AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009691

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009691.t1 MTR_5g074970 97.546 326 8 0 1 326 1 326 0.0 652
MS.gene009691.t1 MTR_3g466200 72.013 318 88 1 9 326 4 320 4.48e-171 478
MS.gene009691.t1 MTR_3g094650 65.123 324 108 4 3 326 4 322 3.74e-149 422
MS.gene009691.t1 MTR_5g083860 64.444 315 110 2 12 326 13 325 1.49e-146 416
MS.gene009691.t1 MTR_3g094670 63.722 317 112 3 10 326 9 322 1.63e-137 393
MS.gene009691.t1 MTR_4g029170 61.300 323 121 2 5 326 2 321 5.34e-135 386
MS.gene009691.t1 MTR_3g094630 63.344 311 112 2 16 326 14 322 5.21e-133 381
MS.gene009691.t1 MTR_4g029200 59.667 300 117 2 27 326 43 338 3.45e-130 375
MS.gene009691.t1 MTR_3g072190 58.934 319 120 4 15 326 4 318 1.63e-127 367
MS.gene009691.t1 MTR_7g072510 58.333 312 126 2 15 326 5 312 1.64e-127 367
MS.gene009691.t1 MTR_4g029180 63.051 295 105 2 33 326 30 321 1.40e-126 365
MS.gene009691.t1 MTR_4g029190 58.766 308 120 4 22 326 37 340 1.62e-126 365
MS.gene009691.t1 MTR_7g072480 60.000 310 120 2 17 326 11 316 5.26e-125 361
MS.gene009691.t1 MTR_4g083710 57.143 315 130 4 15 326 12 324 7.15e-125 360
MS.gene009691.t1 MTR_2g084080 57.643 314 127 3 15 326 8 317 9.72e-125 360
MS.gene009691.t1 MTR_5g074740 56.832 322 129 7 10 326 5 321 9.72e-123 355
MS.gene009691.t1 MTR_5g074860 57.273 330 130 7 1 325 1 324 3.46e-122 354
MS.gene009691.t1 MTR_2g084110 57.006 314 129 3 15 326 8 317 3.69e-122 353
MS.gene009691.t1 MTR_5g074760 56.211 322 131 7 10 326 5 321 1.16e-121 352
MS.gene009691.t1 MTR_3g466180 58.462 325 125 4 7 326 4 323 1.20e-121 352
MS.gene009691.t1 MTR_4g074995 55.732 314 123 4 15 326 9 308 1.82e-120 349
MS.gene009691.t1 MTR_2g084090 55.911 313 134 3 15 326 9 318 5.67e-119 345
MS.gene009691.t1 MTR_5g074710 55.215 326 134 8 6 326 3 321 6.29e-119 345
MS.gene009691.t1 MTR_3g467600 55.000 320 135 6 12 326 9 324 4.80e-118 343
MS.gene009691.t1 MTR_1g115900 53.495 329 142 5 1 326 1 321 1.69e-117 342
MS.gene009691.t1 MTR_2g084020 55.625 320 136 4 9 326 3 318 2.88e-117 341
MS.gene009691.t1 MTR_7g026990 55.455 330 135 7 1 326 1 322 6.86e-117 340
MS.gene009691.t1 MTR_2g084010 56.436 303 127 3 25 326 20 318 6.25e-115 335
MS.gene009691.t1 MTR_2g084000 53.943 317 139 4 13 326 7 319 3.35e-112 328
MS.gene009691.t1 MTR_4g074990 52.548 314 130 4 15 326 9 305 2.18e-111 326
MS.gene009691.t1 MTR_5g017850 50.156 321 149 3 13 326 10 326 4.88e-105 310
MS.gene009691.t1 MTR_3g072190 61.811 254 93 2 73 326 2 251 4.99e-105 308
MS.gene009691.t1 MTR_5g021060 52.787 305 132 4 30 326 30 330 9.80e-105 310
MS.gene009691.t1 MTR_5g017860 49.844 321 150 3 13 326 10 326 1.19e-104 309
MS.gene009691.t1 MTR_1g054205 49.221 321 149 5 16 326 10 326 5.33e-103 305
MS.gene009691.t1 MTR_4g125940 51.227 326 141 6 13 326 10 329 1.80e-102 304
MS.gene009691.t1 MTR_8g076820 51.792 307 136 4 28 326 28 330 4.31e-102 303
MS.gene009691.t1 MTR_7g093370 47.988 323 152 6 15 326 54 371 1.01e-100 301
MS.gene009691.t1 MTR_2g029730 47.962 319 153 4 17 326 12 326 7.46e-100 298
MS.gene009691.t1 MTR_2g040000 50.915 328 140 6 14 326 10 331 7.92e-100 297
MS.gene009691.t1 MTR_1g022970 51.961 306 134 4 30 326 46 347 7.00e-99 295
MS.gene009691.t1 MTR_2g029560 47.095 327 160 5 9 326 3 325 1.04e-98 295
MS.gene009691.t1 MTR_5g049280 47.273 330 155 7 13 326 11 337 2.57e-98 294
MS.gene009691.t1 MTR_2g028980 48.503 334 158 5 3 326 1 330 6.05e-98 293
MS.gene009691.t1 MTR_4g122640 51.475 305 138 4 28 326 36 336 8.69e-98 292
MS.gene009691.t1 MTR_4g074980 50.498 301 118 6 28 326 23 294 1.91e-97 290
MS.gene009691.t1 MTR_2g029750 49.096 332 156 4 4 326 3 330 1.27e-96 290
MS.gene009691.t1 MTR_2g029800 48.758 322 152 4 14 326 13 330 2.36e-96 289
MS.gene009691.t1 MTR_2g029820 47.720 329 157 5 8 326 7 330 1.68e-94 285
MS.gene009691.t1 MTR_2g029830 49.518 311 144 4 25 326 23 329 1.78e-94 285
MS.gene009691.t1 MTR_2g029815 47.385 325 155 6 13 326 11 330 4.21e-94 283
MS.gene009691.t1 MTR_2g029740 48.204 334 159 6 3 326 1 330 9.47e-94 283
MS.gene009691.t1 MTR_5g014100 49.839 311 137 5 30 326 26 331 3.10e-92 278
MS.gene009691.t1 MTR_4g125940 53.047 279 114 5 59 326 2 274 3.19e-92 276
MS.gene009691.t1 MTR_2g029860 46.364 330 161 6 8 326 6 330 8.41e-92 278
MS.gene009691.t1 MTR_5g074860 48.788 330 119 8 1 325 1 285 9.69e-92 275
MS.gene009691.t1 MTR_4g074980 55.365 233 100 3 28 258 23 253 7.97e-90 269
MS.gene009691.t1 MTR_4g030890 46.624 311 152 5 23 326 93 396 7.45e-89 272
MS.gene009691.t1 MTR_2g029910 45.031 322 165 4 14 326 14 332 1.91e-88 269
MS.gene009691.t1 MTR_4g031140 46.078 306 151 5 28 326 26 324 3.37e-88 268
MS.gene009691.t1 MTR_2g029850 45.679 324 159 5 14 326 13 330 1.30e-87 267
MS.gene009691.t1 MTR_0155s0040 43.750 320 170 5 8 326 5 315 2.43e-85 259
MS.gene009691.t1 MTR_1g077000 41.369 336 178 6 1 326 1 327 9.55e-84 256
MS.gene009691.t1 MTR_4g046713 41.486 323 176 5 12 326 9 326 3.12e-83 254
MS.gene009691.t1 MTR_2g088770 44.062 320 164 7 16 326 12 325 1.73e-82 253
MS.gene009691.t1 MTR_3g092990 41.975 324 178 3 10 326 6 326 2.12e-80 248
MS.gene009691.t1 MTR_1g038680 44.554 303 155 5 34 326 33 332 7.88e-80 246
MS.gene009691.t1 MTR_1g086320 41.071 336 185 5 1 326 1 333 6.57e-79 244
MS.gene009691.t1 MTR_7g029030 42.769 325 174 7 7 326 3 320 7.23e-78 241
MS.gene009691.t1 MTR_2g008710 41.846 325 167 8 15 326 10 325 4.28e-76 236
MS.gene009691.t1 MTR_1g101830 39.815 324 178 7 11 326 8 322 6.29e-76 236
MS.gene009691.t1 MTR_1g025980 42.587 317 164 7 15 322 7 314 2.35e-75 234
MS.gene009691.t1 MTR_2g029830 49.231 260 119 4 76 326 6 261 2.77e-75 233
MS.gene009691.t1 MTR_1g086490 40.299 335 182 5 8 326 8 340 4.82e-75 234
MS.gene009691.t1 MTR_6g027440 40.064 312 182 3 16 326 7 314 2.18e-74 232
MS.gene009691.t1 MTR_5g022870 41.325 317 169 5 17 326 10 316 6.19e-74 231
MS.gene009691.t1 MTR_4g087965 42.651 347 169 8 1 322 1 342 1.28e-73 231
MS.gene009691.t1 MTR_6g043280 43.046 302 157 6 30 326 41 332 3.33e-73 229
MS.gene009691.t1 MTR_4g114210 41.158 311 162 6 28 326 19 320 1.89e-72 227
MS.gene009691.t1 MTR_2g437770 40.328 305 161 6 30 326 50 341 1.63e-71 225
MS.gene009691.t1 MTR_8g075100 40.127 314 161 6 25 326 21 319 6.55e-71 223
MS.gene009691.t1 MTR_4g133800 40.333 300 159 6 35 326 46 333 1.03e-70 223
MS.gene009691.t1 MTR_7g086820 39.274 303 170 4 26 323 16 309 3.89e-69 218
MS.gene009691.t1 MTR_3g092990 39.815 324 174 4 10 326 6 315 1.02e-68 217
MS.gene009691.t1 MTR_7g107520 39.498 319 177 7 15 326 11 320 2.98e-68 216
MS.gene009691.t1 MTR_1g090760 37.462 331 189 7 11 326 3 330 3.95e-66 211
MS.gene009691.t1 MTR_7g086870 38.255 298 175 4 30 326 22 311 4.00e-66 210
MS.gene009691.t1 MTR_5g074700 52.863 227 87 8 103 326 5 214 4.37e-66 207
MS.gene009691.t1 MTR_6g043460 37.952 332 188 7 1 322 1 324 1.56e-65 210
MS.gene009691.t1 MTR_0286s0010 38.580 324 179 8 17 326 17 334 1.94e-65 209
MS.gene009691.t1 MTR_6g008075 38.580 324 179 8 17 326 17 334 1.94e-65 209
MS.gene009691.t1 MTR_3g072210 58.421 190 73 5 139 326 53 238 6.63e-65 205
MS.gene009691.t1 MTR_8g062780 38.700 323 185 5 13 326 6 324 2.28e-64 206
MS.gene009691.t1 MTR_2g077990 39.039 333 165 9 28 324 74 404 8.57e-64 207
MS.gene009691.t1 MTR_5g016010 38.318 321 178 8 16 322 11 325 1.09e-63 205
MS.gene009691.t1 MTR_4g095450 40.566 318 174 9 13 322 10 320 2.60e-63 204
MS.gene009691.t1 MTR_2g008160 39.937 318 166 7 23 326 17 323 2.69e-63 203
MS.gene009691.t1 MTR_2g078610 38.138 333 168 8 28 324 74 404 3.71e-63 206
MS.gene009691.t1 MTR_2g067440 37.048 332 172 7 28 325 58 386 3.76e-63 205
MS.gene009691.t1 MTR_6g043240 36.257 342 191 7 1 326 1 331 1.57e-62 202
MS.gene009691.t1 MTR_4g127670 41.479 311 159 10 29 326 23 323 2.77e-62 201
MS.gene009691.t1 MTR_5g033470 36.808 307 184 4 29 326 72 377 3.19e-62 202
MS.gene009691.t1 MTR_4g132110 36.137 321 199 4 10 326 10 328 5.30e-62 201
MS.gene009691.t1 MTR_1g009750 37.160 331 190 7 9 326 3 328 1.95e-60 196
MS.gene009691.t1 MTR_3g105790 35.276 326 192 5 11 326 6 322 3.75e-60 196
MS.gene009691.t1 MTR_1g066380 36.424 302 188 3 27 326 24 323 3.81e-60 196
MS.gene009691.t1 MTR_1g066640 37.542 301 184 3 28 326 25 323 7.42e-60 195
MS.gene009691.t1 MTR_4g132110 35.583 326 199 5 10 326 10 333 9.32e-60 195
MS.gene009691.t1 MTR_4g132490 34.700 317 197 4 16 326 15 327 2.55e-59 193
MS.gene009691.t1 MTR_2g008730 44.309 246 120 5 92 326 62 301 4.43e-59 192
MS.gene009691.t1 MTR_2g078280 38.629 321 159 9 28 312 74 392 7.03e-59 194
MS.gene009691.t1 MTR_1g066680 36.545 301 186 4 28 326 25 322 8.07e-59 192
MS.gene009691.t1 MTR_1g066710 36.545 301 187 3 28 326 25 323 1.96e-58 191
MS.gene009691.t1 MTR_2g099175 35.831 307 182 5 29 326 35 335 8.49e-58 190
MS.gene009691.t1 MTR_7g072490 44.672 244 77 2 76 319 2 187 3.32e-56 181
MS.gene009691.t1 MTR_0147s0010 34.062 320 172 6 30 325 77 381 5.81e-55 184
MS.gene009691.t1 MTR_2g067450 36.570 309 177 8 28 325 9 309 3.98e-53 177
MS.gene009691.t1 MTR_2g008160 37.662 308 144 7 23 322 17 284 2.51e-52 174
MS.gene009691.t1 MTR_1g009750 33.739 329 187 7 9 326 3 311 6.41e-50 169
MS.gene009691.t1 MTR_1g066380 36.863 255 157 3 74 326 3 255 1.88e-49 166
MS.gene009691.t1 MTR_2g008160 45.506 178 92 3 23 200 17 189 3.44e-44 150
MS.gene009691.t1 MTR_3g072260 56.489 131 51 1 15 139 5 135 1.24e-43 147
MS.gene009691.t1 MTR_3g105790 37.083 240 136 4 97 326 12 246 8.49e-41 143
MS.gene009691.t1 MTR_2g029880 39.175 194 95 4 142 326 9 188 6.64e-37 132
MS.gene009691.t1 MTR_2g077980 31.636 275 143 9 92 324 11 282 4.26e-28 110
MS.gene009691.t1 MTR_5g074770 52.128 94 42 2 234 325 16 108 2.48e-25 98.2
MS.gene009691.t1 MTR_5g058120 35.256 156 94 2 167 322 7 155 6.75e-25 101
MS.gene009691.t1 MTR_2g078560 31.839 223 116 7 135 322 95 316 9.14e-24 99.8
MS.gene009691.t1 MTR_4g114220 56.098 82 26 2 56 137 29 100 3.77e-23 93.6
MS.gene009691.t1 MTR_6g048160 65.714 70 20 2 69 138 22 87 4.01e-23 92.0
MS.gene009691.t1 MTR_3g462850 39.161 143 74 5 195 326 9 149 3.09e-22 91.3
MS.gene009691.t1 MTR_4g031040 35.882 170 68 5 91 260 3 131 2.88e-21 88.2
MS.gene009691.t1 MTR_7g086790 41.322 121 66 3 77 197 17 132 2.84e-20 87.4
MS.gene009691.t1 MTR_1g089005 37.879 132 75 2 16 141 1 131 2.22e-19 84.0
MS.gene009691.t1 MTR_1g098320 36.937 111 70 0 216 326 14 124 5.10e-19 82.4
MS.gene009691.t1 MTR_3g086710 55.556 54 24 0 22 75 11 64 2.39e-13 65.5
MS.gene009691.t1 MTR_2g029930 35.870 92 34 2 28 108 17 94 4.56e-13 65.1
MS.gene009691.t1 MTR_7g086810 30.508 118 56 1 26 143 2 93 2.85e-12 65.9
MS.gene009691.t1 MTR_0147s0040 35.616 73 47 0 252 324 9 81 2.46e-11 59.7
MS.gene009691.t1 MTR_4g012865 39.706 68 41 0 30 97 77 144 5.39e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009691.t1 AT5G58390 66.026 312 105 1 15 326 6 316 3.03e-143 407
MS.gene009691.t1 AT5G58400 62.739 314 116 1 13 326 13 325 3.54e-142 405
MS.gene009691.t1 AT5G05340 65.886 299 100 2 28 326 28 324 1.26e-141 403
MS.gene009691.t1 AT1G14550 55.836 317 132 4 15 326 8 321 7.10e-120 348
MS.gene009691.t1 AT1G14540 50.784 319 151 4 10 326 1 315 1.15e-106 314
MS.gene009691.t1 AT5G06720 49.544 329 146 5 14 326 9 333 3.03e-105 311
MS.gene009691.t1 AT4G36430 51.961 306 135 4 29 326 29 330 1.18e-104 310
MS.gene009691.t1 AT5G06730 47.337 338 162 6 1 326 1 334 1.28e-104 310
MS.gene009691.t1 AT3G50990 51.290 310 139 5 25 326 36 341 5.82e-103 306
MS.gene009691.t1 AT5G66390 50.492 305 139 4 30 326 33 333 1.35e-102 305
MS.gene009691.t1 AT2G18150 51.827 301 133 4 34 326 40 336 9.45e-102 302
MS.gene009691.t1 AT1G44970 50.641 312 141 4 24 326 39 346 1.87e-101 302
MS.gene009691.t1 AT2G18140 50.331 302 138 4 33 326 38 335 2.47e-97 291
MS.gene009691.t1 AT4G16270 51.815 303 128 6 34 326 54 348 7.06e-96 288
MS.gene009691.t1 AT1G68850 44.012 334 162 6 16 326 4 335 4.20e-94 283
MS.gene009691.t1 AT1G49570 50.329 304 139 4 28 322 46 346 4.82e-94 283
MS.gene009691.t1 AT4G08770 47.799 318 145 6 23 326 17 327 8.24e-94 283
MS.gene009691.t1 AT5G19890 46.866 335 156 7 4 326 3 327 1.95e-93 281
MS.gene009691.t1 AT2G35380 45.833 336 171 3 1 326 1 335 4.53e-93 280
MS.gene009691.t1 AT4G08780 46.855 318 148 6 23 326 17 327 2.24e-92 279
MS.gene009691.t1 AT5G19880 47.077 325 155 6 15 326 9 329 5.80e-92 277
MS.gene009691.t1 AT2G38390 47.097 310 148 6 28 326 29 333 4.77e-91 276
MS.gene009691.t1 AT3G49110 47.205 322 147 7 21 326 22 336 4.88e-90 273
MS.gene009691.t1 AT3G32980 46.106 321 152 7 21 326 20 334 5.82e-90 273
MS.gene009691.t1 AT2G38380 47.097 310 148 6 28 326 29 333 1.64e-89 271
MS.gene009691.t1 AT3G49120 46.178 314 150 6 26 326 28 335 7.18e-88 268
MS.gene009691.t1 AT3G01190 43.438 320 161 9 17 326 12 321 9.67e-84 256
MS.gene009691.t1 AT2G22420 42.812 320 168 5 15 326 7 319 8.31e-82 251
MS.gene009691.t1 AT1G05260 43.438 320 164 8 17 326 13 325 6.01e-81 249
MS.gene009691.t1 AT4G33420 42.857 322 172 6 8 326 13 325 7.31e-81 249
MS.gene009691.t1 AT1G71695 44.186 301 159 4 30 326 44 339 1.14e-80 249
MS.gene009691.t1 AT4G33420 42.857 322 172 6 8 326 60 372 3.85e-80 248
MS.gene009691.t1 AT3G03670 40.373 322 178 5 13 326 6 321 3.20e-79 244
MS.gene009691.t1 AT4G11290 40.994 322 175 7 15 326 10 326 1.42e-77 240
MS.gene009691.t1 AT5G51890 39.875 321 179 6 13 326 9 322 2.25e-77 239
MS.gene009691.t1 AT5G17820 40.187 321 171 6 13 326 7 313 1.46e-76 237
MS.gene009691.t1 AT5G17820 40.187 321 171 6 13 326 60 366 1.97e-75 236
MS.gene009691.t1 AT5G15180 39.645 338 181 10 3 326 1 329 3.99e-75 234
MS.gene009691.t1 AT5G64120 41.000 300 160 6 34 326 39 328 6.65e-75 233
MS.gene009691.t1 AT2G41480 39.403 335 178 9 8 326 3 328 8.34e-74 231
MS.gene009691.t1 AT3G21770 40.823 316 172 7 19 325 18 327 3.47e-73 229
MS.gene009691.t1 AT5G14130 39.937 318 177 5 17 326 19 330 3.16e-72 227
MS.gene009691.t1 AT5G14130 39.937 318 177 5 17 326 60 371 7.01e-72 227
MS.gene009691.t1 AT1G05240 40.264 303 164 6 30 322 26 321 8.86e-72 225
MS.gene009691.t1 AT1G05250 40.264 303 164 6 30 322 26 321 8.86e-72 225
MS.gene009691.t1 AT5G40150 39.739 307 169 6 28 326 30 328 1.09e-71 225
MS.gene009691.t1 AT1G30870 42.997 307 153 6 30 326 51 345 2.72e-71 225
MS.gene009691.t1 AT5G42180 40.063 317 174 7 15 324 8 315 3.69e-71 224
MS.gene009691.t1 AT4G26010 38.629 321 185 6 5 323 24 334 1.19e-70 223
MS.gene009691.t1 AT4G26010 39.355 310 176 6 16 323 7 306 1.23e-70 222
MS.gene009691.t1 AT3G28200 38.889 306 172 6 28 326 19 316 5.00e-70 221
MS.gene009691.t1 AT5G47000 40.968 310 174 5 22 326 25 330 1.30e-69 220
MS.gene009691.t1 AT2G35380 48.571 245 115 3 92 326 4 247 1.50e-69 217
MS.gene009691.t1 AT5G39580 40.123 324 176 7 11 326 6 319 1.90e-68 217
MS.gene009691.t1 AT4G33870 34.670 349 185 6 18 325 54 400 2.62e-68 219
MS.gene009691.t1 AT1G77100 38.650 326 185 9 8 326 2 319 2.62e-67 214
MS.gene009691.t1 AT2G24800 39.228 311 167 5 28 326 29 329 4.25e-67 214
MS.gene009691.t1 AT4G17690 40.864 301 170 5 30 326 26 322 7.76e-67 213
MS.gene009691.t1 AT1G34510 39.172 314 175 7 17 326 8 309 1.29e-66 212
MS.gene009691.t1 AT5G67400 40.323 310 167 7 25 322 22 325 8.86e-66 210
MS.gene009691.t1 AT5G64110 39.879 331 171 7 14 326 10 330 9.72e-66 210
MS.gene009691.t1 AT4G37530 41.905 315 159 9 23 322 20 325 1.90e-65 209
MS.gene009691.t1 AT2G18980 39.329 328 177 8 11 326 6 323 3.71e-65 208
MS.gene009691.t1 AT4G31760 37.107 318 188 5 15 326 15 326 9.90e-64 205
MS.gene009691.t1 AT5G64100 39.474 304 162 6 33 326 40 331 1.77e-63 204
MS.gene009691.t1 AT4G37520 41.368 307 162 8 28 322 25 325 5.41e-63 203
MS.gene009691.t1 AT4G25980 35.693 339 192 8 1 326 1 326 1.64e-62 202
MS.gene009691.t1 AT1G24110 37.771 323 186 6 15 326 4 322 2.05e-62 201
MS.gene009691.t1 AT3G49960 38.199 322 179 8 13 322 12 325 1.17e-61 199
MS.gene009691.t1 AT4G37520 40.196 306 164 7 28 322 25 322 1.26e-61 199
MS.gene009691.t1 AT4G30170 40.193 311 164 8 28 326 25 325 1.79e-61 199
MS.gene009691.t1 AT2G34060 39.739 307 169 7 29 323 41 343 6.02e-61 198
MS.gene009691.t1 AT4G21960 37.793 299 182 3 30 326 31 327 1.04e-58 192
MS.gene009691.t1 AT2G37130 35.556 315 186 8 20 326 22 327 4.00e-56 185
MS.gene009691.t1 AT2G39040 38.511 309 176 7 29 326 45 350 1.02e-55 185
MS.gene009691.t1 AT4G37530 43.284 268 128 9 23 275 20 278 1.18e-55 182
MS.gene009691.t1 AT2G37130 35.762 302 179 7 33 326 2 296 1.79e-55 182
MS.gene009691.t1 AT5G22410 36.119 335 189 10 1 323 1 322 2.34e-55 183
MS.gene009691.t1 AT5G24070 38.603 272 151 5 64 326 71 335 1.03e-54 182
MS.gene009691.t1 AT2G43480 34.700 317 189 6 21 326 26 335 4.29e-53 177
MS.gene009691.t1 AT3G17070 31.804 327 207 6 14 326 15 339 2.13e-48 166
MS.gene009691.t1 AT5G39580 40.271 221 122 4 11 231 6 216 2.91e-43 149
MS.gene009691.t1 AT2G24800 41.379 203 109 4 28 229 29 222 6.27e-43 148
MS.gene009691.t1 AT4G25980 41.143 175 98 3 24 198 65 234 2.91e-40 143
MS.gene009691.t1 AT3G17070 31.298 262 170 5 72 326 18 276 5.60e-35 129
MS.gene009691.t1 AT4G32320 30.038 263 109 7 64 308 117 322 4.05e-19 87.0
MS.gene009691.t1 AT1G77490 27.863 262 142 10 64 307 106 338 3.31e-13 70.5
MS.gene009691.t1 AT1G77490 27.863 262 142 10 64 307 106 338 3.81e-13 70.1
MS.gene009691.t1 AT3G42570 30.508 118 80 1 83 198 32 149 9.01e-13 65.5

Find 64 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCCAGGTTTCCTTTAAT+TGG 0.214761 5.2:-62879615 None:intergenic
CAAGAATCTCATCAACAAAA+AGG 0.247712 5.2:+62879415 MS.gene009691:CDS
TGCAGCTTGGAGGGCCATTT+TGG 0.267352 5.2:+62878398 MS.gene009691:intron
CCAAGTTTAACCTTCCAAAA+TGG 0.296962 5.2:-62878412 None:intergenic
TGTAGTATAAGTTATCAAAA+TGG 0.316765 5.2:-62879394 None:intergenic
AAGGACATGGTGGCCTTATC+TGG 0.324620 5.2:+62878550 MS.gene009691:CDS
TTGCTTCCTAATCTCACCTT+TGG 0.333452 5.2:-62879582 None:intergenic
AATGCAGGAGAGCCAATTAA+AGG 0.356166 5.2:+62879603 MS.gene009691:CDS
GGAAATAACAATCCTCTTAC+CGG 0.368033 5.2:+62879557 MS.gene009691:CDS
TATTGATGCCATAAAATCTA+AGG 0.377388 5.2:+62877444 MS.gene009691:CDS
CCCTTAGCAACCTTATCAAT+AGG 0.384569 5.2:+62878503 MS.gene009691:CDS
AGTCTTCTCTCCTTTATTAG+AGG 0.384702 5.2:-62877383 None:intergenic
AAGGTTGCTAAGGGTAGAAA+AGG 0.387632 5.2:-62878494 None:intergenic
TGCTACTGCAATGATTAAGA+TGG 0.388563 5.2:+62879535 MS.gene009691:CDS
GAGCTTTAAACCTATTGATA+AGG 0.399870 5.2:-62878513 None:intergenic
TGGAGGGTCTACTGATTCAT+TGG 0.405972 5.2:+62879469 MS.gene009691:CDS
GATGACACACCCTCTAATAA+AGG 0.415165 5.2:+62877373 MS.gene009691:CDS
ACCTATTGATAAGGTTGCTA+AGG 0.417064 5.2:-62878504 None:intergenic
TCACCTTTGGATCCGGTAAG+AGG 0.424240 5.2:-62879569 None:intergenic
ACCTCTCAAAGAATCTTTGT+TGG 0.427591 5.2:-62877413 None:intergenic
CCTAATCTCACCTTTGGATC+CGG 0.432355 5.2:-62879576 None:intergenic
CCTCTCAAAGAATCTTTGTT+GGG 0.433102 5.2:-62877412 None:intergenic
TTCTTAGGAGCTCACACAAT+TGG 0.437641 5.2:+62879221 MS.gene009691:intron
GGAAGGTTAAACTTGGAAGA+AGG 0.441433 5.2:+62878419 MS.gene009691:CDS
GTCTTCTCTCCTTTATTAGA+GGG 0.447683 5.2:-62877382 None:intergenic
CCGGATCCAAAGGTGAGATT+AGG 0.455777 5.2:+62879576 MS.gene009691:CDS
GAAGGTTAAACTTGGAAGAA+GGG 0.455829 5.2:+62878420 MS.gene009691:CDS
GTAAATACGATCTCTATAAA+CGG 0.464729 5.2:-62879258 None:intergenic
TATAAGTTATCAAAATGGTT+TGG 0.466239 5.2:-62879389 None:intergenic
ATCAATAGGTTTAAAGCTCA+AGG 0.476560 5.2:+62878517 MS.gene009691:CDS
ACAATTCCTCTGCCTTGACT+TGG 0.477817 5.2:-62879309 None:intergenic
ACTGTTTGCATCATTGAGGC+TGG 0.487052 5.2:-62878455 None:intergenic
GCTACTGCAATGATTAAGAT+GGG 0.493974 5.2:+62879536 MS.gene009691:CDS
CCCAACAAAGATTCTTTGAG+AGG 0.507682 5.2:+62877412 MS.gene009691:CDS
GTGAGATTAGGAAGCAATGC+AGG 0.517002 5.2:+62879588 MS.gene009691:CDS
TCAGCACATGAGACCACACC+GGG 0.520500 5.2:-62877481 None:intergenic
CACCACTGTTTGCATCATTG+AGG 0.529112 5.2:-62878459 None:intergenic
AGCTCAAGGACTCTCTACTA+AGG 0.542515 5.2:+62878531 MS.gene009691:CDS
CCTATTGATAAGGTTGCTAA+GGG 0.554792 5.2:-62878503 None:intergenic
AACAGAATCACGAGCAGCAA+TGG 0.556484 5.2:-62877512 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.559330 5.2:-62879442 None:intergenic
ATAGTTTATTTGCCAAGTCA+AGG 0.563167 5.2:+62879297 MS.gene009691:CDS
AGGAATTGTCCAAGGAAAAG+TGG 0.565194 5.2:+62879323 MS.gene009691:CDS
AGGTTGCTAAGGGTAGAAAA+GGG 0.568432 5.2:-62878493 None:intergenic
CTAAGGGTAGAAAAGGGAGG+TGG 0.578099 5.2:-62878487 None:intergenic
AATCCTCTTACCGGATCCAA+AGG 0.590917 5.2:+62879566 MS.gene009691:CDS
TATTTGCCAAGTCAAGGCAG+AGG 0.591700 5.2:+62879303 MS.gene009691:CDS
TGATGCCATAAAATCTAAGG+TGG 0.613715 5.2:+62877447 MS.gene009691:CDS
CAAGGCAGAGGAATTGTCCA+AGG 0.617740 5.2:+62879315 MS.gene009691:CDS
GTCGCTAGAGAACCTCGCAT+GGG 0.619429 5.2:+62875677 MS.gene009691:CDS
TTGCTAAGGGTAGAAAAGGG+AGG 0.621073 5.2:-62878490 None:intergenic
TGTCGCTAGAGAACCTCGCA+TGG 0.621286 5.2:+62875676 MS.gene009691:CDS
GCTAGAGAACCTCGCATGGG+AGG 0.623031 5.2:+62875680 MS.gene009691:CDS
CTCACACAATTGGAAAAGCA+AGG 0.632448 5.2:+62879231 MS.gene009691:CDS
AAGGTGGAGTCAGTATGCCC+CGG 0.648777 5.2:+62877463 MS.gene009691:CDS
AGGAGAGATCCTCCCATGCG+AGG 0.655274 5.2:-62875689 None:intergenic
GGAGTCAGTATGCCCCGGTG+TGG 0.661070 5.2:+62877468 MS.gene009691:CDS
ATCAGCACATGAGACCACAC+CGG 0.662563 5.2:-62877482 None:intergenic
AGGACTCTCTACTAAGGACA+TGG 0.666154 5.2:+62878537 MS.gene009691:CDS
AGTCATGAAAATGAAGACGA+AGG 0.684805 5.2:-62875709 None:intergenic
AGCCTCAATGATGCAAACAG+TGG 0.715380 5.2:+62878457 MS.gene009691:CDS
ACTCTCTACTAAGGACATGG+TGG 0.722310 5.2:+62878540 MS.gene009691:CDS
AGCGACAGCAGAGTGAACAA+CGG 0.726357 5.2:-62875660 None:intergenic
CAGCACATGAGACCACACCG+GGG 0.839989 5.2:-62877480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATACATTTAATTAT+TGG + chr5.2:62878802-62878821 MS.gene009691:intron 10.0%
!! AATTTATTAGATAAAGATTA+AGG - chr5.2:62876830-62876849 None:intergenic 10.0%
!! ATTTATTAGATAAAGATTAA+GGG - chr5.2:62876829-62876848 None:intergenic 10.0%
!! TAATAATTGTATCATAATAA+TGG - chr5.2:62878627-62878646 None:intergenic 10.0%
!! TAATCTTTATCTAATAAATT+TGG + chr5.2:62876830-62876849 MS.gene009691:intron 10.0%
!!! AAAATCAATATGTTTTTTTT+TGG + chr5.2:62877549-62877568 MS.gene009691:intron 10.0%
!!! AAAGTTTTTTTTTTTTTTGA+AGG - chr5.2:62877661-62877680 None:intergenic 10.0%
!!! AATAATTAAATGTATTTTCT+TGG - chr5.2:62878803-62878822 None:intergenic 10.0%
!!! AGATTGAATATATTATTTTT+TGG + chr5.2:62876320-62876339 MS.gene009691:intron 10.0%
!! AAAAATTACTAAATTTGTGT+CGG + chr5.2:62876653-62876672 MS.gene009691:intron 15.0%
!! AATTTAGTACATATTCAAAT+AGG - chr5.2:62876704-62876723 None:intergenic 15.0%
!! ATGTTTAAATTAGATACAAT+AGG - chr5.2:62878589-62878608 None:intergenic 15.0%
!! TGTTGAAAATGAAATTTAAA+CGG - chr5.2:62878871-62878890 None:intergenic 15.0%
!! TTGGTTACTAAATAATAATA+TGG - chr5.2:62876251-62876270 None:intergenic 15.0%
!! TTTATTAGATAAAGATTAAG+GGG - chr5.2:62876828-62876847 None:intergenic 15.0%
!!! ACACAAATTTAGTAATTTTT+TGG - chr5.2:62876653-62876672 None:intergenic 15.0%
!!! TTTATTGAAGAGATTTTTAA+TGG + chr5.2:62877848-62877867 MS.gene009691:intron 15.0%
!! AATATGTACTAAATTATGCA+TGG + chr5.2:62876709-62876728 MS.gene009691:intron 20.0%
!! AATATTGAGTGAATTGAATA+GGG + chr5.2:62876377-62876396 MS.gene009691:intron 20.0%
!! ATTATCTGATATGCTAAATA+TGG - chr5.2:62877187-62877206 None:intergenic 20.0%
!! TAACGAGAAAAATTTAGATT+AGG + chr5.2:62876107-62876126 MS.gene009691:intron 20.0%
!! TAATATTGAGTGAATTGAAT+AGG + chr5.2:62876376-62876395 MS.gene009691:intron 20.0%
!! TATAAGTTATCAAAATGGTT+TGG - chr5.2:62879392-62879411 None:intergenic 20.0%
!! TGTAGTATAAGTTATCAAAA+TGG - chr5.2:62879397-62879416 None:intergenic 20.0%
!! TTATTAGAAGAAAAGAAATG+AGG - chr5.2:62878318-62878337 None:intergenic 20.0%
!! TTGTTGTCAAACTAAAAAAA+TGG + chr5.2:62878261-62878280 MS.gene009691:intron 20.0%
!!! AAATCACTTTTTTCTAAACA+GGG + chr5.2:62877328-62877347 MS.gene009691:intron 20.0%
!!! ACTTTTAAATTCTTGAGATA+GGG + chr5.2:62876738-62876757 MS.gene009691:intron 20.0%
!!! AGAAATTTCTTTTAGAAACA+TGG + chr5.2:62876862-62876881 MS.gene009691:intron 20.0%
!!! ATTAAATGTATTTTCTTGGT+TGG - chr5.2:62878799-62878818 None:intergenic 20.0%
!!! GTTACTATTCATTTTAACTT+TGG - chr5.2:62878847-62878866 None:intergenic 20.0%
!!! TAAATCACTTTTTTCTAAAC+AGG + chr5.2:62877327-62877346 MS.gene009691:intron 20.0%
!!! TACTTTTAAATTCTTGAGAT+AGG + chr5.2:62876737-62876756 MS.gene009691:intron 20.0%
!!! TGTTCATGTTTTTTCTTATA+GGG + chr5.2:62875567-62875586 MS.gene009691:CDS 20.0%
!!! TTGTTCATGTTTTTTCTTAT+AGG + chr5.2:62875566-62875585 MS.gene009691:CDS 20.0%
! AAGAATCTCATCAACAAAAA+GGG + chr5.2:62879416-62879435 MS.gene009691:CDS 25.0%
! AGTTATGTTTAGCAAAATCA+AGG - chr5.2:62878167-62878186 None:intergenic 25.0%
! ATAATTTCGAAGAATCTGTT+TGG + chr5.2:62878060-62878079 MS.gene009691:intron 25.0%
! GTAAATACGATCTCTATAAA+CGG - chr5.2:62879261-62879280 None:intergenic 25.0%
! TACTAGAACAAAACGAAAAT+TGG - chr5.2:62877968-62877987 None:intergenic 25.0%
! TATTGATGCCATAAAATCTA+AGG + chr5.2:62877444-62877463 MS.gene009691:CDS 25.0%
! TTAGTAGTTGATCATAGTAA+TGG - chr5.2:62875923-62875942 None:intergenic 25.0%
! TTTACAGCCTTAAAAACATT+GGG - chr5.2:62875638-62875657 None:intergenic 25.0%
!! AATATGTGCATATAACTTGT+TGG - chr5.2:62877820-62877839 None:intergenic 25.0%
!! ACTTCATAAACATAGGATTT+TGG + chr5.2:62877289-62877308 MS.gene009691:intron 25.0%
!! AGTGTTATGTAAGTTGAATT+TGG - chr5.2:62879000-62879019 None:intergenic 25.0%
!! ATGTTTAAAGTAAAGAACGT+CGG - chr5.2:62877086-62877105 None:intergenic 25.0%
!! CCTATGTTTATGAAGTTTTA+GGG - chr5.2:62877285-62877304 None:intergenic 25.0%
!! TCCTATGTTTATGAAGTTTT+AGG - chr5.2:62877286-62877305 None:intergenic 25.0%
!! TTCTATTATATTTTGCAGCT+TGG + chr5.2:62878385-62878404 MS.gene009691:intron 25.0%
!!! AACAACAGTACTTTTTTTAG+AGG + chr5.2:62876906-62876925 MS.gene009691:intron 25.0%
!!! ACAACAGTACTTTTTTTAGA+GGG + chr5.2:62876907-62876926 MS.gene009691:intron 25.0%
AAAAAGACATGTACCAGATA+AGG - chr5.2:62878566-62878585 None:intergenic 30.0%
AAATTACGCCAAAATTATCG+AGG - chr5.2:62876175-62876194 None:intergenic 30.0%
ACGACATCAAAAAATTACAG+GGG - chr5.2:62876781-62876800 None:intergenic 30.0%
ACGCATGTCTAAATAATATG+AGG - chr5.2:62877112-62877131 None:intergenic 30.0%
AGTAACCAATTGTTCATATG+AGG + chr5.2:62876262-62876281 MS.gene009691:intron 30.0%
ATAGTTTATTTGCCAAGTCA+AGG + chr5.2:62879297-62879316 MS.gene009691:CDS 30.0%
ATTCACTCAATATTACTCAC+TGG - chr5.2:62876371-62876390 None:intergenic 30.0%
CAAGAATCTCATCAACAAAA+AGG + chr5.2:62879415-62879434 MS.gene009691:CDS 30.0%
CACGACATCAAAAAATTACA+GGG - chr5.2:62876782-62876801 None:intergenic 30.0%
CATCATCATTAAATTCGTGA+CGG - chr5.2:62875997-62876016 None:intergenic 30.0%
CCCTAAAACTTCATAAACAT+AGG + chr5.2:62877282-62877301 MS.gene009691:intron 30.0%
GAAATCCTCATATGAACAAT+TGG - chr5.2:62876270-62876289 None:intergenic 30.0%
GAGTGAGAAGTTATAATTCT+TGG + chr5.2:62878117-62878136 MS.gene009691:intron 30.0%
GTTTACAGCCTTAAAAACAT+TGG - chr5.2:62875639-62875658 None:intergenic 30.0%
TCACGACATCAAAAAATTAC+AGG - chr5.2:62876783-62876802 None:intergenic 30.0%
TGACGTAACTATTGCAATAA+TGG + chr5.2:62876489-62876508 MS.gene009691:intron 30.0%
TGCTTGATATATCACACATT+TGG + chr5.2:62878657-62878676 MS.gene009691:intron 30.0%
TTTAGATTATCAGACCATCA+AGG - chr5.2:62879068-62879087 None:intergenic 30.0%
! ATCAATAGGTTTAAAGCTCA+AGG + chr5.2:62878517-62878536 MS.gene009691:CDS 30.0%
! ATTATATTTTGCAGCTTGGA+GGG + chr5.2:62878389-62878408 MS.gene009691:intron 30.0%
! CATTTCTTCCTCGATAATTT+TGG + chr5.2:62876164-62876183 MS.gene009691:intron 30.0%
! CATTTTCGCTTAATATCGAA+GGG - chr5.2:62879043-62879062 None:intergenic 30.0%
! TACTTTTCCTATCTCTTTCA+AGG + chr5.2:62876454-62876473 MS.gene009691:intron 30.0%
! TATTATATTTTGCAGCTTGG+AGG + chr5.2:62878388-62878407 MS.gene009691:intron 30.0%
! TGGTCTGATAATCTAAAGTT+CGG + chr5.2:62879071-62879090 MS.gene009691:intron 30.0%
! TTGTTTTCTTTGTGCTTCTT+AGG + chr5.2:62879206-62879225 MS.gene009691:intron 30.0%
!! GAGCTTTAAACCTATTGATA+AGG - chr5.2:62878516-62878535 None:intergenic 30.0%
!! TTTATTGTACCACTTTTCCT+TGG - chr5.2:62879335-62879354 None:intergenic 30.0%
!!! CAACAGTACTTTTTTTAGAG+GGG + chr5.2:62876908-62876927 MS.gene009691:intron 30.0%
AAAGCTCTTGATCAGAATGA+AGG - chr5.2:62879445-62879464 None:intergenic 35.0%
ACCTATTGATAAGGTTGCTA+AGG - chr5.2:62878507-62878526 None:intergenic 35.0%
ACCTCTCAAAGAATCTTTGT+TGG - chr5.2:62877416-62877435 None:intergenic 35.0%
ACGTACATCAAGCTTCAAAA+AGG - chr5.2:62877036-62877055 None:intergenic 35.0%
AGTCATGAAAATGAAGACGA+AGG - chr5.2:62875712-62875731 None:intergenic 35.0%
AGTCTTCTCTCCTTTATTAG+AGG - chr5.2:62877386-62877405 None:intergenic 35.0%
ATATTCTCACCAACCTATGT+TGG - chr5.2:62876614-62876633 None:intergenic 35.0%
ATGTAAAGAGACTGTAGACT+TGG + chr5.2:62877757-62877776 MS.gene009691:intron 35.0%
CCAAGTTTAACCTTCCAAAA+TGG - chr5.2:62878415-62878434 None:intergenic 35.0%
CCTATTGATAAGGTTGCTAA+GGG - chr5.2:62878506-62878525 None:intergenic 35.0%
CCTCTCAAAGAATCTTTGTT+GGG - chr5.2:62877415-62877434 None:intergenic 35.0%
CCTTCGATATTAAGCGAAAA+TGG + chr5.2:62879041-62879060 MS.gene009691:intron 35.0%
GAAGGTTAAACTTGGAAGAA+GGG + chr5.2:62878420-62878439 MS.gene009691:CDS 35.0%
GCTACTGCAATGATTAAGAT+GGG + chr5.2:62879536-62879555 MS.gene009691:CDS 35.0%
GGAAATAACAATCCTCTTAC+CGG + chr5.2:62879557-62879576 MS.gene009691:CDS 35.0%
GTATGTATATGTGTGTGTGT+GGG + chr5.2:62875859-62875878 MS.gene009691:intron 35.0%
GTCTTCTCTCCTTTATTAGA+GGG - chr5.2:62877385-62877404 None:intergenic 35.0%
TAAGACTCCTTGAAAGAGAT+AGG - chr5.2:62876464-62876483 None:intergenic 35.0%
TATCACACATTTGGTTGACT+AGG + chr5.2:62878666-62878685 MS.gene009691:intron 35.0%
TATTCTCACCAACCTATGTT+GGG - chr5.2:62876613-62876632 None:intergenic 35.0%
TCTACAGTCTCTTTACATCA+AGG - chr5.2:62877755-62877774 None:intergenic 35.0%
TGATGCCATAAAATCTAAGG+TGG + chr5.2:62877447-62877466 MS.gene009691:CDS 35.0%
TGCTACTGCAATGATTAAGA+TGG + chr5.2:62879535-62879554 MS.gene009691:CDS 35.0%
TGTATGTATATGTGTGTGTG+TGG + chr5.2:62875858-62875877 MS.gene009691:intron 35.0%
! ATCAAGAGCTTTTCAATGGA+GGG + chr5.2:62879453-62879472 MS.gene009691:CDS 35.0%
! CCATTTTCGCTTAATATCGA+AGG - chr5.2:62879044-62879063 None:intergenic 35.0%
! CGCAAGTGATTAATGAGTTT+TGG - chr5.2:62879177-62879196 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+TGG + chr5.2:62879449-62879468 MS.gene009691:CDS 35.0%
! TGACTCCACCTTAGATTTTA+TGG - chr5.2:62877455-62877474 None:intergenic 35.0%
! TTTTCTAAACAGGGTTGTGA+TGG + chr5.2:62877337-62877356 MS.gene009691:intron 35.0%
!! CCATTTTGGAAGGTTAAACT+TGG + chr5.2:62878412-62878431 MS.gene009691:CDS 35.0%
!! GAAGTGTCCCAATGTTTTTA+AGG + chr5.2:62875628-62875647 MS.gene009691:CDS 35.0%
!!! CTTGAGATAGGGTGTTTTTT+TGG + chr5.2:62876749-62876768 MS.gene009691:intron 35.0%
!!! TGAAGTTTTAGGGCAATGAT+AGG - chr5.2:62877275-62877294 None:intergenic 35.0%
AAATCGCTCTCAAAGATGAG+TGG - chr5.2:62876582-62876601 None:intergenic 40.0%
AAATTTAGACCGTGTGCATG+TGG + chr5.2:62877147-62877166 MS.gene009691:intron 40.0%
AAGGTTGCTAAGGGTAGAAA+AGG - chr5.2:62878497-62878516 None:intergenic 40.0%
AGCATGACATGAAGTTTACG+TGG - chr5.2:62878709-62878728 None:intergenic 40.0%
AGGAATTGTCCAAGGAAAAG+TGG + chr5.2:62879323-62879342 MS.gene009691:CDS 40.0%
AGGGCAATGATAGGTAAACA+AGG - chr5.2:62877266-62877285 None:intergenic 40.0%
AGGTTGCTAAGGGTAGAAAA+GGG - chr5.2:62878496-62878515 None:intergenic 40.0%
ATTCTCACCAACCTATGTTG+GGG - chr5.2:62876612-62876631 None:intergenic 40.0%
ATTTACCATGTCCCCAACAT+AGG + chr5.2:62876598-62876617 MS.gene009691:intron 40.0%
CCCAACAAAGATTCTTTGAG+AGG + chr5.2:62877412-62877431 MS.gene009691:CDS 40.0%
CCCTTAGCAACCTTATCAAT+AGG + chr5.2:62878503-62878522 MS.gene009691:CDS 40.0%
CTCACACAATTGGAAAAGCA+AGG + chr5.2:62879231-62879250 MS.gene009691:CDS 40.0%
GATGACACACCCTCTAATAA+AGG + chr5.2:62877373-62877392 MS.gene009691:CDS 40.0%
GGAAGGTTAAACTTGGAAGA+AGG + chr5.2:62878419-62878438 MS.gene009691:CDS 40.0%
TAAGCGAAAATGGACCTTGA+TGG + chr5.2:62879051-62879070 MS.gene009691:intron 40.0%
TTCTTAGGAGCTCACACAAT+TGG + chr5.2:62879221-62879240 MS.gene009691:intron 40.0%
TTGCTTCCTAATCTCACCTT+TGG - chr5.2:62879585-62879604 None:intergenic 40.0%
TTTGTAAAGCCACATGCACA+CGG - chr5.2:62877159-62877178 None:intergenic 40.0%
! GATCAAGAGCTTTTCAATGG+AGG + chr5.2:62879452-62879471 MS.gene009691:CDS 40.0%
! TCTTGGCTTTCTTGTTGACA+TGG + chr5.2:62878134-62878153 MS.gene009691:intron 40.0%
! TTTTCATGTCGTTACGCTAC+TGG + chr5.2:62876410-62876429 MS.gene009691:intron 40.0%
!! GAATCTGTTTGGTTTGACGA+TGG + chr5.2:62878071-62878090 MS.gene009691:intron 40.0%
!!! GGTTTGGTGTTTTGAAGTCT+AGG - chr5.2:62879376-62879395 None:intergenic 40.0%
AACAGAATCACGAGCAGCAA+TGG - chr5.2:62877515-62877534 None:intergenic 45.0%
AATCCTCTTACCGGATCCAA+AGG + chr5.2:62879566-62879585 MS.gene009691:CDS 45.0%
ACAATTCCTCTGCCTTGACT+TGG - chr5.2:62879312-62879331 None:intergenic 45.0%
ACTCTCTACTAAGGACATGG+TGG + chr5.2:62878540-62878559 MS.gene009691:CDS 45.0%
ACTGTTTGCATCATTGAGGC+TGG - chr5.2:62878458-62878477 None:intergenic 45.0%
AGCCTCAATGATGCAAACAG+TGG + chr5.2:62878457-62878476 MS.gene009691:CDS 45.0%
AGCTCAAGGACTCTCTACTA+AGG + chr5.2:62878531-62878550 MS.gene009691:CDS 45.0%
AGGACTCTCTACTAAGGACA+TGG + chr5.2:62878537-62878556 MS.gene009691:CDS 45.0%
CACCACTGTTTGCATCATTG+AGG - chr5.2:62878462-62878481 None:intergenic 45.0%
CCTAATCTCACCTTTGGATC+CGG - chr5.2:62879579-62879598 None:intergenic 45.0%
GACTGTAGACTTGGATGAAG+TGG + chr5.2:62877766-62877785 MS.gene009691:intron 45.0%
GTGAGATTAGGAAGCAATGC+AGG + chr5.2:62879588-62879607 MS.gene009691:CDS 45.0%
TATTTGCCAAGTCAAGGCAG+AGG + chr5.2:62879303-62879322 MS.gene009691:CDS 45.0%
TTGCTAAGGGTAGAAAAGGG+AGG - chr5.2:62878493-62878512 None:intergenic 45.0%
!! GTACTCTGACTCTAGAGTCT+TGG + chr5.2:62878895-62878914 MS.gene009691:intron 45.0%
!! TGGAGGGTCTACTGATTCAT+TGG + chr5.2:62879469-62879488 MS.gene009691:CDS 45.0%
ACCAACCTATGTTGGGGACA+TGG - chr5.2:62876606-62876625 None:intergenic 50.0%
ACCATGTCCCCAACATAGGT+TGG + chr5.2:62876602-62876621 MS.gene009691:intron 50.0%
AGCGACAGCAGAGTGAACAA+CGG - chr5.2:62875663-62875682 None:intergenic 50.0%
ATCAGCACATGAGACCACAC+CGG - chr5.2:62877485-62877504 None:intergenic 50.0%
CAAGGCAGAGGAATTGTCCA+AGG + chr5.2:62879315-62879334 MS.gene009691:CDS 50.0%
CCGGATCCAAAGGTGAGATT+AGG + chr5.2:62879576-62879595 MS.gene009691:CDS 50.0%
CTAAGGGTAGAAAAGGGAGG+TGG - chr5.2:62878490-62878509 None:intergenic 50.0%
GGCATGACATGCAATGTACG+TGG - chr5.2:62877947-62877966 None:intergenic 50.0%
TCACCTTTGGATCCGGTAAG+AGG - chr5.2:62879572-62879591 None:intergenic 50.0%
!! AAGGACATGGTGGCCTTATC+TGG + chr5.2:62878550-62878569 MS.gene009691:CDS 50.0%
AAGGTGGAGTCAGTATGCCC+CGG + chr5.2:62877463-62877482 MS.gene009691:CDS 55.0%
GTCGCTAGAGAACCTCGCAT+GGG + chr5.2:62875677-62875696 MS.gene009691:CDS 55.0%
TCAGCACATGAGACCACACC+GGG - chr5.2:62877484-62877503 None:intergenic 55.0%
TGTCGCTAGAGAACCTCGCA+TGG + chr5.2:62875676-62875695 MS.gene009691:CDS 55.0%
! TGCAGCTTGGAGGGCCATTT+TGG + chr5.2:62878398-62878417 MS.gene009691:intron 55.0%
!! GCTTGGAGGGCCATTTTGGA+AGG + chr5.2:62878402-62878421 MS.gene009691:intron 55.0%
AGGAGAGATCCTCCCATGCG+AGG - chr5.2:62875692-62875711 None:intergenic 60.0%
CAGCACATGAGACCACACCG+GGG - chr5.2:62877483-62877502 None:intergenic 60.0%
GCTAGAGAACCTCGCATGGG+AGG + chr5.2:62875680-62875699 MS.gene009691:CDS 60.0%
GGAGTCAGTATGCCCCGGTG+TGG + chr5.2:62877468-62877487 MS.gene009691:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 62875518 62879622 62875518 ID=MS.gene009691
chr5.2 mRNA 62875518 62879622 62875518 ID=MS.gene009691.t1;Parent=MS.gene009691
chr5.2 exon 62875518 62875742 62875518 ID=MS.gene009691.t1.exon1;Parent=MS.gene009691.t1
chr5.2 CDS 62875518 62875742 62875518 ID=cds.MS.gene009691.t1;Parent=MS.gene009691.t1
chr5.2 exon 62877349 62877540 62877349 ID=MS.gene009691.t1.exon2;Parent=MS.gene009691.t1
chr5.2 CDS 62877349 62877540 62877349 ID=cds.MS.gene009691.t1;Parent=MS.gene009691.t1
chr5.2 exon 62878403 62878571 62878403 ID=MS.gene009691.t1.exon3;Parent=MS.gene009691.t1
chr5.2 CDS 62878403 62878571 62878403 ID=cds.MS.gene009691.t1;Parent=MS.gene009691.t1
chr5.2 exon 62879228 62879622 62879228 ID=MS.gene009691.t1.exon4;Parent=MS.gene009691.t1
chr5.2 CDS 62879228 62879622 62879228 ID=cds.MS.gene009691.t1;Parent=MS.gene009691.t1
Gene Sequence

>MS.gene009691

ATGGCACTTTCTTCTTCTAAAGTTTCACTAAACTTTTTTTGCTTTGTTTTGTTCATGTTTTTTCTTATAGGGAGTTCTTTTTCTCAACTATCTGAAAATTTCTATGCTAAGAAGTGTCCCAATGTTTTTAAGGCTGTAAACTCCGTTGTTCACTCTGCTGTCGCTAGAGAACCTCGCATGGGAGGATCTCTCCTTCGTCTTCATTTTCATGACTGCTTTGTCAATGTAAATAATCTTCAAACTACGTTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTATGTATATGTGTGTGTGTGGGTGTGTGTGTTTTTTTCTTTAGTTATATATTGTTATATACCATTACTATGATCAACTACTAAGAAAACTTGCTAGAGAAATCGAGAGAGAAAACATGAATATTTTCTCTAAATCCGTCACGAATTTAATGATGATGAAATTAGACAAATATTTCATTTTTTTGTCACTAATTTTTTTCTCTATTATTATTATATATCATTACTATATTATCTACTACTAATAAAACTAACGAGAAAAATTTAGATTAGGTAAATTTTGTGATGATAGTATTAGAAAGTGATTTCATTTCTTCCTCGATAATTTTGGCGTAATTTATTTTTTCTAATAGTGATATATAATCAATGTTATTATTTTTTTGACAAATAATCCATATTATTATTTAGTAACCAATTGTTCATATGAGGATTTCAAATGTGAAAATAAAAATATTAATATAGATAGATTGAATATATTATTTTTTGGTAGTTTGATAATGAGTTGAATATGACCAGTGAGTAATATTGAGTGAATTGAATAGGGTCATATACACTTTTCATGTCGTTACGCTACTGGACTATTTATACTTTATTTTTATACTTTTCCTATCTCTTTCAAGGAGTCTTATTGAGTGACGTAACTATTGCAATAATGGAACATTTCATGCATAATTGAAAAAGAAGTAAAATGAACTGTCTATTGTTTGCATGAAATATTATGCACCACTCATCTTTGAGAGCGATTTACCATGTCCCCAACATAGGTTGGTGAGAATATATTTAAAAAAAATTAGCCAAAAAATTACTAAATTTGTGTCGGTTGAATGTGAATTTTTAAACAATTTCCTATTTGAATATGTACTAAATTATGCATGGATATGTACTTTTAAATTCTTGAGATAGGGTGTTTTTTTGGCAAGTACCCCTGTAATTTTTTGATGTCGTGAGCTAAATACTCTTTGTACTTATCCCCTTAATCTTTATCTAATAAATTTGGCTGTTCAACAGAAATTTCTTTTAGAAACATGGAAGTTTTTTAATAGTAATGAAAACAACAGTACTTTTTTTAGAGGGGAAAACAACAGTACAAATTAGTCTTTTATTTCTTGTTAAAAAGATTAACTGTTTATTTGCATTGCGAATAAGAATATTCTGAACAAAAAAGTAAAAGATAAATCCTTTTTGAAGCTTGATGTACGTGTGCTAACAAATAGTTTATATTCAAGTCCGACGTTCTTTACTTTAAACATACACCTCATATTATTTAGACATGCGTTACAAACTATTTTACAAATTTAGACCGTGTGCATGTGGCTTTACAAATTCAACCATATTTAGCATATCAGATAATTTAAATGTGATTGACTACGCGCAATCGAATAATTTTAAATTGTAAACAACTCAAATCCTTGTTTACCTATCATTGCCCTAAAACTTCATAAACATAGGATTTTGGTGAACTTACTTATCATAAATCACTTTTTTCTAAACAGGGTTGTGATGGATCAGTGCTACTTGATGACACACCCTCTAATAAAGGAGAGAAGACTGCACTTCCCAACAAAGATTCTTTGAGAGGTTTTGAAGTTATTGATGCCATAAAATCTAAGGTGGAGTCAGTATGCCCCGGTGTGGTCTCATGTGCTGATATCTTAGCCATTGCTGCTCGTGATTCTGTTGTAAATGTGAGTACAAAATCAATATGTTTTTTTTTGGTACATCAAAATCAATATGTTAAACACTGAATTTTTAATAATTTTTCAAATATAAATTCACTACTAGAAGAACTTTAATAATCAATTCCTTCAAAAAAAAAAAAAACTTTAATAATCAACAAAAGTTAGAGACAGCAGAAAATTAACAGCAAAAACTATAAAATATTGAAATTCAGAGCAGCCTTGATGTAAAGAGACTGTAGACTTGGATGAAGTGGAATTTGATAGTTGCATAAATTATATTATCCAACAAGTTATATGCACATATTAGTTTATTTTTATTGAAGAGATTTTTAATGGAATAGTCATAGAAACAAAGTTATATCATATATTTACAATAATAAAATATAGATCAAGTGTGACGTTTAAACAACCACGTACATTGCATGTCATGCCAATTTTCGTTTTGTTCTAGTAAGTGACTTTAAATATAAAAGACACACACATATTTATGAATTAATTATTGCTTAACAATAATTTATACTAATAATAATTTCGAAGAATCTGTTTGGTTTGACGATGGAAGTGTCAACATGACGTTTAAACGAGTGAGAAGTTATAATTCTTGGCTTTCTTGTTGACATGGTTTTCTGCCTTGATTTTGCTAAACATAACTTTTTACATAAAATATACAAGCTAAATAATGATACATATAGATGCTTAATTAATCTAATACTCATTTTTTTGTTGTTGTTGTCAAACTAAAAAAATGGTATAATATATAATTTATAAAAATTTAAAAATCCTCATTTCTTTTCTTCTAATAAATGCTTATATTTTCATTCTATCATATTAGTTTTTAAATTTTTTTTTATTCTATTATATTTTGCAGCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCCAGCCTCAATGATGCAAACAGTGGTGTAATTCCACCTCCCTTTTCTACCCTTAGCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTGGCCTTATCTGGTACATGTCTTTTTCCTATTGTATCTAATTTAAACATTTTTTCTTCTAACTTCCATTATTATGATACAATTATTAGTTTTTATTTTGCTTGATATATCACACATTTGGTTGACTAGGATGTGATGTTTAAACAACCACGTAAACTTCATGTCATGCTTAATTTTCGTTTTGTTCTAAGTGACTTCTAATAAAAAAAAGAACAATGACACAAAAAACATGTTTATCCAACCAAGAAAATACATTTAATTATTGGTTATGTTTGAATAATATTTCCAAAGTTAAAATGAATAGTAACACCGTTTAAATTTCATTTTCAACACTTAGTACTCTGACTCTAGAGTCTTGGAATATACAAATTCAACTTACATAGCACTATTGATTAATAAATCTAAATATTATTTGAACATTAAGAAATTATTCAAGTGCCAAATTCAACTTACATAACACTATTTATTTTTTTAGTTTCAACCCTTCGATATTAAGCGAAAATGGACCTTGATGGTCTGATAATCTAAAGTTCGGTCTGAATATAAGTAAAATCTTATTAAAGATTGTCTCAAACATAATTCAAATTCGAATTCTCTTGAATGATTCGTTACGAACCAAAACTCATTAATCACTTGCGTCTAACTATTTGTTTTCTTTGTGCTTCTTAGGAGCTCACACAATTGGAAAAGCAAGGTGTACCGTTTATAGAGATCGTATTTACAATGATACAAATATTGATAGTTTATTTGCCAAGTCAAGGCAGAGGAATTGTCCAAGGAAAAGTGGTACAATAAAAGACAACAATGTAGCTGTCCTAGACTTCAAAACACCAAACCATTTTGATAACTTATACTACAAGAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGGTCTACTGATTCATTGGTTAAATCTTATAGTAATAATCAAAATGCATTTGAATCAGATTTTGCTACTGCAATGATTAAGATGGGAAATAACAATCCTCTTACCGGATCCAAAGGTGAGATTAGGAAGCAATGCAGGAGAGCCAATTAA
Protein sequence

>MS.gene009691.t1

MALSSSKVSLNFFCFVLFMFFLIGSSFSQLSENFYAKKCPNVFKAVNSVVHSAVAREPRMGGSLLRLHFHDCFVNGCDGSVLLDDTPSNKGEKTALPNKDSLRGFEVIDAIKSKVESVCPGVVSCADILAIAARDSVVNLGGPFWKVKLGRRDSKTASLNDANSGVIPPPFSTLSNLINRFKAQGLSTKDMVALSGAHTIGKARCTVYRDRIYNDTNIDSLFAKSRQRNCPRKSGTIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQNAFESDFATAMIKMGNNNPLTGSKGEIRKQCRRAN