Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057483.t1 | XP_003621414.1 | 92.2 | 460 | 31 | 3 | 1 | 459 | 1 | 456 | 1.80E-149 | 539.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057483.t1 | F4I2H7 | 29.6 | 206 | 86 | 3 | 285 | 431 | 522 | 727 | 3.2e-14 | 81.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057483.t1 | G7L582 | 92.2 | 460 | 31 | 3 | 1 | 459 | 1 | 456 | 1.3e-149 | 539.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene057483 | 0.842007 | 3.36E-58 | -1.69E-46 |
| MS.gene050297 | MS.gene057483 | 0.864978 | 8.24E-65 | -1.69E-46 |
| MS.gene052143 | MS.gene057483 | 0.836993 | 6.76E-57 | -1.69E-46 |
| MS.gene052367 | MS.gene057483 | 0.852845 | 3.53E-61 | -1.69E-46 |
| MS.gene053416 | MS.gene057483 | 0.825271 | 5.14E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene057483 | 0.827172 | 1.81E-54 | -1.69E-46 |
| MS.gene054643 | MS.gene057483 | 0.829052 | 6.39E-55 | -1.69E-46 |
| MS.gene055957 | MS.gene057483 | 0.820254 | 7.56E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene057483 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene058818 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene058844 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene059300 | 0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene06057 | 0.837721 | 4.40E-57 | -1.69E-46 |
| MS.gene057483 | MS.gene061260 | 0.81672 | 4.78E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene061275 | 0.825801 | 3.84E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene061805 | 0.844808 | 6.01E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene064161 | 0.801039 | 1.09E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene064162 | 0.81787 | 2.63E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene065643 | 0.819931 | 8.96E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene066031 | 0.84681 | 1.72E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene067030 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene067039 | 0.868116 | 8.29E-66 | -1.69E-46 |
| MS.gene057483 | MS.gene067143 | 0.824021 | 1.01E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene067144 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene068190 | 0.81966 | 1.03E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene068305 | 0.818041 | 2.41E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene068547 | 0.835363 | 1.75E-56 | -1.69E-46 |
| MS.gene057483 | MS.gene068548 | 0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene068607 | 0.818816 | 1.61E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene069090 | 0.824613 | 7.34E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene069140 | 0.813558 | 2.41E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene07028 | 0.820367 | 7.12E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene07048 | 0.826448 | 2.70E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene07051 | 0.818839 | 1.59E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene070885 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene071651 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene072719 | 0.821244 | 4.48E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene072954 | 0.807406 | 5.13E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene072956 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene072963 | 0.808256 | 3.39E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene073606 | 0.803211 | 3.88E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene073698 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene073834 | 0.804388 | 2.21E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene073862 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene073863 | 0.817125 | 3.88E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene07425 | 0.851844 | 6.81E-61 | -1.69E-46 |
| MS.gene057483 | MS.gene08815 | 0.82218 | 2.72E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene08971 | 0.830864 | 2.31E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene09245 | 0.800126 | 1.67E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene09275 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene09540 | 0.826181 | 3.12E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene09543 | 0.830895 | 2.27E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene20335 | 0.800845 | 1.19E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene21320 | 0.840294 | 9.48E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene22500 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene23323 | 0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene23792 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene23980 | 0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene24682 | 0.807913 | 4.01E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene24699 | 0.85761 | 1.45E-62 | -1.69E-46 |
| MS.gene057483 | MS.gene24735 | 0.807672 | 4.51E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene24982 | 0.803324 | 3.68E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene26114 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene26224 | 0.856984 | 2.22E-62 | -1.69E-46 |
| MS.gene057483 | MS.gene26665 | 0.834067 | 3.71E-56 | -1.69E-46 |
| MS.gene057483 | MS.gene27495 | 0.829561 | 4.80E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene27823 | 0.806172 | 9.36E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene27941 | 0.812624 | 3.86E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene28050 | 0.846893 | 1.63E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene28787 | 0.821408 | 4.10E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene28867 | 0.825446 | 4.67E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene30854 | 0.823262 | 1.52E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene32703 | 0.843632 | 1.24E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene33123 | 0.807279 | 5.46E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene33688 | 0.815961 | 7.07E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene35150 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene35715 | 0.835556 | 1.57E-56 | -1.69E-46 |
| MS.gene057483 | MS.gene36485 | 0.827939 | 1.19E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene37573 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene38714 | 0.818221 | 2.20E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene38828 | 0.807354 | 5.27E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene40329 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene42286 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene42665 | 0.84253 | 2.44E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene44100 | 0.815992 | 6.96E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene44222 | 0.866808 | 2.18E-65 | -1.69E-46 |
| MS.gene057483 | MS.gene44386 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene47007 | 0.817063 | 4.00E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene47280 | 0.813285 | 2.77E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene47899 | 0.811704 | 6.13E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene48067 | 0.803908 | 2.78E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene50479 | 0.837053 | 6.52E-57 | -1.69E-46 |
| MS.gene057483 | MS.gene50613 | 0.811155 | 8.07E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene52607 | 0.839622 | 1.42E-57 | -1.69E-46 |
| MS.gene057483 | MS.gene52703 | 0.820171 | 7.90E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene52975 | 0.855468 | 6.18E-62 | -1.69E-46 |
| MS.gene057483 | MS.gene55687 | 0.82004 | 8.46E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene55782 | 0.844005 | 9.88E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene55817 | 0.815286 | 9.99E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene57320 | 0.844403 | 7.73E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene57701 | 0.822565 | 2.21E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene57750 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene57751 | 0.817451 | 3.27E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene57752 | 0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene58096 | 0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene58234 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene58754 | 0.830259 | 3.25E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene58772 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene59357 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene59466 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene60472 | 0.802445 | 5.59E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene60598 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene61947 | 0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene61977 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene62085 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene63578 | 0.821932 | 3.10E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene63853 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene64717 | 0.816376 | 5.71E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene64859 | 0.821041 | 4.99E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene65301 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene66158 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene66159 | 0.816353 | 5.78E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene67223 | 0.813575 | 2.39E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene67555 | 0.815281 | 1.00E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene68361 | 0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene70240 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene70403 | 0.802593 | 5.21E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene70838 | 0.811327 | 7.40E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene70896 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene70898 | 0.81878 | 1.64E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene71419 | 0.854755 | 9.96E-62 | -1.69E-46 |
| MS.gene057483 | MS.gene71431 | 0.807218 | 5.63E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene72127 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene72129 | 0.811164 | 8.03E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene73305 | 0.808947 | 2.41E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene74328 | 0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene75320 | 0.805116 | 1.56E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene75567 | 0.854361 | 1.30E-61 | -1.69E-46 |
| MS.gene057483 | MS.gene75579 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene75642 | 0.80865 | 2.79E-50 | -1.69E-46 |
| MS.gene057483 | MS.gene75737 | 0.82498 | 6.01E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene76883 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene77475 | 0.842765 | 2.12E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene78972 | 0.816081 | 6.65E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene79126 | 0.824439 | 8.07E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene80180 | 0.850526 | 1.60E-60 | -1.69E-46 |
| MS.gene057483 | MS.gene80183 | 0.846138 | 2.62E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene80276 | 0.810981 | 8.79E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene84014 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene85599 | 0.82809 | 1.09E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene89565 | 0.824532 | 7.67E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene90876 | 0.82746 | 1.55E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene92758 | 0.823801 | 1.14E-53 | -1.69E-46 |
| MS.gene057483 | MS.gene93102 | 0.827041 | 1.95E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene93201 | 0.810777 | 9.74E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene97200 | 0.8458 | 3.24E-59 | -1.69E-46 |
| MS.gene057483 | MS.gene99093 | 0.84307 | 1.76E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene99127 | 0.817548 | 3.11E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene99878 | 0.819769 | 9.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057483.t1 | MTR_7g013070 | 96.304 | 460 | 12 | 3 | 1 | 459 | 1 | 456 | 0.0 | 881 |
| MS.gene057483.t1 | MTR_6g015010 | 48.509 | 503 | 167 | 15 | 23 | 459 | 8 | 484 | 2.66e-123 | 368 |
| MS.gene057483.t1 | MTR_3g064800 | 44.828 | 116 | 61 | 2 | 339 | 453 | 49 | 162 | 1.60e-22 | 94.7 |
| MS.gene057483.t1 | MTR_3g064800 | 44.828 | 116 | 61 | 2 | 339 | 453 | 19 | 132 | 1.80e-22 | 93.6 |
| MS.gene057483.t1 | MTR_3g064800 | 44.828 | 116 | 61 | 2 | 339 | 453 | 31 | 144 | 2.09e-22 | 93.6 |
| MS.gene057483.t1 | MTR_4g078565 | 28.696 | 230 | 102 | 5 | 283 | 451 | 511 | 739 | 5.84e-17 | 84.0 |
| MS.gene057483.t1 | MTR_4g078565 | 28.696 | 230 | 102 | 5 | 283 | 451 | 518 | 746 | 8.10e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057483.t1 | AT5G15510 | 51.681 | 476 | 178 | 14 | 6 | 439 | 11 | 476 | 2.71e-141 | 414 |
| MS.gene057483.t1 | AT5G15510 | 51.656 | 453 | 171 | 13 | 6 | 420 | 11 | 453 | 4.21e-134 | 394 |
| MS.gene057483.t1 | AT5G15510 | 51.656 | 453 | 171 | 13 | 6 | 420 | 11 | 453 | 4.21e-134 | 394 |
| MS.gene057483.t1 | AT5G15510 | 51.656 | 453 | 171 | 13 | 6 | 420 | 11 | 453 | 5.81e-133 | 394 |
| MS.gene057483.t1 | AT3G01015 | 49.896 | 479 | 184 | 13 | 17 | 458 | 23 | 482 | 1.29e-124 | 371 |
| MS.gene057483.t1 | AT5G37478 | 41.803 | 122 | 64 | 1 | 337 | 458 | 36 | 150 | 2.00e-22 | 94.0 |
| MS.gene057483.t1 | AT5G37478 | 41.803 | 122 | 64 | 1 | 337 | 458 | 56 | 170 | 2.60e-22 | 94.4 |
| MS.gene057483.t1 | AT5G37478 | 41.803 | 122 | 64 | 1 | 337 | 458 | 23 | 137 | 3.73e-22 | 92.8 |
| MS.gene057483.t1 | AT1G03780 | 29.327 | 208 | 88 | 3 | 285 | 433 | 522 | 729 | 2.36e-17 | 85.5 |
| MS.gene057483.t1 | AT1G03780 | 29.327 | 208 | 88 | 3 | 285 | 433 | 522 | 729 | 2.53e-17 | 85.5 |
Find 112 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTCTGTTTCTTCTTCT+TGG | 0.155336 | 7.2:-84255553 | MS.gene057483:CDS |
| CCATCTTCATCCTCATTCTT+AGG | 0.170994 | 7.2:+84255677 | None:intergenic |
| AGAGAGAATGATGATGTTTC+TGG | 0.200384 | 7.2:-84255635 | MS.gene057483:CDS |
| GAATTTCCTTCGCCGGATTT+TGG | 0.204787 | 7.2:+84256087 | None:intergenic |
| GAACAAGAAGGAGGAGTATT+AGG | 0.211260 | 7.2:+84256172 | None:intergenic |
| ACAACTACATTATCAATTTC+AGG | 0.212730 | 7.2:+84255851 | None:intergenic |
| TCCTCACCTCCTTGGGATAA+AGG | 0.244906 | 7.2:+84252381 | None:intergenic |
| GTTTGAGGAGAATTGGGATT+AGG | 0.249967 | 7.2:+84256109 | None:intergenic |
| CTTCATAGAGCAATATAAAT+TGG | 0.265056 | 7.2:-84252597 | MS.gene057483:CDS |
| TATGGCATAGGTTGTGCTTT+TGG | 0.268988 | 7.2:+84252415 | None:intergenic |
| TGCTTCTGTTTCTTCTTCTT+GGG | 0.275677 | 7.2:-84255552 | MS.gene057483:CDS |
| AGAGAGAGTGTTACACAAAT+TGG | 0.277069 | 7.2:-84255752 | MS.gene057483:CDS |
| GGGTTAGGGTTAGGGTTGTT+AGG | 0.278228 | 7.2:+84256130 | None:intergenic |
| TTTGAGGAGAATTGGGATTA+GGG | 0.289446 | 7.2:+84256110 | None:intergenic |
| GTTTACATTCTCAGTGTGTT+TGG | 0.293505 | 7.2:+84256195 | None:intergenic |
| CTTGACTCTTTCTCAAATTA+CGG | 0.296250 | 7.2:+84255945 | None:intergenic |
| GAAAGAGGGTGATGTGGGTT+TGG | 0.306741 | 7.2:-84255819 | MS.gene057483:CDS |
| AGTTGAGGCAGGAGGAGTTT+TGG | 0.313368 | 7.2:+84252156 | None:intergenic |
| TTGGGATTAGGGTTAGGGTT+AGG | 0.317254 | 7.2:+84256121 | None:intergenic |
| TGGGATTAGGGTTAGGGTTA+GGG | 0.330992 | 7.2:+84256122 | None:intergenic |
| AAAGAGGGTGATGTGGGTTT+GGG | 0.339781 | 7.2:-84255818 | MS.gene057483:CDS |
| GTTCGAAGCTTGAAAGGTTC+TGG | 0.353153 | 7.2:+84253608 | None:intergenic |
| ATAAAGGGTCTGTCGAAATA+TGG | 0.353466 | 7.2:+84252397 | None:intergenic |
| GTCAGGGAAGGTTCAGAGTT+TGG | 0.356185 | 7.2:-84255729 | MS.gene057483:CDS |
| CTTGACCTTCTTATGAAACT+TGG | 0.358432 | 7.2:+84252220 | None:intergenic |
| TTTACATTCTCAGTGTGTTT+GGG | 0.361884 | 7.2:+84256196 | None:intergenic |
| CAAGGAAGACCTTGTGCAAC+AGG | 0.373355 | 7.2:+84253372 | None:intergenic |
| AGCACGCGGTGTGGTTGTTC+CGG | 0.379453 | 7.2:+84256246 | None:intergenic |
| CCTCACCTCCTTGGGATAAA+GGG | 0.389323 | 7.2:+84252382 | None:intergenic |
| GGAGAATTGGGATTAGGGTT+AGG | 0.389466 | 7.2:+84256115 | None:intergenic |
| GAGAATTGGGATTAGGGTTA+GGG | 0.390209 | 7.2:+84256116 | None:intergenic |
| CTGTTGCACAAGGTCTTCCT+TGG | 0.397605 | 7.2:-84253371 | MS.gene057483:CDS |
| TCTGTTTCTTCTTCTTGGGA+TGG | 0.399475 | 7.2:-84255548 | MS.gene057483:CDS |
| GCACATCAGTATGAAGCTTC+AGG | 0.399654 | 7.2:+84253145 | None:intergenic |
| AACAAGAAGGAGGAGTATTA+GGG | 0.402247 | 7.2:+84256173 | None:intergenic |
| AGAGAAGTAGAGAGAGATTG+AGG | 0.402924 | 7.2:-84255784 | MS.gene057483:CDS |
| GAATCAACAACCACCACTCT+TGG | 0.407987 | 7.2:-84253674 | MS.gene057483:CDS |
| AGAAGAGGTATTTGAACAAA+AGG | 0.423982 | 7.2:-84253433 | MS.gene057483:CDS |
| GTATGAAGCTTCAGGTCAAC+AGG | 0.431022 | 7.2:+84253153 | None:intergenic |
| GAAGGTTCAGAGTTTGGTTA+AGG | 0.432189 | 7.2:-84255723 | MS.gene057483:CDS |
| GTAATTGTAAAGAGAAGAAT+AGG | 0.432522 | 7.2:-84255988 | MS.gene057483:CDS |
| TCATACTGATGTGCGGGCGC+TGG | 0.436040 | 7.2:-84253136 | MS.gene057483:CDS |
| AATCAACAACCACCACTCTT+GGG | 0.438310 | 7.2:-84253673 | MS.gene057483:CDS |
| TTGACCTTCTTATGAAACTT+GGG | 0.444865 | 7.2:+84252221 | None:intergenic |
| CGAAGGAAATTCGTTGTTGT+GGG | 0.449068 | 7.2:-84256076 | MS.gene057483:CDS |
| TAGAGAGAGATTGAGGGAAG+AGG | 0.449147 | 7.2:-84255777 | MS.gene057483:CDS |
| TAGATCAATCCTCACCTCCT+TGG | 0.457853 | 7.2:+84252373 | None:intergenic |
| AGATCAATCCTCACCTCCTT+GGG | 0.458607 | 7.2:+84252374 | None:intergenic |
| AGTGTTACACAAATTGGGTC+AGG | 0.465959 | 7.2:-84255746 | MS.gene057483:CDS |
| TGAGGATGAAGATGGAAAAG+AGG | 0.472467 | 7.2:-84255669 | MS.gene057483:CDS |
| GGTATTGTAATTTCTTTGAC+CGG | 0.481455 | 7.2:+84253174 | None:intergenic |
| AATTGCAGCTTGACATCTAA+AGG | 0.482384 | 7.2:-84253816 | MS.gene057483:intron |
| GAGAAGTAGAGAGAGATTGA+GGG | 0.487312 | 7.2:-84255783 | MS.gene057483:CDS |
| TTTGTTTGAACCTAAGAATG+AGG | 0.489532 | 7.2:-84255687 | MS.gene057483:CDS |
| CAGAAGGAAGATGTGAAGGA+AGG | 0.491151 | 7.2:-84256043 | MS.gene057483:CDS |
| ACAGTGTTTGGCAAAACCTC+CGG | 0.491803 | 7.2:-84253193 | MS.gene057483:intron |
| GACGTCTCAGAATCTTGGGT+TGG | 0.495055 | 7.2:-84255582 | MS.gene057483:CDS |
| AGAAGGAAGATGTGAAGGAA+GGG | 0.496623 | 7.2:-84256042 | MS.gene057483:CDS |
| CAACAACGAATTTCCTTCGC+CGG | 0.505033 | 7.2:+84256080 | None:intergenic |
| AGAGCAATATAAATTGGAAA+AGG | 0.507125 | 7.2:-84252591 | MS.gene057483:CDS |
| ATTCTCCTCAAACCAAAATC+CGG | 0.507221 | 7.2:-84256099 | MS.gene057483:CDS |
| CTTGGGATGGATCTCGTGGA+AGG | 0.508275 | 7.2:-84255535 | MS.gene057483:intron |
| GAGAGAGTGTTACACAAATT+GGG | 0.508579 | 7.2:-84255751 | MS.gene057483:CDS |
| GAAGCTTGAAAGGTTCTGGC+CGG | 0.510027 | 7.2:+84253612 | None:intergenic |
| GAAACAGAAGGAAGATGTGA+AGG | 0.511692 | 7.2:-84256047 | MS.gene057483:CDS |
| TGAAGATGGAAAAGAGGAGA+AGG | 0.516034 | 7.2:-84255663 | MS.gene057483:CDS |
| CCTAAGAATGAGGATGAAGA+TGG | 0.517095 | 7.2:-84255677 | MS.gene057483:CDS |
| GAAGGAAGATGTGAAGGAAG+GGG | 0.517993 | 7.2:-84256041 | MS.gene057483:CDS |
| CTAAAGGAGGTAGAAGTAGC+AGG | 0.518096 | 7.2:-84253800 | MS.gene057483:CDS |
| CCGTGCTGAGTTTGATGAGC+AGG | 0.519569 | 7.2:-84253112 | MS.gene057483:intron |
| AAGGAAGATGTGAAGGAAGG+GGG | 0.526247 | 7.2:-84256040 | MS.gene057483:CDS |
| AAACAGAAAGAGGGTGATGT+GGG | 0.528180 | 7.2:-84255824 | MS.gene057483:CDS |
| AAGAGGAAAGGTTAAAGAAG+AGG | 0.529614 | 7.2:-84253448 | MS.gene057483:CDS |
| GCGAAGGAAATTCGTTGTTG+TGG | 0.532060 | 7.2:-84256077 | MS.gene057483:CDS |
| TGGGGAAGCTTAGTTGAGGC+AGG | 0.535030 | 7.2:+84252145 | None:intergenic |
| GAAGCTTCATACTGATGTGC+GGG | 0.536394 | 7.2:-84253142 | MS.gene057483:CDS |
| GCAGCAGCAGCTCATCGACA+TGG | 0.536697 | 7.2:-84252190 | MS.gene057483:CDS |
| AAGCTTGAAAGGTTCTGGCC+GGG | 0.543128 | 7.2:+84253613 | None:intergenic |
| TGACCTTCTTATGAAACTTG+GGG | 0.556484 | 7.2:+84252222 | None:intergenic |
| TCGACAGACCCTTTATCCCA+AGG | 0.562484 | 7.2:-84252390 | MS.gene057483:CDS |
| ACATCAGTTCGAAGCTTGAA+AGG | 0.569115 | 7.2:+84253602 | None:intergenic |
| TCTTCTTGGGATGGATCTCG+TGG | 0.569991 | 7.2:-84255539 | MS.gene057483:CDS |
| AACATGTCTTCGATCGTCGC+CGG | 0.570564 | 7.2:-84256265 | MS.gene057483:CDS |
| ATCAACAACCACCACTCTTG+GGG | 0.574386 | 7.2:-84253672 | MS.gene057483:CDS |
| CTCAAACCAAAATCCGGCGA+AGG | 0.586555 | 7.2:-84256093 | MS.gene057483:CDS |
| CAAAGGATTCCTGTTGCACA+AGG | 0.590082 | 7.2:-84253381 | MS.gene057483:CDS |
| AAGAAGAAATCAAAAGATTG+CGG | 0.597999 | 7.2:-84252450 | MS.gene057483:CDS |
| TACACAAATTGGGTCAGGGA+AGG | 0.598008 | 7.2:-84255741 | MS.gene057483:CDS |
| TCAGGTTCATCTGTTGTCCA+AGG | 0.603985 | 7.2:+84253354 | None:intergenic |
| AGACAGAAGAAGAGAAACAA+AGG | 0.605535 | 7.2:-84253398 | MS.gene057483:CDS |
| ATTAATGTAGCAAAGAGGAA+AGG | 0.607260 | 7.2:-84253460 | MS.gene057483:intron |
| AGAAATCAAAAGATTGCGGA+AGG | 0.608144 | 7.2:-84252446 | MS.gene057483:CDS |
| AAAACAGAAAGAGGGTGATG+TGG | 0.611411 | 7.2:-84255825 | MS.gene057483:CDS |
| GACCTTCTTATGAAACTTGG+GGG | 0.615822 | 7.2:+84252223 | None:intergenic |
| GAAGGAAATTCGTTGTTGTG+GGG | 0.616901 | 7.2:-84256075 | MS.gene057483:CDS |
| GGAATATTAATGTAGCAAAG+AGG | 0.625078 | 7.2:-84253465 | MS.gene057483:intron |
| TGTGGGGAAGAAGAAACAGA+AGG | 0.627788 | 7.2:-84256059 | MS.gene057483:CDS |
| ATTGTAATTTCTTTGACCGG+AGG | 0.630255 | 7.2:+84253177 | None:intergenic |
| TGAAGCTTCATACTGATGTG+CGG | 0.633745 | 7.2:-84253143 | MS.gene057483:CDS |
| GTGTTACACAAATTGGGTCA+GGG | 0.638761 | 7.2:-84255745 | MS.gene057483:CDS |
| GGAAGCTTAGTTGAGGCAGG+AGG | 0.643013 | 7.2:+84252148 | None:intergenic |
| GGTCTGTCGAAATATGGCAT+AGG | 0.651270 | 7.2:+84252403 | None:intergenic |
| GGAAAAGGAGAGACAACAGA+AGG | 0.651571 | 7.2:-84252576 | MS.gene057483:intron |
| CCTGCTCATCAAACTCAGCA+CGG | 0.657070 | 7.2:+84253112 | None:intergenic |
| TGCAGCTTGACATCTAAAGG+AGG | 0.677317 | 7.2:-84253813 | MS.gene057483:intron |
| TCAACAACCACCACTCTTGG+GGG | 0.683589 | 7.2:-84253671 | MS.gene057483:CDS |
| GAAGAAGAAACAGAAGCACG+CGG | 0.692861 | 7.2:+84255557 | None:intergenic |
| TATCTGGGGAAGCTTAGTTG+AGG | 0.695692 | 7.2:+84252141 | None:intergenic |
| CTTGATGATCTACAAGCACG+CGG | 0.704907 | 7.2:+84256232 | None:intergenic |
| TTGGACAACAGATGAACCTG+AGG | 0.708277 | 7.2:-84253352 | MS.gene057483:intron |
| TGATCTACAAGCACGCGGTG+TGG | 0.732227 | 7.2:+84256237 | None:intergenic |
| ACAGACCCTTTATCCCAAGG+AGG | 0.735615 | 7.2:-84252387 | MS.gene057483:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAACAATAATAATAATAA+CGG | + | chr7.2:84254882-84254901 | None:intergenic | 10.0% |
| !! | AAAACTAAGAAAAACATAAT+GGG | + | chr7.2:84253244-84253263 | None:intergenic | 15.0% |
| !! | AAAACTAATTCAAATTGAAT+TGG | + | chr7.2:84253509-84253528 | None:intergenic | 15.0% |
| !! | AATCAAGAAAAAAAAAAAAC+AGG | + | chr7.2:84255626-84255645 | None:intergenic | 15.0% |
| !!! | AAAATCATTTTGTTTTCAAA+AGG | - | chr7.2:84252955-84252974 | MS.gene057483:intron | 15.0% |
| !!! | GATTATGACATTTTTTTTTA+TGG | - | chr7.2:84254930-84254949 | MS.gene057483:intron | 15.0% |
| !!! | GTTTTTTTTTTTTCTTGATT+TGG | - | chr7.2:84255626-84255645 | MS.gene057483:CDS | 15.0% |
| !! | AAAAGTTCACTATAATTAAG+TGG | - | chr7.2:84255135-84255154 | MS.gene057483:intron | 20.0% |
| !! | ACATAACTTATAACATTCAT+AGG | + | chr7.2:84254508-84254527 | None:intergenic | 20.0% |
| !! | CAAAACTAAGAAAAACATAA+TGG | + | chr7.2:84253245-84253264 | None:intergenic | 20.0% |
| !! | TATTATATTTGTACAAGTTG+CGG | - | chr7.2:84253421-84253440 | MS.gene057483:CDS | 20.0% |
| !!! | AAAGTAAAAGTTAGCTTAAT+TGG | + | chr7.2:84253008-84253027 | None:intergenic | 20.0% |
| !!! | AAGAAGAGTTTTTTAAGAAT+CGG | - | chr7.2:84252491-84252510 | MS.gene057483:intron | 20.0% |
| !!! | AGAAAATCAACATTTTTCAA+GGG | - | chr7.2:84254436-84254455 | MS.gene057483:intron | 20.0% |
| !!! | GAAAATCAACTTTTTTCTAA+GGG | - | chr7.2:84253605-84253624 | MS.gene057483:CDS | 20.0% |
| !!! | GAAAATCAACTTTTTTTCAA+GGG | - | chr7.2:84253533-84253552 | MS.gene057483:intron | 20.0% |
| !!! | TCAATTTGAATTAGTTTTGA+TGG | - | chr7.2:84253511-84253530 | MS.gene057483:intron | 20.0% |
| !!! | TGAAAATCAACTTTTTTCTA+AGG | - | chr7.2:84253604-84253623 | MS.gene057483:CDS | 20.0% |
| ! | AAGAAGAAATCAAAAGATTG+CGG | - | chr7.2:84255966-84255985 | MS.gene057483:CDS | 25.0% |
| ! | AAGAGCTATTTGATTGAAAT+TGG | - | chr7.2:84253286-84253305 | MS.gene057483:intron | 25.0% |
| ! | AATGAAAACTTCAAAACTCT+TGG | + | chr7.2:84254703-84254722 | None:intergenic | 25.0% |
| ! | ACAACTACATTATCAATTTC+AGG | + | chr7.2:84252568-84252587 | None:intergenic | 25.0% |
| ! | AGAGCAATATAAATTGGAAA+AGG | - | chr7.2:84255825-84255844 | MS.gene057483:CDS | 25.0% |
| ! | ATAATTAAGTGGCATCTATA+TGG | - | chr7.2:84255146-84255165 | MS.gene057483:intron | 25.0% |
| ! | ATTCATCAGCATTTAATGAA+AGG | + | chr7.2:84255919-84255938 | None:intergenic | 25.0% |
| ! | CATGAACTTAAAAATGCAAA+TGG | + | chr7.2:84255575-84255594 | None:intergenic | 25.0% |
| ! | CTTCATAGAGCAATATAAAT+TGG | - | chr7.2:84255819-84255838 | MS.gene057483:CDS | 25.0% |
| ! | GTAATTGTAAAGAGAAGAAT+AGG | - | chr7.2:84252428-84252447 | MS.gene057483:CDS | 25.0% |
| ! | TAGGAACTTAAAAATGCAAA+TGG | + | chr7.2:84255657-84255676 | None:intergenic | 25.0% |
| ! | TCAAATCAATACCAAATACT+TGG | + | chr7.2:84253165-84253184 | None:intergenic | 25.0% |
| ! | TCTATTGCTATAATGATATG+AGG | - | chr7.2:84255172-84255191 | MS.gene057483:intron | 25.0% |
| ! | TGTGTATCAATTGTCATAAA+TGG | - | chr7.2:84253353-84253372 | MS.gene057483:CDS | 25.0% |
| ! | TTATGAAATATGTGAGTTGT+AGG | - | chr7.2:84255741-84255760 | MS.gene057483:CDS | 25.0% |
| ! | TTGTAAGTGATGTCTATTAA+TGG | - | chr7.2:84253049-84253068 | MS.gene057483:intron | 25.0% |
| ! | TTGTGTTTAATCCAAGTATT+TGG | - | chr7.2:84253151-84253170 | MS.gene057483:CDS | 25.0% |
| !! | ACAGAATATCAACTCTTTTA+AGG | - | chr7.2:84253663-84253682 | MS.gene057483:CDS | 25.0% |
| !! | AGTATTGAAAAAGTACAACA+AGG | + | chr7.2:84255514-84255533 | None:intergenic | 25.0% |
| !! | CAGAAAATCAACATTTTTCA+AGG | - | chr7.2:84254435-84254454 | MS.gene057483:intron | 25.0% |
| !! | CAGAATATCAACTCTTTTAA+GGG | - | chr7.2:84253664-84253683 | MS.gene057483:CDS | 25.0% |
| !! | TTCTGAAGAGAAATCTAATA+AGG | + | chr7.2:84256109-84256128 | None:intergenic | 25.0% |
| !!! | AGAAGAGTTTTTTAAGAATC+GGG | - | chr7.2:84252492-84252511 | MS.gene057483:intron | 25.0% |
| !!! | ATTTGCATTTTTAAGTTCCT+AGG | - | chr7.2:84255656-84255675 | MS.gene057483:CDS | 25.0% |
| !!! | GAAAATCAACTTTTTTCCAA+GGG | - | chr7.2:84253869-84253888 | MS.gene057483:intron | 25.0% |
| !!! | GGAAAATCAACTTTTTTTCA+AGG | - | chr7.2:84253532-84253551 | MS.gene057483:intron | 25.0% |
| !!! | GTATTTGGTATTGATTTGAT+TGG | - | chr7.2:84253166-84253185 | MS.gene057483:CDS | 25.0% |
| !!! | TATAGTGAACTTTTGAGTTT+TGG | + | chr7.2:84255129-84255148 | None:intergenic | 25.0% |
| !!! | TGAAAATCAACTTTTTTCCA+AGG | - | chr7.2:84253868-84253887 | MS.gene057483:intron | 25.0% |
| !!! | TTTGCATTTTTAAGTTCCTA+GGG | - | chr7.2:84255657-84255676 | MS.gene057483:CDS | 25.0% |
| ACACAATATGAAACCTTCTA+TGG | + | chr7.2:84253137-84253156 | None:intergenic | 30.0% | |
| ACTCACTTATTCATGACAAT+TGG | + | chr7.2:84254215-84254234 | None:intergenic | 30.0% | |
| AGTTGTTGAAAAACAGAAAG+AGG | - | chr7.2:84252582-84252601 | MS.gene057483:CDS | 30.0% | |
| ATGAATATTGAATGAGTGCT+AGG | - | chr7.2:84253074-84253093 | MS.gene057483:intron | 30.0% | |
| ATTAATGTAGCAAAGAGGAA+AGG | - | chr7.2:84254956-84254975 | MS.gene057483:intron | 30.0% | |
| ATTCTTGTATCCACTAAAGT+TGG | - | chr7.2:84255937-84255956 | MS.gene057483:CDS | 30.0% | |
| CTAAACGCTTGATTAAGAAA+AGG | + | chr7.2:84254108-84254127 | None:intergenic | 30.0% | |
| CTTCATAGACTAATGAATAG+TGG | - | chr7.2:84255699-84255718 | MS.gene057483:CDS | 30.0% | |
| CTTGACTCTTTCTCAAATTA+CGG | + | chr7.2:84252474-84252493 | None:intergenic | 30.0% | |
| GCCAAATCAAGAAAAAACAA+AGG | + | chr7.2:84255548-84255567 | None:intergenic | 30.0% | |
| GGAATATTAATGTAGCAAAG+AGG | - | chr7.2:84254951-84254970 | MS.gene057483:intron | 30.0% | |
| GGAGAAAATGAAGATAAAAG+AGG | + | chr7.2:84255332-84255351 | None:intergenic | 30.0% | |
| GGTATTGTAATTTCTTTGAC+CGG | + | chr7.2:84255245-84255264 | None:intergenic | 30.0% | |
| GTAGCTAAAATTATATCCCT+AGG | + | chr7.2:84255436-84255455 | None:intergenic | 30.0% | |
| GTTGTTGAAAAACAGAAAGA+GGG | - | chr7.2:84252583-84252602 | MS.gene057483:CDS | 30.0% | |
| TAGTAAGTGAGTGCTAATTT+CGG | - | chr7.2:84254033-84254052 | MS.gene057483:intron | 30.0% | |
| TTGACCTTCTTATGAAACTT+GGG | + | chr7.2:84256198-84256217 | None:intergenic | 30.0% | |
| TTTACATTCTCAGTGTGTTT+GGG | + | chr7.2:84252223-84252242 | None:intergenic | 30.0% | |
| TTTGTTTGAACCTAAGAATG+AGG | - | chr7.2:84252729-84252748 | MS.gene057483:intron | 30.0% | |
| ! | AAAAAGTACAAGAAGAAGGA+AGG | + | chr7.2:84255353-84255372 | None:intergenic | 30.0% |
| ! | ATTGAAAAAGTACAACAAGG+AGG | + | chr7.2:84255511-84255530 | None:intergenic | 30.0% |
| ! | CTTTTCATTACGTAGCAAAA+CGG | + | chr7.2:84255095-84255114 | None:intergenic | 30.0% |
| ! | GACAAATCAACTCTTTTCAA+GGG | - | chr7.2:84254372-84254391 | MS.gene057483:intron | 30.0% |
| ! | GAGAAAATCAACTGTTTTCA+AGG | - | chr7.2:84253195-84253214 | MS.gene057483:intron | 30.0% |
| ! | GCACTACTATTTGCATTTTA+AGG | - | chr7.2:84255409-84255428 | MS.gene057483:intron | 30.0% |
| ! | GTTGAAAAAGTACAAGAAGA+AGG | + | chr7.2:84255357-84255376 | None:intergenic | 30.0% |
| ! | TGACAAATCAACTCTTTTCA+AGG | - | chr7.2:84254371-84254390 | MS.gene057483:intron | 30.0% |
| !! | AGAAGAGGTATTTGAACAAA+AGG | - | chr7.2:84254983-84255002 | MS.gene057483:intron | 30.0% |
| !! | TGAGGTATTTGACATTCTTT+TGG | - | chr7.2:84255190-84255209 | MS.gene057483:intron | 30.0% |
| !!! | ACTTTTTTCTAAGGGCTATT+TGG | - | chr7.2:84253613-84253632 | MS.gene057483:CDS | 30.0% |
| !!! | ACTTTTTTTCAAGGGCTATT+TGG | - | chr7.2:84253541-84253560 | MS.gene057483:intron | 30.0% |
| !!! | AGGTTTCTGTGATTTTTTGA+CGG | + | chr7.2:84252269-84252288 | None:intergenic | 30.0% |
| !!! | ATTTGCATTTTAAGGTCCTA+GGG | - | chr7.2:84255417-84255436 | MS.gene057483:intron | 30.0% |
| !!! | ATTTTGGTTTGAGGAGAATT+GGG | + | chr7.2:84252316-84252335 | None:intergenic | 30.0% |
| !!! | CAAGCGTTTAGTTTTGATTA+GGG | - | chr7.2:84254117-84254136 | MS.gene057483:intron | 30.0% |
| !!! | CAAGTGTTTAGTTTTGATGA+GGG | - | chr7.2:84254307-84254326 | MS.gene057483:intron | 30.0% |
| !!! | GCCTTTGTTTTTTCTTGATT+TGG | - | chr7.2:84255544-84255563 | MS.gene057483:CDS | 30.0% |
| !!! | TATTTGCATTTTAAGGTCCT+AGG | - | chr7.2:84255416-84255435 | MS.gene057483:intron | 30.0% |
| !!! | TCAAGCGTTTAGTTTTGATT+AGG | - | chr7.2:84254116-84254135 | MS.gene057483:intron | 30.0% |
| !!! | TCAAGTGCTTAGTTTTGATA+AGG | - | chr7.2:84253460-84253479 | MS.gene057483:intron | 30.0% |
| !!! | TCAAGTGTTTAGTTTTGATG+AGG | - | chr7.2:84254306-84254325 | MS.gene057483:intron | 30.0% |
| !!! | TCTGGTTTTGATTAGTTTTG+TGG | - | chr7.2:84252929-84252948 | MS.gene057483:intron | 30.0% |
| AAGAGGAAAGGTTAAAGAAG+AGG | - | chr7.2:84254968-84254987 | MS.gene057483:intron | 35.0% | |
| AATTGCAGCTTGACATCTAA+AGG | - | chr7.2:84254600-84254619 | MS.gene057483:intron | 35.0% | |
| AGAAATCAAAAGATTGCGGA+AGG | - | chr7.2:84255970-84255989 | MS.gene057483:CDS | 35.0% | |
| AGACAGAAGAAGAGAAACAA+AGG | - | chr7.2:84255018-84255037 | MS.gene057483:intron | 35.0% | |
| ATAAAGGGTCTGTCGAAATA+TGG | + | chr7.2:84256022-84256041 | None:intergenic | 35.0% | |
| ATGACTCAGTCTCTTCTTAT+AGG | - | chr7.2:84253103-84253122 | MS.gene057483:intron | 35.0% | |
| ATTCTCCTCAAACCAAAATC+CGG | - | chr7.2:84252317-84252336 | MS.gene057483:intron | 35.0% | |
| ATTGTAATTTCTTTGACCGG+AGG | + | chr7.2:84255242-84255261 | None:intergenic | 35.0% | |
| CATAATCCAAACGAAGTCTT+TGG | + | chr7.2:84254917-84254936 | None:intergenic | 35.0% | |
| CTTGACCTTCTTATGAAACT+TGG | + | chr7.2:84256199-84256218 | None:intergenic | 35.0% | |
| GCCAGATCAAGAAAAAACAT+AGG | + | chr7.2:84255391-84255410 | None:intergenic | 35.0% | |
| GTTTACATTCTCAGTGTGTT+TGG | + | chr7.2:84252224-84252243 | None:intergenic | 35.0% | |
| GTTTATCCAAAGACTTCGTT+TGG | - | chr7.2:84254908-84254927 | MS.gene057483:intron | 35.0% | |
| TGAATGTTGAATTGTGCAGA+TGG | - | chr7.2:84255783-84255802 | MS.gene057483:CDS | 35.0% | |
| TGACCTTCTTATGAAACTTG+GGG | + | chr7.2:84256197-84256216 | None:intergenic | 35.0% | |
| TGACTCAGTCTCTTCTTATA+GGG | - | chr7.2:84253104-84253123 | MS.gene057483:intron | 35.0% | |
| TTTGAGGAGAATTGGGATTA+GGG | + | chr7.2:84252309-84252328 | None:intergenic | 35.0% | |
| ! | AGAGAGAATGATGATGTTTC+TGG | - | chr7.2:84252781-84252800 | MS.gene057483:intron | 35.0% |
| ! | TGCTTCTGTTTCTTCTTCTT+GGG | - | chr7.2:84252864-84252883 | MS.gene057483:intron | 35.0% |
| ! | TTATGAAACTTGGGGGTTTT+GGG | + | chr7.2:84256189-84256208 | None:intergenic | 35.0% |
| ! | TTTTGACGTCTCAGAATCTT+GGG | - | chr7.2:84252830-84252849 | MS.gene057483:intron | 35.0% |
| !! | AACAAGAAGGAGGAGTATTA+GGG | + | chr7.2:84252246-84252265 | None:intergenic | 35.0% |
| !! | AGAGAGAGTGTTACACAAAT+TGG | - | chr7.2:84252664-84252683 | MS.gene057483:intron | 35.0% |
| !! | ATTTTGACGTCTCAGAATCT+TGG | - | chr7.2:84252829-84252848 | MS.gene057483:intron | 35.0% |
| !! | CAACTCTTTTAAGGGCTATT+TGG | - | chr7.2:84253672-84253691 | MS.gene057483:CDS | 35.0% |
| !! | GAGAGAGTGTTACACAAATT+GGG | - | chr7.2:84252665-84252684 | MS.gene057483:intron | 35.0% |
| !!! | ACTTTTTTCCAAGGGCTATT+TGG | - | chr7.2:84253877-84253896 | MS.gene057483:intron | 35.0% |
| !!! | GATTTTGGTTTGAGGAGAAT+TGG | + | chr7.2:84252317-84252336 | None:intergenic | 35.0% |
| !!! | GATTTTTTGACGGAACAAGA+AGG | + | chr7.2:84252259-84252278 | None:intergenic | 35.0% |
| !!! | GCCTATGTTTTTTCTTGATC+TGG | - | chr7.2:84255387-84255406 | MS.gene057483:intron | 35.0% |
| AAAACAGAAAGAGGGTGATG+TGG | - | chr7.2:84252591-84252610 | MS.gene057483:CDS | 40.0% | |
| AAACAGAAAGAGGGTGATGT+GGG | - | chr7.2:84252592-84252611 | MS.gene057483:CDS | 40.0% | |
| AACCCCCAAGTTTCATAAGA+AGG | - | chr7.2:84256191-84256210 | MS.gene057483:CDS | 40.0% | |
| AATCAACAACCACCACTCTT+GGG | - | chr7.2:84254743-84254762 | MS.gene057483:intron | 40.0% | |
| AATTGCAACCAAATAGCCCT+TGG | + | chr7.2:84253624-84253643 | None:intergenic | 40.0% | |
| ACATCAGTTCGAAGCTTGAA+AGG | + | chr7.2:84254817-84254836 | None:intergenic | 40.0% | |
| AGAAGGAAGATGTGAAGGAA+GGG | - | chr7.2:84252374-84252393 | MS.gene057483:intron | 40.0% | |
| AGAGAAGTAGAGAGAGATTG+AGG | - | chr7.2:84252632-84252651 | MS.gene057483:intron | 40.0% | |
| AGTGTTACACAAATTGGGTC+AGG | - | chr7.2:84252670-84252689 | MS.gene057483:intron | 40.0% | |
| ATAGGGATAGCAACCATAGA+AGG | - | chr7.2:84253121-84253140 | MS.gene057483:CDS | 40.0% | |
| CACTAATTCGCCATGTTTCT+GGG | - | chr7.2:84255890-84255909 | MS.gene057483:CDS | 40.0% | |
| CCAGAACACTAGAGATTAAC+CGG | + | chr7.2:84252914-84252933 | None:intergenic | 40.0% | |
| CCATCTTCATCCTCATTCTT+AGG | + | chr7.2:84252742-84252761 | None:intergenic | 40.0% | |
| CCTAAGAATGAGGATGAAGA+TGG | - | chr7.2:84252739-84252758 | MS.gene057483:intron | 40.0% | |
| CGAAGGAAATTCGTTGTTGT+GGG | - | chr7.2:84252340-84252359 | MS.gene057483:intron | 40.0% | |
| GAAACAGAAGGAAGATGTGA+AGG | - | chr7.2:84252369-84252388 | MS.gene057483:intron | 40.0% | |
| GAAGGAAATTCGTTGTTGTG+GGG | - | chr7.2:84252341-84252360 | MS.gene057483:intron | 40.0% | |
| GAAGGTTCAGAGTTTGGTTA+AGG | - | chr7.2:84252693-84252712 | MS.gene057483:intron | 40.0% | |
| GACCTTCTTATGAAACTTGG+GGG | + | chr7.2:84256196-84256215 | None:intergenic | 40.0% | |
| GAGAAGTAGAGAGAGATTGA+GGG | - | chr7.2:84252633-84252652 | MS.gene057483:intron | 40.0% | |
| GAGAATTGGGATTAGGGTTA+GGG | + | chr7.2:84252303-84252322 | None:intergenic | 40.0% | |
| GGTGCTAATGTTACAGTGTT+TGG | - | chr7.2:84255211-84255230 | MS.gene057483:intron | 40.0% | |
| GTGTTACACAAATTGGGTCA+GGG | - | chr7.2:84252671-84252690 | MS.gene057483:intron | 40.0% | |
| GTTTGAGGAGAATTGGGATT+AGG | + | chr7.2:84252310-84252329 | None:intergenic | 40.0% | |
| TAAGAAGAGACTGAGTCATG+TGG | + | chr7.2:84253102-84253121 | None:intergenic | 40.0% | |
| TCACTAATTCGCCATGTTTC+TGG | - | chr7.2:84255889-84255908 | MS.gene057483:CDS | 40.0% | |
| TCTTCTTCAGCCAACTTTAG+TGG | + | chr7.2:84255950-84255969 | None:intergenic | 40.0% | |
| TGAAAGGAAACCCAGAAACA+TGG | + | chr7.2:84255903-84255922 | None:intergenic | 40.0% | |
| TGAAGATGGAAAAGAGGAGA+AGG | - | chr7.2:84252753-84252772 | MS.gene057483:intron | 40.0% | |
| TGAAGCTTCATACTGATGTG+CGG | - | chr7.2:84255273-84255292 | MS.gene057483:intron | 40.0% | |
| TGAGGATGAAGATGGAAAAG+AGG | - | chr7.2:84252747-84252766 | MS.gene057483:intron | 40.0% | |
| ! | CTTATGAAACTTGGGGGTTT+TGG | + | chr7.2:84256190-84256209 | None:intergenic | 40.0% |
| ! | GTGCTTCTGTTTCTTCTTCT+TGG | - | chr7.2:84252863-84252882 | MS.gene057483:intron | 40.0% |
| ! | TATGGCATAGGTTGTGCTTT+TGG | + | chr7.2:84256004-84256023 | None:intergenic | 40.0% |
| ! | TCTGTTTCTTCTTCTTGGGA+TGG | - | chr7.2:84252868-84252887 | MS.gene057483:intron | 40.0% |
| ! | TTTTTGACGGAACAAGAAGG+AGG | + | chr7.2:84252256-84252275 | None:intergenic | 40.0% |
| !! | GAACAAGAAGGAGGAGTATT+AGG | + | chr7.2:84252247-84252266 | None:intergenic | 40.0% |
| !!! | AGTGAGTGCTATTTTCAGTG+TGG | - | chr7.2:84253378-84253397 | MS.gene057483:CDS | 40.0% |
| AAAGAGGGTGATGTGGGTTT+GGG | - | chr7.2:84252598-84252617 | MS.gene057483:CDS | 45.0% | |
| AAGGAAGATGTGAAGGAAGG+GGG | - | chr7.2:84252376-84252395 | MS.gene057483:intron | 45.0% | |
| ACAGTGTTTGGCAAAACCTC+CGG | - | chr7.2:84255223-84255242 | MS.gene057483:intron | 45.0% | |
| AGAAGCAGCAAAAAGTCACC+CGG | - | chr7.2:84254785-84254804 | MS.gene057483:intron | 45.0% | |
| AGATCAATCCTCACCTCCTT+GGG | + | chr7.2:84256045-84256064 | None:intergenic | 45.0% | |
| ATCAACAACCACCACTCTTG+GGG | - | chr7.2:84254744-84254763 | MS.gene057483:intron | 45.0% | |
| CAAAGGATTCCTGTTGCACA+AGG | - | chr7.2:84255035-84255054 | MS.gene057483:intron | 45.0% | |
| CAACAACGAATTTCCTTCGC+CGG | + | chr7.2:84252339-84252358 | None:intergenic | 45.0% | |
| CAGAAGGAAGATGTGAAGGA+AGG | - | chr7.2:84252373-84252392 | MS.gene057483:intron | 45.0% | |
| CCGGTTAATCTCTAGTGTTC+TGG | - | chr7.2:84252911-84252930 | MS.gene057483:intron | 45.0% | |
| CTAAAGGAGGTAGAAGTAGC+AGG | - | chr7.2:84254616-84254635 | MS.gene057483:intron | 45.0% | |
| GAAGCTTCATACTGATGTGC+GGG | - | chr7.2:84255274-84255293 | MS.gene057483:intron | 45.0% | |
| GAAGGAAGATGTGAAGGAAG+GGG | - | chr7.2:84252375-84252394 | MS.gene057483:intron | 45.0% | |
| GAATCAACAACCACCACTCT+TGG | - | chr7.2:84254742-84254761 | MS.gene057483:intron | 45.0% | |
| GCACATCAGTATGAAGCTTC+AGG | + | chr7.2:84255274-84255293 | None:intergenic | 45.0% | |
| GCGAAGGAAATTCGTTGTTG+TGG | - | chr7.2:84252339-84252358 | MS.gene057483:intron | 45.0% | |
| GGAAAAGGAGAGACAACAGA+AGG | - | chr7.2:84255840-84255859 | MS.gene057483:CDS | 45.0% | |
| GGAGAATTGGGATTAGGGTT+AGG | + | chr7.2:84252304-84252323 | None:intergenic | 45.0% | |
| GGCTATTTGGTTGCAAGTTG+CGG | - | chr7.2:84253685-84253704 | MS.gene057483:intron | 45.0% | |
| GGTCTGTCGAAATATGGCAT+AGG | + | chr7.2:84256016-84256035 | None:intergenic | 45.0% | |
| GTATGAAGCTTCAGGTCAAC+AGG | + | chr7.2:84255266-84255285 | None:intergenic | 45.0% | |
| GTTCGAAGCTTGAAAGGTTC+TGG | + | chr7.2:84254811-84254830 | None:intergenic | 45.0% | |
| TACACAAATTGGGTCAGGGA+AGG | - | chr7.2:84252675-84252694 | MS.gene057483:intron | 45.0% | |
| TAGAGAGAGATTGAGGGAAG+AGG | - | chr7.2:84252639-84252658 | MS.gene057483:intron | 45.0% | |
| TAGATCAATCCTCACCTCCT+TGG | + | chr7.2:84256046-84256065 | None:intergenic | 45.0% | |
| TAGCAAAACGGTCTTACCTC+AGG | + | chr7.2:84255083-84255102 | None:intergenic | 45.0% | |
| TCAGGTTCATCTGTTGTCCA+AGG | + | chr7.2:84255065-84255084 | None:intergenic | 45.0% | |
| TCTCGTGGAAGGTTTGATTC+CGG | - | chr7.2:84252892-84252911 | MS.gene057483:intron | 45.0% | |
| TGCAGCTTGACATCTAAAGG+AGG | - | chr7.2:84254603-84254622 | MS.gene057483:intron | 45.0% | |
| TGGGATTAGGGTTAGGGTTA+GGG | + | chr7.2:84252297-84252316 | None:intergenic | 45.0% | |
| TGTGGGGAAGAAGAAACAGA+AGG | - | chr7.2:84252357-84252376 | MS.gene057483:intron | 45.0% | |
| TTGGACAACAGATGAACCTG+AGG | - | chr7.2:84255064-84255083 | MS.gene057483:intron | 45.0% | |
| TTGGGATTAGGGTTAGGGTT+AGG | + | chr7.2:84252298-84252317 | None:intergenic | 45.0% | |
| ! | CTTGATGATCTACAAGCACG+CGG | + | chr7.2:84252187-84252206 | None:intergenic | 45.0% |
| ! | GAAGAAGAAACAGAAGCACG+CGG | + | chr7.2:84252862-84252881 | None:intergenic | 45.0% |
| ! | GAATTTCCTTCGCCGGATTT+TGG | + | chr7.2:84252332-84252351 | None:intergenic | 45.0% |
| ! | GTCAAACTGCTACTTGTACG+AGG | + | chr7.2:84254276-84254295 | None:intergenic | 45.0% |
| !! | TGGTTCGTCGTTTTGTGCTT+CGG | - | chr7.2:84252801-84252820 | MS.gene057483:intron | 45.0% |
| !!! | AAACTTGGGGGTTTTGGGTA+GGG | + | chr7.2:84256184-84256203 | None:intergenic | 45.0% |
| ACAGACCCTTTATCCCAAGG+AGG | - | chr7.2:84256029-84256048 | MS.gene057483:CDS | 50.0% | |
| CAAGGAAGACCTTGTGCAAC+AGG | + | chr7.2:84255047-84255066 | None:intergenic | 50.0% | |
| CCTCACCTCCTTGGGATAAA+GGG | + | chr7.2:84256037-84256056 | None:intergenic | 50.0% | |
| CCTGCTCATCAAACTCAGCA+CGG | + | chr7.2:84255307-84255326 | None:intergenic | 50.0% | |
| CTCAAACCAAAATCCGGCGA+AGG | - | chr7.2:84252323-84252342 | MS.gene057483:intron | 50.0% | |
| CTGTTGCACAAGGTCTTCCT+TGG | - | chr7.2:84255045-84255064 | MS.gene057483:intron | 50.0% | |
| GAAAGAGGGTGATGTGGGTT+TGG | - | chr7.2:84252597-84252616 | MS.gene057483:CDS | 50.0% | |
| GACGTCTCAGAATCTTGGGT+TGG | - | chr7.2:84252834-84252853 | MS.gene057483:intron | 50.0% | |
| GGGTTAGGGTTAGGGTTGTT+AGG | + | chr7.2:84252289-84252308 | None:intergenic | 50.0% | |
| GTCAGGGAAGGTTCAGAGTT+TGG | - | chr7.2:84252687-84252706 | MS.gene057483:intron | 50.0% | |
| TCAACAACCACCACTCTTGG+GGG | - | chr7.2:84254745-84254764 | MS.gene057483:intron | 50.0% | |
| TCCTCACCTCCTTGGGATAA+AGG | + | chr7.2:84256038-84256057 | None:intergenic | 50.0% | |
| TCGACAGACCCTTTATCCCA+AGG | - | chr7.2:84256026-84256045 | MS.gene057483:CDS | 50.0% | |
| TCTTCTTGGGATGGATCTCG+TGG | - | chr7.2:84252877-84252896 | MS.gene057483:intron | 50.0% | |
| ! | AAGCTTGAAAGGTTCTGGCC+GGG | + | chr7.2:84254806-84254825 | None:intergenic | 50.0% |
| ! | AGTTGAGGCAGGAGGAGTTT+TGG | + | chr7.2:84256263-84256282 | None:intergenic | 50.0% |
| ! | GAAGCTTGAAAGGTTCTGGC+CGG | + | chr7.2:84254807-84254826 | None:intergenic | 50.0% |
| !! | AGGGGGTGATGATGGTGATT+CGG | - | chr7.2:84252393-84252412 | MS.gene057483:CDS | 50.0% |
| !!! | CTTCGCCGGATTTTGGTTTG+AGG | + | chr7.2:84252325-84252344 | None:intergenic | 50.0% |
| !!! | GAAACTTGGGGGTTTTGGGT+AGG | + | chr7.2:84256185-84256204 | None:intergenic | 50.0% |
| CCCTTTATCCCAAGGAGGTG+AGG | - | chr7.2:84256034-84256053 | MS.gene057483:CDS | 55.0% | |
| CCGTGCTGAGTTTGATGAGC+AGG | - | chr7.2:84255304-84255323 | MS.gene057483:intron | 55.0% | |
| CTTGGGATGGATCTCGTGGA+AGG | - | chr7.2:84252881-84252900 | MS.gene057483:intron | 55.0% | |
| GTGAAGGAAGGGGGTGATGA+TGG | - | chr7.2:84252385-84252404 | MS.gene057483:intron | 55.0% | |
| TGATCTACAAGCACGCGGTG+TGG | + | chr7.2:84252182-84252201 | None:intergenic | 55.0% | |
| !! | GGGGGTGATGATGGTGATTC+GGG | - | chr7.2:84252394-84252413 | MS.gene057483:CDS | 55.0% |
| !!! | TTGGGGGTTTTGGGTAGGGT+AGG | + | chr7.2:84256180-84256199 | None:intergenic | 55.0% |
| ACAACCACCACTCTTGGGGG+AGG | - | chr7.2:84254748-84254767 | MS.gene057483:intron | 60.0% | |
| AGCACGCGGTGTGGTTGTTC+CGG | + | chr7.2:84252173-84252192 | None:intergenic | 60.0% | |
| CAACCACCACTCTTGGGGGA+GGG | - | chr7.2:84254749-84254768 | MS.gene057483:intron | 60.0% | |
| GCAGCAGCAGCTCATCGACA+TGG | - | chr7.2:84256226-84256245 | MS.gene057483:CDS | 60.0% | |
| TCATACTGATGTGCGGGCGC+TGG | - | chr7.2:84255280-84255299 | MS.gene057483:intron | 60.0% | |
| CCACTCTTGGGGGAGGGAGA+AGG | - | chr7.2:84254755-84254774 | MS.gene057483:intron | 65.0% | |
| CCTTCTCCCTCCCCCAAGAG+TGG | + | chr7.2:84254758-84254777 | None:intergenic | 65.0% | |
| TCTCCCTCCCCCAAGAGTGG+TGG | + | chr7.2:84254755-84254774 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 84252154 | 84256284 | 84252154 | ID=MS.gene057483 |
| chr7.2 | mRNA | 84252154 | 84256284 | 84252154 | ID=MS.gene057483.t1;Parent=MS.gene057483 |
| chr7.2 | exon | 84255536 | 84256284 | 84255536 | ID=MS.gene057483.t1.exon1;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84255536 | 84256284 | 84255536 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84253794 | 84253830 | 84253794 | ID=MS.gene057483.t1.exon2;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84253794 | 84253830 | 84253794 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84253604 | 84253702 | 84253604 | ID=MS.gene057483.t1.exon3;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84253604 | 84253702 | 84253604 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84253353 | 84253472 | 84253353 | ID=MS.gene057483.t1.exon4;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84253353 | 84253472 | 84253353 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84253113 | 84253211 | 84253113 | ID=MS.gene057483.t1.exon5;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84253113 | 84253211 | 84253113 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84252577 | 84252636 | 84252577 | ID=MS.gene057483.t1.exon6;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84252577 | 84252636 | 84252577 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84252388 | 84252482 | 84252388 | ID=MS.gene057483.t1.exon7;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84252388 | 84252482 | 84252388 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| chr7.2 | exon | 84252154 | 84252274 | 84252154 | ID=MS.gene057483.t1.exon8;Parent=MS.gene057483.t1 |
| chr7.2 | CDS | 84252154 | 84252274 | 84252154 | ID=cds.MS.gene057483.t1;Parent=MS.gene057483.t1 |
| Gene Sequence |
| Protein sequence |
