Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064724.t1 | XP_024635479.1 | 94.9 | 867 | 24 | 2 | 1 | 867 | 1 | 847 | 0.00E+00 | 1538.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064724.t1 | Q96EZ8 | 30.1 | 183 | 117 | 2 | 689 | 862 | 266 | 446 | 3.0e-13 | 79.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064724.t1 | G7J4N3 | 94.7 | 867 | 24 | 3 | 1 | 867 | 1 | 845 | 0.0e+00 | 1530.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050170 | MS.gene064724 | -0.821238 | 4.49E-53 | -1.69E-46 |
MS.gene050868 | MS.gene064724 | -0.816021 | 6.85E-52 | -1.69E-46 |
MS.gene050871 | MS.gene064724 | -0.816447 | 5.50E-52 | -1.69E-46 |
MS.gene050875 | MS.gene064724 | 0.819693 | 1.02E-52 | -1.69E-46 |
MS.gene054633 | MS.gene064724 | 0.813116 | 3.01E-51 | -1.69E-46 |
MS.gene054662 | MS.gene064724 | 0.816848 | 4.48E-52 | -1.69E-46 |
MS.gene05589 | MS.gene064724 | -0.808985 | 2.37E-50 | -1.69E-46 |
MS.gene056040 | MS.gene064724 | -0.814926 | 1.20E-51 | -1.69E-46 |
MS.gene056387 | MS.gene064724 | -0.801674 | 8.05E-49 | -1.69E-46 |
MS.gene057367 | MS.gene064724 | 0.814684 | 1.36E-51 | -1.69E-46 |
MS.gene05996 | MS.gene064724 | -0.801995 | 6.92E-49 | -1.69E-46 |
MS.gene06000 | MS.gene064724 | -0.842544 | 2.42E-58 | -1.69E-46 |
MS.gene06080 | MS.gene064724 | 0.843631 | 1.24E-58 | -1.69E-46 |
MS.gene060982 | MS.gene064724 | -0.803603 | 3.22E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064724.t1 | MTR_3g113050 | 94.579 | 867 | 25 | 3 | 1 | 867 | 1 | 845 | 0.0 | 1674 |
MS.gene064724.t1 | MTR_8g076470 | 31.500 | 600 | 315 | 22 | 300 | 867 | 199 | 734 | 1.44e-52 | 196 |
MS.gene064724.t1 | MTR_8g076470 | 42.424 | 132 | 65 | 4 | 1 | 125 | 1 | 128 | 4.25e-19 | 93.2 |
MS.gene064724.t1 | MTR_8g076570 | 42.446 | 278 | 137 | 8 | 607 | 867 | 526 | 797 | 6.91e-49 | 186 |
MS.gene064724.t1 | MTR_8g076470 | 28.571 | 511 | 270 | 19 | 300 | 779 | 199 | 645 | 2.08e-25 | 112 |
MS.gene064724.t1 | MTR_8g076470 | 42.424 | 132 | 65 | 4 | 1 | 125 | 1 | 128 | 2.84e-19 | 93.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064724.t1 | AT3G54350 | 36.266 | 557 | 267 | 16 | 315 | 866 | 219 | 692 | 5.78e-78 | 268 |
MS.gene064724.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.17e-31 | 132 |
MS.gene064724.t1 | AT3G54350 | 36.266 | 557 | 267 | 16 | 315 | 866 | 219 | 692 | 5.78e-78 | 268 |
MS.gene064724.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.17e-31 | 132 |
MS.gene064724.t1 | AT3G54350 | 36.266 | 557 | 267 | 16 | 315 | 866 | 219 | 692 | 5.78e-78 | 268 |
MS.gene064724.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.17e-31 | 132 |
MS.gene064724.t1 | AT3G54350 | 36.266 | 557 | 267 | 16 | 315 | 866 | 219 | 692 | 5.78e-78 | 268 |
MS.gene064724.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.17e-31 | 132 |
MS.gene064724.t1 | AT3G54350 | 36.266 | 557 | 267 | 16 | 315 | 866 | 219 | 692 | 5.78e-78 | 268 |
MS.gene064724.t1 | AT3G54350 | 40.331 | 181 | 80 | 4 | 1 | 181 | 1 | 153 | 2.17e-31 | 132 |
MS.gene064724.t1 | AT1G75530 | 52.601 | 173 | 80 | 2 | 695 | 867 | 378 | 548 | 8.87e-48 | 179 |
MS.gene064724.t1 | AT1G75530 | 38.655 | 119 | 55 | 3 | 14 | 132 | 5 | 105 | 2.27e-15 | 80.5 |
MS.gene064724.t1 | AT1G60700 | 38.378 | 185 | 100 | 3 | 682 | 865 | 332 | 503 | 5.09e-33 | 135 |
MS.gene064724.t1 | AT1G60700 | 40.000 | 130 | 64 | 3 | 682 | 810 | 332 | 448 | 2.16e-20 | 95.9 |
Find 169 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATCAAAGTTCTTCAAAAT+TGG | 0.145974 | 3.4:+97554397 | MS.gene064724:CDS |
CTACATCCCGTTCCTGTTTC+AGG | 0.165368 | 3.4:-97556094 | None:intergenic |
AACTCTACTTCAGCCATTTC+AGG | 0.207699 | 3.4:-97555276 | None:intergenic |
AGTGGGGTCCGCAGATGTTC+TGG | 0.213381 | 3.4:+97556154 | MS.gene064724:CDS |
AATGATAATTATGTGGTAAA+TGG | 0.230760 | 3.4:+97554559 | MS.gene064724:CDS |
TTATACCTCAATCAGATAAT+TGG | 0.264389 | 3.4:-97558292 | None:intergenic |
CCTCCTCAGGTATATTGTTT+TGG | 0.267136 | 3.4:-97554759 | None:intergenic |
CTTCCTACAGGTACTTGATA+TGG | 0.281187 | 3.4:+97556361 | MS.gene064724:intron |
CCATCATCTGGTAATGATTA+TGG | 0.283144 | 3.4:+97555696 | MS.gene064724:CDS |
GCCTTTGATGCACATGTTAA+AGG | 0.285501 | 3.4:+97555396 | MS.gene064724:CDS |
AGATGATGGAACTGGTATAT+TGG | 0.287606 | 3.4:-97555682 | None:intergenic |
TTGAGTGGCGACCATATAAT+AGG | 0.290825 | 3.4:-97557278 | None:intergenic |
GTTATCACTTCCTGACATTC+AGG | 0.301168 | 3.4:+97555014 | MS.gene064724:CDS |
ACGGGAGCCCATTGCCTTCC+AGG | 0.307560 | 3.4:+97555801 | MS.gene064724:CDS |
TTACTAAACTCTCCAATTGA+TGG | 0.323717 | 3.4:+97555237 | MS.gene064724:CDS |
TGCTTGCGAGGATGGTTATC+TGG | 0.327115 | 3.4:+97555101 | MS.gene064724:CDS |
ACAACTCCGTTAATTAGTTC+AGG | 0.344801 | 3.4:-97555543 | None:intergenic |
TCATCATTGGATGGAACTTC+CGG | 0.350267 | 3.4:-97555591 | None:intergenic |
GATGATGGAACTGGTATATT+GGG | 0.354956 | 3.4:-97555681 | None:intergenic |
AACTCGGAGCACAAATTTGC+AGG | 0.358484 | 3.4:-97554928 | None:intergenic |
GACGCCTCTTCCTCTATAAC+AGG | 0.361911 | 3.4:+97554349 | MS.gene064724:CDS |
TTGCAGGGTCATTGTTGATT+TGG | 0.364365 | 3.4:-97554912 | None:intergenic |
CTATGACCCTATCGTATCTA+AGG | 0.368053 | 3.4:+97554327 | MS.gene064724:CDS |
AGCAGCTGATTCGGATGAAC+AGG | 0.372820 | 3.4:-97555652 | None:intergenic |
GCCTCTACATCAGAATAATA+AGG | 0.375340 | 3.4:-97556248 | None:intergenic |
AATGGAACTGCCGAGGAATT+CGG | 0.383170 | 3.4:+97554814 | MS.gene064724:CDS |
GGCTATCATAAGGCTGGAGC+AGG | 0.390120 | 3.4:+97557206 | MS.gene064724:CDS |
CAATTTCCTGAACTAATTAA+CGG | 0.393033 | 3.4:+97555537 | MS.gene064724:CDS |
TGTTTCAGGCTAGAACCATT+AGG | 0.394864 | 3.4:-97556080 | None:intergenic |
CGGATGAACAGGAAATTGTT+GGG | 0.395596 | 3.4:-97555641 | None:intergenic |
AGTGAAGTTTAAGAGTGAAT+TGG | 0.399488 | 3.4:-97555133 | None:intergenic |
GGAGCATTGGCCCTATTATA+TGG | 0.401345 | 3.4:+97557267 | MS.gene064724:CDS |
CAAGACCAACGTTGAGGTTG+AGG | 0.402737 | 3.4:+97553636 | MS.gene064724:CDS |
CTGAGGCCATTTCCGAGTGC+TGG | 0.404415 | 3.4:-97556044 | None:intergenic |
TGCCTTCCAGGACCTGTTTG+TGG | 0.404574 | 3.4:+97555813 | MS.gene064724:CDS |
AGAAATCATGGCCAACCTAA+TGG | 0.412077 | 3.4:+97556065 | MS.gene064724:CDS |
CTGAAGCGGAAGCTGCCATT+TGG | 0.420213 | 3.4:-97555503 | None:intergenic |
TCGGATGAACAGGAAATTGT+TGG | 0.429271 | 3.4:-97555642 | None:intergenic |
GTGGGGTCCGCAGATGTTCT+GGG | 0.429944 | 3.4:+97556155 | MS.gene064724:CDS |
TGAATTTGAGGTTCCTCCTC+AGG | 0.430219 | 3.4:-97554772 | None:intergenic |
GCTTTCCAATTATCTGATTG+AGG | 0.431059 | 3.4:+97558287 | MS.gene064724:CDS |
ATGGATTCTGTTGGAAAAGA+TGG | 0.431255 | 3.4:+97555177 | MS.gene064724:CDS |
AATTCACTCTTAAACTTCAC+TGG | 0.433717 | 3.4:+97555135 | MS.gene064724:CDS |
CAGGTTTCTTCTCAGACAAC+GGG | 0.434080 | 3.4:+97555783 | MS.gene064724:CDS |
TTTGCAGAATGGAGCTTCCT+TGG | 0.435277 | 3.4:+97554225 | MS.gene064724:intron |
TAATGGTTCTAGCCTGAAAC+AGG | 0.435818 | 3.4:+97556082 | MS.gene064724:CDS |
AAGAAACCAGCACTCGGAAA+TGG | 0.436278 | 3.4:+97556038 | MS.gene064724:CDS |
TCATATAAATCATGATCATC+AGG | 0.445771 | 3.4:-97556392 | None:intergenic |
TGATCTGAACAACCATCAAT+TGG | 0.446899 | 3.4:-97555249 | None:intergenic |
ACCGGCATGTCCTGAATGTC+AGG | 0.447641 | 3.4:-97555024 | None:intergenic |
CATCATTGGATGGAACTTCC+GGG | 0.449026 | 3.4:-97555590 | None:intergenic |
TCCTTGGAAGCAATTGCAAA+AGG | 0.451436 | 3.4:+97554241 | MS.gene064724:CDS |
AACACAATGTCACAATCTAA+TGG | 0.456391 | 3.4:+97555453 | MS.gene064724:CDS |
ACATTCAGGACATGCCGGTC+TGG | 0.456435 | 3.4:+97555028 | MS.gene064724:CDS |
ATTGTTTCCACCTAGGTCAC+TGG | 0.459702 | 3.4:-97555907 | None:intergenic |
GATTCTATTGCTTGCGAGGA+TGG | 0.460549 | 3.4:+97555093 | MS.gene064724:CDS |
TTTCATGTAGATATTGACTT+AGG | 0.461460 | 3.4:+97557847 | MS.gene064724:CDS |
AATATACCAGTTCCATCATC+TGG | 0.465195 | 3.4:+97555684 | MS.gene064724:CDS |
AATCATGATCCGTCACACTA+TGG | 0.467332 | 3.4:+97554640 | MS.gene064724:CDS |
TTAATTAGTTCAGGAAATTG+AGG | 0.469269 | 3.4:-97555534 | None:intergenic |
ACATTATCCTCATGAATTTG+AGG | 0.475097 | 3.4:-97554784 | None:intergenic |
GGGTAGGAAAACATCATCAT+TGG | 0.478904 | 3.4:-97555604 | None:intergenic |
TTGAGGAAATACAAGAAAGA+TGG | 0.479331 | 3.4:+97554293 | MS.gene064724:CDS |
TGAGTGGCGACCATATAATA+GGG | 0.480798 | 3.4:-97557277 | None:intergenic |
TTGAAGAACTTTGATGGGAG+AGG | 0.480913 | 3.4:-97554391 | None:intergenic |
TATTGAATCGCCGAATTCCT+CGG | 0.484243 | 3.4:-97554824 | None:intergenic |
CCATAATCATTACCAGATGA+TGG | 0.485021 | 3.4:-97555696 | None:intergenic |
AACTAGAAAATTGTAGTCCA+TGG | 0.490147 | 3.4:-97554527 | None:intergenic |
AAACTAAGCGGGCTATCATA+AGG | 0.490452 | 3.4:+97557196 | MS.gene064724:CDS |
TTCTTATATGCAGAGAGCTA+TGG | 0.490508 | 3.4:+97557236 | MS.gene064724:CDS |
AACAGGTCCTGGAAGGCAAT+GGG | 0.491562 | 3.4:-97555808 | None:intergenic |
GAAGCTGCCATTTGGAACTC+TGG | 0.492070 | 3.4:-97555495 | None:intergenic |
TTCAGATCAGATACCTGAAA+TGG | 0.493723 | 3.4:+97555263 | MS.gene064724:CDS |
TCTGTTGGAAAAGATGGGAT+TGG | 0.498372 | 3.4:+97555183 | MS.gene064724:CDS |
CAATCTCATATCTAGACGTC+AGG | 0.498422 | 3.4:+97557885 | MS.gene064724:CDS |
TTAGAACCACAAACAGGTCC+TGG | 0.499033 | 3.4:-97555819 | None:intergenic |
TTCTAGCCTGAAACAGGAAC+GGG | 0.499074 | 3.4:+97556088 | MS.gene064724:CDS |
TAATTAGTTCAGGAAATTGA+GGG | 0.501306 | 3.4:-97555533 | None:intergenic |
CTATTTCTGATGGATTCTGT+TGG | 0.501811 | 3.4:+97555168 | MS.gene064724:CDS |
TAGAGATATGCAAACTTCCA+TGG | 0.503196 | 3.4:+97554510 | MS.gene064724:CDS |
TTGCATCATTGTTTCCACCT+AGG | 0.504103 | 3.4:-97555914 | None:intergenic |
AGATGGTGGTTTACAGTGAA+AGG | 0.504710 | 3.4:+97556183 | MS.gene064724:CDS |
GCCTGAAAACTGTGCACTCG+AGG | 0.506036 | 3.4:+97554594 | MS.gene064724:CDS |
TTCAGAAAATGATAATTATG+TGG | 0.507506 | 3.4:+97554552 | MS.gene064724:CDS |
ACCTTTAACATGTGCATCAA+AGG | 0.508533 | 3.4:-97555397 | None:intergenic |
ATGCTCGAAACCTGTTATAG+AGG | 0.510920 | 3.4:-97554359 | None:intergenic |
TCATTACCAGATGATGGAAC+TGG | 0.511561 | 3.4:-97555690 | None:intergenic |
TCAGGTTTCTTCTCAGACAA+CGG | 0.515527 | 3.4:+97555782 | MS.gene064724:CDS |
TGTTCTTCTGTTCTCCAGAC+CGG | 0.516912 | 3.4:-97555042 | None:intergenic |
GGAAATGGCCTCAGAAATCA+TGG | 0.518899 | 3.4:+97556053 | MS.gene064724:CDS |
TTATTCTGATGTAGAGGCCA+TGG | 0.519752 | 3.4:+97556253 | MS.gene064724:CDS |
TTTACGAAGCTAACATCGAC+AGG | 0.520007 | 3.4:-97555981 | None:intergenic |
GGTCTGGAGAACAGAAGAAC+AGG | 0.520859 | 3.4:+97555044 | MS.gene064724:CDS |
AAACAGGTCCTGGAAGGCAA+TGG | 0.521092 | 3.4:-97555809 | None:intergenic |
TTCTTCTCCTTGGACTTCCG+AGG | 0.522656 | 3.4:+97553600 | MS.gene064724:CDS |
GAGGATAATGTGCTTCTGAA+TGG | 0.524333 | 3.4:+97554796 | MS.gene064724:CDS |
GACTGAAACAGAGCTGTTAG+CGG | 0.526338 | 3.4:+97555374 | MS.gene064724:CDS |
TGAGGAAGAGCTATTTCTGA+TGG | 0.528232 | 3.4:+97555158 | MS.gene064724:CDS |
CTGACGTCTAGATATGAGAT+TGG | 0.531053 | 3.4:-97557884 | None:intergenic |
GATTTATATGATAATGAAGA+AGG | 0.531518 | 3.4:+97556404 | MS.gene064724:CDS |
TAAGCGGGCTATCATAAGGC+TGG | 0.532916 | 3.4:+97557200 | MS.gene064724:CDS |
TATGGCTTCACATGGAGCAT+TGG | 0.533692 | 3.4:+97557254 | MS.gene064724:CDS |
CATATAATCTTCATCAAACT+CGG | 0.539231 | 3.4:-97554944 | None:intergenic |
ATTATTGCTTCCAGTGACCT+AGG | 0.539814 | 3.4:+97555897 | MS.gene064724:CDS |
TCCTTATTATTCTGATGTAG+AGG | 0.540004 | 3.4:+97556247 | MS.gene064724:CDS |
TGGAAGTTTGCATATCTCTA+CGG | 0.543472 | 3.4:-97554507 | None:intergenic |
AGAAGAAACCTGAGCTCCTA+CGG | 0.544483 | 3.4:-97555772 | None:intergenic |
TCCTGACATTCAGGACATGC+CGG | 0.548782 | 3.4:+97555023 | MS.gene064724:CDS |
TCAGTTGCAACATGCTGAAG+TGG | 0.548794 | 3.4:+97556136 | MS.gene064724:CDS |
TTGAGGGTCTTTAGCTGAAG+CGG | 0.550564 | 3.4:-97555517 | None:intergenic |
GAAACCTGTTATAGAGGAAG+AGG | 0.551494 | 3.4:-97554353 | None:intergenic |
CAGGATAATATTCCATGTGA+TGG | 0.557447 | 3.4:+97555063 | MS.gene064724:CDS |
GAATTCCCACACTCTAACTC+AGG | 0.557612 | 3.4:-97554976 | None:intergenic |
ATTGGTAAATCTTATTATGA+CGG | 0.558102 | 3.4:+97555201 | MS.gene064724:CDS |
CAGTTGCAACATGCTGAAGT+GGG | 0.561922 | 3.4:+97556137 | MS.gene064724:CDS |
TGCTCTACATGCAAGTCCTA+AGG | 0.563413 | 3.4:+97555953 | MS.gene064724:CDS |
TCAGGCTAGAACCATTAGGT+TGG | 0.564102 | 3.4:-97556076 | None:intergenic |
TGGATTCTGTTGGAAAAGAT+GGG | 0.564113 | 3.4:+97555178 | MS.gene064724:CDS |
GATTCACCTGAGTTAGAGTG+TGG | 0.567474 | 3.4:+97554970 | MS.gene064724:CDS |
CAGAGAGCTATGGCTTCACA+TGG | 0.568900 | 3.4:+97557246 | MS.gene064724:CDS |
TGTTCTGGGGTCTGAGATGG+TGG | 0.569785 | 3.4:+97556169 | MS.gene064724:CDS |
GGAGATAGAGCTAGCAGGAG+AGG | 0.577575 | 3.4:+97555717 | MS.gene064724:CDS |
TCTTGATATAGTACTTTGAG+TGG | 0.578272 | 3.4:-97557293 | None:intergenic |
AAAAGATTCTATTGCTTGCG+AGG | 0.580675 | 3.4:+97555089 | MS.gene064724:CDS |
CCTGAAAACTGTGCACTCGA+GGG | 0.581553 | 3.4:+97554595 | MS.gene064724:CDS |
CTTGAGCAAAAGATCATCCT+CGG | 0.583382 | 3.4:-97553617 | None:intergenic |
TGTAATAAATACTGAAGACC+CGG | 0.584235 | 3.4:+97555572 | MS.gene064724:CDS |
ACAGGTACTTGATATGGACT+TGG | 0.587590 | 3.4:+97556367 | MS.gene064724:intron |
GGATGAACAGGAAATTGTTG+GGG | 0.588114 | 3.4:-97555640 | None:intergenic |
TAGGTTGGCCATGATTTCTG+AGG | 0.588324 | 3.4:-97556061 | None:intergenic |
AGATGTTCTGGGGTCTGAGA+TGG | 0.588696 | 3.4:+97556166 | MS.gene064724:CDS |
GTAGATATTGACTTAGGCAA+AGG | 0.590406 | 3.4:+97557853 | MS.gene064724:CDS |
AGGAAAACATCATCATTGGA+TGG | 0.590849 | 3.4:-97555600 | None:intergenic |
GCTATCATAAGGCTGGAGCA+GGG | 0.592080 | 3.4:+97557207 | MS.gene064724:CDS |
GATATTGACTTAGGCAAAGG+AGG | 0.597784 | 3.4:+97557856 | MS.gene064724:CDS |
AGATCATCCTCGGAAGTCCA+AGG | 0.600476 | 3.4:-97553607 | None:intergenic |
TTAGTTGGACGATCAACAGA+AGG | 0.601805 | 3.4:+97557823 | MS.gene064724:CDS |
CCAAAACAATATACCTGAGG+AGG | 0.602011 | 3.4:+97554759 | MS.gene064724:CDS |
AGGCGTCCTTAGATACGATA+GGG | 0.606556 | 3.4:-97554333 | None:intergenic |
ATCAACACGAAGAAACTAAG+CGG | 0.612075 | 3.4:+97557184 | MS.gene064724:CDS |
GGGGAGGCTCATTAAAGGGT+AGG | 0.614820 | 3.4:-97555620 | None:intergenic |
TCTGGAAGACCATAGTGTGA+CGG | 0.616832 | 3.4:-97554649 | None:intergenic |
ACTCTTAAACTTCACTGGTG+AGG | 0.618343 | 3.4:+97555140 | MS.gene064724:CDS |
ATTATGGAGATAGAGCTAGC+AGG | 0.621915 | 3.4:+97555712 | MS.gene064724:CDS |
ACAGAAGTAGACGACAATGC+AGG | 0.622677 | 3.4:+97555348 | MS.gene064724:CDS |
GTTCTAGCCTGAAACAGGAA+CGG | 0.624239 | 3.4:+97556087 | MS.gene064724:CDS |
AACCACAAACAGGTCCTGGA+AGG | 0.625069 | 3.4:-97555815 | None:intergenic |
TCAACACGAAGAAACTAAGC+GGG | 0.626611 | 3.4:+97557185 | MS.gene064724:CDS |
TGGGGTCCGCAGATGTTCTG+GGG | 0.628917 | 3.4:+97556156 | MS.gene064724:CDS |
GAGGCGTCCTTAGATACGAT+AGG | 0.630079 | 3.4:-97554334 | None:intergenic |
TTTGCTCAAGACCAACGTTG+AGG | 0.631802 | 3.4:+97553630 | MS.gene064724:CDS |
TAAATCAAAGTGGTATGAAG+CGG | 0.633339 | 3.4:+97558576 | MS.gene064724:CDS |
ATTCACCTGAGTTAGAGTGT+GGG | 0.634516 | 3.4:+97554971 | MS.gene064724:CDS |
AATGTCACAATCTAATGGCG+TGG | 0.640479 | 3.4:+97555458 | MS.gene064724:CDS |
CTCAGACCCCAGAACATCTG+CGG | 0.641623 | 3.4:-97556162 | None:intergenic |
ACTCGGAGCACAAATTTGCA+GGG | 0.643928 | 3.4:-97554927 | None:intergenic |
TCACATAAGAAACCAGCACT+CGG | 0.662353 | 3.4:+97556032 | MS.gene064724:CDS |
ATAAACCTCAACCTCAACGT+TGG | 0.665975 | 3.4:-97553641 | None:intergenic |
GCTTCTGAATGGAACTGCCG+AGG | 0.673898 | 3.4:+97554807 | MS.gene064724:CDS |
AGTTGCAACATGCTGAAGTG+GGG | 0.674634 | 3.4:+97556138 | MS.gene064724:CDS |
GGAGGAACCTCAAATTCATG+AGG | 0.676617 | 3.4:+97554777 | MS.gene064724:CDS |
GTACTATATCAAGAAAACTG+AGG | 0.689460 | 3.4:+97557302 | MS.gene064724:CDS |
TTACAGTGAAAGGTTAGACG+AGG | 0.692509 | 3.4:+97556193 | MS.gene064724:CDS |
ATTGCTTCCAGTGACCTAGG+TGG | 0.693297 | 3.4:+97555900 | MS.gene064724:CDS |
AATAGCACAGAATTGCACAC+TGG | 0.709257 | 3.4:+97558249 | MS.gene064724:CDS |
GATGAACAGGAAATTGTTGG+GGG | 0.710491 | 3.4:-97555639 | None:intergenic |
GGACCAAAACAATATACCTG+AGG | 0.722831 | 3.4:+97554756 | MS.gene064724:CDS |
TCTGTGCGACATGAAACAGA+CGG | 0.723189 | 3.4:-97555330 | None:intergenic |
ATATTCGAGATAAATCAAAG+TGG | 0.731343 | 3.4:+97558566 | MS.gene064724:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTCAAAAAGTAAAAAT+CGG | - | chr3.4:97557388-97557407 | None:intergenic | 10.0% |
!!! | TTTTGTTTTAAATTTTGAAA+GGG | + | chr3.4:97557692-97557711 | MS.gene064724:intron | 10.0% |
!!! | TTTTTGTTTTAAATTTTGAA+AGG | + | chr3.4:97557691-97557710 | MS.gene064724:intron | 10.0% |
!! | ATAAATATAAACGTACTATA+AGG | + | chr3.4:97556714-97556733 | MS.gene064724:intron | 15.0% |
!! | CTAGATATAGAAAAATTTAT+TGG | + | chr3.4:97554850-97554869 | MS.gene064724:CDS | 15.0% |
!! | GATAGTATTAAAAAATGAAA+TGG | - | chr3.4:97553870-97553889 | None:intergenic | 15.0% |
!! | TATATTTATAATTGCAAAAC+AGG | - | chr3.4:97557625-97557644 | None:intergenic | 15.0% |
!!! | AATGCAGTTTTTTATTTTTT+TGG | + | chr3.4:97557942-97557961 | MS.gene064724:intron | 15.0% |
!! | AAATATGATAAAACAGATTC+TGG | - | chr3.4:97556915-97556934 | None:intergenic | 20.0% |
!! | AATGATAATTATGTGGTAAA+TGG | + | chr3.4:97554559-97554578 | MS.gene064724:CDS | 20.0% |
!! | AGATTATTAGTACACATATA+TGG | + | chr3.4:97557506-97557525 | MS.gene064724:intron | 20.0% |
!! | ATAAAAACGGAAAGTTTAAT+TGG | - | chr3.4:97558153-97558172 | None:intergenic | 20.0% |
!! | ATCATAAAAATGGATAAAGA+TGG | + | chr3.4:97558183-97558202 | MS.gene064724:CDS | 20.0% |
!! | ATTGGTAAATCTTATTATGA+CGG | + | chr3.4:97555201-97555220 | MS.gene064724:CDS | 20.0% |
!! | CAAAAGAAACTAAATTATGT+TGG | - | chr3.4:97557088-97557107 | None:intergenic | 20.0% |
!! | TATTGAGGTCAATTTATATT+TGG | - | chr3.4:97558128-97558147 | None:intergenic | 20.0% |
!! | TCATTCTACATTAAAAACAT+TGG | + | chr3.4:97558207-97558226 | MS.gene064724:CDS | 20.0% |
!! | TTCAGAAAATGATAATTATG+TGG | + | chr3.4:97554552-97554571 | MS.gene064724:CDS | 20.0% |
!! | TTCCTGATAAAATAAAACAA+TGG | + | chr3.4:97558390-97558409 | MS.gene064724:intron | 20.0% |
!!! | AATTTTATGGATGTTGATAT+TGG | + | chr3.4:97554673-97554692 | MS.gene064724:CDS | 20.0% |
!!! | ATATCTACTCATTTAAAATC+TGG | + | chr3.4:97557974-97557993 | MS.gene064724:intron | 20.0% |
!!! | ATTTAGTTTCTTTTGTGATT+CGG | + | chr3.4:97557093-97557112 | MS.gene064724:intron | 20.0% |
!!! | CCAAATTTTTTAGCAAAATA+AGG | - | chr3.4:97556675-97556694 | None:intergenic | 20.0% |
!!! | CCTTATTTTGCTAAAAAATT+TGG | + | chr3.4:97556672-97556691 | MS.gene064724:intron | 20.0% |
!!! | GATTTATATGATAATGAAGA+AGG | + | chr3.4:97556404-97556423 | MS.gene064724:CDS | 20.0% |
!!! | TTTTTATGTGTGTTTCAATT+TGG | + | chr3.4:97554061-97554080 | MS.gene064724:intron | 20.0% |
! | AAAGTTTAATTGGCATATTG+AGG | - | chr3.4:97558143-97558162 | None:intergenic | 25.0% |
! | AATAAGTCAGAAAATTGCAA+AGG | - | chr3.4:97556333-97556352 | None:intergenic | 25.0% |
! | AATAGAAATGATCTTCAGTT+AGG | - | chr3.4:97556564-97556583 | None:intergenic | 25.0% |
! | AATATAAACGTACTATAAGG+AGG | + | chr3.4:97556717-97556736 | MS.gene064724:intron | 25.0% |
! | ATATAAACGTACTATAAGGA+GGG | + | chr3.4:97556718-97556737 | MS.gene064724:intron | 25.0% |
! | ATATTCGAGATAAATCAAAG+TGG | + | chr3.4:97558566-97558585 | MS.gene064724:CDS | 25.0% |
! | ATGAATGAGTAAATTAGTTG+AGG | - | chr3.4:97553742-97553761 | None:intergenic | 25.0% |
! | CAATTTCCTGAACTAATTAA+CGG | + | chr3.4:97555537-97555556 | MS.gene064724:CDS | 25.0% |
! | CATATAATCTTCATCAAACT+CGG | - | chr3.4:97554947-97554966 | None:intergenic | 25.0% |
! | TAAAATAAAACAATGGTGAC+TGG | + | chr3.4:97558397-97558416 | MS.gene064724:intron | 25.0% |
! | TAATTAGTTCAGGAAATTGA+GGG | - | chr3.4:97555536-97555555 | None:intergenic | 25.0% |
! | TACTTCAATGGTAAATAGTT+GGG | + | chr3.4:97558079-97558098 | MS.gene064724:intron | 25.0% |
! | TACTTTAATACTCTTTCAGT+TGG | + | chr3.4:97556776-97556795 | MS.gene064724:intron | 25.0% |
! | TCATATAAATCATGATCATC+AGG | - | chr3.4:97556395-97556414 | None:intergenic | 25.0% |
! | TTAATTAGTTCAGGAAATTG+AGG | - | chr3.4:97555537-97555556 | None:intergenic | 25.0% |
! | TTACTTCAATGGTAAATAGT+TGG | + | chr3.4:97558078-97558097 | MS.gene064724:intron | 25.0% |
! | TTATACCTCAATCAGATAAT+TGG | - | chr3.4:97558295-97558314 | None:intergenic | 25.0% |
! | TTATCACAAAAAATAACGTG+AGG | - | chr3.4:97557424-97557443 | None:intergenic | 25.0% |
!! | ATTAGTTTATAGTTACACTG+TGG | + | chr3.4:97558021-97558040 | MS.gene064724:intron | 25.0% |
!! | TCAACATCCATAAAATTTTC+TGG | - | chr3.4:97554670-97554689 | None:intergenic | 25.0% |
!! | TTTTAACACATTGTAGTCTA+AGG | + | chr3.4:97554025-97554044 | MS.gene064724:intron | 25.0% |
!!! | AAGAAGGTATTACTATTATG+TGG | + | chr3.4:97556420-97556439 | MS.gene064724:intron | 25.0% |
!!! | ACAAAATGTGCATTTTAGTT+CGG | - | chr3.4:97557668-97557687 | None:intergenic | 25.0% |
!!! | CAATTTTGAAGAACTTTGAT+GGG | - | chr3.4:97554399-97554418 | None:intergenic | 25.0% |
!!! | CACCATTGTTTTATTTTATC+AGG | - | chr3.4:97558395-97558414 | None:intergenic | 25.0% |
!!! | GCTTTAAGAAATTACTTCAA+TGG | + | chr3.4:97558067-97558086 | MS.gene064724:intron | 25.0% |
!!! | TTCTCGAAAATATAGTTTTG+AGG | + | chr3.4:97554276-97554295 | MS.gene064724:CDS | 25.0% |
!!! | TTTATTTTAGAACCACAAAC+AGG | - | chr3.4:97555828-97555847 | None:intergenic | 25.0% |
!!! | TTTCATGTAGATATTGACTT+AGG | + | chr3.4:97557847-97557866 | MS.gene064724:CDS | 25.0% |
AACACAATGTCACAATCTAA+TGG | + | chr3.4:97555453-97555472 | MS.gene064724:CDS | 30.0% | |
AACTAGAAAATTGTAGTCCA+TGG | - | chr3.4:97554530-97554549 | None:intergenic | 30.0% | |
AAGCAAAAACATTCACACAA+AGG | - | chr3.4:97557006-97557025 | None:intergenic | 30.0% | |
AATTCACTCTTAAACTTCAC+TGG | + | chr3.4:97555135-97555154 | MS.gene064724:CDS | 30.0% | |
ACATTATCCTCATGAATTTG+AGG | - | chr3.4:97554787-97554806 | None:intergenic | 30.0% | |
AGTGAAGTTTAAGAGTGAAT+TGG | - | chr3.4:97555136-97555155 | None:intergenic | 30.0% | |
ATCGAAAATGAAAGAGAGAA+AGG | - | chr3.4:97553676-97553695 | None:intergenic | 30.0% | |
ATGTTTCAGAATTAACTAGC+AGG | - | chr3.4:97556947-97556966 | None:intergenic | 30.0% | |
CCATCAAAGTTCTTCAAAAT+TGG | + | chr3.4:97554397-97554416 | MS.gene064724:CDS | 30.0% | |
GATTGCCTGAAACATAAAAA+CGG | - | chr3.4:97558166-97558185 | None:intergenic | 30.0% | |
GCAAATCAAATCTAACTAGT+GGG | + | chr3.4:97557763-97557782 | MS.gene064724:intron | 30.0% | |
GCAACTCTCGAATAAATAAA+TGG | + | chr3.4:97558513-97558532 | MS.gene064724:intron | 30.0% | |
GGTAATCAATCAGATTTAGA+AGG | - | chr3.4:97558328-97558347 | None:intergenic | 30.0% | |
GTACTATATCAAGAAAACTG+AGG | + | chr3.4:97557302-97557321 | MS.gene064724:CDS | 30.0% | |
GTTTCAGGCAATCATAAAAA+TGG | + | chr3.4:97558173-97558192 | MS.gene064724:intron | 30.0% | |
TAAATCAAAGTGGTATGAAG+CGG | + | chr3.4:97558576-97558595 | MS.gene064724:CDS | 30.0% | |
TAAATCTGATTGATTACCAC+TGG | + | chr3.4:97558330-97558349 | MS.gene064724:intron | 30.0% | |
TATAAACGTACTATAAGGAG+GGG | + | chr3.4:97556719-97556738 | MS.gene064724:intron | 30.0% | |
TCCTTATTATTCTGATGTAG+AGG | + | chr3.4:97556247-97556266 | MS.gene064724:CDS | 30.0% | |
TCGAAAATGAAAGAGAGAAA+GGG | - | chr3.4:97553675-97553694 | None:intergenic | 30.0% | |
TCTACATTAAAAACATTGGC+AGG | + | chr3.4:97558211-97558230 | MS.gene064724:CDS | 30.0% | |
TCTTGATATAGTACTTTGAG+TGG | - | chr3.4:97557296-97557315 | None:intergenic | 30.0% | |
TGAGGTCAATTTATATTTGG+TGG | - | chr3.4:97558125-97558144 | None:intergenic | 30.0% | |
TGCAAATCAAATCTAACTAG+TGG | + | chr3.4:97557762-97557781 | MS.gene064724:intron | 30.0% | |
TGTAATAAATACTGAAGACC+CGG | + | chr3.4:97555572-97555591 | MS.gene064724:CDS | 30.0% | |
TTACTAAACTCTCCAATTGA+TGG | + | chr3.4:97555237-97555256 | MS.gene064724:CDS | 30.0% | |
TTGAGGAAATACAAGAAAGA+TGG | + | chr3.4:97554293-97554312 | MS.gene064724:CDS | 30.0% | |
TTTAAACCAGAATCCTGAAA+TGG | - | chr3.4:97554184-97554203 | None:intergenic | 30.0% | |
TTTATTTATTCGAGAGTTGC+AGG | - | chr3.4:97558513-97558532 | None:intergenic | 30.0% | |
TTTGAACCATCATAAAAGCA+TGG | - | chr3.4:97557789-97557808 | None:intergenic | 30.0% | |
! | ACAGGTATTTTCAACTACAT+TGG | - | chr3.4:97557607-97557626 | None:intergenic | 30.0% |
! | ACGAATTTTTGAATTCCAAG+AGG | + | chr3.4:97556747-97556766 | MS.gene064724:intron | 30.0% |
! | AGATTCAACTTTTGGATTTG+TGG | + | chr3.4:97556864-97556883 | MS.gene064724:intron | 30.0% |
! | CAAGCTTTATATTTGCAGAA+TGG | + | chr3.4:97554214-97554233 | MS.gene064724:intron | 30.0% |
! | CAGATTATGTTTCTAACATG+AGG | + | chr3.4:97557539-97557558 | MS.gene064724:intron | 30.0% |
! | TAGTTGTCTCTCTTTTCAAT+AGG | - | chr3.4:97556527-97556546 | None:intergenic | 30.0% |
! | TGGTCTTCCAGAAAATTTTA+TGG | + | chr3.4:97554660-97554679 | MS.gene064724:CDS | 30.0% |
!! | ACTTTCCGTTTTTATGTTTC+AGG | + | chr3.4:97558158-97558177 | MS.gene064724:intron | 30.0% |
!! | CCAATTTTGAAGAACTTTGA+TGG | - | chr3.4:97554400-97554419 | None:intergenic | 30.0% |
!! | TGCAACTGATTATTTTCAAG+TGG | - | chr3.4:97556125-97556144 | None:intergenic | 30.0% |
!! | TGCTCTAACATTGTTTTTCT+AGG | + | chr3.4:97553781-97553800 | MS.gene064724:intron | 30.0% |
!!! | ATGGTTTATTTTGCAGTTGA+AGG | + | chr3.4:97558532-97558551 | MS.gene064724:intron | 30.0% |
!!! | CAAAATGTGCATTTTAGTTC+GGG | - | chr3.4:97557667-97557686 | None:intergenic | 30.0% |
!!! | TGGTTTATTTTGCAGTTGAA+GGG | + | chr3.4:97558533-97558552 | MS.gene064724:intron | 30.0% |
AAAAGATTCTATTGCTTGCG+AGG | + | chr3.4:97555089-97555108 | MS.gene064724:CDS | 35.0% | |
AAAATGCAGAATTCTTCGAG+TGG | + | chr3.4:97558436-97558455 | MS.gene064724:intron | 35.0% | |
AAACTGCATTAAGTCAGAGT+TGG | - | chr3.4:97557932-97557951 | None:intergenic | 35.0% | |
AACATGCTATGTTGTTGTCA+TGG | + | chr3.4:97556839-97556858 | MS.gene064724:intron | 35.0% | |
AATATACCAGTTCCATCATC+TGG | + | chr3.4:97555684-97555703 | MS.gene064724:CDS | 35.0% | |
ACAACTCCGTTAATTAGTTC+AGG | - | chr3.4:97555546-97555565 | None:intergenic | 35.0% | |
ACCTTTAACATGTGCATCAA+AGG | - | chr3.4:97555400-97555419 | None:intergenic | 35.0% | |
AGGAAAACATCATCATTGGA+TGG | - | chr3.4:97555603-97555622 | None:intergenic | 35.0% | |
ATAAACGTACTATAAGGAGG+GGG | + | chr3.4:97556720-97556739 | MS.gene064724:intron | 35.0% | |
ATCAACACGAAGAAACTAAG+CGG | + | chr3.4:97557184-97557203 | MS.gene064724:CDS | 35.0% | |
ATGGATTCTGTTGGAAAAGA+TGG | + | chr3.4:97555177-97555196 | MS.gene064724:CDS | 35.0% | |
ATTAAAGTAGTGCAACCTCT+TGG | - | chr3.4:97556765-97556784 | None:intergenic | 35.0% | |
CAGGATAATATTCCATGTGA+TGG | + | chr3.4:97555063-97555082 | MS.gene064724:CDS | 35.0% | |
CCATAATCATTACCAGATGA+TGG | - | chr3.4:97555699-97555718 | None:intergenic | 35.0% | |
GCCTCTACATCAGAATAATA+AGG | - | chr3.4:97556251-97556270 | None:intergenic | 35.0% | |
GCTTTCCAATTATCTGATTG+AGG | + | chr3.4:97558287-97558306 | MS.gene064724:CDS | 35.0% | |
TAGAGATATGCAAACTTCCA+TGG | + | chr3.4:97554510-97554529 | MS.gene064724:CDS | 35.0% | |
TATCTTCTTCTTCTTCTCCT+TGG | + | chr3.4:97553590-97553609 | MS.gene064724:CDS | 35.0% | |
TATTCATGATTCCTTCCTAC+AGG | + | chr3.4:97556349-97556368 | MS.gene064724:intron | 35.0% | |
TCAAAAACCAGAGTTCCAAA+TGG | + | chr3.4:97555488-97555507 | MS.gene064724:CDS | 35.0% | |
TGATCTGAACAACCATCAAT+TGG | - | chr3.4:97555252-97555271 | None:intergenic | 35.0% | |
TGGAAGTTTGCATATCTCTA+CGG | - | chr3.4:97554510-97554529 | None:intergenic | 35.0% | |
TGGATTCTGTTGGAAAAGAT+GGG | + | chr3.4:97555178-97555197 | MS.gene064724:CDS | 35.0% | |
TGTGTGTTTCAATTTGGTTG+TGG | + | chr3.4:97554067-97554086 | MS.gene064724:intron | 35.0% | |
TTCAGATCAGATACCTGAAA+TGG | + | chr3.4:97555263-97555282 | MS.gene064724:CDS | 35.0% | |
TTCTTATATGCAGAGAGCTA+TGG | + | chr3.4:97557236-97557255 | MS.gene064724:CDS | 35.0% | |
TTTAATACTATCGTCGATCG+CGG | + | chr3.4:97553878-97553897 | MS.gene064724:intron | 35.0% | |
TTTATGCTACCTCATGGTAT+TGG | + | chr3.4:97556596-97556615 | MS.gene064724:intron | 35.0% | |
! | ACTTGAAGAGAATTTTCCCA+TGG | + | chr3.4:97554735-97554754 | MS.gene064724:CDS | 35.0% |
! | ATTTTTAACATCTTCGCGTG+GGG | - | chr3.4:97555310-97555329 | None:intergenic | 35.0% |
! | CCATCATCTGGTAATGATTA+TGG | + | chr3.4:97555696-97555715 | MS.gene064724:CDS | 35.0% |
! | GAATCTTTTGAACCATCACA+TGG | - | chr3.4:97555078-97555097 | None:intergenic | 35.0% |
! | GATTTTTAACATCTTCGCGT+GGG | - | chr3.4:97555311-97555330 | None:intergenic | 35.0% |
! | TCATGGCTAGATTCAACTTT+TGG | + | chr3.4:97556856-97556875 | MS.gene064724:intron | 35.0% |
! | TGCATTTTTATGCTACCTCA+TGG | + | chr3.4:97556590-97556609 | MS.gene064724:intron | 35.0% |
! | TTCAACTTTTGGATTTGTGG+TGG | + | chr3.4:97556867-97556886 | MS.gene064724:intron | 35.0% |
!! | AGATGATGGAACTGGTATAT+TGG | - | chr3.4:97555685-97555704 | None:intergenic | 35.0% |
!! | CTATTTCTGATGGATTCTGT+TGG | + | chr3.4:97555168-97555187 | MS.gene064724:CDS | 35.0% |
!! | GATGATGGAACTGGTATATT+GGG | - | chr3.4:97555684-97555703 | None:intergenic | 35.0% |
!! | GTAGATATTGACTTAGGCAA+AGG | + | chr3.4:97557853-97557872 | MS.gene064724:CDS | 35.0% |
!!! | AGGTATATTGTTTTGGTCCA+TGG | - | chr3.4:97554755-97554774 | None:intergenic | 35.0% |
!!! | GGTATATTGTTTTGGTCCAT+GGG | - | chr3.4:97554754-97554773 | None:intergenic | 35.0% |
!!! | TAGTCTAAGGTTGCTTTTCT+TGG | + | chr3.4:97554038-97554057 | MS.gene064724:intron | 35.0% |
AACTCTACTTCAGCCATTTC+AGG | - | chr3.4:97555279-97555298 | None:intergenic | 40.0% | |
AATAGCACAGAATTGCACAC+TGG | + | chr3.4:97558249-97558268 | MS.gene064724:CDS | 40.0% | |
AATCATGATCCGTCACACTA+TGG | + | chr3.4:97554640-97554659 | MS.gene064724:CDS | 40.0% | |
AATGTCACAATCTAATGGCG+TGG | + | chr3.4:97555458-97555477 | MS.gene064724:CDS | 40.0% | |
ACAGGTACTTGATATGGACT+TGG | + | chr3.4:97556367-97556386 | MS.gene064724:intron | 40.0% | |
ACTCTTAAACTTCACTGGTG+AGG | + | chr3.4:97555140-97555159 | MS.gene064724:CDS | 40.0% | |
ACTTCACCTATTTGAGCAGT+TGG | + | chr3.4:97556624-97556643 | MS.gene064724:intron | 40.0% | |
AGAAATCATGGCCAACCTAA+TGG | + | chr3.4:97556065-97556084 | MS.gene064724:CDS | 40.0% | |
AGACAACCATTTCAGGATTC+TGG | + | chr3.4:97554175-97554194 | MS.gene064724:intron | 40.0% | |
AGACTACCAACTGCTCAAAT+AGG | - | chr3.4:97556633-97556652 | None:intergenic | 40.0% | |
AGAGACAAGACAACCATTTC+AGG | + | chr3.4:97554168-97554187 | MS.gene064724:intron | 40.0% | |
AGTCCATATCAAGTACCTGT+AGG | - | chr3.4:97556367-97556386 | None:intergenic | 40.0% | |
ATAAACCTCAACCTCAACGT+TGG | - | chr3.4:97553644-97553663 | None:intergenic | 40.0% | |
ATGCTCGAAACCTGTTATAG+AGG | - | chr3.4:97554362-97554381 | None:intergenic | 40.0% | |
ATTATGGAGATAGAGCTAGC+AGG | + | chr3.4:97555712-97555731 | MS.gene064724:CDS | 40.0% | |
ATTATTGCTTCCAGTGACCT+AGG | + | chr3.4:97555897-97555916 | MS.gene064724:CDS | 40.0% | |
ATTCACCTGAGTTAGAGTGT+GGG | + | chr3.4:97554971-97554990 | MS.gene064724:CDS | 40.0% | |
CAATCTCATATCTAGACGTC+AGG | + | chr3.4:97557885-97557904 | MS.gene064724:CDS | 40.0% | |
CAATTTGGTTGTGGAATGTC+CGG | + | chr3.4:97554076-97554095 | MS.gene064724:intron | 40.0% | |
CATATCAAGTACCTGTAGGA+AGG | - | chr3.4:97556363-97556382 | None:intergenic | 40.0% | |
CCAAAACAATATACCTGAGG+AGG | + | chr3.4:97554759-97554778 | MS.gene064724:CDS | 40.0% | |
CGGATGAACAGGAAATTGTT+GGG | - | chr3.4:97555644-97555663 | None:intergenic | 40.0% | |
CTATGACCCTATCGTATCTA+AGG | + | chr3.4:97554327-97554346 | MS.gene064724:CDS | 40.0% | |
CTGACGTCTAGATATGAGAT+TGG | - | chr3.4:97557887-97557906 | None:intergenic | 40.0% | |
CTTCCTACAGGTACTTGATA+TGG | + | chr3.4:97556361-97556380 | MS.gene064724:intron | 40.0% | |
CTTGAGCAAAAGATCATCCT+CGG | - | chr3.4:97553620-97553639 | None:intergenic | 40.0% | |
GAAACCTGTTATAGAGGAAG+AGG | - | chr3.4:97554356-97554375 | None:intergenic | 40.0% | |
GAGGATAATGTGCTTCTGAA+TGG | + | chr3.4:97554796-97554815 | MS.gene064724:CDS | 40.0% | |
GATGAACAGGAAATTGTTGG+GGG | - | chr3.4:97555642-97555661 | None:intergenic | 40.0% | |
GCCTTTGATGCACATGTTAA+AGG | + | chr3.4:97555396-97555415 | MS.gene064724:CDS | 40.0% | |
GGACCAAAACAATATACCTG+AGG | + | chr3.4:97554756-97554775 | MS.gene064724:CDS | 40.0% | |
GGATGAACAGGAAATTGTTG+GGG | - | chr3.4:97555643-97555662 | None:intergenic | 40.0% | |
GGGTAGGAAAACATCATCAT+TGG | - | chr3.4:97555607-97555626 | None:intergenic | 40.0% | |
GGTATTACTATTATGTGGCC+AGG | + | chr3.4:97556425-97556444 | MS.gene064724:intron | 40.0% | |
GTTATCACTTCCTGACATTC+AGG | + | chr3.4:97555014-97555033 | MS.gene064724:CDS | 40.0% | |
GTTGAACAAAAAAGCTCCGT+AGG | + | chr3.4:97555756-97555775 | MS.gene064724:CDS | 40.0% | |
TAAACGTACTATAAGGAGGG+GGG | + | chr3.4:97556721-97556740 | MS.gene064724:intron | 40.0% | |
TATTGAATCGCCGAATTCCT+CGG | - | chr3.4:97554827-97554846 | None:intergenic | 40.0% | |
TCAACACGAAGAAACTAAGC+GGG | + | chr3.4:97557185-97557204 | MS.gene064724:CDS | 40.0% | |
TCAACCACCACTAAAATTCC+TGG | - | chr3.4:97556446-97556465 | None:intergenic | 40.0% | |
TCACATAAGAAACCAGCACT+CGG | + | chr3.4:97556032-97556051 | MS.gene064724:CDS | 40.0% | |
TCAGGTTTCTTCTCAGACAA+CGG | + | chr3.4:97555782-97555801 | MS.gene064724:CDS | 40.0% | |
TCATCATTGGATGGAACTTC+CGG | - | chr3.4:97555594-97555613 | None:intergenic | 40.0% | |
TCCTTGATCTTCACGTTGTT+GGG | + | chr3.4:97557353-97557372 | MS.gene064724:intron | 40.0% | |
TCCTTGGAAGCAATTGCAAA+AGG | + | chr3.4:97554241-97554260 | MS.gene064724:CDS | 40.0% | |
TCGGATGAACAGGAAATTGT+TGG | - | chr3.4:97555645-97555664 | None:intergenic | 40.0% | |
TCTGTTGGAAAAGATGGGAT+TGG | + | chr3.4:97555183-97555202 | MS.gene064724:CDS | 40.0% | |
TGAGTGGCGACCATATAATA+GGG | - | chr3.4:97557280-97557299 | None:intergenic | 40.0% | |
TGTTTCAGGCTAGAACCATT+AGG | - | chr3.4:97556083-97556102 | None:intergenic | 40.0% | |
TTAATACTGTCGTCGTCGAT+CGG | + | chr3.4:97553972-97553991 | MS.gene064724:intron | 40.0% | |
TTACAGTGAAAGGTTAGACG+AGG | + | chr3.4:97556193-97556212 | MS.gene064724:CDS | 40.0% | |
TTAGTTGGACGATCAACAGA+AGG | + | chr3.4:97557823-97557842 | MS.gene064724:CDS | 40.0% | |
TTATTCTGATGTAGAGGCCA+TGG | + | chr3.4:97556253-97556272 | MS.gene064724:CDS | 40.0% | |
TTCCTTGATCTTCACGTTGT+TGG | + | chr3.4:97557352-97557371 | MS.gene064724:intron | 40.0% | |
TTGAAGAACTTTGATGGGAG+AGG | - | chr3.4:97554394-97554413 | None:intergenic | 40.0% | |
TTGAGTGGCGACCATATAAT+AGG | - | chr3.4:97557281-97557300 | None:intergenic | 40.0% | |
TTGCATCATTGTTTCCACCT+AGG | - | chr3.4:97555917-97555936 | None:intergenic | 40.0% | |
TTTACGAAGCTAACATCGAC+AGG | - | chr3.4:97555984-97556003 | None:intergenic | 40.0% | |
! | ACATCGACAGGTTTTTCCTT+AGG | - | chr3.4:97555972-97555991 | None:intergenic | 40.0% |
! | AGATGGTGGTTTACAGTGAA+AGG | + | chr3.4:97556183-97556202 | MS.gene064724:CDS | 40.0% |
! | CCTCCTCAGGTATATTGTTT+TGG | - | chr3.4:97554762-97554781 | None:intergenic | 40.0% |
! | GGATTTTTAACATCTTCGCG+TGG | - | chr3.4:97555312-97555331 | None:intergenic | 40.0% |
! | TATGTGGCCAGGAATTTTAG+TGG | + | chr3.4:97556436-97556455 | MS.gene064724:intron | 40.0% |
! | TTGCAGGGTCATTGTTGATT+TGG | - | chr3.4:97554915-97554934 | None:intergenic | 40.0% |
!! | AAACTAAGCGGGCTATCATA+AGG | + | chr3.4:97557196-97557215 | MS.gene064724:CDS | 40.0% |
!! | ATCATCCTGCAGGTTTTAGT+TGG | + | chr3.4:97557808-97557827 | MS.gene064724:intron | 40.0% |
!! | GAGAGGTAAAGTTTTGATGC+AGG | + | chr3.4:97555734-97555753 | MS.gene064724:CDS | 40.0% |
!! | GATATTGACTTAGGCAAAGG+AGG | + | chr3.4:97557856-97557875 | MS.gene064724:CDS | 40.0% |
!! | TAATGGTTCTAGCCTGAAAC+AGG | + | chr3.4:97556082-97556101 | MS.gene064724:CDS | 40.0% |
!! | TAGAGTTCGTGTTGTTTGTC+CGG | - | chr3.4:97554098-97554117 | None:intergenic | 40.0% |
!! | TCATTACCAGATGATGGAAC+TGG | - | chr3.4:97555693-97555712 | None:intergenic | 40.0% |
!! | TGAGGAAGAGCTATTTCTGA+TGG | + | chr3.4:97555158-97555177 | MS.gene064724:CDS | 40.0% |
!!! | GGGTTTTTTAGCAGCTGATT+CGG | - | chr3.4:97555664-97555683 | None:intergenic | 40.0% |
AAACGTACTATAAGGAGGGG+GGG | + | chr3.4:97556722-97556741 | MS.gene064724:intron | 45.0% | |
AACTCGGAGCACAAATTTGC+AGG | - | chr3.4:97554931-97554950 | None:intergenic | 45.0% | |
AAGAAACCAGCACTCGGAAA+TGG | + | chr3.4:97556038-97556057 | MS.gene064724:CDS | 45.0% | |
AAGTGTGCTCCAATACCATG+AGG | - | chr3.4:97556608-97556627 | None:intergenic | 45.0% | |
AATGGAACTGCCGAGGAATT+CGG | + | chr3.4:97554814-97554833 | MS.gene064724:CDS | 45.0% | |
ACAGAAGTAGACGACAATGC+AGG | + | chr3.4:97555348-97555367 | MS.gene064724:CDS | 45.0% | |
ACTCGGAGCACAAATTTGCA+GGG | - | chr3.4:97554930-97554949 | None:intergenic | 45.0% | |
AGAAGAAACCTGAGCTCCTA+CGG | - | chr3.4:97555775-97555794 | None:intergenic | 45.0% | |
AGGCGTCCTTAGATACGATA+GGG | - | chr3.4:97554336-97554355 | None:intergenic | 45.0% | |
AGTTGCAACATGCTGAAGTG+GGG | + | chr3.4:97556138-97556157 | MS.gene064724:CDS | 45.0% | |
ATCGTCCAACTAAAACCTGC+AGG | - | chr3.4:97557816-97557835 | None:intergenic | 45.0% | |
ATTGTTTCCACCTAGGTCAC+TGG | - | chr3.4:97555910-97555929 | None:intergenic | 45.0% | |
CAGGTTTCTTCTCAGACAAC+GGG | + | chr3.4:97555783-97555802 | MS.gene064724:CDS | 45.0% | |
CAGTTGCAACATGCTGAAGT+GGG | + | chr3.4:97556137-97556156 | MS.gene064724:CDS | 45.0% | |
CATCATTGGATGGAACTTCC+GGG | - | chr3.4:97555593-97555612 | None:intergenic | 45.0% | |
CTCATATCTAGACGTCAGGT+TGG | + | chr3.4:97557889-97557908 | MS.gene064724:intron | 45.0% | |
GAATTCCCACACTCTAACTC+AGG | - | chr3.4:97554979-97554998 | None:intergenic | 45.0% | |
GACTGAAACAGAGCTGTTAG+CGG | + | chr3.4:97555374-97555393 | MS.gene064724:CDS | 45.0% | |
GATGGTTCAAATCATCCTGC+AGG | + | chr3.4:97557798-97557817 | MS.gene064724:intron | 45.0% | |
GATTCACCTGAGTTAGAGTG+TGG | + | chr3.4:97554970-97554989 | MS.gene064724:CDS | 45.0% | |
GATTCTATTGCTTGCGAGGA+TGG | + | chr3.4:97555093-97555112 | MS.gene064724:CDS | 45.0% | |
GGAAATGGCCTCAGAAATCA+TGG | + | chr3.4:97556053-97556072 | MS.gene064724:CDS | 45.0% | |
GGAGGAACCTCAAATTCATG+AGG | + | chr3.4:97554777-97554796 | MS.gene064724:CDS | 45.0% | |
GGTAAATAGTTGGGATGCAG+AGG | + | chr3.4:97558088-97558107 | MS.gene064724:intron | 45.0% | |
GTTCTAGCCTGAAACAGGAA+CGG | + | chr3.4:97556087-97556106 | MS.gene064724:CDS | 45.0% | |
TATGGCTTCACATGGAGCAT+TGG | + | chr3.4:97557254-97557273 | MS.gene064724:CDS | 45.0% | |
TCAGGCTAGAACCATTAGGT+TGG | - | chr3.4:97556079-97556098 | None:intergenic | 45.0% | |
TCAGTTGCAACATGCTGAAG+TGG | + | chr3.4:97556136-97556155 | MS.gene064724:CDS | 45.0% | |
TCCCAACAACGTGAAGATCA+AGG | - | chr3.4:97557357-97557376 | None:intergenic | 45.0% | |
TCTGGAAGACCATAGTGTGA+CGG | - | chr3.4:97554652-97554671 | None:intergenic | 45.0% | |
TCTGTGCGACATGAAACAGA+CGG | - | chr3.4:97555333-97555352 | None:intergenic | 45.0% | |
TGCTCTACATGCAAGTCCTA+AGG | + | chr3.4:97555953-97555972 | MS.gene064724:CDS | 45.0% | |
TGTTCTTCTGTTCTCCAGAC+CGG | - | chr3.4:97555045-97555064 | None:intergenic | 45.0% | |
TTAGAACCACAAACAGGTCC+TGG | - | chr3.4:97555822-97555841 | None:intergenic | 45.0% | |
TTCTAGCCTGAAACAGGAAC+GGG | + | chr3.4:97556088-97556107 | MS.gene064724:CDS | 45.0% | |
TTGAGGGTCTTTAGCTGAAG+CGG | - | chr3.4:97555520-97555539 | None:intergenic | 45.0% | |
TTTGCAGAATGGAGCTTCCT+TGG | + | chr3.4:97554225-97554244 | MS.gene064724:intron | 45.0% | |
TTTGCTCAAGACCAACGTTG+AGG | + | chr3.4:97553630-97553649 | MS.gene064724:CDS | 45.0% | |
! | AGTGGGCCATGCTTTTATGA+TGG | + | chr3.4:97557780-97557799 | MS.gene064724:intron | 45.0% |
! | GCCTTTTGCAATTGCTTCCA+AGG | - | chr3.4:97554245-97554264 | None:intergenic | 45.0% |
! | GCTGCTCAAACGTTTTACAC+TGG | + | chr3.4:97554700-97554719 | MS.gene064724:CDS | 45.0% |
! | GTCCCAAAAGCACAAGTCAA+AGG | - | chr3.4:97556893-97556912 | None:intergenic | 45.0% |
! | TAGGTTGGCCATGATTTCTG+AGG | - | chr3.4:97556064-97556083 | None:intergenic | 45.0% |
! | TGAATTTGAGGTTCCTCCTC+AGG | - | chr3.4:97554775-97554794 | None:intergenic | 45.0% |
!! | AGTGCACAGTTTTCAGGCAA+AGG | - | chr3.4:97554592-97554611 | None:intergenic | 45.0% |
!! | GAGCAGTTGGTAGTCTCTTA+AGG | + | chr3.4:97556637-97556656 | MS.gene064724:intron | 45.0% |
!! | GGAGCATTGGCCCTATTATA+TGG | + | chr3.4:97557267-97557286 | MS.gene064724:CDS | 45.0% |
!!! | GGCCTTTGACTTGTGCTTTT+GGG | + | chr3.4:97556888-97556907 | MS.gene064724:intron | 45.0% |
!!! | TGGCCTTTGACTTGTGCTTT+TGG | + | chr3.4:97556887-97556906 | MS.gene064724:intron | 45.0% |
AAAAAGCTCCGTAGGAGCTC+AGG | + | chr3.4:97555764-97555783 | MS.gene064724:CDS | 50.0% | |
AAACAGGTCCTGGAAGGCAA+TGG | - | chr3.4:97555812-97555831 | None:intergenic | 50.0% | |
AACAGGTCCTGGAAGGCAAT+GGG | - | chr3.4:97555811-97555830 | None:intergenic | 50.0% | |
AACCACAAACAGGTCCTGGA+AGG | - | chr3.4:97555818-97555837 | None:intergenic | 50.0% | |
AGATCATCCTCGGAAGTCCA+AGG | - | chr3.4:97553610-97553629 | None:intergenic | 50.0% | |
ATTGCTTCCAGTGACCTAGG+TGG | + | chr3.4:97555900-97555919 | MS.gene064724:CDS | 50.0% | |
CAACACAGCATGCCTTACCA+TGG | - | chr3.4:97556273-97556292 | None:intergenic | 50.0% | |
CAAGACCAACGTTGAGGTTG+AGG | + | chr3.4:97553636-97553655 | MS.gene064724:CDS | 50.0% | |
CAGAGAGCTATGGCTTCACA+TGG | + | chr3.4:97557246-97557265 | MS.gene064724:CDS | 50.0% | |
CCTGAAAACTGTGCACTCGA+GGG | + | chr3.4:97554595-97554614 | MS.gene064724:CDS | 50.0% | |
CTACATCCCGTTCCTGTTTC+AGG | - | chr3.4:97556097-97556116 | None:intergenic | 50.0% | |
CTGATGTAGAGGCCATGGTA+AGG | + | chr3.4:97556258-97556277 | MS.gene064724:intron | 50.0% | |
GAACAGGAAATTGTTGGGGG+AGG | - | chr3.4:97555639-97555658 | None:intergenic | 50.0% | |
GACGCCTCTTCCTCTATAAC+AGG | + | chr3.4:97554349-97554368 | MS.gene064724:CDS | 50.0% | |
GCTATCATAAGGCTGGAGCA+GGG | + | chr3.4:97557207-97557226 | MS.gene064724:CDS | 50.0% | |
GGTCTGGAGAACAGAAGAAC+AGG | + | chr3.4:97555044-97555063 | MS.gene064724:CDS | 50.0% | |
GTTCACAGTGAAGCTACCAG+TGG | - | chr3.4:97558349-97558368 | None:intergenic | 50.0% | |
GTTGGGGGAGGCTCATTAAA+GGG | - | chr3.4:97555627-97555646 | None:intergenic | 50.0% | |
TCCTGACATTCAGGACATGC+CGG | + | chr3.4:97555023-97555042 | MS.gene064724:CDS | 50.0% | |
TGCTTGCGAGGATGGTTATC+TGG | + | chr3.4:97555101-97555120 | MS.gene064724:CDS | 50.0% | |
TGTTGGGGGAGGCTCATTAA+AGG | - | chr3.4:97555628-97555647 | None:intergenic | 50.0% | |
TTCTTCTCCTTGGACTTCCG+AGG | + | chr3.4:97553600-97553619 | MS.gene064724:CDS | 50.0% | |
! | GAAGCTGCCATTTGGAACTC+TGG | - | chr3.4:97555498-97555517 | None:intergenic | 50.0% |
! | GAGGCGTCCTTAGATACGAT+AGG | - | chr3.4:97554337-97554356 | None:intergenic | 50.0% |
!! | AGATGTTCTGGGGTCTGAGA+TGG | + | chr3.4:97556166-97556185 | MS.gene064724:CDS | 50.0% |
!! | AGCAGCTGATTCGGATGAAC+AGG | - | chr3.4:97555655-97555674 | None:intergenic | 50.0% |
!! | GTGGCCAGGAATTTTAGTGG+TGG | + | chr3.4:97556439-97556458 | MS.gene064724:intron | 50.0% |
!! | TAAGCGGGCTATCATAAGGC+TGG | + | chr3.4:97557200-97557219 | MS.gene064724:CDS | 50.0% |
ACATTCAGGACATGCCGGTC+TGG | + | chr3.4:97555028-97555047 | MS.gene064724:CDS | 55.0% | |
ACCGGCATGTCCTGAATGTC+AGG | - | chr3.4:97555027-97555046 | None:intergenic | 55.0% | |
CTCAGACCCCAGAACATCTG+CGG | - | chr3.4:97556165-97556184 | None:intergenic | 55.0% | |
CTGAAGCGGAAGCTGCCATT+TGG | - | chr3.4:97555506-97555525 | None:intergenic | 55.0% | |
GCCTGAAAACTGTGCACTCG+AGG | + | chr3.4:97554594-97554613 | MS.gene064724:CDS | 55.0% | |
GCTTCTGAATGGAACTGCCG+AGG | + | chr3.4:97554807-97554826 | MS.gene064724:CDS | 55.0% | |
GGAGATAGAGCTAGCAGGAG+AGG | + | chr3.4:97555717-97555736 | MS.gene064724:CDS | 55.0% | |
GGCTATCATAAGGCTGGAGC+AGG | + | chr3.4:97557206-97557225 | MS.gene064724:CDS | 55.0% | |
GGGGAGGCTCATTAAAGGGT+AGG | - | chr3.4:97555623-97555642 | None:intergenic | 55.0% | |
TGCCTTCCAGGACCTGTTTG+TGG | + | chr3.4:97555813-97555832 | MS.gene064724:CDS | 55.0% | |
! | CCCTCGAGTGCACAGTTTTC+AGG | - | chr3.4:97554598-97554617 | None:intergenic | 55.0% |
!! | TGTTCTGGGGTCTGAGATGG+TGG | + | chr3.4:97556169-97556188 | MS.gene064724:CDS | 55.0% |
AGTGGGGTCCGCAGATGTTC+TGG | + | chr3.4:97556154-97556173 | MS.gene064724:CDS | 60.0% | |
CTGAGGCCATTTCCGAGTGC+TGG | - | chr3.4:97556047-97556066 | None:intergenic | 60.0% | |
GTGGGGTCCGCAGATGTTCT+GGG | + | chr3.4:97556155-97556174 | MS.gene064724:CDS | 60.0% | |
TGGGGTCCGCAGATGTTCTG+GGG | + | chr3.4:97556156-97556175 | MS.gene064724:CDS | 60.0% | |
ACGGGAGCCCATTGCCTTCC+AGG | + | chr3.4:97555801-97555820 | MS.gene064724:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 97553571 | 97558601 | 97553571 | ID=MS.gene064724 |
chr3.4 | mRNA | 97553571 | 97558601 | 97553571 | ID=MS.gene064724.t1;Parent=MS.gene064724 |
chr3.4 | exon | 97553571 | 97553657 | 97553571 | ID=MS.gene064724.t1.exon1;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97553571 | 97553657 | 97553571 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97554232 | 97556274 | 97554232 | ID=MS.gene064724.t1.exon2;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97554232 | 97556274 | 97554232 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97556371 | 97556425 | 97556371 | ID=MS.gene064724.t1.exon3;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97556371 | 97556425 | 97556371 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97557175 | 97557323 | 97557175 | ID=MS.gene064724.t1.exon4;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97557175 | 97557323 | 97557175 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97557820 | 97557906 | 97557820 | ID=MS.gene064724.t1.exon5;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97557820 | 97557906 | 97557820 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97558180 | 97558308 | 97558180 | ID=MS.gene064724.t1.exon6;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97558180 | 97558308 | 97558180 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
chr3.4 | exon | 97558548 | 97558601 | 97558548 | ID=MS.gene064724.t1.exon7;Parent=MS.gene064724.t1 |
chr3.4 | CDS | 97558548 | 97558601 | 97558548 | ID=cds.MS.gene064724.t1;Parent=MS.gene064724.t1 |
Gene Sequence |
Protein sequence |