AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06499

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06499.t1 MTR_3g094650 96.273 322 12 0 1 322 1 322 0.0 639
MS.gene06499.t1 MTR_3g094670 89.130 322 35 0 1 322 1 322 0.0 567
MS.gene06499.t1 MTR_3g094630 86.646 322 43 0 1 322 1 322 0.0 548
MS.gene06499.t1 MTR_5g083860 75.478 314 76 1 9 322 13 325 1.50e-170 476
MS.gene06499.t1 MTR_3g466200 67.516 314 101 1 10 322 7 320 1.59e-155 438
MS.gene06499.t1 MTR_5g074970 64.308 325 109 4 4 322 3 326 2.21e-147 417
MS.gene06499.t1 MTR_2g084020 66.881 311 100 3 13 322 10 318 3.62e-145 412
MS.gene06499.t1 MTR_2g084110 64.516 310 108 1 13 322 10 317 5.18e-143 406
MS.gene06499.t1 MTR_2g084080 65.049 309 106 1 14 322 11 317 1.19e-142 405
MS.gene06499.t1 MTR_2g084010 65.595 311 104 2 13 322 10 318 1.27e-142 405
MS.gene06499.t1 MTR_2g084090 64.103 312 111 1 11 322 8 318 3.21e-141 402
MS.gene06499.t1 MTR_2g084000 61.905 315 113 4 9 322 11 319 9.42e-135 385
MS.gene06499.t1 MTR_7g072510 59.935 307 121 1 16 322 8 312 1.81e-134 384
MS.gene06499.t1 MTR_3g072190 59.062 320 123 2 9 322 1 318 5.25e-133 381
MS.gene06499.t1 MTR_3g466180 60.897 312 120 1 11 322 14 323 4.62e-131 376
MS.gene06499.t1 MTR_7g072480 57.006 314 133 1 9 322 5 316 6.60e-128 368
MS.gene06499.t1 MTR_4g083710 59.177 316 125 4 11 322 9 324 5.45e-127 366
MS.gene06499.t1 MTR_5g074860 58.750 320 124 5 6 320 7 323 1.44e-126 365
MS.gene06499.t1 MTR_1g115900 57.827 313 125 5 11 319 9 318 3.53e-123 356
MS.gene06499.t1 MTR_4g029170 55.836 317 135 4 9 322 7 321 3.10e-121 351
MS.gene06499.t1 MTR_4g074995 57.547 318 119 4 8 322 4 308 1.29e-120 349
MS.gene06499.t1 MTR_4g029200 55.556 297 130 1 26 322 44 338 3.06e-120 349
MS.gene06499.t1 MTR_7g026990 55.556 306 132 3 15 319 17 319 3.18e-118 343
MS.gene06499.t1 MTR_4g074990 55.911 313 120 4 13 322 8 305 6.69e-117 340
MS.gene06499.t1 MTR_5g074760 55.312 320 131 6 12 322 5 321 3.96e-116 338
MS.gene06499.t1 MTR_7g093370 53.560 323 137 6 10 322 52 371 5.05e-116 340
MS.gene06499.t1 MTR_4g029190 53.947 304 139 1 20 322 37 340 6.34e-116 338
MS.gene06499.t1 MTR_4g029180 57.143 294 122 3 31 322 30 321 9.45e-116 337
MS.gene06499.t1 MTR_5g074710 54.890 317 135 5 11 322 8 321 1.20e-115 337
MS.gene06499.t1 MTR_5g074740 56.051 314 130 5 14 322 11 321 1.23e-115 337
MS.gene06499.t1 MTR_1g054205 52.308 325 140 6 10 322 5 326 1.94e-111 327
MS.gene06499.t1 MTR_4g125940 52.174 322 139 5 12 322 12 329 9.19e-109 320
MS.gene06499.t1 MTR_3g467600 50.920 326 151 5 4 322 1 324 1.12e-108 319
MS.gene06499.t1 MTR_3g072190 61.508 252 95 1 71 322 2 251 3.43e-108 315
MS.gene06499.t1 MTR_5g021060 51.155 303 138 3 28 322 30 330 9.86e-107 315
MS.gene06499.t1 MTR_5g017850 50.784 319 145 4 11 322 13 326 5.73e-105 310
MS.gene06499.t1 MTR_4g074980 52.381 315 123 4 9 322 6 294 1.21e-104 308
MS.gene06499.t1 MTR_4g122640 51.171 299 142 2 28 322 38 336 8.63e-104 307
MS.gene06499.t1 MTR_2g029815 50.000 316 147 3 12 318 13 326 5.18e-103 306
MS.gene06499.t1 MTR_5g017860 50.314 318 147 4 14 322 11 326 1.88e-102 303
MS.gene06499.t1 MTR_8g076820 49.839 311 146 3 17 319 19 327 3.21e-102 303
MS.gene06499.t1 MTR_2g040000 49.699 332 149 6 5 322 4 331 5.65e-102 303
MS.gene06499.t1 MTR_1g022970 50.000 304 141 3 28 322 46 347 1.76e-101 302
MS.gene06499.t1 MTR_2g029750 51.592 314 141 4 14 318 15 326 2.14e-101 302
MS.gene06499.t1 MTR_2g029800 49.226 323 149 4 9 318 6 326 7.55e-101 300
MS.gene06499.t1 MTR_2g029560 50.162 309 143 4 19 318 15 321 4.98e-100 298
MS.gene06499.t1 MTR_2g029860 49.850 333 153 5 1 322 1 330 1.38e-99 297
MS.gene06499.t1 MTR_2g029820 47.531 324 155 4 8 318 5 326 8.18e-99 295
MS.gene06499.t1 MTR_2g028980 51.118 313 142 4 15 318 16 326 8.83e-99 295
MS.gene06499.t1 MTR_5g014100 50.000 306 136 4 28 319 26 328 2.96e-98 293
MS.gene06499.t1 MTR_2g029740 48.765 324 151 5 8 318 5 326 3.33e-98 294
MS.gene06499.t1 MTR_2g029830 49.836 305 142 3 23 318 23 325 2.65e-97 291
MS.gene06499.t1 MTR_4g074980 58.468 248 101 2 9 254 6 253 3.95e-97 287
MS.gene06499.t1 MTR_2g029910 46.914 324 158 4 8 318 6 328 5.39e-97 291
MS.gene06499.t1 MTR_2g029730 49.515 309 145 3 19 318 16 322 3.33e-96 288
MS.gene06499.t1 MTR_4g125940 55.235 277 109 5 57 322 2 274 3.36e-96 286
MS.gene06499.t1 MTR_5g074860 50.000 320 113 7 6 320 7 284 6.78e-96 285
MS.gene06499.t1 MTR_2g029850 48.297 323 152 4 9 318 6 326 6.78e-96 288
MS.gene06499.t1 MTR_4g030890 45.955 309 155 4 21 322 93 396 6.65e-94 285
MS.gene06499.t1 MTR_4g031140 44.444 324 164 5 10 322 6 324 1.05e-92 279
MS.gene06499.t1 MTR_5g049280 44.695 311 160 5 23 322 28 337 6.19e-92 277
MS.gene06499.t1 MTR_0155s0040 42.587 317 174 5 7 322 6 315 1.12e-86 263
MS.gene06499.t1 MTR_1g077000 42.901 324 169 6 8 322 11 327 2.45e-85 260
MS.gene06499.t1 MTR_4g046713 41.534 313 172 4 14 318 13 322 2.04e-84 258
MS.gene06499.t1 MTR_7g029030 42.006 319 178 4 8 322 5 320 7.55e-84 256
MS.gene06499.t1 MTR_2g088770 44.586 314 165 6 12 318 10 321 1.68e-82 253
MS.gene06499.t1 MTR_1g101830 41.515 330 177 7 1 322 1 322 3.15e-80 247
MS.gene06499.t1 MTR_1g025980 42.633 319 169 6 7 318 3 314 1.59e-79 245
MS.gene06499.t1 MTR_3g092990 41.009 317 176 4 14 322 13 326 3.98e-79 244
MS.gene06499.t1 MTR_7g107520 42.492 313 167 5 13 318 10 316 7.16e-79 243
MS.gene06499.t1 MTR_5g022870 41.411 326 165 9 9 322 5 316 8.08e-78 240
MS.gene06499.t1 MTR_2g029830 48.819 254 119 3 74 318 6 257 7.47e-77 237
MS.gene06499.t1 MTR_4g114210 42.679 321 162 8 17 322 7 320 1.68e-76 237
MS.gene06499.t1 MTR_8g075100 41.776 304 158 7 28 322 26 319 9.04e-75 233
MS.gene06499.t1 MTR_7g086820 40.404 297 173 3 24 319 16 309 1.82e-74 232
MS.gene06499.t1 MTR_2g008710 40.615 325 170 7 10 318 4 321 8.83e-73 228
MS.gene06499.t1 MTR_6g043280 42.712 295 158 6 28 318 41 328 1.26e-72 228
MS.gene06499.t1 MTR_6g027440 39.228 311 184 4 14 322 7 314 4.84e-72 226
MS.gene06499.t1 MTR_6g043460 38.554 332 190 5 1 322 1 328 1.24e-70 223
MS.gene06499.t1 MTR_1g086320 38.272 324 188 3 7 318 6 329 1.61e-70 222
MS.gene06499.t1 MTR_4g132490 35.714 322 198 3 9 322 7 327 2.68e-69 219
MS.gene06499.t1 MTR_1g038680 40.404 297 166 4 32 318 33 328 3.61e-69 219
MS.gene06499.t1 MTR_3g072210 58.289 187 74 3 138 322 54 238 7.21e-69 215
MS.gene06499.t1 MTR_3g092990 39.172 314 169 5 14 319 13 312 1.15e-68 217
MS.gene06499.t1 MTR_1g009750 39.319 323 181 6 11 322 10 328 1.71e-68 217
MS.gene06499.t1 MTR_2g437770 40.468 299 159 6 28 318 50 337 3.52e-68 216
MS.gene06499.t1 MTR_5g016010 37.195 328 180 7 9 318 6 325 1.09e-67 215
MS.gene06499.t1 MTR_4g095450 39.252 321 177 6 9 318 7 320 3.10e-67 213
MS.gene06499.t1 MTR_4g087965 39.604 303 171 5 27 318 41 342 9.92e-67 213
MS.gene06499.t1 MTR_2g067440 36.858 331 166 7 28 320 60 385 5.06e-66 213
MS.gene06499.t1 MTR_2g008160 40.000 310 167 7 21 318 17 319 7.53e-66 210
MS.gene06499.t1 MTR_1g086490 37.576 330 185 5 9 318 8 336 9.88e-66 210
MS.gene06499.t1 MTR_1g090760 37.578 322 185 7 15 322 11 330 1.24e-65 210
MS.gene06499.t1 MTR_7g086870 36.949 295 179 4 26 319 20 308 2.48e-65 208
MS.gene06499.t1 MTR_2g099175 37.662 308 173 6 27 322 35 335 3.49e-64 206
MS.gene06499.t1 MTR_2g077990 36.637 333 167 7 28 320 76 404 6.43e-64 207
MS.gene06499.t1 MTR_4g133800 38.591 298 165 6 29 318 42 329 6.69e-64 205
MS.gene06499.t1 MTR_5g074700 51.111 225 92 6 101 322 5 214 6.84e-64 201
MS.gene06499.t1 MTR_0286s0010 37.152 323 184 6 14 322 17 334 4.36e-63 203
MS.gene06499.t1 MTR_6g008075 37.152 323 184 6 14 322 17 334 4.36e-63 203
MS.gene06499.t1 MTR_4g127670 39.610 308 167 7 27 322 23 323 4.52e-62 200
MS.gene06499.t1 MTR_6g043240 36.562 320 183 7 11 318 16 327 5.40e-62 201
MS.gene06499.t1 MTR_2g078610 35.758 330 174 6 28 320 76 404 8.07e-62 202
MS.gene06499.t1 MTR_1g066710 35.505 307 180 6 26 322 25 323 3.72e-61 198
MS.gene06499.t1 MTR_8g062780 36.190 315 193 5 11 318 7 320 7.81e-60 194
MS.gene06499.t1 MTR_1g066380 35.294 306 182 5 26 322 25 323 1.03e-59 194
MS.gene06499.t1 MTR_4g132110 35.238 315 197 5 9 318 12 324 1.30e-59 194
MS.gene06499.t1 MTR_1g066640 35.294 306 182 5 26 322 25 323 1.33e-59 194
MS.gene06499.t1 MTR_1g066680 34.884 301 183 7 26 319 25 319 1.54e-59 194
MS.gene06499.t1 MTR_2g078280 36.449 321 160 8 28 308 76 392 2.48e-59 195
MS.gene06499.t1 MTR_3g105790 36.890 328 178 6 13 322 6 322 4.31e-59 192
MS.gene06499.t1 MTR_1g009750 37.224 317 171 7 11 318 10 307 9.48e-59 191
MS.gene06499.t1 MTR_2g008730 37.231 325 157 7 10 318 4 297 3.44e-58 189
MS.gene06499.t1 MTR_7g072490 44.215 242 79 2 74 315 2 187 5.36e-58 186
MS.gene06499.t1 MTR_4g132110 34.688 320 197 6 9 318 12 329 2.17e-57 189
MS.gene06499.t1 MTR_2g008160 37.829 304 147 8 21 318 17 284 1.70e-54 179
MS.gene06499.t1 MTR_0147s0010 32.710 321 177 5 25 320 74 380 2.97e-53 179
MS.gene06499.t1 MTR_5g033470 35.826 321 176 8 22 322 67 377 5.00e-53 178
MS.gene06499.t1 MTR_2g067450 35.314 303 181 6 28 320 11 308 2.35e-49 167
MS.gene06499.t1 MTR_3g072260 61.719 128 40 2 17 135 6 133 3.57e-45 150
MS.gene06499.t1 MTR_1g066380 34.100 261 154 6 72 322 3 255 2.77e-43 149
MS.gene06499.t1 MTR_2g008160 44.633 177 94 3 21 197 17 189 6.52e-43 147
MS.gene06499.t1 MTR_3g105790 38.430 242 128 3 95 322 12 246 8.03e-42 145
MS.gene06499.t1 MTR_2g029880 42.553 188 87 4 140 318 9 184 2.64e-39 138
MS.gene06499.t1 MTR_2g077980 29.474 285 154 8 80 320 1 282 3.81e-28 110
MS.gene06499.t1 MTR_5g074770 51.546 97 44 2 226 320 12 107 1.02e-25 99.4
MS.gene06499.t1 MTR_2g078560 30.275 218 116 4 137 318 99 316 2.78e-24 100
MS.gene06499.t1 MTR_7g086790 43.333 120 64 2 75 194 17 132 5.35e-24 97.4
MS.gene06499.t1 MTR_3g462850 38.732 142 75 5 192 322 9 149 1.09e-23 95.1
MS.gene06499.t1 MTR_4g114220 42.029 138 56 4 45 174 20 141 3.36e-23 93.6
MS.gene06499.t1 MTR_4g031040 35.673 171 71 4 89 259 3 134 3.95e-23 93.2
MS.gene06499.t1 MTR_5g058120 36.250 160 92 3 164 321 7 158 5.98e-23 95.9
MS.gene06499.t1 MTR_1g089005 40.580 138 69 3 14 139 1 137 8.41e-22 90.5
MS.gene06499.t1 MTR_3g107060 28.102 274 128 10 43 301 91 310 2.40e-21 92.8
MS.gene06499.t1 MTR_1g098320 47.368 76 40 0 243 318 45 120 2.89e-18 80.5
MS.gene06499.t1 MTR_6g048160 52.778 72 30 2 67 138 22 89 1.38e-17 77.0
MS.gene06499.t1 MTR_7g107500 47.500 80 41 1 239 318 15 93 9.04e-17 75.1
MS.gene06499.t1 MTR_2g029930 39.216 102 34 3 24 111 15 102 3.48e-16 73.6
MS.gene06499.t1 MTR_5g022510 26.449 276 138 12 44 304 17 242 8.60e-16 76.6
MS.gene06499.t1 MTR_4g073410 25.692 253 134 9 62 304 35 243 7.09e-15 73.9
MS.gene06499.t1 MTR_0147s0040 41.892 74 43 0 247 320 8 81 5.14e-14 67.0
MS.gene06499.t1 MTR_7g086810 31.967 122 57 1 24 145 2 97 9.27e-14 70.1
MS.gene06499.t1 MTR_7g086785 45.833 72 38 1 74 145 4 74 9.34e-13 65.1
MS.gene06499.t1 MTR_4g012865 36.620 71 45 0 25 95 74 144 2.18e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06499.t1 AT5G05340 74.747 297 75 0 26 322 28 324 6.65e-164 459
MS.gene06499.t1 AT5G58400 62.939 313 114 2 12 322 13 325 5.26e-144 409
MS.gene06499.t1 AT5G58390 60.635 315 123 1 9 322 2 316 5.35e-136 389
MS.gene06499.t1 AT1G14550 55.128 312 133 5 12 318 8 317 2.27e-118 344
MS.gene06499.t1 AT5G06720 52.134 328 145 4 5 322 8 333 2.77e-116 339
MS.gene06499.t1 AT1G14540 53.698 311 140 3 14 322 7 315 9.62e-115 335
MS.gene06499.t1 AT5G06730 50.305 328 151 5 5 322 9 334 1.42e-111 328
MS.gene06499.t1 AT2G18150 46.291 337 158 4 7 322 2 336 7.01e-108 318
MS.gene06499.t1 AT4G36430 49.527 317 150 3 14 322 16 330 8.80e-108 317
MS.gene06499.t1 AT2G18140 48.387 310 150 3 21 322 28 335 9.81e-105 310
MS.gene06499.t1 AT1G44970 52.104 309 137 3 20 319 37 343 2.85e-104 309
MS.gene06499.t1 AT3G50990 50.000 330 147 6 9 322 14 341 4.75e-102 303
MS.gene06499.t1 AT5G66390 49.505 303 143 3 28 322 33 333 5.42e-102 303
MS.gene06499.t1 AT4G08770 50.160 313 143 4 21 322 17 327 3.16e-100 299
MS.gene06499.t1 AT4G08780 48.710 310 146 4 24 322 20 327 4.16e-99 296
MS.gene06499.t1 AT5G19890 48.615 325 145 7 9 322 14 327 8.60e-99 294
MS.gene06499.t1 AT5G19880 46.933 326 156 5 9 322 9 329 1.33e-98 294
MS.gene06499.t1 AT4G16270 49.508 305 138 5 28 322 50 348 1.07e-97 292
MS.gene06499.t1 AT1G49570 49.180 305 145 3 26 321 46 349 1.50e-97 292
MS.gene06499.t1 AT2G38390 47.112 329 162 5 4 322 7 333 7.68e-97 290
MS.gene06499.t1 AT2G35380 48.254 315 150 4 20 322 22 335 1.17e-96 289
MS.gene06499.t1 AT2G22420 45.201 323 165 4 7 322 2 319 1.61e-96 289
MS.gene06499.t1 AT3G32980 47.531 324 157 4 10 322 13 334 9.74e-96 287
MS.gene06499.t1 AT2G38380 46.505 329 164 5 4 322 7 333 1.98e-94 284
MS.gene06499.t1 AT3G49110 47.003 317 155 4 17 322 22 336 6.65e-93 280
MS.gene06499.t1 AT1G68850 43.421 304 159 4 28 319 30 332 1.52e-92 279
MS.gene06499.t1 AT3G49120 46.130 323 161 4 11 322 15 335 3.95e-92 278
MS.gene06499.t1 AT3G01190 41.463 328 176 7 4 322 1 321 7.07e-83 253
MS.gene06499.t1 AT5G15180 40.557 323 176 7 11 322 12 329 2.77e-80 247
MS.gene06499.t1 AT1G05260 41.566 332 174 8 4 322 1 325 5.60e-79 244
MS.gene06499.t1 AT4G33420 42.320 319 173 8 8 322 14 325 6.34e-78 241
MS.gene06499.t1 AT4G33420 42.320 319 173 8 8 322 61 372 4.49e-77 240
MS.gene06499.t1 AT5G42180 41.176 323 165 7 11 320 5 315 8.77e-77 238
MS.gene06499.t1 AT5G14130 39.623 318 180 4 9 318 13 326 1.05e-76 238
MS.gene06499.t1 AT3G21770 40.260 308 171 6 20 318 21 324 1.21e-76 238
MS.gene06499.t1 AT5G51890 38.580 324 186 6 4 319 1 319 3.05e-76 236
MS.gene06499.t1 AT5G14130 39.623 318 180 4 9 318 54 367 3.05e-76 238
MS.gene06499.t1 AT1G71695 42.140 299 166 4 28 322 44 339 1.52e-75 236
MS.gene06499.t1 AT2G41480 40.867 323 170 9 14 322 13 328 1.57e-75 235
MS.gene06499.t1 AT5G64120 42.953 298 155 6 32 322 39 328 2.42e-75 234
MS.gene06499.t1 AT4G11290 40.308 325 176 7 9 318 1 322 4.37e-75 234
MS.gene06499.t1 AT5G17820 39.748 317 172 5 13 322 9 313 9.00e-75 233
MS.gene06499.t1 AT3G03670 40.491 326 177 5 8 322 2 321 9.23e-75 233
MS.gene06499.t1 AT5G17820 39.748 317 172 5 13 322 62 366 8.96e-74 232
MS.gene06499.t1 AT2G35380 49.796 245 110 4 90 322 4 247 1.25e-71 222
MS.gene06499.t1 AT1G05240 38.961 308 167 6 28 322 26 325 1.29e-71 225
MS.gene06499.t1 AT1G05250 38.961 308 167 6 28 322 26 325 1.29e-71 225
MS.gene06499.t1 AT4G37530 39.936 313 166 5 21 318 20 325 3.29e-70 221
MS.gene06499.t1 AT5G47000 38.924 316 184 5 9 318 14 326 2.46e-69 219
MS.gene06499.t1 AT3G28200 39.535 301 173 4 23 318 16 312 6.12e-69 218
MS.gene06499.t1 AT4G26010 40.000 305 174 5 16 319 10 306 6.43e-69 218
MS.gene06499.t1 AT2G18980 39.692 325 174 8 12 322 7 323 8.74e-69 218
MS.gene06499.t1 AT4G17690 40.264 303 175 4 20 318 18 318 1.25e-68 217
MS.gene06499.t1 AT4G37520 38.961 308 166 5 26 318 25 325 1.53e-68 217
MS.gene06499.t1 AT1G34510 39.806 309 175 7 16 322 10 309 1.56e-68 216
MS.gene06499.t1 AT4G26010 40.000 305 174 5 16 319 38 334 1.71e-68 217
MS.gene06499.t1 AT1G77100 41.538 325 171 10 11 322 1 319 1.92e-68 216
MS.gene06499.t1 AT5G40150 38.816 304 172 5 23 318 27 324 2.91e-68 216
MS.gene06499.t1 AT4G30170 40.453 309 166 7 25 322 24 325 2.57e-67 214
MS.gene06499.t1 AT1G24110 37.267 322 188 6 12 322 4 322 3.04e-67 214
MS.gene06499.t1 AT4G37520 39.610 308 161 7 26 318 25 322 3.98e-67 213
MS.gene06499.t1 AT4G33870 34.731 334 175 4 28 320 68 399 1.04e-66 215
MS.gene06499.t1 AT1G30870 39.016 305 166 6 28 322 51 345 1.13e-66 213
MS.gene06499.t1 AT4G25980 37.500 320 180 7 12 318 10 322 3.75e-66 211
MS.gene06499.t1 AT3G49960 37.651 332 179 7 7 318 2 325 5.18e-66 211
MS.gene06499.t1 AT5G67400 38.110 328 183 7 7 318 2 325 5.29e-66 211
MS.gene06499.t1 AT5G39580 39.375 320 178 8 12 322 7 319 1.28e-64 207
MS.gene06499.t1 AT4G21960 37.086 302 184 4 21 318 24 323 4.55e-64 206
MS.gene06499.t1 AT2G34060 40.391 307 169 7 25 319 39 343 4.78e-64 206
MS.gene06499.t1 AT4G31760 35.976 328 193 4 4 322 7 326 1.04e-63 204
MS.gene06499.t1 AT2G24800 38.235 306 175 3 26 322 29 329 2.91e-63 204
MS.gene06499.t1 AT2G39040 39.297 313 176 7 22 322 40 350 9.21e-63 203
MS.gene06499.t1 AT5G64100 36.364 330 178 7 11 318 8 327 2.10e-60 196
MS.gene06499.t1 AT4G37530 40.602 266 136 5 21 271 20 278 8.36e-60 193
MS.gene06499.t1 AT5G64110 38.462 325 173 8 12 318 11 326 5.10e-59 192
MS.gene06499.t1 AT2G37130 34.304 309 194 5 20 322 22 327 6.44e-58 190
MS.gene06499.t1 AT3G17070 35.802 324 188 8 14 320 17 337 1.66e-57 189
MS.gene06499.t1 AT2G37130 34.564 298 186 5 31 322 2 296 2.15e-56 185
MS.gene06499.t1 AT2G43480 33.962 318 188 7 19 322 26 335 6.86e-55 182
MS.gene06499.t1 AT5G22410 35.276 326 189 10 7 319 6 322 1.41e-54 181
MS.gene06499.t1 AT5G24070 34.405 311 182 7 26 322 33 335 5.47e-54 180
MS.gene06499.t1 AT3G17070 34.483 261 157 7 70 320 18 274 6.74e-42 147
MS.gene06499.t1 AT4G25980 42.077 183 102 3 13 195 56 234 7.25e-42 147
MS.gene06499.t1 AT5G39580 37.662 231 133 5 12 240 7 228 1.52e-41 144
MS.gene06499.t1 AT2G24800 41.667 168 94 1 26 193 29 192 2.01e-35 129
MS.gene06499.t1 AT4G32320 29.137 278 128 8 39 301 96 319 4.44e-23 97.8
MS.gene06499.t1 AT1G77490 25.769 260 150 8 62 304 106 339 1.71e-16 80.1
MS.gene06499.t1 AT1G77490 25.769 260 150 8 62 304 106 339 2.51e-16 79.7
MS.gene06499.t1 AT3G42570 35.052 97 62 1 100 195 53 149 1.47e-14 70.5

Find 79 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTATTTCTCCTCATAAT+AGG 0.184669 3.2:+79142872 MS.gene06499:CDS
TCCCCTGATCCTGATGTCTT+TGG 0.225606 3.2:-79147087 None:intergenic
AAGCAAGGTGCACAACATTT+AGG 0.229716 3.2:+79147001 MS.gene06499:CDS
GTTAATCTAGAACAACTTAA+AGG 0.237686 3.2:-79142836 None:intergenic
AGAGAGTTTGGGACAAGTTT+TGG 0.254499 3.2:-79142930 None:intergenic
TTGGACAATGGAAGAGAGTT+TGG 0.300332 3.2:-79142942 None:intergenic
TTCTATTTCTCCTCATAATA+GGG 0.333578 3.2:+79142873 MS.gene06499:CDS
CCCCTGATCCTGATGTCTTT+GGG 0.343878 3.2:-79147086 None:intergenic
AGGATCAGGGGACAATAATT+TGG 0.345432 3.2:+79147098 MS.gene06499:CDS
ACATTGAGGTGAGTACATTA+AGG 0.355998 3.2:-79146308 None:intergenic
CCTCGAACAGAGTTCCTATT+CGG 0.365116 3.2:-79145956 None:intergenic
TTCAAACTTAAATATTAGTT+AGG 0.366105 3.2:-79147366 None:intergenic
TAGATTAACAATGTTCAGTT+TGG 0.377384 3.2:+79142850 MS.gene06499:CDS
AGCAAGGTGCACAACATTTA+GGG 0.388383 3.2:+79147002 MS.gene06499:CDS
GATAGCTTGGTGGCCCAAAC+TGG 0.400625 3.2:+79146205 MS.gene06499:intron
TGACTAGGTGCTCACACAAT+TGG 0.411685 3.2:+79146976 MS.gene06499:intron
CTCGAACAGAGTTCCTATTC+GGG 0.444608 3.2:-79145955 None:intergenic
TGGACAATGGAAGAGAGTTT+GGG 0.453796 3.2:-79142941 None:intergenic
TGCCCAAAGACATCAGGATC+AGG 0.457132 3.2:+79147084 MS.gene06499:CDS
TCGATATAGCGGATTGCACT+TGG 0.458106 3.2:-79142967 None:intergenic
AGAAGAACGCACTCCCGAAT+AGG 0.461469 3.2:+79145942 MS.gene06499:CDS
AAGCCACTCACTGGATCAAA+TGG 0.464847 3.2:+79147318 MS.gene06499:CDS
AAGGACTTAGTCGCATTGTC+AGG 0.466819 3.2:+79146354 MS.gene06499:CDS
ACCTCAATGTTTAAGAATGT+TGG 0.473954 3.2:+79146321 MS.gene06499:CDS
TACTATACATGATAGCTTGG+TGG 0.475715 3.2:+79146195 MS.gene06499:intron
TAGCGGATTGCACTTGGCGT+TGG 0.477054 3.2:-79142961 None:intergenic
AATTTGATGTGTCATCTAGT+AGG 0.477448 3.2:-79145910 None:intergenic
TCAGCACATGATACAACTCC+TGG 0.479117 3.2:-79146025 None:intergenic
TATATCGAAGGAGGCACGAA+TGG 0.486600 3.2:+79142982 MS.gene06499:CDS
ACCCGCCGTTGAAAAGTTGT+TGG 0.489526 3.2:-79147206 None:intergenic
TTAAGGTTGGAAGTTGGTGC+TGG 0.495278 3.2:-79146291 None:intergenic
CATTGGCACTCCCTATTATG+AGG 0.497408 3.2:-79142883 None:intergenic
TCTAATTGCCCAAAGACATC+AGG 0.499580 3.2:+79147078 MS.gene06499:CDS
TTGCAATTATAGGGGTGCGA+TGG 0.506694 3.2:+79145881 MS.gene06499:intron
TGCCACTGCTATGATCAAGA+TGG 0.506761 3.2:+79147287 MS.gene06499:CDS
CGGGAGTGCGTTCTTCTCTC+CGG 0.514629 3.2:-79145936 None:intergenic
GCCACTCACTATTGAGTTGG+TGG 0.515724 3.2:-79147229 None:intergenic
GGAGATATTAAGCCACTCAC+TGG 0.517383 3.2:+79147309 MS.gene06499:CDS
TGCAATTATAGGGGTGCGAT+GGG 0.518318 3.2:+79145882 MS.gene06499:intron
GCCACTGCTATGATCAAGAT+GGG 0.523834 3.2:+79147288 MS.gene06499:CDS
TGAGGTGAGTACATTAAGGT+TGG 0.527335 3.2:-79146304 None:intergenic
CCAAACTGGAATGTAAAACT+TGG 0.529320 3.2:+79146219 MS.gene06499:CDS
ACCAACATTCTTAAACATTG+AGG 0.529518 3.2:-79146322 None:intergenic
CAGGAACCTTGTTCAAAACA+AGG 0.532745 3.2:+79147167 MS.gene06499:CDS
GTTTGTAGAGAGTTGTGCAT+TGG 0.533430 3.2:-79142900 None:intergenic
TTGCACTTGGCGTTGGACAA+TGG 0.534086 3.2:-79142954 None:intergenic
CCGAATAGGAACTCTGTTCG+AGG 0.537065 3.2:+79145956 MS.gene06499:CDS
TACAATTGCAACAGAGTATG+TGG 0.537794 3.2:-79146065 None:intergenic
TGACAATGCGACTAAGTCCT+TGG 0.546126 3.2:-79146352 None:intergenic
GTTGGAAGTTGGTGCTGGGA+TGG 0.546874 3.2:-79146286 None:intergenic
AGCAAAAGAAGTATCTATGT+TGG 0.550553 3.2:-79147043 None:intergenic
ATATCGAAGGAGGCACGAAT+GGG 0.556566 3.2:+79142983 MS.gene06499:CDS
GCCGTAGAGAACATATGTCC+AGG 0.557511 3.2:+79146007 MS.gene06499:CDS
GCCCAAAGACATCAGGATCA+GGG 0.561189 3.2:+79147085 MS.gene06499:CDS
AGTACATTAAGGTTGGAAGT+TGG 0.561812 3.2:-79146297 None:intergenic
TCCTGGACATATGTTCTCTA+CGG 0.565428 3.2:-79146008 None:intergenic
CAATGCGACTAAGTCCTTGG+TGG 0.565757 3.2:-79146349 None:intergenic
TAGCAGTTGTCAAAAGAAGT+GGG 0.571172 3.2:-79147141 None:intergenic
AACAGAGTATGTGGCAGCAA+TGG 0.575576 3.2:-79146056 None:intergenic
ATAGCCACTCACTATTGAGT+TGG 0.580124 3.2:-79147232 None:intergenic
AGTATGTGGCAGCAATGGCT+AGG 0.591350 3.2:-79146051 None:intergenic
TCTCCATTTGATCCAGTGAG+TGG 0.599035 3.2:-79147321 None:intergenic
GTAGCAGTTGTCAAAAGAAG+TGG 0.602615 3.2:-79147142 None:intergenic
TCGTGCCTCCTTCGATATAG+CGG 0.602634 3.2:-79142978 None:intergenic
CTCACACAATTGGACAAGCA+AGG 0.617199 3.2:+79146986 MS.gene06499:CDS
AGCAATCGTGGAAGAACAAG+CGG 0.622282 3.2:-79143018 None:intergenic
GAATGTTGGTCTTTCCACCA+AGG 0.624861 3.2:+79146335 MS.gene06499:CDS
AGCAGATTGACTAGCAGTCG+TGG 0.628218 3.2:-79146253 None:intergenic
TAAGGTTGGAAGTTGGTGCT+GGG 0.629361 3.2:-79146290 None:intergenic
TCCCATCTTGATCATAGCAG+TGG 0.630222 3.2:-79147289 None:intergenic
AGTGCAATCCGCTATATCGA+AGG 0.633823 3.2:+79142970 MS.gene06499:CDS
CCCAAAGACATCAGGATCAG+GGG 0.634254 3.2:+79147086 MS.gene06499:CDS
AGCAGTTGTCAAAAGAAGTG+GGG 0.647889 3.2:-79147140 None:intergenic
GCAATCCGCTATATCGAAGG+AGG 0.656146 3.2:+79142973 MS.gene06499:CDS
GCAGTTGTCAAAAGAAGTGG+GGG 0.658009 3.2:-79147139 None:intergenic
AGGAACCTTGTTCAAAACAA+GGG 0.662588 3.2:+79147168 MS.gene06499:CDS
TTACATTGACAAAGCAATCG+TGG 0.667907 3.2:-79143030 None:intergenic
TCCACCAACTCAATAGTGAG+TGG 0.672331 3.2:+79147228 MS.gene06499:CDS
AATCGTGGAAGAACAAGCGG+AGG 0.704179 3.2:-79143015 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATTGAGAATAA+TGG + chr3.2:79145673-79145692 MS.gene06499:intron 10.0%
!! ATCATAAATAAAATATTTAG+TGG + chr3.2:79145571-79145590 MS.gene06499:intron 10.0%
!! GTTATTTGTATTAAAAATTA+AGG - chr3.2:79144192-79144211 None:intergenic 10.0%
!! TATAACATAAAAGATTAAAT+CGG - chr3.2:79146581-79146600 None:intergenic 10.0%
!!! GATTTTTTTTAATGAAATTT+GGG + chr3.2:79146630-79146649 MS.gene06499:intron 10.0%
!!! TAGTTCATTTAATAAATTTT+AGG - chr3.2:79143249-79143268 None:intergenic 10.0%
!! AAAAAAAAAAATGATATGCA+AGG + chr3.2:79144051-79144070 MS.gene06499:intron 15.0%
!! AAAAATTAAAATTAACATGC+CGG + chr3.2:79143650-79143669 MS.gene06499:intron 15.0%
!! AACAATTATGAAAATTAACA+TGG + chr3.2:79144988-79145007 MS.gene06499:intron 15.0%
!! AATTGTGTTCAAAAAATATA+TGG - chr3.2:79143090-79143109 None:intergenic 15.0%
!! ATATATTACTTGCAATTATA+GGG + chr3.2:79145872-79145891 MS.gene06499:intron 15.0%
!! ATATTAATATGATGAAGATT+TGG + chr3.2:79146658-79146677 MS.gene06499:intron 15.0%
!! ATTAATCAATTTACATTTCA+TGG - chr3.2:79146153-79146172 None:intergenic 15.0%
!! ATTATGGAAAAAAATGTTTA+AGG - chr3.2:79144364-79144383 None:intergenic 15.0%
!! GTTACATAATTATAACATAA+AGG - chr3.2:79146531-79146550 None:intergenic 15.0%
!! TAATTGTCAAATAACTAATT+TGG + chr3.2:79146940-79146959 MS.gene06499:intron 15.0%
!! TATATATTACTTGCAATTAT+AGG + chr3.2:79145871-79145890 MS.gene06499:intron 15.0%
!! TTAAAAAAAATCCCATAAAA+AGG - chr3.2:79146622-79146641 None:intergenic 15.0%
!! TTATGGAAAAAAATGTTTAA+GGG - chr3.2:79144363-79144382 None:intergenic 15.0%
!! TTATTATTTCAACTTATTCT+AGG - chr3.2:79143304-79143323 None:intergenic 15.0%
!! TTCTTTCAAAAAAAATTAAG+TGG - chr3.2:79145175-79145194 None:intergenic 15.0%
!!! ACTAGCTATTTTTTTTTTAA+AGG - chr3.2:79144004-79144023 None:intergenic 15.0%
!!! GCATATCATTTTTTTTTTTT+TGG - chr3.2:79144050-79144069 None:intergenic 15.0%
!!! GGATTTTTTTTAATGAAATT+TGG + chr3.2:79146629-79146648 MS.gene06499:intron 15.0%
!!! TATTTTATTTTTTATGCATG+TGG - chr3.2:79145020-79145039 None:intergenic 15.0%
!!! TGTTCTTTTTAAATATAATC+CGG - chr3.2:79143672-79143691 None:intergenic 15.0%
!!! TTAAAAATTAAGGGTATTTT+TGG - chr3.2:79144182-79144201 None:intergenic 15.0%
!!! TTGATTGTAGTATATTTTTT+CGG + chr3.2:79143116-79143135 MS.gene06499:intron 15.0%
!! AACGTTAAATGAATATATAG+CGG + chr3.2:79145261-79145280 MS.gene06499:intron 20.0%
!! ACATTTCAAGATATTAACTT+CGG - chr3.2:79144895-79144914 None:intergenic 20.0%
!! ATGTATATGTGACTTAAAAT+TGG + chr3.2:79144911-79144930 MS.gene06499:intron 20.0%
!! TAAAAATTAATCTCTCAAAC+CGG - chr3.2:79143935-79143954 None:intergenic 20.0%
!! TAATAGACAATTGTCAATAA+AGG - chr3.2:79143554-79143573 None:intergenic 20.0%
!! TATAACATAAAGGATGAAAT+CGG - chr3.2:79146521-79146540 None:intergenic 20.0%
!! TATATTACTTGCAATTATAG+GGG + chr3.2:79145873-79145892 MS.gene06499:intron 20.0%
!! TATGAAAATTAACATGGAAA+AGG + chr3.2:79144994-79145013 MS.gene06499:intron 20.0%
!! TCCATAATAAAAATTGTTGT+TGG + chr3.2:79144376-79144395 MS.gene06499:intron 20.0%
!! TCGAAAAAAGAAAAAGATAA+AGG + chr3.2:79146780-79146799 MS.gene06499:intron 20.0%
!! TTATCTTGAACATCTTAATT+AGG - chr3.2:79144832-79144851 None:intergenic 20.0%
!!! AAAATGTTTAAGGGTATAAT+TGG - chr3.2:79144354-79144373 None:intergenic 20.0%
!!! AAACAATGTTATCCTTTTTA+TGG + chr3.2:79146607-79146626 MS.gene06499:intron 20.0%
!!! AAATGTTTAAGGGTATAATT+GGG - chr3.2:79144353-79144372 None:intergenic 20.0%
!!! AACAATGTTATCCTTTTTAT+GGG + chr3.2:79146608-79146627 MS.gene06499:intron 20.0%
!!! ACCAACAACAATTTTTATTA+TGG - chr3.2:79144380-79144399 None:intergenic 20.0%
!!! TATTGTTTGAAGTTAAGTTA+AGG - chr3.2:79146474-79146493 None:intergenic 20.0%
!!! TTACTACTGTTGATTTAAAA+CGG + chr3.2:79145735-79145754 MS.gene06499:intron 20.0%
! AAAAATTAATCTCTCAAACC+GGG - chr3.2:79143934-79143953 None:intergenic 25.0%
! AAGAATTTCATCTCGTATTT+AGG - chr3.2:79145804-79145823 None:intergenic 25.0%
! AGTAATAGTAAGAGTTATCA+GGG + chr3.2:79144021-79144040 MS.gene06499:intron 25.0%
! ATGTGATAACATCTTTGATA+TGG - chr3.2:79143467-79143486 None:intergenic 25.0%
! GTTGCATGAAATTAAGTTAA+TGG + chr3.2:79146870-79146889 MS.gene06499:intron 25.0%
! TAGATTAACAATGTTCAGTT+TGG + chr3.2:79142850-79142869 MS.gene06499:CDS 25.0%
! TAGTAATAGTAAGAGTTATC+AGG + chr3.2:79144020-79144039 MS.gene06499:intron 25.0%
! TCAAACCCTATTAAAACATT+TGG + chr3.2:79144867-79144886 MS.gene06499:intron 25.0%
! TGTGATAACATCTTTGATAT+GGG - chr3.2:79143466-79143485 None:intergenic 25.0%
!! AGAAATGCTACTTAATGAAA+TGG + chr3.2:79145191-79145210 MS.gene06499:intron 25.0%
!! GTTAATCTAGAACAACTTAA+AGG - chr3.2:79142839-79142858 None:intergenic 25.0%
!! TTCTATTTCTCCTCATAATA+GGG + chr3.2:79142873-79142892 MS.gene06499:CDS 25.0%
!! TTTTACTATACATGATAGCT+TGG + chr3.2:79146192-79146211 MS.gene06499:intron 25.0%
!!! CATAAAAAGAAAGTGTTAGT+AGG + chr3.2:79144725-79144744 MS.gene06499:intron 25.0%
!!! TATATTTTTTCGGTGTTGTT+CGG + chr3.2:79143126-79143145 MS.gene06499:intron 25.0%
AAAAAACTTAATACCCATGG+TGG - chr3.2:79144084-79144103 None:intergenic 30.0%
AAAAACTTAATACCCATGGT+GGG - chr3.2:79144083-79144102 None:intergenic 30.0%
AAAACGTTTAAGTGAACTCT+GGG + chr3.2:79143378-79143397 MS.gene06499:intron 30.0%
AATTTCATCTCGTATTTAGG+TGG - chr3.2:79145801-79145820 None:intergenic 30.0%
AATTTGATGTGTCATCTAGT+AGG - chr3.2:79145913-79145932 None:intergenic 30.0%
ACCAACATTCTTAAACATTG+AGG - chr3.2:79146325-79146344 None:intergenic 30.0%
ACCTCAATGTTTAAGAATGT+TGG + chr3.2:79146321-79146340 MS.gene06499:CDS 30.0%
ACTTAACATTGTTGCATTCA+TGG - chr3.2:79143875-79143894 None:intergenic 30.0%
AGTAGTAACACATACAAAGT+AGG - chr3.2:79145723-79145742 None:intergenic 30.0%
AGTTCAAAGAAGGTTTACAA+AGG + chr3.2:79143427-79143446 MS.gene06499:intron 30.0%
ATAGTATAGATGACGATTTG+TGG - chr3.2:79144110-79144129 None:intergenic 30.0%
CTTCTCAATTGAGAAATTAC+AGG - chr3.2:79146914-79146933 None:intergenic 30.0%
GGTGTCTTAATTAATTGACT+AGG + chr3.2:79146961-79146980 MS.gene06499:intron 30.0%
GTAGTAACACATACAAAGTA+GGG - chr3.2:79145722-79145741 None:intergenic 30.0%
GTTTACTCATTATGCTTCTT+AGG - chr3.2:79145843-79145862 None:intergenic 30.0%
TAGTATAGATGACGATTTGT+GGG - chr3.2:79144109-79144128 None:intergenic 30.0%
TCAAATCTTCTTGAAGACAA+TGG - chr3.2:79145771-79145790 None:intergenic 30.0%
TCGGAAAAAGAAAACGATAA+AGG - chr3.2:79146562-79146581 None:intergenic 30.0%
! CAAGTTTTACATTCCAGTTT+GGG - chr3.2:79146221-79146240 None:intergenic 30.0%
! GAGAGATTAATTTTTACCGT+CGG + chr3.2:79143939-79143958 MS.gene06499:intron 30.0%
! GATGACACATCAAATTTTAC+CGG + chr3.2:79145917-79145936 MS.gene06499:CDS 30.0%
! GTTCTATTTCTCCTCATAAT+AGG + chr3.2:79142872-79142891 MS.gene06499:CDS 30.0%
!! AGCAAAAGAAGTATCTATGT+TGG - chr3.2:79147046-79147065 None:intergenic 30.0%
!! TGTGTTAGCTAGATTTTGAT+TGG - chr3.2:79146126-79146145 None:intergenic 30.0%
!!! ATATTTTTTCGGTGTTGTTC+GGG + chr3.2:79143127-79143146 MS.gene06499:intron 30.0%
!!! CGGATCCAAATGTTTTAATA+GGG - chr3.2:79144875-79144894 None:intergenic 30.0%
!!! TCGGATCCAAATGTTTTAAT+AGG - chr3.2:79144876-79144895 None:intergenic 30.0%
AAGAAGTTGACTAATGCACA+AGG - chr3.2:79143517-79143536 None:intergenic 35.0%
ACAGGCAAAATTACACAACT+CGG - chr3.2:79146896-79146915 None:intergenic 35.0%
ACATTGAGGTGAGTACATTA+AGG - chr3.2:79146311-79146330 None:intergenic 35.0%
AGGAACCTTGTTCAAAACAA+GGG + chr3.2:79147168-79147187 MS.gene06499:CDS 35.0%
AGTACATTAAGGTTGGAAGT+TGG - chr3.2:79146300-79146319 None:intergenic 35.0%
AGTATAGATGACGATTTGTG+GGG - chr3.2:79144108-79144127 None:intergenic 35.0%
ATCCAATAACCCATCACTTA+TGG - chr3.2:79143840-79143859 None:intergenic 35.0%
CAAGCTTAACCATAAGTGAT+GGG + chr3.2:79143828-79143847 MS.gene06499:intron 35.0%
CCAAACTGGAATGTAAAACT+TGG + chr3.2:79146219-79146238 MS.gene06499:CDS 35.0%
GAAAACGTTTAAGTGAACTC+TGG + chr3.2:79143377-79143396 MS.gene06499:intron 35.0%
GAAATTAGTGACACATGTGA+AGG - chr3.2:79143057-79143076 None:intergenic 35.0%
GAGAACTTTGCCAAACATTA+TGG + chr3.2:79143903-79143922 MS.gene06499:intron 35.0%
GATAACATCTTTGATATGGG+TGG - chr3.2:79143463-79143482 None:intergenic 35.0%
GGGAAAAAACTTAATACCCA+TGG - chr3.2:79144087-79144106 None:intergenic 35.0%
TACAATTGCAACAGAGTATG+TGG - chr3.2:79146068-79146087 None:intergenic 35.0%
TACTATACATGATAGCTTGG+TGG + chr3.2:79146195-79146214 MS.gene06499:intron 35.0%
TAGCAGTTGTCAAAAGAAGT+GGG - chr3.2:79147144-79147163 None:intergenic 35.0%
TCAAGCTTAACCATAAGTGA+TGG + chr3.2:79143827-79143846 MS.gene06499:intron 35.0%
TGTTATCACATTGACGATAG+CGG + chr3.2:79143476-79143495 MS.gene06499:intron 35.0%
TTACATTGACAAAGCAATCG+TGG - chr3.2:79143033-79143052 None:intergenic 35.0%
! ATTTTTACCGTCGGATGTAA+AGG + chr3.2:79143948-79143967 MS.gene06499:intron 35.0%
! CCAAGTTTTACATTCCAGTT+TGG - chr3.2:79146222-79146241 None:intergenic 35.0%
! TCAGACCAACAACTTTTCAA+CGG + chr3.2:79147201-79147220 MS.gene06499:CDS 35.0%
! TTTTAGCGCAGTAAAAAGAG+CGG + chr3.2:79144524-79144543 MS.gene06499:intron 35.0%
!! AACCATAAGTGATGGGTTAT+TGG + chr3.2:79143835-79143854 MS.gene06499:intron 35.0%
!! TAAAGGAAGAAAGCGTTATC+TGG + chr3.2:79146797-79146816 MS.gene06499:intron 35.0%
AAGCAAGGTGCACAACATTT+AGG + chr3.2:79147001-79147020 MS.gene06499:CDS 40.0%
AGCAAGGTGCACAACATTTA+GGG + chr3.2:79147002-79147021 MS.gene06499:CDS 40.0%
AGCAGTTGTCAAAAGAAGTG+GGG - chr3.2:79147143-79147162 None:intergenic 40.0%
AGGATCAGGGGACAATAATT+TGG + chr3.2:79147098-79147117 MS.gene06499:CDS 40.0%
AGTAAAAAGAGCGGAAAGAC+GGG + chr3.2:79144533-79144552 MS.gene06499:intron 40.0%
ATAGCCACTCACTATTGAGT+TGG - chr3.2:79147235-79147254 None:intergenic 40.0%
ATTAATCTCTCAAACCGGGT+AGG - chr3.2:79143930-79143949 None:intergenic 40.0%
ATTCGCTAGTAGGGATAAAG+TGG + chr3.2:79144557-79144576 MS.gene06499:intron 40.0%
CAGGAACCTTGTTCAAAACA+AGG + chr3.2:79147167-79147186 MS.gene06499:CDS 40.0%
CAGTAAAAAGAGCGGAAAGA+CGG + chr3.2:79144532-79144551 MS.gene06499:intron 40.0%
CATTGTTGCATTCATGGAGT+TGG - chr3.2:79143869-79143888 None:intergenic 40.0%
GTAGCAGTTGTCAAAAGAAG+TGG - chr3.2:79147145-79147164 None:intergenic 40.0%
GTATAGATGACGATTTGTGG+GGG - chr3.2:79144107-79144126 None:intergenic 40.0%
GTTTGTAGAGAGTTGTGCAT+TGG - chr3.2:79142903-79142922 None:intergenic 40.0%
TCCTGGACATATGTTCTCTA+CGG - chr3.2:79146011-79146030 None:intergenic 40.0%
TCTAATTGCCCAAAGACATC+AGG + chr3.2:79147078-79147097 MS.gene06499:CDS 40.0%
TGAGGTGAGTACATTAAGGT+TGG - chr3.2:79146307-79146326 None:intergenic 40.0%
TGGACAATGGAAGAGAGTTT+GGG - chr3.2:79142944-79142963 None:intergenic 40.0%
TTGGACAATGGAAGAGAGTT+TGG - chr3.2:79142945-79142964 None:intergenic 40.0%
! CTTTTGACAACTGCTACTAC+AGG + chr3.2:79147148-79147167 MS.gene06499:CDS 40.0%
! GCAAGCTTCAAGTTCAAAGA+AGG + chr3.2:79143417-79143436 MS.gene06499:intron 40.0%
!! ACTCAAAAGCACTTGGATGA+TGG + chr3.2:79143792-79143811 MS.gene06499:intron 40.0%
!! ACTTGTCACTCAAAAGCACT+TGG + chr3.2:79143785-79143804 MS.gene06499:intron 40.0%
!! AGAGAGTTTGGGACAAGTTT+TGG - chr3.2:79142933-79142952 None:intergenic 40.0%
!!! GAAGACCCTTGTTTTGAACA+AGG - chr3.2:79147176-79147195 None:intergenic 40.0%
AACAGAGTATGTGGCAGCAA+TGG - chr3.2:79146059-79146078 None:intergenic 45.0%
AAGCCACTCACTGGATCAAA+TGG + chr3.2:79147318-79147337 MS.gene06499:CDS 45.0%
AAGGACTTAGTCGCATTGTC+AGG + chr3.2:79146354-79146373 MS.gene06499:CDS 45.0%
AGCAATCGTGGAAGAACAAG+CGG - chr3.2:79143021-79143040 None:intergenic 45.0%
AGTGCAATCCGCTATATCGA+AGG + chr3.2:79142970-79142989 MS.gene06499:CDS 45.0%
CATTGGCACTCCCTATTATG+AGG - chr3.2:79142886-79142905 None:intergenic 45.0%
CCAAACATTATGGTCCTACC+CGG + chr3.2:79143913-79143932 MS.gene06499:intron 45.0%
CCTCGAACAGAGTTCCTATT+CGG - chr3.2:79145959-79145978 None:intergenic 45.0%
CGAATGTCCTTTACATCCGA+CGG - chr3.2:79143958-79143977 None:intergenic 45.0%
CTCACACAATTGGACAAGCA+AGG + chr3.2:79146986-79147005 MS.gene06499:CDS 45.0%
CTCGAACAGAGTTCCTATTC+GGG - chr3.2:79145958-79145977 None:intergenic 45.0%
GCAAGGATAAAACCCACCAT+GGG + chr3.2:79144068-79144087 MS.gene06499:intron 45.0%
GCAGTTGTCAAAAGAAGTGG+GGG - chr3.2:79147142-79147161 None:intergenic 45.0%
GCCACTGCTATGATCAAGAT+GGG + chr3.2:79147288-79147307 MS.gene06499:CDS 45.0%
GGAGATATTAAGCCACTCAC+TGG + chr3.2:79147309-79147328 MS.gene06499:CDS 45.0%
TCAGCACATGATACAACTCC+TGG - chr3.2:79146028-79146047 None:intergenic 45.0%
TCCACCAACTCAATAGTGAG+TGG + chr3.2:79147228-79147247 MS.gene06499:CDS 45.0%
TCCCATCTTGATCATAGCAG+TGG - chr3.2:79147292-79147311 None:intergenic 45.0%
TCTCCATTTGATCCAGTGAG+TGG - chr3.2:79147324-79147343 None:intergenic 45.0%
TGACAATGCGACTAAGTCCT+TGG - chr3.2:79146355-79146374 None:intergenic 45.0%
TGACTAGGTGCTCACACAAT+TGG + chr3.2:79146976-79146995 MS.gene06499:intron 45.0%
TGCAAGGATAAAACCCACCA+TGG + chr3.2:79144067-79144086 MS.gene06499:intron 45.0%
TGCCACTGCTATGATCAAGA+TGG + chr3.2:79147287-79147306 MS.gene06499:CDS 45.0%
TGTCAAAAGAAGTGGGGGTA+TGG - chr3.2:79147137-79147156 None:intergenic 45.0%
! ACCAACAACTTTTCAACGGC+GGG + chr3.2:79147205-79147224 MS.gene06499:CDS 45.0%
! ACTACCCCTTTCAGCACTTT+TGG + chr3.2:79144141-79144160 MS.gene06499:intron 45.0%
! ATATCGAAGGAGGCACGAAT+GGG + chr3.2:79142983-79143002 MS.gene06499:CDS 45.0%
! CTACCCCTTTCAGCACTTTT+GGG + chr3.2:79144142-79144161 MS.gene06499:intron 45.0%
! GACCAACAACTTTTCAACGG+CGG + chr3.2:79147204-79147223 MS.gene06499:CDS 45.0%
! TATATCGAAGGAGGCACGAA+TGG + chr3.2:79142982-79143001 MS.gene06499:CDS 45.0%
! TGCAATTATAGGGGTGCGAT+GGG + chr3.2:79145882-79145901 MS.gene06499:intron 45.0%
! TTGCAATTATAGGGGTGCGA+TGG + chr3.2:79145881-79145900 MS.gene06499:intron 45.0%
!! CAACCCAAAAGTGCTGAAAG+GGG - chr3.2:79144148-79144167 None:intergenic 45.0%
!! CCAACCCAAAAGTGCTGAAA+GGG - chr3.2:79144149-79144168 None:intergenic 45.0%
!! GAATGTTGGTCTTTCCACCA+AGG + chr3.2:79146335-79146354 MS.gene06499:CDS 45.0%
!! TAAGGTTGGAAGTTGGTGCT+GGG - chr3.2:79146293-79146312 None:intergenic 45.0%
!! TCCAACCCAAAAGTGCTGAA+AGG - chr3.2:79144150-79144169 None:intergenic 45.0%
!! TCGATATAGCGGATTGCACT+TGG - chr3.2:79142970-79142989 None:intergenic 45.0%
!! TTAAGGTTGGAAGTTGGTGC+TGG - chr3.2:79146294-79146313 None:intergenic 45.0%
!! AAAATTAAACATAAATAAAA+TGG + chr3.2:79145385-79145404 MS.gene06499:intron 5.0%
!! AAATTAAACATAAATAAAAT+GGG + chr3.2:79145386-79145405 MS.gene06499:intron 5.0%
!! TACTTAAATATAATTTAAAT+CGG + chr3.2:79143594-79143613 MS.gene06499:intron 5.0%
!! TTATTTGTATTAAAAATTAA+GGG - chr3.2:79144191-79144210 None:intergenic 5.0%
!!! AAAAGTATAAATTAAAAATA+TGG + chr3.2:79145104-79145123 MS.gene06499:intron 5.0%
AAAGACGGGCATTCGCTAGT+AGG + chr3.2:79144547-79144566 MS.gene06499:intron 50.0%
AAGACGGGCATTCGCTAGTA+GGG + chr3.2:79144548-79144567 MS.gene06499:intron 50.0%
AATCGTGGAAGAACAAGCGG+AGG - chr3.2:79143018-79143037 None:intergenic 50.0%
ACCCGCCGTTGAAAAGTTGT+TGG - chr3.2:79147209-79147228 None:intergenic 50.0%
ACTTGAAGCTTGCCCTGATC+TGG - chr3.2:79143410-79143429 None:intergenic 50.0%
AGAAGAACGCACTCCCGAAT+AGG + chr3.2:79145942-79145961 MS.gene06499:CDS 50.0%
AGCAGATTGACTAGCAGTCG+TGG - chr3.2:79146256-79146275 None:intergenic 50.0%
AGTATGTGGCAGCAATGGCT+AGG - chr3.2:79146054-79146073 None:intergenic 50.0%
CAATGCGACTAAGTCCTTGG+TGG - chr3.2:79146352-79146371 None:intergenic 50.0%
CCCAAAGACATCAGGATCAG+GGG + chr3.2:79147086-79147105 MS.gene06499:CDS 50.0%
CCCCTGATCCTGATGTCTTT+GGG - chr3.2:79147089-79147108 None:intergenic 50.0%
CCGAATAGGAACTCTGTTCG+AGG + chr3.2:79145956-79145975 MS.gene06499:CDS 50.0%
CCGGGTAGGACCATAATGTT+TGG - chr3.2:79143916-79143935 None:intergenic 50.0%
GCAATCCGCTATATCGAAGG+AGG + chr3.2:79142973-79142992 MS.gene06499:CDS 50.0%
GCCCAAAGACATCAGGATCA+GGG + chr3.2:79147085-79147104 MS.gene06499:CDS 50.0%
GCCGTAGAGAACATATGTCC+AGG + chr3.2:79146007-79146026 MS.gene06499:CDS 50.0%
TCCCCTGATCCTGATGTCTT+TGG - chr3.2:79147090-79147109 None:intergenic 50.0%
TCGTGCCTCCTTCGATATAG+CGG - chr3.2:79142981-79143000 None:intergenic 50.0%
TGCCCAAAGACATCAGGATC+AGG + chr3.2:79147084-79147103 MS.gene06499:CDS 50.0%
! TTGCACTTGGCGTTGGACAA+TGG - chr3.2:79142957-79142976 None:intergenic 50.0%
!! CCCTTTCAGCACTTTTGGGT+TGG + chr3.2:79144146-79144165 MS.gene06499:intron 50.0%
!! GCCACTCACTATTGAGTTGG+TGG - chr3.2:79147232-79147251 None:intergenic 50.0%
TCTGGGTGCTCACCAGATCA+GGG + chr3.2:79143395-79143414 MS.gene06499:intron 55.0%
! GATAGCTTGGTGGCCCAAAC+TGG + chr3.2:79146205-79146224 MS.gene06499:intron 55.0%
! GTGGGGGTATGGAGATCAAG+AGG - chr3.2:79147126-79147145 None:intergenic 55.0%
!! GTTGGAAGTTGGTGCTGGGA+TGG - chr3.2:79146289-79146308 None:intergenic 55.0%
!! TAGCGGATTGCACTTGGCGT+TGG - chr3.2:79142964-79142983 None:intergenic 55.0%
CTCTGGGTGCTCACCAGATC+AGG + chr3.2:79143394-79143413 MS.gene06499:intron 60.0%
! CGGGAGTGCGTTCTTCTCTC+CGG - chr3.2:79145939-79145958 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 79142830 79147374 79142830 ID=MS.gene06499
chr3.2 mRNA 79142830 79147374 79142830 ID=MS.gene06499.t1;Parent=MS.gene06499
chr3.2 exon 79142830 79143048 79142830 ID=MS.gene06499.t1.exon1;Parent=MS.gene06499.t1
chr3.2 CDS 79142830 79143048 79142830 ID=cds.MS.gene06499.t1;Parent=MS.gene06499.t1
chr3.2 exon 79145893 79146084 79145893 ID=MS.gene06499.t1.exon2;Parent=MS.gene06499.t1
chr3.2 CDS 79145893 79146084 79145893 ID=cds.MS.gene06499.t1;Parent=MS.gene06499.t1
chr3.2 exon 79146210 79146375 79146210 ID=MS.gene06499.t1.exon3;Parent=MS.gene06499.t1
chr3.2 CDS 79146210 79146375 79146210 ID=cds.MS.gene06499.t1;Parent=MS.gene06499.t1
chr3.2 exon 79146983 79147374 79146983 ID=MS.gene06499.t1.exon4;Parent=MS.gene06499.t1
chr3.2 CDS 79146983 79147374 79146983 ID=cds.MS.gene06499.t1;Parent=MS.gene06499.t1
Gene Sequence

>MS.gene06499

ATGGCTCCTTTAAGTTGTTCTAGATTAACAATGTTCAGTTTGGTTCTATTTCTCCTCATAATAGGGAGTGCCAATGCACAACTCTCTACAAACTTTTACTCCAAAACTTGTCCCAAACTCTCTTCCATTGTCCAACGCCAAGTGCAATCCGCTATATCGAAGGAGGCACGAATGGGTGCTTCTATCCTCCGCTTGTTCTTCCACGATTGCTTTGTCAATGTAAGCCTTCACATGTGTCACTAATTTCATTTATAACACCATATATTTTTTGAACACAATTTCTTTATTGATTGTAGTATATTTTTTCGGTGTTGTTCGGGTTTTGTATATAATATTACGTTTTGTATTATTTGTATATAATATTCATTTGAAATTCATATATCTAAGAAATAAAAAAAAAATTACTCATATTATAACCTAAAATTTATTAAATGAACTATTAATATATACATAAAATGTAAAATATAAAATCCTAGAATAAGTTGAAATAATAAAAAATATGTGTTTAGAATGAATAGAATTGACACACGTAAAAAGAAATTTGTTAGAAAACGTTTAAGTGAACTCTGGGTGCTCACCAGATCAGGGCAAGCTTCAAGTTCAAAGAAGGTTTACAAAGGTAATTAAAGACCACCCATATCAAAGATGTTATCACATTGACGATAGCGGTAATTAAACTCACAACCTTGTGCATTAGTCAACTTCTTATTAATTCAGTCAACCTTTATTGACAATTGTCTATTAAATTTGATAAAAGCTACGCTTACTTAAATATAATTTAAATCGGAGTTTAATGAAGATAAAAATTGAGAAACAAATAAAAAATTAAAATTAACATGCCGGATTATATTTAAAAAGAACAAAAAATTTGTATATATATAATCAGTTTTAATAATAATAATGACGACGACGACAACAACAACAATAATAATAATAACAAAAATAATATTAATAGACTTGTCACTCAAAAGCACTTGGATGATGGTAAGACATCTCATCAAGCTTAACCATAAGTGATGGGTTATTGGATTTGATTCCAACTCCATGAATGCAACAATGTTAAGTCTCTTGAAGAGAACTTTGCCAAACATTATGGTCCTACCCGGTTTGAGAGATTAATTTTTACCGTCGGATGTAAAGGACATTCGATTTAGACAAAAAATAAAATAGACCTTTAAAAAAAAAATAGCTAGTAATAGTAAGAGTTATCAGGGATGCCAAAAAAAAAAAAATGATATGCAAGGATAAAACCCACCATGGGTATTAAGTTTTTTCCCCCACAAATCGTCATCTATACTATATATAAAGAAAACTACCCCTTTCAGCACTTTTGGGTTGGAATTTTCATTCCAAAAATACCCTTAATTTTTAATACAAATAACACATGTAACAAATAGATAAGAATAAATTTAAATATTAAAAAAAATGTAACAAACACGATATGACTGTTCTTTTTTTTCTTTATCATTTAAAAAGTGTAACGAACTAAAAGAGTATATTTATACTTAATTTTTTATTATCCCAATTATACCCTTAAACATTTTTTTCCATAATAAAAATTGTTGTTGGTGTTATTGAAATAGATAATCATGTTTAATTTGATTTGTTATAACTAGAAAGCAAAAAACATTTATATTTTTAGTTTTAATCAAAATCAAAATTTCATAAAAAAAACATAGTTCATAATTTACAAATTTTAGCGCAGTAAAAAGAGCGGAAAGACGGGCATTCGCTAGTAGGGATAAAGTGGATAACTTAACTACTGCATGTACATAAAATACACTTATATTTTAAGTACTCTCAACTAATTGATACAAAAGTTGAAGTAATGATTTTTGTACATAAAGTTTATAATGATAATTTAGATATCTAGTATGTTGAGCTATTTTATTCTACATAAAAAGAAAGTGTTAGTAGGACATGTGCATAAAATTAAATACAAAATTTAATAATATTTTAAAAAATATTAAGTGAAATTATTTTGTAGTTAAAATTAGAACCTAATTAAGATGTTCAAGATAAAGAAGTGATAATAAATCAAACCCTATTAAAACATTTGGATCCGAAGTTAATATCTTGAAATGTATATGTGACTTAAAATTGGTCTAGTTTGTCGAGATATTTATGTTAGAAAAAAATATTTACTTTTGTAAATGTAAACAATTATGAAAATTAACATGGAAAAGGCCACATGCATAAAAAATAAAATAAAGTAATTTTTTTAATTTAAATTATGATTAAATAATTAATTTATTGAAAAATAAATGTTAAAATAAAAGTATAAATTAAAAATATGGTTAAATACAATGAAAATTTATGTGTATTTTATTTCGATGTCTATACCACTTAATTTTTTTTGAAAGAAATGCTACTTAATGAAATGGTTAAATCTAAATAAAAATATGCTACTTAAAGTTTAAGAAACAATTAAAACGTTAAATGAATATATAGCGGATAATATCAAATTAATATATGTTATTTAAAAAATCAAATTTATATATGTATTTTGTTAATATATTTATGTTAGATAAAAAATTAATTTAAAAAAATAGAAAAAAATTAAACATAAATAAAATGGGAGTGATATGCGTACATAAAAAATATATGATATTATTTAAATTTAACTTATGATTAAATAATTAAATTTATAAAAAAACATGTTAAAAAAATTAGAATATTCAAATATAATGAGTAATTTATTGAGATATTTATGCTATATAAAATATTATAAATTAATTAAAATCATAAATAAAATATTTAGTGGATAAGATTAGAGCAATATATATAGTTTGTTGAGATATTTGTGTCAAATAAAATATTAAGTTAAAAAAATAGAAAAAATTAATAAAAATATTGAGAATAATGGTGAAAGTGAATTTGACATAAAAACCCTACTTTGTATGTGTTACTACTGTTGATTTAAAACGGCTTCATTTTACCATTGTCTTCAAGAAGATTTGAATTTTATCCACCTAAATACGAGATGAAATTCTTGTTACTTTAGTTGATGCCTAAGAAGCATAATGAGTAAACTATACTAATATATATTACTTGCAATTATAGGGGTGCGATGGGTCAATCCTACTAGATGACACATCAAATTTTACCGGAGAGAAGAACGCACTCCCGAATAGGAACTCTGTTCGAGGATTTGATGTCATTGACAACATAAAGACAGCCGTAGAGAACATATGTCCAGGAGTTGTATCATGTGCTGATATCCTAGCCATTGCTGCCACATACTCTGTTGCAATTGTAAGTATATTGTAGTCATATATCAATGAATTTATTCACCAATCAAAATCTAGCTAACACACTAACCATGAAATGTAAATTGATTAATATTTTAATTGTTGTCTTGCTTTTACTATACATGATAGCTTGGTGGCCCAAACTGGAATGTAAAACTTGGAAGAAGAGATGCCACGACTGCTAGTCAATCTGCTGCGAACACTGCCATCCCAGCACCAACTTCCAACCTTAATGTACTCACCTCAATGTTTAAGAATGTTGGTCTTTCCACCAAGGACTTAGTCGCATTGTCAGGTTCAATTGCATTGCTTTAGACATATACATATAGTTTTTTTTTTTACTTATATTTAATTCAAATATATAATTTAAGTAAAATTACACAATTCGTTCCTTAACTTAACTTCAAACAATACTTTCGTTCTTTATCTTATTTTTTCCGATTTCATCCTTTATGTTATAATTATGTAACATTTTTGTCCTTTATCGTTTTCTTTTTCCGATTTAATCTTTTATGTTATAAAATGTAAACAATGTTATCCTTTTTATGGGATTTTTTTTAATGAAATTTGGGTTTCTATATTAATATGATGAAGATTTGGATGCGTTTATGAGTTTGATGAATTCTTTATAAGTTCTTTTTATATTTTTTTCGAAAAAAATGATAACAATGTTGATATTTTATAACATAAATGACTAAATCGAAAAAAGAAAAAGATAAAGGAAGAAAGCGTTATCTGGTTATAACATAAAAGATGAAATCAATAAAAAATAAGATAAATGACGAAAGTGTTGCATGAAATTAAGTTAATGGCCGAGTTGTGTAATTTTGCCTGTAATTTCTCAATTGAGAAGAACTAATAATTGTCAAATAACTAATTTGGTGTCTTAATTAATTGACTAGGTGCTCACACAATTGGACAAGCAAGGTGCACAACATTTAGGGCTCGAATCTACAATGAGACCAACATAGATACTTCTTTTGCTAGCACAAGACAATCTAATTGCCCAAAGACATCAGGATCAGGGGACAATAATTTGGCACCTCTTGATCTCCATACCCCCACTTCTTTTGACAACTGCTACTACAGGAACCTTGTTCAAAACAAGGGTCTTCTTCATTCAGACCAACAACTTTTCAACGGCGGGTCCACCAACTCAATAGTGAGTGGCTATTTTAATAATCAAAACTCTTTTTTCTCTGATTTTGCCACTGCTATGATCAAGATGGGAGATATTAAGCCACTCACTGGATCAAATGGAGAGATTAGAAAGAACTGCAGAAAACCTAACTAA
Protein sequence

>MS.gene06499.t1

MAPLSCSRLTMFSLVLFLLIIGSANAQLSTNFYSKTCPKLSSIVQRQVQSAISKEARMGASILRLFFHDCFVNGCDGSILLDDTSNFTGEKNALPNRNSVRGFDVIDNIKTAVENICPGVVSCADILAIAATYSVAILGGPNWNVKLGRRDATTASQSAANTAIPAPTSNLNVLTSMFKNVGLSTKDLVALSGAHTIGQARCTTFRARIYNETNIDTSFASTRQSNCPKTSGSGDNNLAPLDLHTPTSFDNCYYRNLVQNKGLLHSDQQLFNGGSTNSIVSGYFNNQNSFFSDFATAMIKMGDIKPLTGSNGEIRKNCRKPN