AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017207

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017207.t1 MTR_5g074970 98.466 326 5 0 1 326 1 326 0.0 660
MS.gene017207.t1 MTR_3g466200 72.013 318 88 1 9 326 4 320 7.15e-170 474
MS.gene017207.t1 MTR_3g094650 65.538 325 105 4 3 326 4 322 2.62e-150 425
MS.gene017207.t1 MTR_5g083860 64.127 315 111 2 12 326 13 325 1.73e-145 413
MS.gene017207.t1 MTR_3g094670 64.952 311 106 3 17 326 14 322 4.32e-137 392
MS.gene017207.t1 MTR_4g029170 61.610 323 120 2 5 326 2 321 2.09e-135 387
MS.gene017207.t1 MTR_3g094630 64.630 311 107 3 17 326 14 322 3.60e-133 382
MS.gene017207.t1 MTR_4g029200 59.667 300 117 2 27 326 43 338 6.86e-130 374
MS.gene017207.t1 MTR_3g072190 60.312 320 121 4 9 326 3 318 5.35e-129 371
MS.gene017207.t1 MTR_4g029190 59.091 308 119 4 22 326 37 340 2.70e-127 367
MS.gene017207.t1 MTR_7g072510 60.535 299 114 2 28 326 18 312 4.72e-127 366
MS.gene017207.t1 MTR_4g029180 63.390 295 104 2 33 326 30 321 5.83e-127 366
MS.gene017207.t1 MTR_2g084080 58.013 312 126 3 16 326 10 317 6.08e-125 360
MS.gene017207.t1 MTR_4g083710 57.143 315 130 4 15 326 12 324 1.39e-124 360
MS.gene017207.t1 MTR_7g072480 59.677 310 121 2 17 326 11 316 1.70e-123 357
MS.gene017207.t1 MTR_5g074740 56.832 322 129 7 10 326 5 321 1.55e-122 355
MS.gene017207.t1 MTR_5g074860 57.576 330 129 7 1 325 1 324 2.60e-122 354
MS.gene017207.t1 MTR_3g466180 58.769 325 124 4 7 326 4 323 3.19e-122 354
MS.gene017207.t1 MTR_2g084110 58.194 299 121 2 28 326 23 317 1.20e-121 352
MS.gene017207.t1 MTR_5g074760 56.211 322 131 7 10 326 5 321 1.51e-121 352
MS.gene017207.t1 MTR_5g074710 55.828 326 132 8 6 326 3 321 1.70e-120 350
MS.gene017207.t1 MTR_4g074995 54.348 322 128 5 7 326 4 308 2.91e-120 348
MS.gene017207.t1 MTR_2g084090 56.230 313 133 3 15 326 9 318 1.69e-119 347
MS.gene017207.t1 MTR_3g467600 54.688 320 136 5 12 326 9 324 4.12e-118 343
MS.gene017207.t1 MTR_2g084020 55.937 320 135 4 9 326 3 318 9.58e-118 342
MS.gene017207.t1 MTR_1g115900 53.495 329 142 5 1 326 1 321 5.55e-117 341
MS.gene017207.t1 MTR_2g084010 57.000 300 124 3 28 326 23 318 1.53e-115 337
MS.gene017207.t1 MTR_7g026990 54.545 330 138 6 1 326 1 322 1.95e-115 337
MS.gene017207.t1 MTR_2g084000 54.259 317 138 4 13 326 7 319 1.25e-112 329
MS.gene017207.t1 MTR_4g074990 52.548 314 130 4 15 326 9 305 2.54e-111 325
MS.gene017207.t1 MTR_3g072190 62.598 254 91 2 73 326 2 251 1.54e-106 311
MS.gene017207.t1 MTR_5g021060 52.787 305 132 4 30 326 30 330 2.32e-104 309
MS.gene017207.t1 MTR_5g017850 49.844 321 150 3 13 326 10 326 3.99e-104 308
MS.gene017207.t1 MTR_5g017860 49.533 321 151 3 13 326 10 326 8.93e-104 307
MS.gene017207.t1 MTR_1g054205 48.802 334 152 7 3 326 2 326 1.18e-102 304
MS.gene017207.t1 MTR_8g076820 51.792 307 136 4 28 326 28 330 1.85e-101 301
MS.gene017207.t1 MTR_4g125940 50.920 326 142 6 13 326 10 329 4.53e-101 300
MS.gene017207.t1 MTR_7g093370 47.988 323 152 6 15 326 54 371 2.23e-100 300
MS.gene017207.t1 MTR_1g022970 52.288 306 133 4 30 326 46 347 2.83e-100 299
MS.gene017207.t1 MTR_2g029730 47.962 319 153 4 17 326 12 326 4.25e-99 296
MS.gene017207.t1 MTR_2g040000 50.610 328 141 6 14 326 10 331 1.04e-98 295
MS.gene017207.t1 MTR_2g029560 47.095 327 160 5 9 326 3 325 1.97e-98 294
MS.gene017207.t1 MTR_5g049280 47.041 338 150 8 12 326 6 337 1.76e-97 291
MS.gene017207.t1 MTR_4g074980 50.498 301 118 6 28 326 23 294 1.77e-97 290
MS.gene017207.t1 MTR_4g122640 51.475 305 138 4 28 326 36 336 2.01e-97 291
MS.gene017207.t1 MTR_2g028980 47.904 334 160 5 3 326 1 330 4.88e-97 291
MS.gene017207.t1 MTR_2g029750 48.494 332 158 4 4 326 3 330 5.16e-95 286
MS.gene017207.t1 MTR_2g029800 48.137 322 154 4 14 326 13 330 9.70e-95 285
MS.gene017207.t1 MTR_2g029815 46.914 324 158 5 13 326 11 330 9.82e-94 282
MS.gene017207.t1 MTR_2g029820 47.416 329 158 5 8 326 7 330 1.78e-93 282
MS.gene017207.t1 MTR_2g029830 49.026 308 144 4 28 326 26 329 3.80e-93 281
MS.gene017207.t1 MTR_2g029740 47.605 334 161 6 3 326 1 330 4.77e-92 278
MS.gene017207.t1 MTR_5g074860 49.091 330 118 8 1 325 1 285 1.00e-91 275
MS.gene017207.t1 MTR_4g125940 52.688 279 115 5 59 326 2 274 1.70e-91 274
MS.gene017207.t1 MTR_5g014100 49.518 311 138 5 30 326 26 331 3.31e-91 275
MS.gene017207.t1 MTR_2g029860 46.626 326 156 6 13 326 11 330 6.40e-91 275
MS.gene017207.t1 MTR_4g074980 55.365 233 100 3 28 258 23 253 7.97e-90 269
MS.gene017207.t1 MTR_4g031140 46.278 309 146 6 28 326 26 324 2.35e-88 268
MS.gene017207.t1 MTR_4g030890 46.302 311 153 5 23 326 93 396 3.17e-88 270
MS.gene017207.t1 MTR_2g029850 45.679 324 159 5 14 326 13 330 1.57e-87 266
MS.gene017207.t1 MTR_2g029910 44.720 322 166 4 14 326 14 332 1.82e-87 266
MS.gene017207.t1 MTR_1g077000 41.369 336 178 6 1 326 1 327 1.64e-83 255
MS.gene017207.t1 MTR_0155s0040 42.812 320 173 5 8 326 5 315 1.82e-82 252
MS.gene017207.t1 MTR_2g088770 44.062 320 164 7 16 326 12 325 6.56e-82 251
MS.gene017207.t1 MTR_4g046713 40.557 323 179 5 12 326 9 326 1.66e-80 248
MS.gene017207.t1 MTR_1g038680 44.554 303 155 5 34 326 33 332 8.88e-80 246
MS.gene017207.t1 MTR_1g086320 41.071 336 185 5 1 326 1 333 1.94e-78 243
MS.gene017207.t1 MTR_3g092990 41.358 324 180 3 10 326 6 326 2.41e-78 242
MS.gene017207.t1 MTR_7g029030 42.462 325 175 7 7 326 3 320 5.36e-77 239
MS.gene017207.t1 MTR_1g101830 40.123 324 177 7 11 326 8 322 1.72e-76 237
MS.gene017207.t1 MTR_2g008710 41.846 325 167 8 15 326 10 325 2.75e-76 237
MS.gene017207.t1 MTR_1g025980 42.271 317 165 7 15 322 7 314 6.09e-75 233
MS.gene017207.t1 MTR_1g086490 40.299 335 182 5 8 326 8 340 1.45e-74 233
MS.gene017207.t1 MTR_2g029830 48.846 260 120 4 76 326 6 261 2.67e-74 231
MS.gene017207.t1 MTR_6g027440 39.744 312 183 3 16 326 7 314 1.85e-73 229
MS.gene017207.t1 MTR_4g087965 42.363 347 170 8 1 322 1 342 3.54e-73 229
MS.gene017207.t1 MTR_6g043280 43.046 302 157 6 30 326 41 332 6.95e-73 228
MS.gene017207.t1 MTR_5g022870 40.379 317 172 5 17 326 10 316 1.95e-72 227
MS.gene017207.t1 MTR_4g114210 41.158 311 162 6 28 326 19 320 1.99e-72 227
MS.gene017207.t1 MTR_4g133800 40.667 300 158 6 35 326 46 333 1.89e-71 225
MS.gene017207.t1 MTR_2g437770 40.328 305 161 6 30 326 50 341 3.33e-71 224
MS.gene017207.t1 MTR_8g075100 40.453 309 157 7 30 326 26 319 1.81e-70 222
MS.gene017207.t1 MTR_7g107520 39.812 319 176 7 15 326 11 320 4.96e-69 218
MS.gene017207.t1 MTR_7g086820 39.274 303 170 4 26 323 16 309 1.06e-68 217
MS.gene017207.t1 MTR_3g092990 39.198 324 176 4 10 326 6 315 1.09e-66 212
MS.gene017207.t1 MTR_3g072210 59.474 190 71 5 139 326 53 238 1.14e-66 209
MS.gene017207.t1 MTR_5g074700 52.863 227 87 8 103 326 5 214 4.47e-66 207
MS.gene017207.t1 MTR_7g086870 38.255 298 175 4 30 326 22 311 1.16e-65 209
MS.gene017207.t1 MTR_1g090760 37.462 331 189 7 11 326 3 330 2.99e-65 209
MS.gene017207.t1 MTR_2g008160 40.566 318 164 7 23 326 17 323 4.54e-65 208
MS.gene017207.t1 MTR_8g062780 38.700 323 185 5 13 326 6 324 2.28e-64 206
MS.gene017207.t1 MTR_6g043460 37.651 332 189 7 1 322 1 324 2.90e-64 207
MS.gene017207.t1 MTR_5g016010 38.679 318 177 7 17 322 14 325 5.36e-64 206
MS.gene017207.t1 MTR_4g095450 42.295 305 161 9 26 322 23 320 1.16e-63 204
MS.gene017207.t1 MTR_0286s0010 37.963 324 183 9 15 326 17 334 1.39e-63 204
MS.gene017207.t1 MTR_6g008075 37.963 324 183 9 15 326 17 334 1.39e-63 204
MS.gene017207.t1 MTR_2g077990 39.039 333 165 9 28 324 74 404 3.44e-63 206
MS.gene017207.t1 MTR_2g067440 37.048 332 172 7 28 325 58 386 1.43e-62 204
MS.gene017207.t1 MTR_2g078610 38.138 333 168 8 28 324 74 404 1.46e-62 204
MS.gene017207.t1 MTR_4g127670 41.479 311 159 10 29 326 23 323 6.08e-62 200
MS.gene017207.t1 MTR_5g033470 36.482 307 185 4 29 326 72 377 1.22e-61 201
MS.gene017207.t1 MTR_6g043240 38.000 300 173 5 30 326 42 331 1.34e-60 197
MS.gene017207.t1 MTR_1g009750 37.160 331 190 7 9 326 3 328 2.25e-60 196
MS.gene017207.t1 MTR_2g008730 44.309 246 120 5 92 326 62 301 4.48e-59 192
MS.gene017207.t1 MTR_4g132110 34.891 321 203 4 10 326 10 328 4.67e-59 193
MS.gene017207.t1 MTR_3g105790 34.969 326 193 5 11 326 6 322 5.09e-59 192
MS.gene017207.t1 MTR_1g066380 36.093 302 189 3 27 326 24 323 6.55e-59 192
MS.gene017207.t1 MTR_1g066640 37.209 301 185 3 28 326 25 323 1.11e-58 192
MS.gene017207.t1 MTR_2g078280 38.629 321 159 9 28 312 74 392 1.55e-58 193
MS.gene017207.t1 MTR_2g099175 36.156 307 181 5 29 326 35 335 3.10e-58 191
MS.gene017207.t1 MTR_4g132490 35.197 304 187 4 29 326 28 327 5.49e-58 190
MS.gene017207.t1 MTR_1g066680 36.213 301 187 4 28 326 25 322 1.05e-57 189
MS.gene017207.t1 MTR_1g066710 36.213 301 188 3 28 326 25 323 3.39e-57 188
MS.gene017207.t1 MTR_4g132110 34.356 326 203 5 10 326 10 333 9.75e-57 187
MS.gene017207.t1 MTR_7g072490 44.672 244 77 2 76 319 2 187 3.50e-56 181
MS.gene017207.t1 MTR_0147s0010 34.062 320 172 6 30 325 77 381 2.97e-55 184
MS.gene017207.t1 MTR_2g008160 38.141 312 145 7 23 326 17 288 4.41e-54 179
MS.gene017207.t1 MTR_2g067450 36.570 309 177 8 28 325 9 309 1.24e-52 176
MS.gene017207.t1 MTR_1g009750 34.347 329 185 8 9 326 3 311 8.74e-50 168
MS.gene017207.t1 MTR_1g066380 36.471 255 158 3 74 326 3 255 2.46e-48 163
MS.gene017207.t1 MTR_2g008160 46.629 178 90 3 23 200 17 189 2.74e-46 156
MS.gene017207.t1 MTR_3g072260 63.063 111 41 0 29 139 25 135 5.32e-43 145
MS.gene017207.t1 MTR_3g105790 37.083 240 136 4 97 326 12 246 1.79e-40 142
MS.gene017207.t1 MTR_2g029880 39.175 194 95 4 142 326 9 188 1.65e-36 130
MS.gene017207.t1 MTR_2g077980 31.636 275 143 9 92 324 11 282 1.31e-27 109
MS.gene017207.t1 MTR_5g074770 53.191 94 41 2 234 325 16 108 6.65e-26 99.8
MS.gene017207.t1 MTR_5g058120 35.256 156 94 2 167 322 7 155 1.23e-24 100
MS.gene017207.t1 MTR_2g078560 31.839 223 116 7 135 322 95 316 2.81e-23 98.2
MS.gene017207.t1 MTR_6g048160 65.714 70 20 2 69 138 22 87 3.43e-23 92.0
MS.gene017207.t1 MTR_4g114220 56.098 82 26 2 56 137 29 100 3.85e-23 93.6
MS.gene017207.t1 MTR_3g462850 39.041 146 70 6 195 326 9 149 1.45e-21 89.7
MS.gene017207.t1 MTR_4g031040 35.882 170 68 5 91 260 3 131 2.85e-21 88.2
MS.gene017207.t1 MTR_7g086790 41.322 121 66 3 77 197 17 132 2.57e-20 87.4
MS.gene017207.t1 MTR_1g089005 41.525 118 62 2 30 141 15 131 3.30e-19 83.6
MS.gene017207.t1 MTR_1g098320 35.135 111 72 0 216 326 14 124 2.43e-17 77.8
MS.gene017207.t1 MTR_2g029930 35.870 92 34 2 28 108 17 94 4.75e-13 65.1
MS.gene017207.t1 MTR_3g086710 55.556 54 24 0 22 75 11 64 5.09e-13 64.3
MS.gene017207.t1 MTR_7g086810 30.508 118 56 1 26 143 2 93 3.02e-12 65.9
MS.gene017207.t1 MTR_0147s0040 35.616 73 47 0 252 324 9 81 1.34e-11 60.1
MS.gene017207.t1 MTR_4g012865 39.706 68 41 0 30 97 77 144 6.43e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017207.t1 AT5G58390 66.346 312 104 1 15 326 6 316 7.90e-144 409
MS.gene017207.t1 AT5G58400 63.057 314 115 1 13 326 13 325 9.03e-143 406
MS.gene017207.t1 AT5G05340 64.706 306 103 3 21 326 24 324 6.96e-142 404
MS.gene017207.t1 AT1G14550 56.151 317 131 4 15 326 8 321 1.11e-120 350
MS.gene017207.t1 AT1G14540 50.784 319 151 4 10 326 1 315 4.21e-107 315
MS.gene017207.t1 AT4G36430 51.084 323 143 6 13 326 14 330 1.40e-105 312
MS.gene017207.t1 AT5G06720 48.923 325 149 5 15 326 13 333 4.69e-105 311
MS.gene017207.t1 AT5G06730 46.313 339 164 6 1 326 1 334 1.67e-103 308
MS.gene017207.t1 AT3G50990 51.133 309 139 5 26 326 37 341 1.41e-102 305
MS.gene017207.t1 AT5G66390 50.000 310 143 4 25 326 28 333 2.45e-102 304
MS.gene017207.t1 AT1G44970 48.000 350 152 6 3 326 1 346 2.67e-102 304
MS.gene017207.t1 AT2G18150 48.204 334 149 5 13 326 7 336 3.33e-102 303
MS.gene017207.t1 AT2G18140 49.677 310 144 4 25 326 30 335 3.43e-97 291
MS.gene017207.t1 AT4G16270 52.145 303 127 6 34 326 54 348 5.61e-97 291
MS.gene017207.t1 AT5G19890 48.447 322 145 6 16 326 16 327 2.37e-94 283
MS.gene017207.t1 AT1G49570 50.163 307 141 4 25 322 43 346 2.99e-94 284
MS.gene017207.t1 AT4G08770 48.254 315 142 6 26 326 20 327 1.88e-93 281
MS.gene017207.t1 AT1G68850 44.311 334 160 7 15 326 6 335 7.08e-93 280
MS.gene017207.t1 AT5G19880 47.205 322 152 6 17 326 14 329 4.01e-92 278
MS.gene017207.t1 AT4G08780 47.302 315 145 6 26 326 20 327 5.22e-92 278
MS.gene017207.t1 AT2G38390 47.419 310 147 6 28 326 29 333 1.52e-91 277
MS.gene017207.t1 AT2G35380 46.041 341 163 6 1 326 1 335 4.16e-91 275
MS.gene017207.t1 AT2G38380 47.097 310 148 6 28 326 29 333 1.22e-89 272
MS.gene017207.t1 AT3G32980 46.178 314 150 6 26 326 27 334 2.26e-89 271
MS.gene017207.t1 AT3G49110 47.352 321 146 7 22 326 23 336 3.09e-89 271
MS.gene017207.t1 AT3G49120 46.178 314 150 6 26 326 28 335 1.52e-87 267
MS.gene017207.t1 AT3G01190 43.438 320 161 9 17 326 12 321 9.43e-83 253
MS.gene017207.t1 AT2G22420 44.408 304 155 4 30 326 23 319 9.26e-82 251
MS.gene017207.t1 AT1G71695 44.186 301 159 4 30 326 44 339 2.55e-80 248
MS.gene017207.t1 AT4G33420 42.547 322 173 6 8 326 13 325 2.97e-79 244
MS.gene017207.t1 AT1G05260 42.812 320 166 8 17 326 13 325 9.25e-79 243
MS.gene017207.t1 AT4G11290 41.159 328 174 8 13 326 4 326 9.77e-79 243
MS.gene017207.t1 AT4G33420 42.547 322 173 6 8 326 60 372 1.66e-78 244
MS.gene017207.t1 AT3G03670 40.062 322 179 5 13 326 6 321 2.32e-78 242
MS.gene017207.t1 AT5G51890 39.875 321 179 6 13 326 9 322 1.64e-77 240
MS.gene017207.t1 AT5G17820 39.252 321 174 5 13 326 7 313 8.58e-77 238
MS.gene017207.t1 AT5G64120 40.777 309 166 6 25 326 30 328 6.29e-76 236
MS.gene017207.t1 AT5G17820 40.187 321 171 6 13 326 60 366 1.38e-75 236
MS.gene017207.t1 AT5G15180 39.349 338 182 10 3 326 1 329 3.28e-74 232
MS.gene017207.t1 AT2G41480 40.000 335 176 9 8 326 3 328 6.10e-74 231
MS.gene017207.t1 AT3G21770 40.823 316 172 7 19 325 18 327 1.93e-73 230
MS.gene017207.t1 AT1G05240 40.594 303 163 6 30 322 26 321 8.50e-73 228
MS.gene017207.t1 AT1G05250 40.594 303 163 6 30 322 26 321 8.50e-73 228
MS.gene017207.t1 AT5G14130 39.937 318 177 5 17 326 19 330 1.94e-71 225
MS.gene017207.t1 AT1G30870 42.997 307 153 6 30 326 51 345 2.03e-71 225
MS.gene017207.t1 AT5G40150 39.739 307 169 6 28 326 30 328 4.16e-71 224
MS.gene017207.t1 AT5G42180 40.373 322 173 8 10 324 6 315 4.78e-71 223
MS.gene017207.t1 AT5G14130 39.937 318 177 5 17 326 60 371 5.92e-71 225
MS.gene017207.t1 AT4G26010 38.318 321 186 6 5 323 24 334 1.14e-70 223
MS.gene017207.t1 AT4G26010 39.677 310 175 6 15 323 8 306 1.23e-70 222
MS.gene017207.t1 AT5G47000 40.312 320 181 6 12 326 16 330 1.41e-69 220
MS.gene017207.t1 AT3G28200 38.889 306 172 6 28 326 19 316 1.91e-69 219
MS.gene017207.t1 AT5G39580 40.432 324 175 7 11 326 6 319 8.56e-69 218
MS.gene017207.t1 AT2G35380 48.163 245 116 3 92 326 4 247 1.90e-68 214
MS.gene017207.t1 AT4G17690 40.864 301 170 5 30 326 26 322 5.32e-67 213
MS.gene017207.t1 AT5G67400 40.836 311 166 7 24 322 21 325 6.06e-67 213
MS.gene017207.t1 AT4G33870 34.670 349 185 6 18 325 54 400 7.60e-67 215
MS.gene017207.t1 AT2G24800 39.228 311 167 5 28 326 29 329 8.84e-67 213
MS.gene017207.t1 AT1G34510 39.172 314 175 7 17 326 8 309 1.30e-66 212
MS.gene017207.t1 AT4G37530 42.222 315 158 9 23 322 20 325 3.32e-66 211
MS.gene017207.t1 AT5G64110 39.577 331 172 7 14 326 10 330 9.12e-66 210
MS.gene017207.t1 AT1G77100 38.344 326 186 9 8 326 2 319 1.04e-65 209
MS.gene017207.t1 AT5G64100 39.474 304 162 6 33 326 40 331 6.73e-64 205
MS.gene017207.t1 AT2G18980 38.720 328 179 8 11 326 6 323 7.57e-64 205
MS.gene017207.t1 AT4G37520 41.694 307 161 8 28 322 25 325 1.08e-63 205
MS.gene017207.t1 AT4G31760 36.792 318 189 5 15 326 15 326 1.62e-63 204
MS.gene017207.t1 AT3G49960 38.820 322 177 8 13 322 12 325 5.07e-63 203
MS.gene017207.t1 AT4G37520 40.523 306 163 7 28 322 25 322 2.66e-62 201
MS.gene017207.t1 AT4G30170 40.193 311 164 8 28 326 25 325 4.14e-61 198
MS.gene017207.t1 AT4G25980 36.624 314 177 7 26 326 22 326 1.32e-60 197
MS.gene017207.t1 AT1G24110 37.152 323 188 6 15 326 4 322 1.50e-60 196
MS.gene017207.t1 AT2G34060 39.739 307 169 7 29 323 41 343 1.74e-60 197
MS.gene017207.t1 AT4G21960 37.124 299 184 3 30 326 31 327 6.87e-57 187
MS.gene017207.t1 AT2G39040 38.835 309 175 7 29 326 45 350 1.27e-56 187
MS.gene017207.t1 AT5G22410 36.119 335 189 10 1 323 1 322 2.66e-56 186
MS.gene017207.t1 AT4G37530 43.284 268 128 9 23 275 20 278 1.06e-55 182
MS.gene017207.t1 AT2G37130 34.810 316 188 8 19 326 22 327 9.60e-55 182
MS.gene017207.t1 AT2G37130 35.430 302 180 7 33 326 2 296 3.00e-54 179
MS.gene017207.t1 AT5G24070 38.235 272 152 5 64 326 71 335 1.04e-53 179
MS.gene017207.t1 AT2G43480 34.615 312 186 6 26 326 31 335 7.89e-51 172
MS.gene017207.t1 AT3G17070 33.224 304 194 4 30 326 38 339 5.64e-49 167
MS.gene017207.t1 AT2G24800 41.379 203 109 4 28 229 29 222 6.07e-43 148
MS.gene017207.t1 AT5G39580 40.271 221 122 4 11 231 6 216 9.00e-43 148
MS.gene017207.t1 AT4G25980 41.040 173 97 3 26 198 67 234 1.41e-39 141
MS.gene017207.t1 AT3G17070 31.679 262 169 5 72 326 18 276 1.29e-35 130
MS.gene017207.t1 AT4G32320 30.038 263 109 7 64 308 117 322 4.25e-19 87.0
MS.gene017207.t1 AT1G77490 27.863 262 142 10 64 307 106 338 3.72e-13 70.1
MS.gene017207.t1 AT1G77490 27.863 262 142 10 64 307 106 338 4.06e-13 70.1
MS.gene017207.t1 AT3G42570 30.508 118 80 1 83 198 32 149 9.19e-13 65.5

Find 65 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTCCACCTTAGACTTTA+TGG 0.119850 5.3:-59680412 None:intergenic
TTATCCCGGTTTCCTTTAAT+TGG 0.200882 5.3:-59682700 None:intergenic
TGCAGCTTGGAGGGCCATTT+TGG 0.267352 5.3:+59681481 MS.gene017207:intron
CCAAGTTTAACCTTCCAAAA+TGG 0.296962 5.3:-59681495 None:intergenic
TGTAGTATAAGTTATCAAAA+TGG 0.316765 5.3:-59682479 None:intergenic
AAGGACATGGTGGCCTTATC+TGG 0.324620 5.3:+59681633 MS.gene017207:CDS
GGAAATAACAAGCCTCTTAC+CGG 0.340680 5.3:+59682642 MS.gene017207:CDS
CCCTTAGCAACCTTATCAAT+AGG 0.384569 5.3:+59681586 MS.gene017207:CDS
AGTCTTCTCTCCTTTATTAG+AGG 0.384702 5.3:-59680343 None:intergenic
AAGGTTGCTAAGGGTAGAAA+AGG 0.387632 5.3:-59681577 None:intergenic
TGCTACTGCAATGATTAAGA+TGG 0.388563 5.3:+59682620 MS.gene017207:CDS
TGGAGGATCTACTGATTCAT+TGG 0.391305 5.3:+59682554 MS.gene017207:CDS
AAGCCTCTTACCGGATCAAA+TGG 0.395569 5.3:+59682651 MS.gene017207:CDS
GAGCTTTAAACCTATTGATA+AGG 0.399870 5.3:-59681596 None:intergenic
TATTGATGCCATAAAGTCTA+AGG 0.403057 5.3:+59680404 MS.gene017207:CDS
TCCCCATTTGATCCGGTAAG+AGG 0.411637 5.3:-59682654 None:intergenic
CCGGATCAAATGGGGAGATT+AGG 0.414908 5.3:+59682661 MS.gene017207:CDS
GATGACACACCCTCTAATAA+AGG 0.415165 5.3:+59680333 MS.gene017207:CDS
ACCTATTGATAAGGTTGCTA+AGG 0.417064 5.3:-59681587 None:intergenic
AATGTAGGAGAGCCAATTAA+AGG 0.421930 5.3:+59682688 MS.gene017207:CDS
ACCTCTCAAAGAATCTTTGT+TGG 0.427591 5.3:-59680373 None:intergenic
CCTCTCAAAGAATCTTTGTT+GGG 0.433102 5.3:-59680372 None:intergenic
TTCTTAGGAGCTCACACAAT+TGG 0.437641 5.3:+59682306 MS.gene017207:intron
GGAAGGTTAAACTTGGAAGA+AGG 0.441433 5.3:+59681502 MS.gene017207:CDS
GTCTTCTCTCCTTTATTAGA+GGG 0.447683 5.3:-59680342 None:intergenic
GAAGGTTAAACTTGGAAGAA+GGG 0.455829 5.3:+59681503 MS.gene017207:CDS
GTAAATACGATCTCTATAAA+CGG 0.464729 5.3:-59682343 None:intergenic
TATAAGTTATCAAAATGGTT+TGG 0.466239 5.3:-59682474 None:intergenic
ATCAATAGGTTTAAAGCTCA+AGG 0.476560 5.3:+59681600 MS.gene017207:CDS
ACAATTCCTCTGCCTTGACT+TGG 0.477817 5.3:-59682394 None:intergenic
AGCCTCTTACCGGATCAAAT+GGG 0.481955 5.3:+59682652 MS.gene017207:CDS
ACTGTTTGCATCATTGAGGC+TGG 0.487052 5.3:-59681538 None:intergenic
CCTAATCTCCCCATTTGATC+CGG 0.491659 5.3:-59682661 None:intergenic
GCTACTGCAATGATTAAGAT+GGG 0.493974 5.3:+59682621 MS.gene017207:CDS
CCCAACAAAGATTCTTTGAG+AGG 0.507682 5.3:+59680372 MS.gene017207:CDS
TCAGCACATGAGACCACACC+GGG 0.520500 5.3:-59680441 None:intergenic
GGGAGATTAGGAAGCAATGT+AGG 0.528758 5.3:+59682673 MS.gene017207:CDS
CACCACTGTTTGCATCATTG+AGG 0.529112 5.3:-59681542 None:intergenic
AGCTCAAGGACTCTCTACTA+AGG 0.542515 5.3:+59681614 MS.gene017207:CDS
CCTATTGATAAGGTTGCTAA+GGG 0.554792 5.3:-59681586 None:intergenic
AACAGAATCACGAGCAGCAA+TGG 0.556484 5.3:-59680472 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.559330 5.3:-59682527 None:intergenic
ATAGTTTATTTGCCAAGTCA+AGG 0.563167 5.3:+59682382 MS.gene017207:CDS
AGGAATTGTCCAAGGAAAAG+TGG 0.565194 5.3:+59682408 MS.gene017207:CDS
AGGTTGCTAAGGGTAGAAAA+GGG 0.568432 5.3:-59681576 None:intergenic
CTAAGGGTAGAAAAGGGAGG+TGG 0.578099 5.3:-59681570 None:intergenic
TATTTGCCAAGTCAAGGCAG+AGG 0.591700 5.3:+59682388 MS.gene017207:CDS
CAAGGCAGAGGAATTGTCCA+AGG 0.617740 5.3:+59682400 MS.gene017207:CDS
GTCGCTAGAGAACCTCGCAT+GGG 0.619429 5.3:+59678664 MS.gene017207:CDS
TTGCTAAGGGTAGAAAAGGG+AGG 0.621073 5.3:-59681573 None:intergenic
TGTCGCTAGAGAACCTCGCA+TGG 0.621286 5.3:+59678663 MS.gene017207:CDS
TGATGCCATAAAGTCTAAGG+TGG 0.622773 5.3:+59680407 MS.gene017207:CDS
GCTAGAGAACCTCGCATGGG+AGG 0.623031 5.3:+59678667 MS.gene017207:CDS
CTCACACAATTGGAAAAGCA+AGG 0.632448 5.3:+59682316 MS.gene017207:CDS
GCCTCTTACCGGATCAAATG+GGG 0.633166 5.3:+59682653 MS.gene017207:CDS
AAGGTGGAGTCAGTATGCCC+CGG 0.647987 5.3:+59680423 MS.gene017207:CDS
AGGAGAGATCCTCCCATGCG+AGG 0.655274 5.3:-59678676 None:intergenic
GGAGTCAGTATGCCCCGGTG+TGG 0.661070 5.3:+59680428 MS.gene017207:CDS
ATCAGCACATGAGACCACAC+CGG 0.662563 5.3:-59680442 None:intergenic
AGGACTCTCTACTAAGGACA+TGG 0.666154 5.3:+59681620 MS.gene017207:CDS
AGTCATGAAAATGAAGACGA+AGG 0.684805 5.3:-59678696 None:intergenic
AGCCTCAATGATGCAAACAG+TGG 0.715380 5.3:+59681540 MS.gene017207:CDS
ACTCTCTACTAAGGACATGG+TGG 0.722310 5.3:+59681623 MS.gene017207:CDS
AGCGACAGCAGAGTGAACAA+CGG 0.726357 5.3:-59678647 None:intergenic
CAGCACATGAGACCACACCG+GGG 0.839989 5.3:-59680440 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATACATTTAATTAT+TGG + chr5.3:59681887-59681906 MS.gene017207:intron 10.0%
!! AATTTATTAGATAAAGATTA+AGG - chr5.3:59679790-59679809 None:intergenic 10.0%
!! ATTTATTAGATAAAGATTAA+GGG - chr5.3:59679789-59679808 None:intergenic 10.0%
!! TAATAATTGTATCATAATAA+TGG - chr5.3:59681710-59681729 None:intergenic 10.0%
!! TAATCTTTATCTAATAAATT+TGG + chr5.3:59679790-59679809 MS.gene017207:intron 10.0%
!!! AATAATTAAATGTATTTTCT+TGG - chr5.3:59681888-59681907 None:intergenic 10.0%
!!! AGATTGAATATATTATTTTT+TGG + chr5.3:59679277-59679296 MS.gene017207:intron 10.0%
!! AAAAATTACTAAATTTGTGT+CGG + chr5.3:59679613-59679632 MS.gene017207:intron 15.0%
!! AATTTAGTACATATTCAAAT+AGG - chr5.3:59679664-59679683 None:intergenic 15.0%
!! TTGGTTACTAAATAATAATA+TGG - chr5.3:59679205-59679224 None:intergenic 15.0%
!! TTTATTAGATAAAGATTAAG+GGG - chr5.3:59679788-59679807 None:intergenic 15.0%
!!! ACACAAATTTAGTAATTTTT+TGG - chr5.3:59679613-59679632 None:intergenic 15.0%
!!! TTTATTGAAGAGATTTTTAA+TGG + chr5.3:59680930-59680949 MS.gene017207:intron 15.0%
!! AATATAATGTTTACAAGTCT+TGG + chr5.3:59680743-59680762 MS.gene017207:intron 20.0%
!! AATATGTACTAAATTATGCA+TGG + chr5.3:59679669-59679688 MS.gene017207:intron 20.0%
!! AATATTGAGTGAATTGAATA+GGG + chr5.3:59679334-59679353 MS.gene017207:intron 20.0%
!! ATGTTTAAATTAGATACCAT+AGG - chr5.3:59681672-59681691 None:intergenic 20.0%
!! TATAAGTTATCAAAATGGTT+TGG - chr5.3:59682477-59682496 None:intergenic 20.0%
!! TGTAGTATAAGTTATCAAAA+TGG - chr5.3:59682482-59682501 None:intergenic 20.0%
!! TGTTGAAAATGAAATCTAAA+CGG - chr5.3:59681956-59681975 None:intergenic 20.0%
!! TTATTAGAAGAAAAGAAATG+AGG - chr5.3:59681401-59681420 None:intergenic 20.0%
!! TTGTTGTCAAACTAAAAAAA+TGG + chr5.3:59681344-59681363 MS.gene017207:intron 20.0%
!!! AAATCACTTTTTTCTAAACA+GGG + chr5.3:59680288-59680307 MS.gene017207:intron 20.0%
!!! ACTTTTAAATTCTTGAGATA+GGG + chr5.3:59679698-59679717 MS.gene017207:intron 20.0%
!!! ATTAAATGTATTTTCTTGGT+TGG - chr5.3:59681884-59681903 None:intergenic 20.0%
!!! GAATTGACATCTAATTATTT+TGG + chr5.3:59680642-59680661 MS.gene017207:intron 20.0%
!!! GTTACTATTCATTTTAACTT+TGG - chr5.3:59681932-59681951 None:intergenic 20.0%
!!! GTTCATTATTAAACTTTTTC+TGG - chr5.3:59680568-59680587 None:intergenic 20.0%
!!! TAAATCACTTTTTTCTAAAC+AGG + chr5.3:59680287-59680306 MS.gene017207:intron 20.0%
!!! TATTTTGGTGTTTGTAAAAT+GGG + chr5.3:59680657-59680676 MS.gene017207:intron 20.0%
!!! TTATTTTGGTGTTTGTAAAA+TGG + chr5.3:59680656-59680675 MS.gene017207:intron 20.0%
!!! TTCATGTTTTATCTTATAGA+TGG + chr5.3:59678556-59678575 MS.gene017207:CDS 20.0%
! AGTTATGTTTAGCAAAATCA+AGG - chr5.3:59681249-59681268 None:intergenic 25.0%
! ATAATTTCGAAGAATCTGTT+TGG + chr5.3:59681142-59681161 MS.gene017207:intron 25.0%
! ATTGTCTGATATGCTAAATA+TGG - chr5.3:59680147-59680166 None:intergenic 25.0%
! CATCATCATTAAATTAGTGA+CGG - chr5.3:59678949-59678968 None:intergenic 25.0%
! GAATATTGAGTGAATTGAAT+AGG + chr5.3:59679333-59679352 MS.gene017207:intron 25.0%
! GTAAATACGATCTCTATAAA+CGG - chr5.3:59682346-59682365 None:intergenic 25.0%
! TACTAGAACAAAACGAAAAT+TGG - chr5.3:59681050-59681069 None:intergenic 25.0%
! TTTACAGCCTTAAAAACATT+GGG - chr5.3:59678625-59678644 None:intergenic 25.0%
!! AATATGTGCATATAACTTGT+TGG - chr5.3:59680902-59680921 None:intergenic 25.0%
!! ACTTCATAAACATAGGATTT+TGG + chr5.3:59680249-59680268 MS.gene017207:intron 25.0%
!! AGTGTTATGTAAGTTGAATT+TGG - chr5.3:59682085-59682104 None:intergenic 25.0%
!! AGTTTTTGCTGATAATTTTC+TGG - chr5.3:59680790-59680809 None:intergenic 25.0%
!! ATGTTTAAAGTAAAGAACGT+CGG - chr5.3:59680046-59680065 None:intergenic 25.0%
!! CACTTTTAAATTCTTGAGAT+AGG + chr5.3:59679697-59679716 MS.gene017207:intron 25.0%
!! CCTATGTTTATGAAGTTTTA+GGG - chr5.3:59680245-59680264 None:intergenic 25.0%
!! TAACGAGAAAAATTTAGAGT+AGG + chr5.3:59679060-59679079 MS.gene017207:intron 25.0%
!! TCCTATGTTTATGAAGTTTT+AGG - chr5.3:59680246-59680265 None:intergenic 25.0%
!! TTCTATTATATTTTGCAGCT+TGG + chr5.3:59681468-59681487 MS.gene017207:intron 25.0%
!!! AACAACAGTACTTTTTTTAG+AGG + chr5.3:59679866-59679885 MS.gene017207:intron 25.0%
!!! ACAACAGTACTTTTTTTAGA+GGG + chr5.3:59679867-59679886 MS.gene017207:intron 25.0%
AAAAAGACATGTACCAGATA+AGG - chr5.3:59681649-59681668 None:intergenic 30.0%
ACGACATCAAAAAATTACAG+GGG - chr5.3:59679741-59679760 None:intergenic 30.0%
ATAGTTTATTTGCCAAGTCA+AGG + chr5.3:59682382-59682401 MS.gene017207:CDS 30.0%
CACGACATCAAAAAATTACA+GGG - chr5.3:59679742-59679761 None:intergenic 30.0%
CCCTAAAACTTCATAAACAT+AGG + chr5.3:59680242-59680261 MS.gene017207:intron 30.0%
GAGTGAGAAGATATAATTCT+TGG + chr5.3:59681199-59681218 MS.gene017207:intron 30.0%
GTTTACAGCCTTAAAAACAT+TGG - chr5.3:59678626-59678645 None:intergenic 30.0%
TATTGATGCCATAAAGTCTA+AGG + chr5.3:59680404-59680423 MS.gene017207:CDS 30.0%
TCACGACATCAAAAAATTAC+AGG - chr5.3:59679743-59679762 None:intergenic 30.0%
TGACGTAACTATTGCAATAA+TGG + chr5.3:59679446-59679465 MS.gene017207:intron 30.0%
TGCTTGATATATCACACATT+TGG + chr5.3:59681740-59681759 MS.gene017207:intron 30.0%
TTTAGATTATCAGACCATCA+AGG - chr5.3:59682153-59682172 None:intergenic 30.0%
! ATCAATAGGTTTAAAGCTCA+AGG + chr5.3:59681600-59681619 MS.gene017207:CDS 30.0%
! ATTATATTTTGCAGCTTGGA+GGG + chr5.3:59681472-59681491 MS.gene017207:intron 30.0%
! ATTTCTCTAGCAAGTTTTCT+TGG - chr5.3:59678894-59678913 None:intergenic 30.0%
! CATTTTCGCTTAATATCGAA+GGG - chr5.3:59682128-59682147 None:intergenic 30.0%
! GTAGGTAAATTTTGTGATGA+TGG + chr5.3:59679078-59679097 MS.gene017207:intron 30.0%
! TACTTTTCCTATCTCTTTCA+AGG + chr5.3:59679411-59679430 MS.gene017207:intron 30.0%
! TATTATATTTTGCAGCTTGG+AGG + chr5.3:59681471-59681490 MS.gene017207:intron 30.0%
! TGGTCTGATAATCTAAAGTT+CGG + chr5.3:59682156-59682175 MS.gene017207:intron 30.0%
! TTGGTAGTTGATCATAGTAA+TGG - chr5.3:59678875-59678894 None:intergenic 30.0%
! TTGTTTTCTTTGTGCTTCTT+AGG + chr5.3:59682291-59682310 MS.gene017207:intron 30.0%
!! CTGGTGTCTTTAAAACATAT+TGG - chr5.3:59680771-59680790 None:intergenic 30.0%
!! GAGCTTTAAACCTATTGATA+AGG - chr5.3:59681599-59681618 None:intergenic 30.0%
!! TTTATTGTACCACTTTTCCT+TGG - chr5.3:59682420-59682439 None:intergenic 30.0%
!!! CAACAGTACTTTTTTTAGAG+GGG + chr5.3:59679868-59679887 MS.gene017207:intron 30.0%
AAAGCTCTTGATCAGAATGA+AGG - chr5.3:59682530-59682549 None:intergenic 35.0%
AATTACGCCAGAATTTATCG+AGG - chr5.3:59679128-59679147 None:intergenic 35.0%
ACCTATTGATAAGGTTGCTA+AGG - chr5.3:59681590-59681609 None:intergenic 35.0%
ACCTCTCAAAGAATCTTTGT+TGG - chr5.3:59680376-59680395 None:intergenic 35.0%
ACGCGTGTCTAAATAATATG+AGG - chr5.3:59680072-59680091 None:intergenic 35.0%
ACGTACATCAAGCTTCAAAA+AGG - chr5.3:59679996-59680015 None:intergenic 35.0%
AGTAACCAAGTGTTCATATG+AGG + chr5.3:59679216-59679235 MS.gene017207:intron 35.0%
AGTCATGAAAATGAAGACGA+AGG - chr5.3:59678699-59678718 None:intergenic 35.0%
AGTCTTCTCTCCTTTATTAG+AGG - chr5.3:59680346-59680365 None:intergenic 35.0%
ATATTCTCACCAACCTATGT+TGG - chr5.3:59679574-59679593 None:intergenic 35.0%
ATTACGCCAGAATTTATCGA+GGG - chr5.3:59679127-59679146 None:intergenic 35.0%
ATTTCTCCCTCGATAAATTC+TGG + chr5.3:59679118-59679137 MS.gene017207:intron 35.0%
CCAAGTTTAACCTTCCAAAA+TGG - chr5.3:59681498-59681517 None:intergenic 35.0%
CCTATTGATAAGGTTGCTAA+GGG - chr5.3:59681589-59681608 None:intergenic 35.0%
CCTCTCAAAGAATCTTTGTT+GGG - chr5.3:59680375-59680394 None:intergenic 35.0%
CCTTCGATATTAAGCGAAAA+TGG + chr5.3:59682126-59682145 MS.gene017207:intron 35.0%
GAAATCCTCATATGAACACT+TGG - chr5.3:59679224-59679243 None:intergenic 35.0%
GAAGGTTAAACTTGGAAGAA+GGG + chr5.3:59681503-59681522 MS.gene017207:CDS 35.0%
GCTACTGCAATGATTAAGAT+GGG + chr5.3:59682621-59682640 MS.gene017207:CDS 35.0%
GTCTTCTCTCCTTTATTAGA+GGG - chr5.3:59680345-59680364 None:intergenic 35.0%
TAAGACTCCTTGAAAGAGAT+AGG - chr5.3:59679421-59679440 None:intergenic 35.0%
TATCACACATTTGGTTGACT+AGG + chr5.3:59681749-59681768 MS.gene017207:intron 35.0%
TATTCTCACCAACCTATGTT+GGG - chr5.3:59679573-59679592 None:intergenic 35.0%
TGCTACTGCAATGATTAAGA+TGG + chr5.3:59682620-59682639 MS.gene017207:CDS 35.0%
! CCATTTTCGCTTAATATCGA+AGG - chr5.3:59682129-59682148 None:intergenic 35.0%
! CGCAAGTGATTAATGAGTTT+TGG - chr5.3:59682262-59682281 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+TGG + chr5.3:59682534-59682553 MS.gene017207:CDS 35.0%
! TGAGTTGAATATGATCAGTG+AGG + chr5.3:59679311-59679330 MS.gene017207:intron 35.0%
! TGGTACATGTCTTTTTCCTA+TGG + chr5.3:59681653-59681672 MS.gene017207:intron 35.0%
! TTTTCTAAACAGGGTTGTGA+TGG + chr5.3:59680297-59680316 MS.gene017207:intron 35.0%
!! CCATTTTGGAAGGTTAAACT+TGG + chr5.3:59681495-59681514 MS.gene017207:CDS 35.0%
!! GAAGTGTCCCAATGTTTTTA+AGG + chr5.3:59678615-59678634 MS.gene017207:CDS 35.0%
!!! CTTGAGATAGGGTGTTTTTT+TGG + chr5.3:59679709-59679728 MS.gene017207:intron 35.0%
!!! TGAAGTTTTAGGGCAATGAT+AGG - chr5.3:59680235-59680254 None:intergenic 35.0%
AAATCGCTCTCAAAGATGAG+TGG - chr5.3:59679542-59679561 None:intergenic 40.0%
AAATTTAGACCGTGTGCATG+TGG + chr5.3:59680107-59680126 MS.gene017207:intron 40.0%
AAGGTTGCTAAGGGTAGAAA+AGG - chr5.3:59681580-59681599 None:intergenic 40.0%
AGCATGACATGAAGTTTACG+TGG - chr5.3:59681792-59681811 None:intergenic 40.0%
AGGAATTGTCCAAGGAAAAG+TGG + chr5.3:59682408-59682427 MS.gene017207:CDS 40.0%
AGGTTGCTAAGGGTAGAAAA+GGG - chr5.3:59681579-59681598 None:intergenic 40.0%
ATGTAGAGAGACTGTAGACT+TGG + chr5.3:59680839-59680858 MS.gene017207:intron 40.0%
ATTCTCACCAACCTATGTTG+GGG - chr5.3:59679572-59679591 None:intergenic 40.0%
ATTTACCATGTCCCCAACAT+AGG + chr5.3:59679558-59679577 MS.gene017207:intron 40.0%
CCCAACAAAGATTCTTTGAG+AGG + chr5.3:59680372-59680391 MS.gene017207:CDS 40.0%
CCCTTAGCAACCTTATCAAT+AGG + chr5.3:59681586-59681605 MS.gene017207:CDS 40.0%
CTCACACAATTGGAAAAGCA+AGG + chr5.3:59682316-59682335 MS.gene017207:CDS 40.0%
GATGACACACCCTCTAATAA+AGG + chr5.3:59680333-59680352 MS.gene017207:CDS 40.0%
GGAAATAACAAGCCTCTTAC+CGG + chr5.3:59682642-59682661 MS.gene017207:CDS 40.0%
GGAAGGTTAAACTTGGAAGA+AGG + chr5.3:59681502-59681521 MS.gene017207:CDS 40.0%
TAAGCGAAAATGGACCTTGA+TGG + chr5.3:59682136-59682155 MS.gene017207:intron 40.0%
TCTACAGTCTCTCTACATCA+AGG - chr5.3:59680837-59680856 None:intergenic 40.0%
TGACTCCACCTTAGACTTTA+TGG - chr5.3:59680415-59680434 None:intergenic 40.0%
TGATGCCATAAAGTCTAAGG+TGG + chr5.3:59680407-59680426 MS.gene017207:CDS 40.0%
TTCTTAGGAGCTCACACAAT+TGG + chr5.3:59682306-59682325 MS.gene017207:intron 40.0%
TTTGTAAAGCCACATGCACA+CGG - chr5.3:59680119-59680138 None:intergenic 40.0%
! GATCAAGAGCTTTTCAATGG+AGG + chr5.3:59682537-59682556 MS.gene017207:CDS 40.0%
! TCTTGGCTTTCTTGTTGACA+TGG + chr5.3:59681216-59681235 MS.gene017207:intron 40.0%
! TTTTCATGTCGTTACGCTAC+TGG + chr5.3:59679367-59679386 MS.gene017207:intron 40.0%
!! GAATCTGTTTGGTTTGACGA+TGG + chr5.3:59681153-59681172 MS.gene017207:intron 40.0%
!! TGGAGGATCTACTGATTCAT+TGG + chr5.3:59682554-59682573 MS.gene017207:CDS 40.0%
!!! GGTTTGGTGTTTTGAAGTCT+AGG - chr5.3:59682461-59682480 None:intergenic 40.0%
AACAGAATCACGAGCAGCAA+TGG - chr5.3:59680475-59680494 None:intergenic 45.0%
AAGCCTCTTACCGGATCAAA+TGG + chr5.3:59682651-59682670 MS.gene017207:CDS 45.0%
ACAATTCCTCTGCCTTGACT+TGG - chr5.3:59682397-59682416 None:intergenic 45.0%
ACTCTCTACTAAGGACATGG+TGG + chr5.3:59681623-59681642 MS.gene017207:CDS 45.0%
ACTGTTTGCATCATTGAGGC+TGG - chr5.3:59681541-59681560 None:intergenic 45.0%
AGCCTCAATGATGCAAACAG+TGG + chr5.3:59681540-59681559 MS.gene017207:CDS 45.0%
AGCCTCTTACCGGATCAAAT+GGG + chr5.3:59682652-59682671 MS.gene017207:CDS 45.0%
AGCTCAAGGACTCTCTACTA+AGG + chr5.3:59681614-59681633 MS.gene017207:CDS 45.0%
AGGACTCTCTACTAAGGACA+TGG + chr5.3:59681620-59681639 MS.gene017207:CDS 45.0%
CACCACTGTTTGCATCATTG+AGG - chr5.3:59681545-59681564 None:intergenic 45.0%
CCTAATCTCCCCATTTGATC+CGG - chr5.3:59682664-59682683 None:intergenic 45.0%
GACTGTAGACTTGGATGAAG+TGG + chr5.3:59680848-59680867 MS.gene017207:intron 45.0%
GGGAGATTAGGAAGCAATGT+AGG + chr5.3:59682673-59682692 MS.gene017207:CDS 45.0%
TATTTGCCAAGTCAAGGCAG+AGG + chr5.3:59682388-59682407 MS.gene017207:CDS 45.0%
TTGCTAAGGGTAGAAAAGGG+AGG - chr5.3:59681576-59681595 None:intergenic 45.0%
!! GTACTCTGACTCTAGAGTCT+TGG + chr5.3:59681980-59681999 MS.gene017207:intron 45.0%
ACCAACCTATGTTGGGGACA+TGG - chr5.3:59679566-59679585 None:intergenic 50.0%
ACCATGTCCCCAACATAGGT+TGG + chr5.3:59679562-59679581 MS.gene017207:intron 50.0%
AGCGACAGCAGAGTGAACAA+CGG - chr5.3:59678650-59678669 None:intergenic 50.0%
ATCAGCACATGAGACCACAC+CGG - chr5.3:59680445-59680464 None:intergenic 50.0%
CAAGGCAGAGGAATTGTCCA+AGG + chr5.3:59682400-59682419 MS.gene017207:CDS 50.0%
CCGGATCAAATGGGGAGATT+AGG + chr5.3:59682661-59682680 MS.gene017207:CDS 50.0%
CTAAGGGTAGAAAAGGGAGG+TGG - chr5.3:59681573-59681592 None:intergenic 50.0%
GCCTCTTACCGGATCAAATG+GGG + chr5.3:59682653-59682672 MS.gene017207:CDS 50.0%
GGCATGACATGCAATGTACG+TGG - chr5.3:59681029-59681048 None:intergenic 50.0%
TCCCCATTTGATCCGGTAAG+AGG - chr5.3:59682657-59682676 None:intergenic 50.0%
!! AAGGACATGGTGGCCTTATC+TGG + chr5.3:59681633-59681652 MS.gene017207:CDS 50.0%
AAGGTGGAGTCAGTATGCCC+CGG + chr5.3:59680423-59680442 MS.gene017207:CDS 55.0%
GTCGCTAGAGAACCTCGCAT+GGG + chr5.3:59678664-59678683 MS.gene017207:CDS 55.0%
TCAGCACATGAGACCACACC+GGG - chr5.3:59680444-59680463 None:intergenic 55.0%
TGTCGCTAGAGAACCTCGCA+TGG + chr5.3:59678663-59678682 MS.gene017207:CDS 55.0%
! TGCAGCTTGGAGGGCCATTT+TGG + chr5.3:59681481-59681500 MS.gene017207:intron 55.0%
!! GCTTGGAGGGCCATTTTGGA+AGG + chr5.3:59681485-59681504 MS.gene017207:intron 55.0%
AGGAGAGATCCTCCCATGCG+AGG - chr5.3:59678679-59678698 None:intergenic 60.0%
CAGCACATGAGACCACACCG+GGG - chr5.3:59680443-59680462 None:intergenic 60.0%
GCTAGAGAACCTCGCATGGG+AGG + chr5.3:59678667-59678686 MS.gene017207:CDS 60.0%
GGAGTCAGTATGCCCCGGTG+TGG + chr5.3:59680428-59680447 MS.gene017207:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 59678505 59682707 59678505 ID=MS.gene017207
chr5.3 mRNA 59678505 59682707 59678505 ID=MS.gene017207.t1;Parent=MS.gene017207
chr5.3 exon 59678505 59678729 59678505 ID=MS.gene017207.t1.exon1;Parent=MS.gene017207.t1
chr5.3 CDS 59678505 59678729 59678505 ID=cds.MS.gene017207.t1;Parent=MS.gene017207.t1
chr5.3 exon 59680309 59680500 59680309 ID=MS.gene017207.t1.exon2;Parent=MS.gene017207.t1
chr5.3 CDS 59680309 59680500 59680309 ID=cds.MS.gene017207.t1;Parent=MS.gene017207.t1
chr5.3 exon 59681486 59681654 59681486 ID=MS.gene017207.t1.exon3;Parent=MS.gene017207.t1
chr5.3 CDS 59681486 59681654 59681486 ID=cds.MS.gene017207.t1;Parent=MS.gene017207.t1
chr5.3 exon 59682313 59682707 59682313 ID=MS.gene017207.t1.exon4;Parent=MS.gene017207.t1
chr5.3 CDS 59682313 59682707 59682313 ID=cds.MS.gene017207.t1;Parent=MS.gene017207.t1
Gene Sequence

>MS.gene017207

ATGGCACTTTCTTCTTCTAAAGTTTCACTAAACTTTTTTTGCTTTGTTTTGTTCATGTTTTATCTTATAGATGGTTCTTTTTCTCAACTATCTGAAAATTTCTATGCTAAGAAGTGTCCCAATGTTTTTAAGGCTGTAAACTCCGTTGTTCACTCTGCTGTCGCTAGAGAACCTCGCATGGGAGGATCTCTCCTTCGTCTTCATTTTCATGACTGCTTTGTCAATGTAAATTAATCTTCAAACTAAGTTCTTATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTCTCTTTAGTTATATATTGTTATATACCATTACTATGATCAACTACCAAGAAAACTTGCTAGAGAAATTGAGAGAGAAAACATGAATATTTTCTCTAAATCCGTCACTAATTTAATGATGATGAAATTAGAGAAATATTTCATTTTTTTTTGTCACTAATTTTTTTTTCTCTATTATTATTTATCATTACTATATTATCTACTACTAATAAAACTAACGAGAAAAATTTAGAGTAGGTAAATTTTGTGATGATGGTATTAGAAAGTGATTTCATTTCTCCCTCGATAAATTCTGGCGTAATTTATTTTTTCTAATAGTGATATATAATCAATATTATTATTTTTTTGACAAATAATCCATATTATTATTTAGTAACCAAGTGTTCATATGAGGATTTCAAATGTGAAAATAAAAATATTAATATAGATAATAGATTGAATATATTATTTTTTGGTAGTTTGATAATGAGTTGAATATGATCAGTGAGGAATATTGAGTGAATTGAATAGGGTCATATACACTTTTCATGTCGTTACGCTACTGGACTATTTATACTTTATTTTTATACTTTTCCTATCTCTTTCAAGGAGTCTTATTGAGTGACGTAACTATTGCAATAATGGAACATTTCATGCATAATTGAAAAAGAAGTAAAATGAACTGTCTATTGTTTGCATGAAATATTATTATGCACCACTCATCTTTGAGAGCGATTTACCATGTCCCCAACATAGGTTGGTGAGAATATATTTAAAAAAAATTAGCCAAAAAATTACTAAATTTGTGTCGGTTGAATGTGATTTTTTAAACAATTTCCTATTTGAATATGTACTAAATTATGCATGGATATGCACTTTTAAATTCTTGAGATAGGGTGTTTTTTTGGCAAGTACCCCTGTAATTTTTTGATGTCGTGAGCTAAATACTCTTTGTACTTATCCCCTTAATCTTTATCTAATAAATTTGGCTGTTCAACAGAAATTTCTTTTAGAAACATTGAATTCTCTTAATAGTAATGAAAACAACAGTACTTTTTTTAGAGGGGAAAACAACAGTACAAATTAGTCTATTATTTCTTGTTAAAAAGATTAACTGCTTATTTGCATTGCGAATAAGAATATTCTGAACAAAAAAGTAAAAGATAAATCCTTTTTGAAGCTTGATGTACGTGTGCTAACAAAAAGTTTATATTCAAGTCCGACGTTCTTTACTTTAAACATACACCTCATATTATTTAGACACGCGTTACAAACTATTTTACAAATTTAGACCGTGTGCATGTGGCTTTACAAATTCAACCATATTTAGCATATCAGACAATTTAAATGTGATTGACTACGCGCAATCGAATAATTTTAAATTGTAAACAACTCAAATTCTTATTTACCTATCATTGCCCTAAAACTTCATAAACATAGGATTTTGGTGAACGAACTTATCATAAATCACTTTTTTCTAAACAGGGTTGTGATGGATCAGTGCTACTTGATGACACACCCTCTAATAAAGGAGAGAAGACTGCACTTCCCAACAAAGATTCTTTGAGAGGTTTTGAAGTTATTGATGCCATAAAGTCTAAGGTGGAGTCAGTATGCCCCGGTGTGGTCTCATGTGCTGATATCTTAGCCATTGCTGCTCGTGATTCTGTTGTAAATGTGAGTACAAAATCAATATGCTAAACATTGAATTTTTAGTAATTTTTCAAATGTAAATTAACTACCAGAAAAAGTTTAATAATGAACGAAAATAGATACGTAAAAGTTTAATCATGAACGAAAATAGATACTTAAAACATAGAATTGACATCTAATTATTTTGGTGTTTGTAAAATGGGCGTAGTGATTTGTTTTTTTTATTTTTAGAAATTATATATTTGCTTCATTAAATTAGTTGCTTAAATATAATGTTTACAAGTCTTGGTACCAATATGTTTTAAAGACACCAGAAAATTATCAGCAAAAACTATAAAATATTGAAATTCAGAGCAGCCTTGATGTAGAGAGACTGTAGACTTGGATGAAGTGGAATTTGATACTTGCATAAATTATATTATCCAACAAGTTATATGCACATATTAGTTTATTTTTATTGAAGAGATTTTTAATGGAATAGTCATAGAAACAAAGTTATATCATATATTTACAATAATAAAATATAGATCAAGTGTGACGTTTAAACAACCACGTACATTGCATGTCATGCCAATTTTCGTTTTGTTCTAGTAAGTGACTTTAAATATAAAAGACACACACATATTTATGAATTAATTATTGCTTCACAATAATTTATACTAATAATAATTTCGAAGAATCTGTTTGGTTTGACGATGGAAGTGTCAACATGACGTTTAAACGAGTGAGAAGATATAATTCTTGGCTTTCTTGTTGACATGGTTTTCTGCCTTGATTTTGCTAAACATAACTTCTTACATAAAATATACAAGCTAAATAATGATACATATAGATGCTTAATTAATCTAACACTCATTTTTTTTTTTGTTGTTGTCAAACTAAAAAAATGGTATAATATATAATTTATAAAAATTTAAAAATCCTCATTTCTTTTCTTCTAATAAATGCTTATATTTTCATTCTATCATATTAGTTTTTAAATTTATTTTTATTCTATTATATTTTGCAGCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCCAGCCTCAATGATGCAAACAGTGGTGTAATTCCACCTCCCTTTTCTACCCTTAGCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTGGCCTTATCTGGTACATGTCTTTTTCCTATGGTATCTAATTTAAACATTTTTTCTTCTAACTTCCATTATTATGATACAATTATTAGTTTTTATTTTGCTTGATATATCACACATTTGGTTGACTAGGATGTGATGTTTAAACAACCACGTAAACTTCATGTCATGCTTAATTTTCGTTTTGTTTTAAGTGACTTCTAATAAAAAAAAAAGAACAATGACACAAAAAACATGTTTATCCAACCAAGAAAATACATTTAATTATTGGTTATGTTTGAATAATGTTTCCAAAGTTAAAATGAATAGTAACACCGTTTAGATTTCATTTTCAACACTTAGTACTCTGACTCTAGAGTCTTGGAATATACAAATTCAACTTACATAGCACTATTGATTAATAAATCTAAATATTATTTGAACATTAAGAAATTATTCAAGTGCCAAATTCAACTTACATAACACTATTTATTTTTTTAGTTTCAACCCTTCGATATTAAGCGAAAATGGACCTTGATGGTCTGATAATCTAAAGTTCGGTCTGAATATAAGTAAAATCTTATTAAAGATTGTCTCAAACATAATTCAAATTCGAATTCTCTTGAACGATTCGTTACGAACCAAAACTCATTAATCACTTGCGTCTAACTATTTGTTTTCTTTGTGCTTCTTAGGAGCTCACACAATTGGAAAAGCAAGGTGTACCGTTTATAGAGATCGTATTTACAATGATACAAATATTGATAGTTTATTTGCCAAGTCAAGGCAGAGGAATTGTCCAAGGAAAAGTGGTACAATAAAAGACAACAATGTAGCTGTCCTAGACTTCAAAACACCAAACCATTTTGATAACTTATACTACAAGAATCTCATCAACAAAAAAGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACTGATTCATTGGTTAAAAGTTATAGCAATAATCAAAATGCATTTGAATCTGATTTTGCTACTGCAATGATTAAGATGGGAAATAACAAGCCTCTTACCGGATCAAATGGGGAGATTAGGAAGCAATGTAGGAGAGCCAATTAA
Protein sequence

>MS.gene017207.t1

MALSSSKVSLNFFCFVLFMFYLIDGSFSQLSENFYAKKCPNVFKAVNSVVHSAVAREPRMGGSLLRLHFHDCFVNGCDGSVLLDDTPSNKGEKTALPNKDSLRGFEVIDAIKSKVESVCPGVVSCADILAIAARDSVVNLGGPFWKVKLGRRDSKTASLNDANSGVIPPPFSTLSNLINRFKAQGLSTKDMVALSGAHTIGKARCTVYRDRIYNDTNIDSLFAKSRQRNCPRKSGTIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQNAFESDFATAMIKMGNNKPLTGSNGEIRKQCRRAN