
!! | AATGTTTAACTTCTCTTTCA+CGG | + | chr1.4:70010740-70010759 | None:intergenic | 25.0% |
!! | ATCAAACATTTACTCTAAGA+TGG | - | chr1.4:70012877-70012896 | MS.gene07236:intron | 25.0% |
!! | CTCTACAATACTGTTTTATA+TGG | - | chr1.4:70012843-70012862 | MS.gene07236:intron | 25.0% |
!! | GTAATGGTTTGTGTTTATTT+CGG | - | chr1.4:70011869-70011888 | MS.gene07236:intron | 25.0% |
!! | TAATACCATCTTGTGTTTTT+GGG | + | chr1.4:70013022-70013041 | None:intergenic | 25.0% |
!! | TTATTTCTCATCATTTCAAC+TGG | + | chr1.4:70014216-70014235 | None:intergenic | 25.0% |
!! | TTTCTAGTAATATTTGACGT+TGG | - | chr1.4:70011625-70011644 | MS.gene07236:intron | 25.0% |
!!! | GATATTCTAAAATACTGTTC+AGG | + | chr1.4:70012154-70012173 | None:intergenic | 25.0% |
AAAAAACTCAATGCTCACAT+TGG | - | chr1.4:70013125-70013144 | MS.gene07236:intron | 30.0% | |
AACTTAGTTCATGGCTAATT+TGG | + | chr1.4:70013074-70013093 | None:intergenic | 30.0% | |
AAGATGGAGTGAAATAGTAT+TGG | - | chr1.4:70012893-70012912 | MS.gene07236:intron | 30.0% | |
AAGGATTGCTAATTTCATAG+AGG | - | chr1.4:70011988-70012007 | MS.gene07236:intron | 30.0% | |
AAGGCTTGAATAGAACTTAT+AGG | - | chr1.4:70013156-70013175 | MS.gene07236:intron | 30.0% | |
AAGTAGAGCTTATAAATCCT+TGG | - | chr1.4:70012954-70012973 | MS.gene07236:CDS | 30.0% | |
AAGTGTTATAGCATTCCATT+TGG | - | chr1.4:70012422-70012441 | MS.gene07236:intron | 30.0% | |
AATGGATAACCTTATAATGG+AGG | - | chr1.4:70011925-70011944 | MS.gene07236:intron | 30.0% | |
ACACTACTAAACTTAGTTCA+TGG | + | chr1.4:70013083-70013102 | None:intergenic | 30.0% | |
AGATGGAGTGAAATAGTATT+GGG | - | chr1.4:70012894-70012913 | MS.gene07236:intron | 30.0% | |
AGGATTTATAAGCTCTACTT+AGG | + | chr1.4:70012954-70012973 | None:intergenic | 30.0% | |
AGGCTTGAATAGAACTTATA+GGG | - | chr1.4:70013157-70013176 | MS.gene07236:intron | 30.0% | |
AGTCATATAAGGTAATACCA+GGG | + | chr1.4:70014050-70014069 | None:intergenic | 30.0% | |
ATAAAAAAAATCTCAGGGCA+AGG | - | chr1.4:70014127-70014146 | MS.gene07236:CDS | 30.0% | |
CAATTAGAGATCATACTCAT+GGG | - | chr1.4:70014522-70014541 | MS.gene07236:CDS | 30.0% | |
CAGAATGGATAACCTTATAA+TGG | - | chr1.4:70011922-70011941 | MS.gene07236:intron | 30.0% | |
CATTCTGTTTAACGTAAACA+CGG | + | chr1.4:70011909-70011928 | None:intergenic | 30.0% | |
CCATTACAATTTACAGCAAA+AGG | + | chr1.4:70011856-70011875 | None:intergenic | 30.0% | |
GAAAATAATTGGGATTGAGT+GGG | + | chr1.4:70013505-70013524 | None:intergenic | 30.0% | |
GAACTAAGTTTAGTAGTGTT+GGG | - | chr1.4:70013084-70013103 | MS.gene07236:intron | 30.0% | |
GATTGTTACTAGTAAAGATG+TGG | - | chr1.4:70011574-70011593 | MS.gene07236:intron | 30.0% | |
GGATATCCTATTTATAGTAG+AGG | - | chr1.4:70012777-70012796 | MS.gene07236:intron | 30.0% | |
GGTAAACCTCTACTATAAAT+AGG | + | chr1.4:70012786-70012805 | None:intergenic | 30.0% | |
GTAGCATGCTTATTATTACA+AGG | + | chr1.4:70014240-70014259 | None:intergenic | 30.0% | |
GTGTGACACTGAAAATAATT+GGG | + | chr1.4:70013515-70013534 | None:intergenic | 30.0% | |
GTTAGACTTTCAATTAGCAA+TGG | - | chr1.4:70014694-70014713 | MS.gene07236:CDS | 30.0% | |
GTTCGCAAAGAAAGAAAAAA+TGG | + | chr1.4:70013576-70013595 | None:intergenic | 30.0% | |
TAGATATAGCCTCCATTATA+AGG | + | chr1.4:70011937-70011956 | None:intergenic | 30.0% | |
TATGCTATCAAAAAGCTTGA+CGG | - | chr1.4:70011170-70011189 | MS.gene07236:intron | 30.0% | |
TATTGAATGAGATTGAAACG+TGG | - | chr1.4:70012756-70012775 | MS.gene07236:intron | 30.0% | |
TATTGTATGTTTGCATCAGA+TGG | + | chr1.4:70012636-70012655 | None:intergenic | 30.0% | |
TCAATTAGAGATCATACTCA+TGG | - | chr1.4:70014521-70014540 | MS.gene07236:CDS | 30.0% | |
TCTATCCTAGACACATTATT+GGG | - | chr1.4:70013045-70013064 | MS.gene07236:intron | 30.0% | |
TGAAAATAATTGGGATTGAG+TGG | + | chr1.4:70013506-70013525 | None:intergenic | 30.0% | |
TGAACTAAGTTTAGTAGTGT+TGG | - | chr1.4:70013083-70013102 | MS.gene07236:intron | 30.0% | |
TGTGTGACACTGAAAATAAT+TGG | + | chr1.4:70013516-70013535 | None:intergenic | 30.0% | |
TTACAATTTACAGCAAAAGG+AGG | + | chr1.4:70011853-70011872 | None:intergenic | 30.0% | |
TTACCAAATAAACCCAAACA+AGG | + | chr1.4:70011771-70011790 | None:intergenic | 30.0% | |
! | CTAATACCATCTTGTGTTTT+TGG | + | chr1.4:70013023-70013042 | None:intergenic | 30.0% |
! | CTTTACATCCCATATCTTTT+GGG | - | chr1.4:70012809-70012828 | MS.gene07236:intron | 30.0% |
! | GAAGTGTTTGGTAAAATTAG+CGG | + | chr1.4:70013843-70013862 | None:intergenic | 30.0% |
! | GTTTATTTGGTAATTGGTAG+TGG | - | chr1.4:70011778-70011797 | MS.gene07236:intron | 30.0% |
! | GTTTGGGTTTATTTGGTAAT+TGG | - | chr1.4:70011772-70011791 | MS.gene07236:intron | 30.0% |
! | TAGTATTTGGTTCCTTGTTT+GGG | - | chr1.4:70011756-70011775 | MS.gene07236:intron | 30.0% |
! | TATTTCAGGTGAAAAAGTAC+AGG | - | chr1.4:70014555-70014574 | MS.gene07236:CDS | 30.0% |
! | TCTTACATTGGCTAGAAATA+AGG | - | chr1.4:70012928-70012947 | MS.gene07236:intron | 30.0% |
! | TCTTTACATCCCATATCTTT+TGG | - | chr1.4:70012808-70012827 | MS.gene07236:intron | 30.0% |
! | TTAGTATTTGGTTCCTTGTT+TGG | - | chr1.4:70011755-70011774 | MS.gene07236:intron | 30.0% |
! | TTTGGCTAATTTGTAGGTTT+GGG | + | chr1.4:70014027-70014046 | None:intergenic | 30.0% |
!! | CCTTTTGCTGTAAATTGTAA+TGG | - | chr1.4:70011853-70011872 | MS.gene07236:intron | 30.0% |
!! | TGATGGACCTTAATTTTGTA+TGG | - | chr1.4:70011709-70011728 | MS.gene07236:intron | 30.0% |
!! | TGGGTTGAGTTTTATATTTC+AGG | - | chr1.4:70014541-70014560 | MS.gene07236:CDS | 30.0% |
AACACTACAAATGCATAGCA+AGG | + | chr1.4:70010819-70010838 | None:intergenic | 35.0% | |
AAGATATGGGATGTAAAGAC+AGG | + | chr1.4:70012807-70012826 | None:intergenic | 35.0% | |
AAGCCAAGATTTACCATCTT+TGG | + | chr1.4:70014837-70014856 | None:intergenic | 35.0% | |
AAGCTAGAAGCTCATTTATG+TGG | + | chr1.4:70013196-70013215 | None:intergenic | 35.0% | |
AATGCTAGAAGATGATGAAG+AGG | + | chr1.4:70013641-70013660 | None:intergenic | 35.0% | |
ACACTACAAATGCATAGCAA+GGG | + | chr1.4:70010818-70010837 | None:intergenic | 35.0% | |
ACTAGTAAAGATGTGGATGA+TGG | - | chr1.4:70011581-70011600 | MS.gene07236:intron | 35.0% | |
AGCCAAGATTTACCATCTTT+GGG | + | chr1.4:70014836-70014855 | None:intergenic | 35.0% | |
ATCCCAAAGATGGTAAATCT+TGG | - | chr1.4:70014831-70014850 | MS.gene07236:CDS | 35.0% | |
ATCTAGTGGAAAACTGATCA+AGG | - | chr1.4:70012582-70012601 | MS.gene07236:intron | 35.0% | |
CAAGATGCACTAAGATTTCA+AGG | + | chr1.4:70012278-70012297 | None:intergenic | 35.0% | |
CAGTCATATAAGGTAATACC+AGG | + | chr1.4:70014051-70014070 | None:intergenic | 35.0% | |
CGATACAGTATTCACAACAA+TGG | - | chr1.4:70010957-70010976 | MS.gene07236:CDS | 35.0% | |
CGTGTTTACGTTAAACAGAA+TGG | - | chr1.4:70011907-70011926 | MS.gene07236:intron | 35.0% | |
CTCTTTCATTTCACGTTTCT+GGG | - | chr1.4:70013427-70013446 | MS.gene07236:intron | 35.0% | |
CTTTATCAAGACCACAATCA+AGG | - | chr1.4:70011444-70011463 | MS.gene07236:intron | 35.0% | |
GAATATCGTGTTCTAGTCAA+TGG | - | chr1.4:70011011-70011030 | MS.gene07236:intron | 35.0% | |
GACTGACATACAGTCATATA+AGG | + | chr1.4:70014061-70014080 | None:intergenic | 35.0% | |
GAGAAGATTAAGGGCAAAAA+TGG | + | chr1.4:70013410-70013429 | None:intergenic | 35.0% | |
GCTCTGTTTGGTAAAAATAG+CGG | + | chr1.4:70013950-70013969 | None:intergenic | 35.0% | |
GTCTATCCTAGACACATTAT+TGG | - | chr1.4:70013044-70013063 | MS.gene07236:intron | 35.0% | |
GTTATAGCATTCCATTTGGT+TGG | - | chr1.4:70012426-70012445 | MS.gene07236:intron | 35.0% | |
TAAAGAACAGGATCTAGATC+TGG | + | chr1.4:70011429-70011448 | None:intergenic | 35.0% | |
TAGAACTTATAGGGTCTGTT+TGG | - | chr1.4:70013166-70013185 | MS.gene07236:intron | 35.0% | |
TATAAGGTAATACCAGGGTT+TGG | + | chr1.4:70014045-70014064 | None:intergenic | 35.0% | |
TCTCTTTCATTTCACGTTTC+TGG | - | chr1.4:70013426-70013445 | MS.gene07236:intron | 35.0% | |
TGAAGATTGCCTAGACATTA+TGG | + | chr1.4:70013972-70013991 | None:intergenic | 35.0% | |
TGGCTGAGAAACACTTATTT+GGG | - | chr1.4:70011645-70011664 | MS.gene07236:intron | 35.0% | |
TTAGTTCATGGCTAATTTGG+TGG | + | chr1.4:70013071-70013090 | None:intergenic | 35.0% | |
TTATAAGCTCAAACGCTACT+TGG | + | chr1.4:70013333-70013352 | None:intergenic | 35.0% | |
TTCACCACTTTGTATTCTGT+AGG | - | chr1.4:70012498-70012517 | MS.gene07236:intron | 35.0% | |
TTCAGCTATTACTCCATATC+TGG | + | chr1.4:70014108-70014127 | None:intergenic | 35.0% | |
TTCTTCCCCTATAATGAGAA+GGG | + | chr1.4:70011283-70011302 | None:intergenic | 35.0% | |
TTGGCTGAGAAACACTTATT+TGG | - | chr1.4:70011644-70011663 | MS.gene07236:intron | 35.0% | |
! | ATATCTAGCTTGAATCAGGT+GGG | - | chr1.4:70011950-70011969 | MS.gene07236:intron | 35.0% |
! | ATGGTTTGTGTTTATTTCGG+CGG | - | chr1.4:70011872-70011891 | MS.gene07236:intron | 35.0% |
! | CATAACTCGCATTGATCTAA+AGG | - | chr1.4:70010779-70010798 | MS.gene07236:CDS | 35.0% |
! | CTTTTATTACGCAGAGGTAA+TGG | + | chr1.4:70011479-70011498 | None:intergenic | 35.0% |
! | GATAAGCTAGTTGAAGTGTT+TGG | + | chr1.4:70013855-70013874 | None:intergenic | 35.0% |
! | GTTCCTTGTTTGGGTTTATT+TGG | - | chr1.4:70011765-70011784 | MS.gene07236:intron | 35.0% |
! | GTTTGGCTAATTTGTAGGTT+TGG | + | chr1.4:70014028-70014047 | None:intergenic | 35.0% |
! | TATATCTAGCTTGAATCAGG+TGG | - | chr1.4:70011949-70011968 | MS.gene07236:intron | 35.0% |
! | TCTATCCTATGGGTTAATGT+AGG | - | chr1.4:70012725-70012744 | MS.gene07236:intron | 35.0% |
! | TGTGATGGCTATGATTTTGA+TGG | - | chr1.4:70010876-70010895 | MS.gene07236:CDS | 35.0% |
! | TTGACAAAAGTAGCTCTGTT+TGG | - | chr1.4:70013240-70013259 | MS.gene07236:intron | 35.0% |
! | TTGGCTAATTTGTAGGTTTG+GGG | + | chr1.4:70014026-70014045 | None:intergenic | 35.0% |
! | TTGTGGTCTTGATAAAGAAC+AGG | + | chr1.4:70011441-70011460 | None:intergenic | 35.0% |
! | TTTTGTCCAATCACTAGTGT+GGG | - | chr1.4:70012685-70012704 | MS.gene07236:intron | 35.0% |
! | TTTTTGTCCAATCACTAGTG+TGG | - | chr1.4:70012684-70012703 | MS.gene07236:intron | 35.0% |
!! | ATCATCTTCTAGCATTGACA+AGG | - | chr1.4:70013645-70013664 | MS.gene07236:intron | 35.0% |
!! | ATTTTGATGGGTGCCAATTA+CGG | - | chr1.4:70010889-70010908 | MS.gene07236:CDS | 35.0% |
!! | GTGATGGCTATGATTTTGAT+GGG | - | chr1.4:70010877-70010896 | MS.gene07236:CDS | 35.0% |
!! | TAGAGAAGTATCCAACCAAA+TGG | + | chr1.4:70012440-70012459 | None:intergenic | 35.0% |
!! | TCATCTTCTAGCATTGACAA+GGG | - | chr1.4:70013646-70013665 | MS.gene07236:intron | 35.0% |
AAAATCTCAGGGCAAGGATT+TGG | - | chr1.4:70014133-70014152 | MS.gene07236:CDS | 40.0% | |
AACACGATATTCAGAGTGAC+TGG | + | chr1.4:70011003-70011022 | None:intergenic | 40.0% | |
AACCCACTCCCAAAAGATAT+GGG | + | chr1.4:70012820-70012839 | None:intergenic | 40.0% | |
AAGGTCCATCAAATTCCTCA+AGG | + | chr1.4:70011700-70011719 | None:intergenic | 40.0% | |
AATAATTGGGATTGAGTGGG+TGG | + | chr1.4:70013502-70013521 | None:intergenic | 40.0% | |
AATGCTGACGATGCAATTTG+TGG | - | chr1.4:70010852-70010871 | MS.gene07236:CDS | 40.0% | |
ACTACAAATGCATAGCAAGG+GGG | + | chr1.4:70010816-70010835 | None:intergenic | 40.0% | |
AGCCAAAGCAAATTTCCCAA+GGG | - | chr1.4:70011356-70011375 | MS.gene07236:intron | 40.0% | |
AGTAACAATCAGAGCTTACC+TGG | + | chr1.4:70011564-70011583 | None:intergenic | 40.0% | |
AGTATTCACAACAATGGCCA+GGG | - | chr1.4:70010963-70010982 | MS.gene07236:CDS | 40.0% | |
ATGCTGACGATGCAATTTGT+GGG | - | chr1.4:70010853-70010872 | MS.gene07236:CDS | 40.0% | |
CAAACAGAGCCATAATGTCT+AGG | - | chr1.4:70013960-70013979 | MS.gene07236:intron | 40.0% | |
CACAACTCACTCTATCCTAT+GGG | - | chr1.4:70012715-70012734 | MS.gene07236:intron | 40.0% | |
CACTACAAATGCATAGCAAG+GGG | + | chr1.4:70010817-70010836 | None:intergenic | 40.0% | |
CTTCTTCCCCTATAATGAGA+AGG | + | chr1.4:70011284-70011303 | None:intergenic | 40.0% | |
GAACGAGAAACTAATCTTGC+TGG | + | chr1.4:70011401-70011420 | None:intergenic | 40.0% | |
TAGCCAAAGCAAATTTCCCA+AGG | - | chr1.4:70011355-70011374 | MS.gene07236:intron | 40.0% | |
TCACAACTCACTCTATCCTA+TGG | - | chr1.4:70012714-70012733 | MS.gene07236:intron | 40.0% | |
TCGTGACCCTTCTCATTATA+GGG | - | chr1.4:70011274-70011293 | MS.gene07236:intron | 40.0% | |
TCTCATCATTTCAACTGGAC+AGG | + | chr1.4:70014211-70014230 | None:intergenic | 40.0% | |
TGAGCAGAACTGTCTATGTT+GGG | - | chr1.4:70010697-70010716 | MS.gene07236:CDS | 40.0% | |
TGGTCCTACAGAATACAAAG+TGG | + | chr1.4:70012505-70012524 | None:intergenic | 40.0% | |
TGTATGTCAGTCTGAGTTTG+CGG | - | chr1.4:70014069-70014088 | MS.gene07236:CDS | 40.0% | |
TTAGGCCTTGAGGAATTTGA+TGG | - | chr1.4:70011692-70011711 | MS.gene07236:intron | 40.0% | |
TTGAGCAGAACTGTCTATGT+TGG | - | chr1.4:70010696-70010715 | MS.gene07236:CDS | 40.0% | |
! | AAGATGTGGATGATGGTTAG+TGG | - | chr1.4:70011588-70011607 | MS.gene07236:intron | 40.0% |
! | AATTTGCTTTGGCTATGTCC+TGG | + | chr1.4:70011350-70011369 | None:intergenic | 40.0% |
! | CTAGACATTATGGCTCTGTT+TGG | + | chr1.4:70013962-70013981 | None:intergenic | 40.0% |
! | GGCTATATCTAGCTTGAATC+AGG | - | chr1.4:70011946-70011965 | MS.gene07236:intron | 40.0% |
! | TACCCTTGGGAAATTTGCTT+TGG | + | chr1.4:70011361-70011380 | None:intergenic | 40.0% |
! | TTTTCCCAGGTTGTTCATGA+TGG | - | chr1.4:70011098-70011117 | MS.gene07236:intron | 40.0% |
!! | AGCGACTCTTTGAAGTTTGA+CGG | + | chr1.4:70012538-70012557 | None:intergenic | 40.0% |
!! | ATCCCATATCTTTTGGGAGT+GGG | - | chr1.4:70012815-70012834 | MS.gene07236:intron | 40.0% |
!! | TGGGTGGTTCTAATGAAACA+AGG | - | chr1.4:70011969-70011988 | MS.gene07236:intron | 40.0% |
!! | TTTTGATGGGTGCCAATTAC+GGG | - | chr1.4:70010890-70010909 | MS.gene07236:CDS | 40.0% |
AAGCTTATGTAGCAGCTGCA+GGG | - | chr1.4:70014786-70014805 | MS.gene07236:CDS | 45.0% | |
AAGGATCACATGCGAAAAGC+AGG | - | chr1.4:70011065-70011084 | MS.gene07236:intron | 45.0% | |
ACCTGGACAAACTCTTGCTA+CGG | + | chr1.4:70011547-70011566 | None:intergenic | 45.0% | |
ACGTTGTGAGGATTTACCCT+TGG | + | chr1.4:70011375-70011394 | None:intergenic | 45.0% | |
AGGATCACATGCGAAAAGCA+GGG | - | chr1.4:70011066-70011085 | MS.gene07236:intron | 45.0% | |
AGTGGAAATTGGGCCAGATA+TGG | - | chr1.4:70014092-70014111 | MS.gene07236:CDS | 45.0% | |
ATCCCTGTCACAGTTCATAG+AGG | + | chr1.4:70014648-70014667 | None:intergenic | 45.0% | |
ATGCCTCTATGAACTGTGAC+AGG | - | chr1.4:70014642-70014661 | MS.gene07236:CDS | 45.0% | |
CAGTATTCACAACAATGGCC+AGG | - | chr1.4:70010962-70010981 | MS.gene07236:CDS | 45.0% | |
CCAAAGAAGAACGTGTGTGT+TGG | - | chr1.4:70013729-70013748 | MS.gene07236:intron | 45.0% | |
CCAACACACACGTTCTTCTT+TGG | + | chr1.4:70013732-70013751 | None:intergenic | 45.0% | |
CCTACAAATTAGCCAAACCC+TGG | - | chr1.4:70014030-70014049 | MS.gene07236:CDS | 45.0% | |
CCTTCCATCATGAACAACCT+GGG | + | chr1.4:70011105-70011124 | None:intergenic | 45.0% | |
CGTGACCCTTCTCATTATAG+GGG | - | chr1.4:70011275-70011294 | MS.gene07236:intron | 45.0% | |
CGTTGTGAGGATTTACCCTT+GGG | + | chr1.4:70011374-70011393 | None:intergenic | 45.0% | |
CTCCACCAAACCAACTTCTA+AGG | + | chr1.4:70012989-70013008 | None:intergenic | 45.0% | |
CTGAAGTCTCTCACATCTAG+TGG | - | chr1.4:70012568-70012587 | MS.gene07236:intron | 45.0% | |
CTTAGTGCATCTTGAGCCTT+AGG | - | chr1.4:70012284-70012303 | MS.gene07236:intron | 45.0% | |
CTTTCTGGATATGCTGAGGT+AGG | + | chr1.4:70014587-70014606 | None:intergenic | 45.0% | |
GAACCCACTCCCAAAAGATA+TGG | + | chr1.4:70012821-70012840 | None:intergenic | 45.0% | |
GAGTTTGCGGAGTGGAAATT+GGG | - | chr1.4:70014082-70014101 | MS.gene07236:CDS | 45.0% | |
GATGCAATTTGTGGGTGTGA+TGG | - | chr1.4:70010861-70010880 | MS.gene07236:CDS | 45.0% | |
GCAATCCTCACCTTAGAAGT+TGG | - | chr1.4:70012976-70012995 | MS.gene07236:CDS | 45.0% | |
GCATGTGATCCTTAAGATCC+TGG | + | chr1.4:70011058-70011077 | None:intergenic | 45.0% | |
GCTCACATTGGTGTGAGATA+AGG | - | chr1.4:70013137-70013156 | MS.gene07236:intron | 45.0% | |
GGATTTGGAGAGAGACTGAA+AGG | - | chr1.4:70014148-70014167 | MS.gene07236:CDS | 45.0% | |
GGGAGAAACAATCCCAAAGA+TGG | - | chr1.4:70014821-70014840 | MS.gene07236:CDS | 45.0% | |
GGTGATTGTCTTGCTCTTTC+TGG | + | chr1.4:70014602-70014621 | None:intergenic | 45.0% | |
GTCGTGACCCTTCTCATTAT+AGG | - | chr1.4:70011273-70011292 | MS.gene07236:intron | 45.0% | |
GTCTATGTTGGGAATCTACC+TGG | - | chr1.4:70010708-70010727 | MS.gene07236:CDS | 45.0% | |
GTGCTCCTACATTAACCCAT+AGG | + | chr1.4:70012733-70012752 | None:intergenic | 45.0% | |
GTGTGAGGGAATATGATTCG+AGG | - | chr1.4:70011231-70011250 | MS.gene07236:intron | 45.0% | |
TATGTCCTGGACTGTAGCTA+CGG | + | chr1.4:70011337-70011356 | None:intergenic | 45.0% | |
TCAGGCCCAAAAACACAAGA+TGG | - | chr1.4:70013014-70013033 | MS.gene07236:CDS | 45.0% | |
TGAGGGAATATGATTCGAGG+CGG | - | chr1.4:70011234-70011253 | MS.gene07236:intron | 45.0% | |
TGAGTTTGCGGAGTGGAAAT+TGG | - | chr1.4:70014081-70014100 | MS.gene07236:CDS | 45.0% | |
TGCCTCTATGAACTGTGACA+GGG | - | chr1.4:70014643-70014662 | MS.gene07236:CDS | 45.0% | |
TGCTCTTTCTGGATATGCTG+AGG | + | chr1.4:70014591-70014610 | None:intergenic | 45.0% | |
TGTATTCTGTAGGACCACCA+CGG | - | chr1.4:70012508-70012527 | MS.gene07236:intron | 45.0% | |
TTCTGCAGCTTCCTCTATGA+GGG | + | chr1.4:70014768-70014787 | None:intergenic | 45.0% | |
TTGATCTAAAGGTTCCGCCA+AGG | - | chr1.4:70010790-70010809 | MS.gene07236:CDS | 45.0% | |
! | AGCGACATTTGAAGCACCTA+AGG | + | chr1.4:70012303-70012322 | None:intergenic | 45.0% |
! | ATGATGGAAGGGCTACTACT+GGG | - | chr1.4:70011114-70011133 | MS.gene07236:intron | 45.0% |
! | CCAGGGTTTGGCTAATTTGT+AGG | + | chr1.4:70014033-70014052 | None:intergenic | 45.0% |
! | CCAGGTTGTTCATGATGGAA+GGG | - | chr1.4:70011103-70011122 | MS.gene07236:intron | 45.0% |
! | CCTCACCTTAGAAGTTGGTT+TGG | - | chr1.4:70012981-70013000 | MS.gene07236:CDS | 45.0% |
! | TTGGGGCTTTTATTACGCAG+AGG | + | chr1.4:70011485-70011504 | None:intergenic | 45.0% |
!! | AAGACCTGGAAAAAGCGTTC+CGG | + | chr1.4:70011205-70011224 | None:intergenic | 45.0% |
!! | CACCTTAGAAGTTGGTTTGG+TGG | - | chr1.4:70012984-70013003 | MS.gene07236:CDS | 45.0% |
!! | CATCCCATATCTTTTGGGAG+TGG | - | chr1.4:70012814-70012833 | MS.gene07236:intron | 45.0% |
!! | CCAAACCAACTTCTAAGGTG+AGG | + | chr1.4:70012984-70013003 | None:intergenic | 45.0% |
!! | CGACTCTTTGAAGTTTGACG+GGG | + | chr1.4:70012536-70012555 | None:intergenic | 45.0% |
!! | CTGCTAGCACTGTGCTTTTT+GGG | + | chr1.4:70011503-70011522 | None:intergenic | 45.0% |
!! | GCGACTCTTTGAAGTTTGAC+GGG | + | chr1.4:70012537-70012556 | None:intergenic | 45.0% |
!! | TGCTAGCACTGTGCTTTTTG+GGG | + | chr1.4:70011502-70011521 | None:intergenic | 45.0% |
!! | TGGTTTGGTGGAGTTGAATC+AGG | - | chr1.4:70012996-70013015 | MS.gene07236:CDS | 45.0% |
!! | TGTTGCTTTGATACAGCTGC+TGG | - | chr1.4:70014284-70014303 | MS.gene07236:CDS | 45.0% |
!! | TTCTAAGGTGAGGATTGCCA+AGG | + | chr1.4:70012974-70012993 | None:intergenic | 45.0% |
!!! | GGTGCTTCAAATGTCGCTTT+TGG | - | chr1.4:70012305-70012324 | MS.gene07236:intron | 45.0% |
AAGGGCTACTACTGGGATTG+TGG | - | chr1.4:70011121-70011140 | MS.gene07236:intron | 50.0% | |
AATGTCCGTGTCTGCACAAG+AGG | - | chr1.4:70014718-70014737 | MS.gene07236:CDS | 50.0% | |
AGACAATCACCCGTGTTGGA+AGG | - | chr1.4:70014611-70014630 | MS.gene07236:CDS | 50.0% | |
AGCAAGACAATCACCCGTGT+TGG | - | chr1.4:70014607-70014626 | MS.gene07236:CDS | 50.0% | |
AGCTTATGTAGCAGCTGCAG+GGG | - | chr1.4:70014787-70014806 | MS.gene07236:CDS | 50.0% | |
ATTCACAACAATGGCCAGGG+TGG | - | chr1.4:70010966-70010985 | MS.gene07236:CDS | 50.0% | |
ATTCTGCCTCCCTTCCAACA+CGG | + | chr1.4:70014624-70014643 | None:intergenic | 50.0% | |
CAAGACCACAATCAAGGCCT+AGG | - | chr1.4:70011450-70011469 | MS.gene07236:intron | 50.0% | |
CAGGTCTTACGTTCGTGTGA+GGG | - | chr1.4:70011217-70011236 | MS.gene07236:intron | 50.0% | |
CCCTTCCATCATGAACAACC+TGG | + | chr1.4:70011106-70011125 | None:intergenic | 50.0% | |
CTTCTGCAGCTTCCTCTATG+AGG | + | chr1.4:70014769-70014788 | None:intergenic | 50.0% | |
GAAGCTTATGTAGCAGCTGC+AGG | - | chr1.4:70014785-70014804 | MS.gene07236:CDS | 50.0% | |
GACAATCACCCGTGTTGGAA+GGG | - | chr1.4:70014612-70014631 | MS.gene07236:CDS | 50.0% | |
GAGGGAATATGATTCGAGGC+GGG | - | chr1.4:70011235-70011254 | MS.gene07236:intron | 50.0% | |
GGATCACATGCGAAAAGCAG+GGG | - | chr1.4:70011067-70011086 | MS.gene07236:intron | 50.0% | |
GGCTTCCACTTCAGCAAATG+TGG | + | chr1.4:70014747-70014766 | None:intergenic | 50.0% | |
GGTGGCCCAATAATGTGTCT+AGG | + | chr1.4:70013053-70013072 | None:intergenic | 50.0% | |
GTATTCTGTAGGACCACCAC+GGG | - | chr1.4:70012509-70012528 | MS.gene07236:intron | 50.0% | |
GTGATCCTTAAGATCCTGGC+AGG | + | chr1.4:70011054-70011073 | None:intergenic | 50.0% | |
TCTCTTTCACGGATATCGCC+AGG | + | chr1.4:70010729-70010748 | None:intergenic | 50.0% | |
TCTTGCTGGTGAACGTTGTG+AGG | + | chr1.4:70011387-70011406 | None:intergenic | 50.0% | |
TGAAGTGGAAGCCCTCATAG+AGG | - | chr1.4:70014754-70014773 | MS.gene07236:CDS | 50.0% | |
TGCATCCTGCCAGGATCTTA+AGG | - | chr1.4:70011046-70011065 | MS.gene07236:intron | 50.0% | |
! | ACAGCTGCTGGTTGTGAGTT+TGG | - | chr1.4:70014296-70014315 | MS.gene07236:CDS | 50.0% |
! | ACCTTGCAAGTCGCTTTGTG+GGG | - | chr1.4:70013991-70014010 | MS.gene07236:CDS | 50.0% |
! | CACCTTGCAAGTCGCTTTGT+GGG | - | chr1.4:70013990-70014009 | MS.gene07236:intron | 50.0% |
! | CAGCTGCTGGTTGTGAGTTT+GGG | - | chr1.4:70014297-70014316 | MS.gene07236:CDS | 50.0% |
! | CATGATGGAAGGGCTACTAC+TGG | - | chr1.4:70011113-70011132 | MS.gene07236:intron | 50.0% |
! | CCAAAAAGCACAGTGCTAGC+AGG | - | chr1.4:70011501-70011520 | MS.gene07236:intron | 50.0% |
! | CCCAGGTTGTTCATGATGGA+AGG | - | chr1.4:70011102-70011121 | MS.gene07236:intron | 50.0% |
! | CCTGCTAGCACTGTGCTTTT+TGG | + | chr1.4:70011504-70011523 | None:intergenic | 50.0% |
! | TCACCTTGCAAGTCGCTTTG+TGG | - | chr1.4:70013989-70014008 | MS.gene07236:intron | 50.0% |
! | TCTAGCTTGAATCAGGTGGG+TGG | - | chr1.4:70011953-70011972 | MS.gene07236:intron | 50.0% |
!! | AGGGGATGTTTGCTTTTCCC+AGG | - | chr1.4:70011085-70011104 | MS.gene07236:intron | 50.0% |
!!! | AGTTCCGGAACGCTTTTTCC+AGG | - | chr1.4:70011198-70011217 | MS.gene07236:intron | 50.0% |
AATCACCCGTGTTGGAAGGG+AGG | - | chr1.4:70014615-70014634 | MS.gene07236:CDS | 55.0% | |
AATGCATAGCAAGGGGGCCT+TGG | + | chr1.4:70010810-70010829 | None:intergenic | 55.0% | |
ACCCCACAAAGCGACTTGCA+AGG | + | chr1.4:70013995-70014014 | None:intergenic | 55.0% | |
AGCTGCAGGGGAAAGACTGA+AGG | - | chr1.4:70014799-70014818 | MS.gene07236:CDS | 55.0% | |
ATCCTGGCAGGATGCAGAAG+AGG | + | chr1.4:70011042-70011061 | None:intergenic | 55.0% | |
CCAGGTCTTACGTTCGTGTG+AGG | - | chr1.4:70011216-70011235 | MS.gene07236:intron | 55.0% | |
CCTCACACGAACGTAAGACC+TGG | + | chr1.4:70011219-70011238 | None:intergenic | 55.0% | |
CGTGCACCCACACTAGTGAT+TGG | + | chr1.4:70012694-70012713 | None:intergenic | 55.0% | |
CTGCAGGGGAAAGACTGAAG+GGG | - | chr1.4:70014801-70014820 | MS.gene07236:CDS | 55.0% | |
CTTCTGCCTCTGGGCATCTT+AGG | - | chr1.4:70011674-70011693 | MS.gene07236:intron | 55.0% | |
GCCGTAGCAAGAGTTTGTCC+AGG | - | chr1.4:70011543-70011562 | MS.gene07236:intron | 55.0% | |
GCTGCAGGGGAAAGACTGAA+GGG | - | chr1.4:70014800-70014819 | MS.gene07236:CDS | 55.0% | |
GGAGACCTAGGCCTTGATTG+TGG | + | chr1.4:70011458-70011477 | None:intergenic | 55.0% | |
GGGTTGAGACTTCTGCCTCT+GGG | - | chr1.4:70011665-70011684 | MS.gene07236:intron | 55.0% | |
GTCAGTCTGAGTTTGCGGAG+TGG | - | chr1.4:70014074-70014093 | MS.gene07236:CDS | 55.0% | |
GTGCAGCTTCGACCCGTAAT+TGG | + | chr1.4:70010905-70010924 | None:intergenic | 55.0% | |
GTGCTAGCAGGAGTCCAAGT+AGG | - | chr1.4:70011513-70011532 | MS.gene07236:intron | 55.0% | |
TCAAGGCCTAAGATGCCCAG+AGG | + | chr1.4:70011683-70011702 | None:intergenic | 55.0% | |
TCCTGGCAGGATGCAGAAGA+GGG | + | chr1.4:70011041-70011060 | None:intergenic | 55.0% | |
TCTGGGCATCTTAGGCCTTG+AGG | - | chr1.4:70011682-70011701 | MS.gene07236:intron | 55.0% | |
TGGATATTCCTCGACCACCC+TGG | + | chr1.4:70010983-70011002 | None:intergenic | 55.0% | |
TTCTGCCTCCCTTCCAACAC+GGG | + | chr1.4:70014623-70014642 | None:intergenic | 55.0% | |
TTGGGATTGAGTGGGTGGAC+TGG | + | chr1.4:70013497-70013516 | None:intergenic | 55.0% | |
! | AGGCGGGACTCTAGAAGTCT+TGG | - | chr1.4:70011251-70011270 | MS.gene07236:intron | 55.0% |
! | GGCAGCCACATTTGCTGAAG+TGG | - | chr1.4:70014739-70014758 | MS.gene07236:CDS | 55.0% |
! | TAGTAGTGTTGGGCGTGAGC+AGG | - | chr1.4:70013094-70013113 | MS.gene07236:intron | 55.0% |
! | TGCAAGTCGCTTTGTGGGGT+CGG | - | chr1.4:70013995-70014014 | MS.gene07236:CDS | 55.0% |
! | TGGGTTGAGACTTCTGCCTC+TGG | - | chr1.4:70011664-70011683 | MS.gene07236:intron | 55.0% |
!! | AGCTTGACGGCTCTGAGTTC+CGG | - | chr1.4:70011183-70011202 | MS.gene07236:intron | 55.0% |
!! | CGCAGAGGTAATGGAGACCT+AGG | + | chr1.4:70011470-70011489 | None:intergenic | 55.0% |
AACAATGGCCAGGGTGGTCG+AGG | - | chr1.4:70010972-70010991 | MS.gene07236:CDS | 60.0% | |
CGGGTCGAAGCTGCACATGT+TGG | - | chr1.4:70010909-70010928 | MS.gene07236:CDS | 60.0% | |
CTACGGCTCCTGCTCCTACT+TGG | + | chr1.4:70011530-70011549 | None:intergenic | 60.0% | |
CTGGACTGTAGCTACGGCTG+CGG | + | chr1.4:70011331-70011350 | None:intergenic | 60.0% | |
GAAGATATAGCCGCAGCCGC+AGG | - | chr1.4:70011300-70011319 | MS.gene07236:intron | 60.0% | |
GCAGGAGTCCAAGTAGGAGC+AGG | - | chr1.4:70011519-70011538 | MS.gene07236:intron | 60.0% | |
GGCTGCCTCTTGTGCAGACA+CGG | + | chr1.4:70014726-70014745 | None:intergenic | 60.0% | |
TGAAGTTTGACGGGGACCCG+TGG | + | chr1.4:70012528-70012547 | None:intergenic | 60.0% | |
! | GCAAGTCGCTTTGTGGGGTC+GGG | - | chr1.4:70013996-70014015 | MS.gene07236:CDS | 60.0% |
!! | GGATTGAGTGGGTGGACTGG+TGG | + | chr1.4:70013494-70013513 | None:intergenic | 60.0% |
AGTTTGACGGGGACCCGTGG+TGG | + | chr1.4:70012525-70012544 | None:intergenic | 65.0% | |
CGCAGCCGTAGCTACAGTCC+AGG | - | chr1.4:70011329-70011348 | MS.gene07236:intron | 65.0% | |
GCATAGCAAGGGGGCCTTGG+CGG | + | chr1.4:70010807-70010826 | None:intergenic | 65.0% | |
GCCCTCTTCTGCATCCTGCC+AGG | - | chr1.4:70011037-70011056 | MS.gene07236:intron | 65.0% | |
! | GTCGCTTTGTGGGGTCGGGT+CGG | - | chr1.4:70014000-70014019 | MS.gene07236:CDS | 65.0% |
TACGGCTGCGGCTGCACCTG+CGG | + | chr1.4:70011319-70011338 | None:intergenic | 70.0% | |
TGCGGCTGCACCTGCGGCTG+CGG | + | chr1.4:70011313-70011332 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 70010684 | 70014871 | 70010684 | ID=MS.gene07236 |
chr1.4 | mRNA | 70010684 | 70014871 | 70010684 | ID=MS.gene07236.t1;Parent=MS.gene07236 |
chr1.4 | exon | 70013991 | 70014871 | 70013991 | ID=MS.gene07236.t1.exon1;Parent=MS.gene07236.t1 |
chr1.4 | CDS | 70013991 | 70014871 | 70013991 | ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1 |
chr1.4 | exon | 70013546 | 70013630 | 70013546 | ID=MS.gene07236.t1.exon2;Parent=MS.gene07236.t1 |
chr1.4 | CDS | 70013546 | 70013630 | 70013546 | ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1 |
chr1.4 | exon | 70012952 | 70013035 | 70012952 | ID=MS.gene07236.t1.exon3;Parent=MS.gene07236.t1 |
chr1.4 | CDS | 70012952 | 70013035 | 70012952 | ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1 |
chr1.4 | exon | 70010684 | 70010992 | 70010684 | ID=MS.gene07236.t1.exon4;Parent=MS.gene07236.t1 |
chr1.4 | CDS | 70010684 | 70010992 | 70010684 | ID=cds.MS.gene07236.t1;Parent=MS.gene07236.t1 |
Gene Sequence |
Protein sequence |