Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064162.t1 | XP_003609850.1 | 95.3 | 301 | 13 | 1 | 1 | 301 | 1 | 300 | 3.30E-168 | 600.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064162.t1 | G7JQ18 | 95.3 | 301 | 13 | 1 | 1 | 301 | 1 | 300 | 2.3e-168 | 600.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene064162 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene049660 | MS.gene064162 | 0.840419 | 8.80E-58 | -1.69E-46 |
| MS.gene049989 | MS.gene064162 | 0.84892 | 4.51E-60 | -1.69E-46 |
| MS.gene050297 | MS.gene064162 | 0.862401 | 5.20E-64 | -1.69E-46 |
| MS.gene05054 | MS.gene064162 | 0.837779 | 4.25E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene064162 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene064162 | 0.823346 | 1.46E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene064162 | 0.826819 | 2.20E-54 | -1.69E-46 |
| MS.gene053538 | MS.gene064162 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene054999 | MS.gene064162 | 0.834189 | 3.46E-56 | -1.69E-46 |
| MS.gene055251 | MS.gene064162 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene064162 | 0.805037 | 1.62E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene064162 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene056266 | MS.gene064162 | -0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene056526 | MS.gene064162 | 0.823935 | 1.06E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene064162 | 0.81787 | 2.63E-52 | -1.69E-46 |
| MS.gene058196 | MS.gene064162 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene064162 | 0.821429 | 4.06E-53 | -1.69E-46 |
| MS.gene058198 | MS.gene064162 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene05866 | MS.gene064162 | 0.8052 | 1.50E-49 | -1.69E-46 |
| MS.gene059300 | MS.gene064162 | 0.844592 | 6.87E-59 | -1.69E-46 |
| MS.gene060473 | MS.gene064162 | 0.828021 | 1.13E-54 | -1.69E-46 |
| MS.gene060565 | MS.gene064162 | 0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene06057 | MS.gene064162 | 0.836165 | 1.10E-56 | -1.69E-46 |
| MS.gene061099 | MS.gene064162 | 0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene064162 | 0.821602 | 3.70E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064162.t1 | MTR_4g123700 | 95.349 | 301 | 13 | 1 | 1 | 301 | 1 | 300 | 0.0 | 553 |
| MS.gene064162.t1 | MTR_4g105550 | 35.374 | 294 | 162 | 10 | 2 | 280 | 10 | 290 | 6.32e-51 | 170 |
| MS.gene064162.t1 | MTR_4g132450 | 32.443 | 262 | 149 | 13 | 34 | 277 | 38 | 289 | 5.66e-28 | 110 |
| MS.gene064162.t1 | MTR_5g037310 | 29.592 | 294 | 184 | 10 | 13 | 288 | 8 | 296 | 1.03e-27 | 109 |
| MS.gene064162.t1 | MTR_5g037310 | 29.592 | 294 | 184 | 10 | 13 | 288 | 8 | 296 | 1.26e-27 | 109 |
| MS.gene064162.t1 | MTR_2g023970 | 33.203 | 256 | 135 | 13 | 32 | 265 | 22 | 263 | 1.45e-27 | 109 |
| MS.gene064162.t1 | MTR_8g090055 | 30.712 | 267 | 156 | 11 | 15 | 265 | 10 | 263 | 2.02e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064162.t1 | AT3G17350 | 63.934 | 244 | 79 | 4 | 32 | 267 | 29 | 271 | 5.50e-112 | 326 |
| MS.gene064162.t1 | AT3G17350 | 64.583 | 240 | 76 | 4 | 34 | 265 | 31 | 269 | 5.60e-111 | 323 |
| MS.gene064162.t1 | AT5G50290 | 33.582 | 268 | 160 | 7 | 13 | 264 | 1 | 266 | 6.47e-47 | 160 |
| MS.gene064162.t1 | AT1G10380 | 34.800 | 250 | 136 | 9 | 34 | 264 | 29 | 270 | 4.62e-32 | 121 |
| MS.gene064162.t1 | AT1G10380 | 34.800 | 250 | 136 | 9 | 34 | 264 | 29 | 270 | 5.13e-32 | 120 |
| MS.gene064162.t1 | AT1G11915 | 30.827 | 266 | 163 | 8 | 5 | 255 | 4 | 263 | 2.86e-29 | 114 |
Find 59 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCCTTTGGATTGGGTTTA+TGG | 0.099494 | 8.4:+11096150 | MS.gene064162:CDS |
| GTTTATGAGTATGAATATTT+TGG | 0.176981 | 8.4:+11096077 | MS.gene064162:CDS |
| GTCCTTTGGATTGGGTTTAT+GGG | 0.234143 | 8.4:+11096151 | MS.gene064162:CDS |
| TTATTCTTTCAAACTCCTTC+TGG | 0.239774 | 8.4:+11095721 | MS.gene064162:CDS |
| AAACCGAATGGGTAGTTTAT+AGG | 0.261528 | 8.4:-11095640 | None:intergenic |
| CACACTTGTGATGAGCTTTA+TGG | 0.305918 | 8.4:+11095970 | MS.gene064162:CDS |
| ATTGAGAGGTGTTGGTCCTT+TGG | 0.340253 | 8.4:+11096137 | MS.gene064162:CDS |
| TCCTTCTGATATCATGCTTC+CGG | 0.381010 | 8.4:-11096788 | None:intergenic |
| CAACTTTCACATCCAGTATC+AGG | 0.395675 | 8.4:-11096195 | None:intergenic |
| AAGGAGTGTACAATGCTCTT+TGG | 0.408970 | 8.4:+11096806 | MS.gene064162:CDS |
| CACAATCTGGTGGGATTTGT+GGG | 0.413624 | 8.4:+11096220 | MS.gene064162:CDS |
| TGGCTTGTAGTAGTTGTAGA+TGG | 0.416349 | 8.4:-11095570 | None:intergenic |
| TAAAACAAAGATATTTGTAA+TGG | 0.422370 | 8.4:-11095936 | None:intergenic |
| AGGTGTTGGTCCTTTGGATT+GGG | 0.424565 | 8.4:+11096143 | MS.gene064162:CDS |
| GAGGTGTTGGTCCTTTGGAT+TGG | 0.424668 | 8.4:+11096142 | MS.gene064162:CDS |
| TGTATCTCAGCTGCTGGAAC+CGG | 0.428657 | 8.4:+11096769 | MS.gene064162:intron |
| ATGGAGCAAGTTGACATTGA+TGG | 0.431134 | 8.4:-11095799 | None:intergenic |
| TATAAACTACCCATTCGGTT+TGG | 0.432975 | 8.4:+11095642 | MS.gene064162:CDS |
| TACCCATTCGGTTTGGAAGA+TGG | 0.440399 | 8.4:+11095649 | MS.gene064162:CDS |
| TATTTGTAATGGTTAAGAAC+AGG | 0.444608 | 8.4:-11095925 | None:intergenic |
| ACACAATCTGGTGGGATTTG+TGG | 0.447706 | 8.4:+11096219 | MS.gene064162:CDS |
| TTCGGTTTGGAAGATGGTTG+TGG | 0.449681 | 8.4:+11095655 | MS.gene064162:CDS |
| GCAGGGTGAGAGTGTGTGAA+TGG | 0.463159 | 8.4:-11095596 | None:intergenic |
| ATTCCTATAAACTACCCATT+CGG | 0.492935 | 8.4:+11095637 | MS.gene064162:CDS |
| ATCATGATGAGGTTGAAGAA+TGG | 0.498307 | 8.4:-11095818 | None:intergenic |
| TGCTATTATTCCTCCATCAC+AGG | 0.508874 | 8.4:+11095864 | MS.gene064162:CDS |
| AACCATCTTCCAAACCGAAT+GGG | 0.514516 | 8.4:-11095651 | None:intergenic |
| TGGAGCAAGTTGACATTGAT+GGG | 0.527863 | 8.4:-11095798 | None:intergenic |
| TGTGAAAGTTGTACACAATC+TGG | 0.535884 | 8.4:+11096207 | MS.gene064162:CDS |
| AGTGATAAATTGAGAGGTGT+TGG | 0.537265 | 8.4:+11096129 | MS.gene064162:CDS |
| ATGAGTTTGAAGATTGTGAA+TGG | 0.557897 | 8.4:-11095535 | None:intergenic |
| CAGGGTGAGAGTGTGTGAAT+GGG | 0.561055 | 8.4:-11095595 | None:intergenic |
| CAAGTTTCACTAATTCAACA+AGG | 0.561620 | 8.4:+11096280 | MS.gene064162:CDS |
| TGAGAGTGTGTGAATGGGAA+TGG | 0.572032 | 8.4:-11095590 | None:intergenic |
| ACTAATTCAACAAGGGAATG+TGG | 0.573682 | 8.4:+11096288 | MS.gene064162:CDS |
| TATAGGAATGGTACCACATG+AGG | 0.575471 | 8.4:-11095623 | None:intergenic |
| CAACCATCTTCCAAACCGAA+TGG | 0.581667 | 8.4:-11095652 | None:intergenic |
| CTACAATAAGCAAAACCACT+TGG | 0.586476 | 8.4:-11096837 | None:intergenic |
| ATCCCATAAACCCAATCCAA+AGG | 0.604071 | 8.4:-11096153 | None:intergenic |
| ACCGGAAGCATGATATCAGA+AGG | 0.604148 | 8.4:+11096787 | MS.gene064162:CDS |
| AAAACAGTGTCCTGTGATGG+AGG | 0.608306 | 8.4:-11095874 | None:intergenic |
| TGTACAATGCTCTTTGGACA+CGG | 0.610218 | 8.4:+11096812 | MS.gene064162:CDS |
| CTCGTGAAACAACAAGGTGG+TGG | 0.615967 | 8.4:-11096039 | None:intergenic |
| GAATGGGTAGTTTATAGGAA+TGG | 0.619390 | 8.4:-11095635 | None:intergenic |
| TGAACTTTGTAAGAACCAGA+AGG | 0.628532 | 8.4:-11095736 | None:intergenic |
| TCACCCTGCAAAACCTCATG+TGG | 0.633355 | 8.4:+11095610 | MS.gene064162:CDS |
| TTTAATAGTGATAAATTGAG+AGG | 0.647028 | 8.4:+11096123 | MS.gene064162:CDS |
| TTGAACATGTTTCTGAACTG+TGG | 0.654643 | 8.4:-11095682 | None:intergenic |
| TTATAGCTCGTGAAACAACA+AGG | 0.671730 | 8.4:-11096045 | None:intergenic |
| TCTTTGGACACGGCACCAAG+TGG | 0.673512 | 8.4:+11096822 | MS.gene064162:CDS |
| TGATGGGTCGTAGAGTACCA+TGG | 0.674328 | 8.4:-11095782 | None:intergenic |
| ACTTGTGATGAGCTTTATGG+TGG | 0.679797 | 8.4:+11095973 | MS.gene064162:CDS |
| GGGTTTGATACTGAAACTGA+AGG | 0.680082 | 8.4:+11096240 | MS.gene064162:CDS |
| AAGTTTCACTAATTCAACAA+GGG | 0.686221 | 8.4:+11096281 | MS.gene064162:CDS |
| GAAAGTTGTACACAATCTGG+TGG | 0.691833 | 8.4:+11096210 | MS.gene064162:CDS |
| GTCATGAGAAAATCATGATG+AGG | 0.693658 | 8.4:-11095829 | None:intergenic |
| AAAGTTGTACACAATCTGGT+GGG | 0.724462 | 8.4:+11096211 | MS.gene064162:CDS |
| AGTTTGAAAGAATAACTCAG+TGG | 0.732725 | 8.4:-11095713 | None:intergenic |
| TAGCTCGTGAAACAACAAGG+TGG | 0.804087 | 8.4:-11096042 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTTTAGAAATTAAAA+AGG | + | chr8.4:11096446-11096465 | MS.gene064162:intron | 10.0% |
| !! | TAAAACAAAGATATTTGTAA+TGG | - | chr8.4:11095939-11095958 | None:intergenic | 15.0% |
| !! | TTTAATAGTGATAAATTGAG+AGG | + | chr8.4:11096123-11096142 | MS.gene064162:CDS | 20.0% |
| !!! | GTTTATGAGTATGAATATTT+TGG | + | chr8.4:11096077-11096096 | MS.gene064162:CDS | 20.0% |
| !!! | TATCTTTGTTTTAACTTTGA+AGG | + | chr8.4:11095946-11095965 | MS.gene064162:CDS | 20.0% |
| !!! | TATTTGGATTTTGAATCATT+TGG | + | chr8.4:11096331-11096350 | MS.gene064162:intron | 20.0% |
| ! | AAATAGAATACGGAAACTTA+CGG | - | chr8.4:11096749-11096768 | None:intergenic | 25.0% |
| ! | AAGTTTCACTAATTCAACAA+GGG | + | chr8.4:11096281-11096300 | MS.gene064162:CDS | 25.0% |
| ! | CTGAGATACAAAATAGAATA+CGG | - | chr8.4:11096759-11096778 | None:intergenic | 25.0% |
| ! | TATTTGTAATGGTTAAGAAC+AGG | - | chr8.4:11095928-11095947 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGTTGATAACAGT+AGG | + | chr8.4:11096613-11096632 | MS.gene064162:intron | 25.0% |
| !!! | TAAGTTTTATCTGAGTTGTT+AGG | + | chr8.4:11096641-11096660 | MS.gene064162:intron | 25.0% |
| AGTTTGAAAGAATAACTCAG+TGG | - | chr8.4:11095716-11095735 | None:intergenic | 30.0% | |
| ATGAGTTTGAAGATTGTGAA+TGG | - | chr8.4:11095538-11095557 | None:intergenic | 30.0% | |
| ATTCCTATAAACTACCCATT+CGG | + | chr8.4:11095637-11095656 | MS.gene064162:CDS | 30.0% | |
| CAAGTTTCACTAATTCAACA+AGG | + | chr8.4:11096280-11096299 | MS.gene064162:CDS | 30.0% | |
| CTACTACTTGGTTTCTTATT+TGG | + | chr8.4:11096315-11096334 | MS.gene064162:intron | 30.0% | |
| GGTGCTAGTTAATATGAATA+GGG | + | chr8.4:11096352-11096371 | MS.gene064162:intron | 30.0% | |
| TGACTACAACAAAAAAACCA+TGG | + | chr8.4:11095765-11095784 | MS.gene064162:CDS | 30.0% | |
| TTATTCTTTCAAACTCCTTC+TGG | + | chr8.4:11095721-11095740 | MS.gene064162:CDS | 30.0% | |
| ! | AGTTTTTCTTCACAAGATGA+GGG | + | chr8.4:11096858-11096877 | MS.gene064162:CDS | 30.0% |
| ! | TAGTTTTTCTTCACAAGATG+AGG | + | chr8.4:11096857-11096876 | MS.gene064162:CDS | 30.0% |
| ! | TCACCAACAACAATTTTGAA+AGG | - | chr8.4:11096581-11096600 | None:intergenic | 30.0% |
| ! | TGGTGCTAGTTAATATGAAT+AGG | + | chr8.4:11096351-11096370 | MS.gene064162:intron | 30.0% |
| !! | CACCAACAACAATTTTGAAA+GGG | - | chr8.4:11096580-11096599 | None:intergenic | 30.0% |
| !!! | GGTTTTTTTGTTGTAGTCAA+TGG | - | chr8.4:11095764-11095783 | None:intergenic | 30.0% |
| AAACCGAATGGGTAGTTTAT+AGG | - | chr8.4:11095643-11095662 | None:intergenic | 35.0% | |
| AAAGTTGTACACAATCTGGT+GGG | + | chr8.4:11096211-11096230 | MS.gene064162:CDS | 35.0% | |
| ACTAATTCAACAAGGGAATG+TGG | + | chr8.4:11096288-11096307 | MS.gene064162:CDS | 35.0% | |
| ATCATGATGAGGTTGAAGAA+TGG | - | chr8.4:11095821-11095840 | None:intergenic | 35.0% | |
| CACCCTTTCAAAATTGTTGT+TGG | + | chr8.4:11096575-11096594 | MS.gene064162:intron | 35.0% | |
| CTACAATAAGCAAAACCACT+TGG | - | chr8.4:11096840-11096859 | None:intergenic | 35.0% | |
| GAAAATCATACAGCACTAAC+TGG | + | chr8.4:11096468-11096487 | MS.gene064162:intron | 35.0% | |
| GAATGGGTAGTTTATAGGAA+TGG | - | chr8.4:11095638-11095657 | None:intergenic | 35.0% | |
| GTCATGAGAAAATCATGATG+AGG | - | chr8.4:11095832-11095851 | None:intergenic | 35.0% | |
| TATAAACTACCCATTCGGTT+TGG | + | chr8.4:11095642-11095661 | MS.gene064162:CDS | 35.0% | |
| TGAACTTTGTAAGAACCAGA+AGG | - | chr8.4:11095739-11095758 | None:intergenic | 35.0% | |
| TGTGAAAGTTGTACACAATC+TGG | + | chr8.4:11096207-11096226 | MS.gene064162:CDS | 35.0% | |
| TTATAGCTCGTGAAACAACA+AGG | - | chr8.4:11096048-11096067 | None:intergenic | 35.0% | |
| ! | AGTGATAAATTGAGAGGTGT+TGG | + | chr8.4:11096129-11096148 | MS.gene064162:CDS | 35.0% |
| ! | GTTTTTCTTCACAAGATGAG+GGG | + | chr8.4:11096859-11096878 | MS.gene064162:CDS | 35.0% |
| ! | TTGAACATGTTTCTGAACTG+TGG | - | chr8.4:11095685-11095704 | None:intergenic | 35.0% |
| ! | TTTTTCTTCACAAGATGAGG+GGG | + | chr8.4:11096860-11096879 | MS.gene064162:CDS | 35.0% |
| AACCATCTTCCAAACCGAAT+GGG | - | chr8.4:11095654-11095673 | None:intergenic | 40.0% | |
| ACAAAAACAGTGTCCTGTGA+TGG | - | chr8.4:11095880-11095899 | None:intergenic | 40.0% | |
| ATCCCATAAACCCAATCCAA+AGG | - | chr8.4:11096156-11096175 | None:intergenic | 40.0% | |
| CAACTTTCACATCCAGTATC+AGG | - | chr8.4:11096198-11096217 | None:intergenic | 40.0% | |
| CACACTTGTGATGAGCTTTA+TGG | + | chr8.4:11095970-11095989 | MS.gene064162:CDS | 40.0% | |
| GAAAGTTGTACACAATCTGG+TGG | + | chr8.4:11096210-11096229 | MS.gene064162:CDS | 40.0% | |
| GAATACGGAAACTTACGGTT+AGG | - | chr8.4:11096744-11096763 | None:intergenic | 40.0% | |
| GAATGTGGTAAGCTACTACT+TGG | + | chr8.4:11096303-11096322 | MS.gene064162:intron | 40.0% | |
| GGGTTTGATACTGAAACTGA+AGG | + | chr8.4:11096240-11096259 | MS.gene064162:CDS | 40.0% | |
| TATAGGAATGGTACCACATG+AGG | - | chr8.4:11095626-11095645 | None:intergenic | 40.0% | |
| TCCTTCTGATATCATGCTTC+CGG | - | chr8.4:11096791-11096810 | None:intergenic | 40.0% | |
| TGCTATTATTCCTCCATCAC+AGG | + | chr8.4:11095864-11095883 | MS.gene064162:CDS | 40.0% | |
| TGTACAATGCTCTTTGGACA+CGG | + | chr8.4:11096812-11096831 | MS.gene064162:CDS | 40.0% | |
| TTGCTTCGAGCTTAGAGTTA+AGG | - | chr8.4:11096701-11096720 | None:intergenic | 40.0% | |
| ! | AAGGAGTGTACAATGCTCTT+TGG | + | chr8.4:11096806-11096825 | MS.gene064162:CDS | 40.0% |
| ! | ACTTGTGATGAGCTTTATGG+TGG | + | chr8.4:11095973-11095992 | MS.gene064162:CDS | 40.0% |
| ! | ATGGAGCAAGTTGACATTGA+TGG | - | chr8.4:11095802-11095821 | None:intergenic | 40.0% |
| ! | ATGGTGGTTGCAATGCTTTT+AGG | + | chr8.4:11095989-11096008 | MS.gene064162:CDS | 40.0% |
| ! | CTATTTTGTATCTCAGCTGC+TGG | + | chr8.4:11096763-11096782 | MS.gene064162:intron | 40.0% |
| ! | GTCCTTTGGATTGGGTTTAT+GGG | + | chr8.4:11096151-11096170 | MS.gene064162:CDS | 40.0% |
| ! | TCTTTTAGTGTGCCTGATAC+TGG | + | chr8.4:11096183-11096202 | MS.gene064162:CDS | 40.0% |
| ! | TGGAGCAAGTTGACATTGAT+GGG | - | chr8.4:11095801-11095820 | None:intergenic | 40.0% |
| ! | TGGCTTGTAGTAGTTGTAGA+TGG | - | chr8.4:11095573-11095592 | None:intergenic | 40.0% |
| ! | TGGTGGTTGCAATGCTTTTA+GGG | + | chr8.4:11095990-11096009 | MS.gene064162:CDS | 40.0% |
| AAAACAGTGTCCTGTGATGG+AGG | - | chr8.4:11095877-11095896 | None:intergenic | 45.0% | |
| ACACAATCTGGTGGGATTTG+TGG | + | chr8.4:11096219-11096238 | MS.gene064162:CDS | 45.0% | |
| CAACCATCTTCCAAACCGAA+TGG | - | chr8.4:11095655-11095674 | None:intergenic | 45.0% | |
| CACAATCTGGTGGGATTTGT+GGG | + | chr8.4:11096220-11096239 | MS.gene064162:CDS | 45.0% | |
| GCAATTGAGCTACCAAAACC+TGG | + | chr8.4:11096717-11096736 | MS.gene064162:intron | 45.0% | |
| TAGCTCGTGAAACAACAAGG+TGG | - | chr8.4:11096045-11096064 | None:intergenic | 45.0% | |
| ! | ACCGGAAGCATGATATCAGA+AGG | + | chr8.4:11096787-11096806 | MS.gene064162:CDS | 45.0% |
| ! | GGTCCTTTGGATTGGGTTTA+TGG | + | chr8.4:11096150-11096169 | MS.gene064162:CDS | 45.0% |
| ! | GTACCACATGAGGTTTTGCA+GGG | - | chr8.4:11095616-11095635 | None:intergenic | 45.0% |
| ! | TGAGAGTGTGTGAATGGGAA+TGG | - | chr8.4:11095593-11095612 | None:intergenic | 45.0% |
| ! | TTACGGTTAGGACCAGGTTT+TGG | - | chr8.4:11096732-11096751 | None:intergenic | 45.0% |
| !! | AGGTGTTGGTCCTTTGGATT+GGG | + | chr8.4:11096143-11096162 | MS.gene064162:CDS | 45.0% |
| !! | ATTGAGAGGTGTTGGTCCTT+TGG | + | chr8.4:11096137-11096156 | MS.gene064162:CDS | 45.0% |
| !! | TACCCATTCGGTTTGGAAGA+TGG | + | chr8.4:11095649-11095668 | MS.gene064162:CDS | 45.0% |
| !! | TTCGGTTTGGAAGATGGTTG+TGG | + | chr8.4:11095655-11095674 | MS.gene064162:CDS | 45.0% |
| CTCGTGAAACAACAAGGTGG+TGG | - | chr8.4:11096042-11096061 | None:intergenic | 50.0% | |
| GGAAACTTACGGTTAGGACC+AGG | - | chr8.4:11096738-11096757 | None:intergenic | 50.0% | |
| TCACCCTGCAAAACCTCATG+TGG | + | chr8.4:11095610-11095629 | MS.gene064162:CDS | 50.0% | |
| TGTATCTCAGCTGCTGGAAC+CGG | + | chr8.4:11096769-11096788 | MS.gene064162:intron | 50.0% | |
| ! | CAGGGTGAGAGTGTGTGAAT+GGG | - | chr8.4:11095598-11095617 | None:intergenic | 50.0% |
| ! | GGTACCACATGAGGTTTTGC+AGG | - | chr8.4:11095617-11095636 | None:intergenic | 50.0% |
| ! | TGATGGGTCGTAGAGTACCA+TGG | - | chr8.4:11095785-11095804 | None:intergenic | 50.0% |
| !! | GAGGTGTTGGTCCTTTGGAT+TGG | + | chr8.4:11096142-11096161 | MS.gene064162:CDS | 50.0% |
| TCTTTGGACACGGCACCAAG+TGG | + | chr8.4:11096822-11096841 | MS.gene064162:CDS | 55.0% | |
| ! | GCAGGGTGAGAGTGTGTGAA+TGG | - | chr8.4:11095599-11095618 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11095517 | 11096891 | 11095517 | ID=MS.gene064162 |
| chr8.4 | mRNA | 11095517 | 11096891 | 11095517 | ID=MS.gene064162.t1;Parent=MS.gene064162 |
| chr8.4 | exon | 11095517 | 11096309 | 11095517 | ID=MS.gene064162.t1.exon1;Parent=MS.gene064162.t1 |
| chr8.4 | CDS | 11095517 | 11096309 | 11095517 | ID=cds.MS.gene064162.t1;Parent=MS.gene064162.t1 |
| chr8.4 | exon | 11096779 | 11096891 | 11096779 | ID=MS.gene064162.t1.exon2;Parent=MS.gene064162.t1 |
| chr8.4 | CDS | 11096779 | 11096891 | 11096779 | ID=cds.MS.gene064162.t1;Parent=MS.gene064162.t1 |
| Gene Sequence |
| Protein sequence |
