AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009689

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009689.t1 MTR_5g074970 97.403 308 8 0 1 308 19 326 0.0 619
MS.gene009689.t1 MTR_3g466200 72.403 308 84 1 1 308 14 320 8.61e-167 466
MS.gene009689.t1 MTR_3g094650 66.667 309 100 3 1 308 16 322 2.90e-147 417
MS.gene009689.t1 MTR_5g083860 64.548 299 104 2 10 308 29 325 1.48e-139 397
MS.gene009689.t1 MTR_3g094670 64.401 309 107 3 1 308 16 322 4.19e-135 386
MS.gene009689.t1 MTR_4g029170 62.658 316 107 3 1 308 9 321 1.95e-134 384
MS.gene009689.t1 MTR_3g094630 63.725 306 109 2 3 308 19 322 2.18e-131 376
MS.gene009689.t1 MTR_4g029200 59.333 300 118 2 9 308 43 338 9.40e-130 373
MS.gene009689.t1 MTR_4g029180 63.390 295 104 2 15 308 30 321 1.52e-127 367
MS.gene009689.t1 MTR_4g029190 58.766 308 120 4 4 308 37 340 3.19e-127 367
MS.gene009689.t1 MTR_3g072190 61.409 298 111 3 11 308 25 318 1.01e-125 362
MS.gene009689.t1 MTR_7g072510 59.197 299 118 2 10 308 18 312 2.30e-124 358
MS.gene009689.t1 MTR_4g083710 58.609 302 120 4 10 308 25 324 4.70e-124 358
MS.gene009689.t1 MTR_2g084080 58.528 299 120 2 10 308 23 317 1.76e-123 356
MS.gene009689.t1 MTR_7g072480 59.091 308 122 2 1 308 13 316 2.92e-121 350
MS.gene009689.t1 MTR_5g074860 59.468 301 112 6 12 307 29 324 1.41e-120 349
MS.gene009689.t1 MTR_2g084110 57.525 299 123 2 10 308 23 317 1.83e-120 348
MS.gene009689.t1 MTR_4g074995 57.475 301 112 4 10 308 22 308 4.74e-120 347
MS.gene009689.t1 MTR_5g074740 57.419 310 122 7 4 308 17 321 7.23e-120 347
MS.gene009689.t1 MTR_5g074760 56.774 310 124 7 4 308 17 321 8.62e-119 344
MS.gene009689.t1 MTR_3g466180 60.535 299 114 2 10 308 29 323 2.28e-118 343
MS.gene009689.t1 MTR_5g074710 56.129 310 126 7 4 308 17 321 1.59e-116 338
MS.gene009689.t1 MTR_2g084090 56.187 299 128 2 10 308 23 318 3.75e-116 338
MS.gene009689.t1 MTR_2g084020 57.000 300 124 3 10 308 23 318 9.48e-116 337
MS.gene009689.t1 MTR_3g467600 55.305 311 130 6 3 308 18 324 2.72e-115 335
MS.gene009689.t1 MTR_2g084010 56.333 300 126 3 10 308 23 318 3.05e-114 333
MS.gene009689.t1 MTR_7g026990 56.393 305 127 4 5 308 23 322 4.54e-114 332
MS.gene009689.t1 MTR_1g115900 54.967 302 128 4 10 308 25 321 1.51e-113 331
MS.gene009689.t1 MTR_4g074990 54.153 301 119 4 10 308 22 305 2.70e-112 327
MS.gene009689.t1 MTR_2g084000 55.000 300 130 3 10 308 24 319 3.67e-111 325
MS.gene009689.t1 MTR_5g021060 52.131 305 134 4 12 308 30 330 4.42e-104 307
MS.gene009689.t1 MTR_5g017850 50.476 315 145 3 1 308 16 326 1.04e-103 306
MS.gene009689.t1 MTR_3g072190 61.024 254 95 2 55 308 2 251 1.14e-103 303
MS.gene009689.t1 MTR_5g017860 50.159 315 146 3 1 308 16 326 1.53e-103 306
MS.gene009689.t1 MTR_8g076820 51.466 307 137 4 10 308 28 330 1.09e-101 301
MS.gene009689.t1 MTR_1g054205 49.221 321 146 6 1 308 10 326 2.32e-101 300
MS.gene009689.t1 MTR_7g093370 47.962 319 150 6 1 308 58 371 3.22e-99 296
MS.gene009689.t1 MTR_4g122640 52.131 305 136 4 10 308 36 336 5.65e-99 295
MS.gene009689.t1 MTR_4g125940 50.157 319 142 5 1 308 17 329 1.04e-98 294
MS.gene009689.t1 MTR_1g022970 51.307 306 136 4 12 308 46 347 1.34e-98 294
MS.gene009689.t1 MTR_2g029730 47.771 314 151 4 4 308 17 326 1.63e-98 294
MS.gene009689.t1 MTR_4g074980 50.498 301 118 6 10 308 23 294 1.11e-97 290
MS.gene009689.t1 MTR_2g040000 51.290 310 133 5 11 308 28 331 3.70e-97 290
MS.gene009689.t1 MTR_2g029560 47.452 314 152 5 4 308 16 325 5.80e-97 290
MS.gene009689.t1 MTR_5g049280 48.397 312 141 7 11 308 32 337 9.92e-97 289
MS.gene009689.t1 MTR_2g028980 50.000 308 141 4 10 308 27 330 1.26e-95 286
MS.gene009689.t1 MTR_2g029750 50.325 308 140 4 10 308 27 330 2.79e-94 283
MS.gene009689.t1 MTR_2g029800 48.377 308 146 4 10 308 27 330 3.79e-93 280
MS.gene009689.t1 MTR_2g029830 48.377 308 146 4 10 308 26 329 1.39e-92 279
MS.gene009689.t1 MTR_5g014100 49.677 310 139 4 12 308 26 331 2.23e-92 278
MS.gene009689.t1 MTR_2g029815 47.896 309 146 5 10 308 27 330 1.90e-91 276
MS.gene009689.t1 MTR_5g074860 50.498 301 100 7 12 307 29 285 2.17e-91 273
MS.gene009689.t1 MTR_2g029740 49.026 308 144 5 10 308 27 330 7.49e-91 275
MS.gene009689.t1 MTR_2g029820 47.896 309 146 5 10 308 27 330 9.21e-91 274
MS.gene009689.t1 MTR_4g125940 51.613 279 118 5 41 308 2 274 8.59e-90 269
MS.gene009689.t1 MTR_4g074980 55.365 233 100 3 10 240 23 253 8.92e-90 268
MS.gene009689.t1 MTR_2g029860 45.938 320 157 5 1 308 15 330 4.31e-88 267
MS.gene009689.t1 MTR_4g030890 45.981 311 154 5 5 308 93 396 7.69e-88 269
MS.gene009689.t1 MTR_4g031140 45.307 309 149 6 10 308 26 324 4.93e-87 264
MS.gene009689.t1 MTR_2g029910 45.455 308 156 4 10 308 28 332 8.89e-87 264
MS.gene009689.t1 MTR_2g029850 45.484 310 152 5 10 308 27 330 6.25e-85 259
MS.gene009689.t1 MTR_1g077000 43.624 298 158 5 12 308 39 327 5.77e-82 251
MS.gene009689.t1 MTR_0155s0040 43.333 300 160 5 10 308 25 315 1.78e-81 249
MS.gene009689.t1 MTR_2g088770 43.533 317 164 7 1 308 15 325 1.22e-80 248
MS.gene009689.t1 MTR_1g038680 44.224 303 156 5 16 308 33 332 1.38e-79 245
MS.gene009689.t1 MTR_4g046713 40.506 316 175 5 1 308 16 326 8.62e-79 243
MS.gene009689.t1 MTR_1g086320 42.949 312 165 5 7 308 25 333 5.13e-78 241
MS.gene009689.t1 MTR_7g029030 45.425 306 150 7 11 308 24 320 2.46e-77 239
MS.gene009689.t1 MTR_6g027440 41.424 309 176 3 1 308 10 314 4.30e-76 236
MS.gene009689.t1 MTR_3g092990 41.905 315 173 4 1 308 15 326 3.76e-75 233
MS.gene009689.t1 MTR_1g086490 41.824 318 167 5 7 308 25 340 8.49e-75 233
MS.gene009689.t1 MTR_1g025980 43.046 302 156 6 10 304 22 314 5.28e-74 230
MS.gene009689.t1 MTR_2g029830 48.077 260 122 4 58 308 6 261 9.87e-74 228
MS.gene009689.t1 MTR_1g101830 39.557 316 174 7 1 308 16 322 1.27e-73 229
MS.gene009689.t1 MTR_2g008710 42.434 304 155 6 16 308 31 325 2.07e-73 229
MS.gene009689.t1 MTR_6g043280 43.522 301 157 6 12 308 41 332 2.25e-73 229
MS.gene009689.t1 MTR_5g022870 40.000 315 172 6 1 308 12 316 5.06e-71 223
MS.gene009689.t1 MTR_4g087965 44.590 305 155 6 11 304 41 342 1.24e-70 223
MS.gene009689.t1 MTR_4g114210 40.514 311 164 6 10 308 19 320 1.44e-70 221
MS.gene009689.t1 MTR_2g437770 39.672 305 163 6 12 308 50 341 9.46e-70 220
MS.gene009689.t1 MTR_8g075100 39.482 309 160 7 12 308 26 319 1.56e-69 219
MS.gene009689.t1 MTR_7g086820 38.889 306 173 4 8 308 16 312 3.19e-69 218
MS.gene009689.t1 MTR_4g133800 39.333 300 162 6 17 308 46 333 6.86e-69 218
MS.gene009689.t1 MTR_7g107520 39.803 304 168 6 12 308 25 320 1.41e-67 214
MS.gene009689.t1 MTR_5g074700 52.423 227 88 8 85 308 5 214 8.38e-66 206
MS.gene009689.t1 MTR_7g086870 37.710 297 178 3 12 308 22 311 1.82e-65 208
MS.gene009689.t1 MTR_0286s0010 39.159 309 172 8 10 308 32 334 2.50e-65 208
MS.gene009689.t1 MTR_6g008075 39.159 309 172 8 10 308 32 334 2.50e-65 208
MS.gene009689.t1 MTR_2g008160 40.566 318 164 7 5 308 17 323 3.97e-65 207
MS.gene009689.t1 MTR_3g072210 56.842 190 76 4 121 308 53 238 2.07e-64 203
MS.gene009689.t1 MTR_1g090760 37.419 310 182 5 8 308 24 330 6.97e-64 205
MS.gene009689.t1 MTR_3g092990 39.683 315 169 5 1 308 15 315 1.72e-63 203
MS.gene009689.t1 MTR_6g043460 38.851 296 171 5 12 304 36 324 2.54e-63 204
MS.gene009689.t1 MTR_2g077990 38.739 333 166 9 10 306 74 404 6.22e-63 204
MS.gene009689.t1 MTR_4g095450 41.639 305 163 9 8 304 23 320 6.49e-63 202
MS.gene009689.t1 MTR_8g062780 38.961 308 175 5 10 308 21 324 1.11e-62 201
MS.gene009689.t1 MTR_2g078610 37.838 333 169 8 10 306 74 404 2.47e-62 203
MS.gene009689.t1 MTR_2g067440 36.747 332 173 7 10 307 58 386 4.17e-62 202
MS.gene009689.t1 MTR_5g016010 37.658 316 179 7 1 304 16 325 7.40e-62 199
MS.gene009689.t1 MTR_4g127670 41.158 311 160 10 11 308 23 323 8.98e-62 199
MS.gene009689.t1 MTR_6g043240 38.333 300 172 6 12 308 42 331 5.42e-61 198
MS.gene009689.t1 MTR_5g033470 36.156 307 186 5 11 308 72 377 1.11e-60 198
MS.gene009689.t1 MTR_4g132110 35.256 312 196 4 1 308 19 328 7.61e-60 194
MS.gene009689.t1 MTR_2g099175 36.156 307 181 5 11 308 35 335 2.76e-58 190
MS.gene009689.t1 MTR_1g009750 38.511 309 175 7 10 308 25 328 2.91e-58 190
MS.gene009689.t1 MTR_3g105790 36.246 309 178 5 10 308 23 322 4.46e-58 189
MS.gene009689.t1 MTR_2g078280 38.318 321 160 9 10 294 74 392 6.05e-58 191
MS.gene009689.t1 MTR_4g132490 35.197 304 187 4 11 308 28 327 6.90e-58 189
MS.gene009689.t1 MTR_1g066380 35.099 302 192 3 9 308 24 323 6.97e-58 189
MS.gene009689.t1 MTR_1g066640 36.213 301 188 3 10 308 25 323 8.92e-58 189
MS.gene009689.t1 MTR_4g132110 34.700 317 196 5 1 308 19 333 1.73e-57 188
MS.gene009689.t1 MTR_2g008730 43.089 246 123 5 74 308 62 301 1.21e-56 185
MS.gene009689.t1 MTR_1g066680 35.216 301 190 4 10 308 25 322 1.38e-56 186
MS.gene009689.t1 MTR_1g066710 35.216 301 191 3 10 308 25 323 2.09e-56 185
MS.gene009689.t1 MTR_7g072490 44.262 244 78 2 58 301 2 187 6.75e-56 180
MS.gene009689.t1 MTR_0147s0010 34.375 320 171 7 12 307 77 381 2.17e-54 181
MS.gene009689.t1 MTR_2g008160 38.141 312 145 7 5 308 17 288 3.09e-54 178
MS.gene009689.t1 MTR_2g067450 36.246 309 178 8 10 307 9 309 1.65e-52 175
MS.gene009689.t1 MTR_1g009750 33.876 307 175 6 10 308 25 311 1.36e-47 162
MS.gene009689.t1 MTR_1g066380 35.294 255 161 3 56 308 3 255 2.26e-47 160
MS.gene009689.t1 MTR_2g008160 46.067 178 91 3 5 182 17 189 7.10e-46 154
MS.gene009689.t1 MTR_3g072260 62.162 111 42 0 11 121 25 135 1.54e-42 144
MS.gene009689.t1 MTR_3g105790 37.083 240 136 4 79 308 12 246 8.64e-41 142
MS.gene009689.t1 MTR_2g029880 39.175 194 95 4 124 308 9 188 2.68e-36 130
MS.gene009689.t1 MTR_2g077980 31.273 275 144 9 74 306 11 282 2.69e-27 108
MS.gene009689.t1 MTR_5g074770 53.191 94 41 2 216 307 16 108 2.65e-26 100
MS.gene009689.t1 MTR_5g058120 35.256 156 94 2 149 304 7 155 1.29e-25 102
MS.gene009689.t1 MTR_4g114220 57.317 82 25 2 38 119 29 100 4.23e-24 95.9
MS.gene009689.t1 MTR_6g048160 64.286 70 21 2 51 120 22 87 7.05e-23 90.9
MS.gene009689.t1 MTR_2g078560 31.390 223 117 7 117 304 95 316 8.79e-23 96.7
MS.gene009689.t1 MTR_3g462850 37.671 146 72 6 177 308 9 149 5.92e-21 87.8
MS.gene009689.t1 MTR_7g086790 41.322 121 66 3 59 179 17 132 7.01e-21 88.6
MS.gene009689.t1 MTR_4g031040 35.294 170 69 5 73 242 3 131 1.63e-20 85.9
MS.gene009689.t1 MTR_1g089005 41.525 118 62 2 12 123 15 131 1.27e-19 84.3
MS.gene009689.t1 MTR_1g098320 36.036 111 71 0 198 308 14 124 4.59e-18 79.7
MS.gene009689.t1 MTR_2g029930 35.870 92 34 2 10 90 17 94 2.43e-13 65.5
MS.gene009689.t1 MTR_3g086710 51.562 64 24 1 1 57 1 64 6.65e-13 63.9
MS.gene009689.t1 MTR_7g086810 30.508 118 56 1 8 125 2 93 2.81e-12 65.9
MS.gene009689.t1 MTR_0147s0040 36.986 73 46 0 234 306 9 81 2.82e-12 62.0
MS.gene009689.t1 MTR_4g012865 39.706 68 41 0 12 79 77 144 3.32e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009689.t1 AT5G05340 65.552 299 101 2 10 308 28 324 2.62e-141 402
MS.gene009689.t1 AT5G58390 66.234 308 103 1 1 308 10 316 8.21e-141 400
MS.gene009689.t1 AT5G58400 62.903 310 112 2 1 308 17 325 2.43e-139 397
MS.gene009689.t1 AT1G14550 56.478 301 126 3 10 308 24 321 6.49e-119 345
MS.gene009689.t1 AT1G14540 53.135 303 136 4 8 308 17 315 2.47e-107 315
MS.gene009689.t1 AT4G36430 50.955 314 141 5 4 308 21 330 2.83e-104 308
MS.gene009689.t1 AT5G06720 50.323 310 141 4 8 308 28 333 1.84e-103 306
MS.gene009689.t1 AT3G50990 51.133 309 139 5 8 308 37 341 1.24e-102 304
MS.gene009689.t1 AT5G66390 50.000 310 143 4 7 308 28 333 1.61e-102 303
MS.gene009689.t1 AT5G06730 48.089 314 150 4 4 308 25 334 1.39e-101 302
MS.gene009689.t1 AT2G18150 51.163 301 135 4 16 308 40 336 5.31e-101 300
MS.gene009689.t1 AT1G44970 51.274 314 139 6 5 308 37 346 6.94e-101 300
MS.gene009689.t1 AT2G18140 49.669 302 140 4 15 308 38 335 2.25e-96 288
MS.gene009689.t1 AT4G16270 51.495 301 132 5 16 308 54 348 7.38e-96 287
MS.gene009689.t1 AT1G49570 49.837 307 142 3 7 304 43 346 2.52e-94 283
MS.gene009689.t1 AT4G08770 47.937 315 143 6 8 308 20 327 3.22e-93 280
MS.gene009689.t1 AT5G19890 48.276 319 144 6 1 308 19 327 1.55e-92 278
MS.gene009689.t1 AT1G68850 45.779 308 154 5 12 308 30 335 3.41e-92 277
MS.gene009689.t1 AT5G19880 47.910 311 146 5 10 308 23 329 9.32e-92 276
MS.gene009689.t1 AT2G35380 47.923 313 151 4 7 308 24 335 2.07e-91 275
MS.gene009689.t1 AT4G08780 46.667 315 147 6 8 308 20 327 2.54e-91 275
MS.gene009689.t1 AT2G38390 46.774 310 149 6 10 308 29 333 4.17e-91 275
MS.gene009689.t1 AT3G49110 46.894 322 148 7 3 308 22 336 2.77e-89 270
MS.gene009689.t1 AT3G32980 45.860 314 151 6 8 308 27 334 3.16e-89 270
MS.gene009689.t1 AT2G38380 46.452 310 150 6 10 308 29 333 4.45e-89 270
MS.gene009689.t1 AT3G49120 45.860 314 151 6 8 308 28 335 2.20e-87 266
MS.gene009689.t1 AT1G71695 44.186 301 159 4 12 308 44 339 8.20e-81 249
MS.gene009689.t1 AT2G22420 43.750 304 157 4 12 308 23 319 1.04e-80 248
MS.gene009689.t1 AT3G01190 43.137 306 155 8 12 308 26 321 1.15e-80 247
MS.gene009689.t1 AT1G05260 44.013 309 156 8 10 308 24 325 1.39e-78 242
MS.gene009689.t1 AT4G33420 43.624 298 158 5 12 308 37 325 1.66e-78 242
MS.gene009689.t1 AT4G33420 43.624 298 158 5 12 308 84 372 1.06e-77 241
MS.gene009689.t1 AT3G03670 40.190 316 175 5 1 308 12 321 2.46e-77 239
MS.gene009689.t1 AT4G11290 40.446 314 174 5 4 308 17 326 1.04e-76 238
MS.gene009689.t1 AT5G51890 40.064 312 173 6 4 308 18 322 2.20e-75 234
MS.gene009689.t1 AT5G17820 40.317 315 167 6 1 308 13 313 7.55e-75 232
MS.gene009689.t1 AT5G64120 40.129 309 168 6 7 308 30 328 5.88e-74 230
MS.gene009689.t1 AT5G17820 40.317 315 167 6 1 308 66 366 9.43e-74 231
MS.gene009689.t1 AT5G15180 41.176 306 163 8 12 308 32 329 5.21e-73 228
MS.gene009689.t1 AT5G40150 40.065 307 168 6 10 308 30 328 1.28e-72 227
MS.gene009689.t1 AT3G21770 40.575 313 171 7 4 307 21 327 2.08e-72 226
MS.gene009689.t1 AT1G05240 39.414 307 169 6 12 308 26 325 2.67e-71 223
MS.gene009689.t1 AT1G05250 39.414 307 169 6 12 308 26 325 2.67e-71 223
MS.gene009689.t1 AT3G28200 39.216 306 171 6 10 308 19 316 5.47e-71 223
MS.gene009689.t1 AT5G14130 39.873 316 176 5 1 308 21 330 1.32e-70 222
MS.gene009689.t1 AT2G41480 40.385 312 164 7 10 308 26 328 2.27e-70 221
MS.gene009689.t1 AT5G42180 40.256 313 171 7 1 306 12 315 2.45e-70 221
MS.gene009689.t1 AT4G26010 39.803 304 172 5 3 305 13 306 3.04e-70 220
MS.gene009689.t1 AT1G30870 42.345 307 155 6 12 308 51 345 3.51e-70 221
MS.gene009689.t1 AT5G14130 39.873 316 176 5 1 308 62 371 4.34e-70 222
MS.gene009689.t1 AT5G47000 40.968 310 174 5 4 308 25 330 4.91e-70 221
MS.gene009689.t1 AT4G26010 39.803 304 172 5 3 305 41 334 6.20e-70 220
MS.gene009689.t1 AT2G35380 48.163 245 116 3 74 308 4 247 6.56e-69 215
MS.gene009689.t1 AT2G24800 39.228 311 167 5 10 308 29 329 1.57e-67 214
MS.gene009689.t1 AT4G17690 40.864 301 170 5 12 308 26 322 1.75e-67 214
MS.gene009689.t1 AT4G33870 34.125 337 181 5 10 307 66 400 5.33e-66 212
MS.gene009689.t1 AT5G39580 41.196 301 159 7 16 308 29 319 5.55e-66 210
MS.gene009689.t1 AT5G67400 40.193 311 168 7 6 304 21 325 1.30e-65 209
MS.gene009689.t1 AT4G37530 41.587 315 160 9 5 304 20 325 4.78e-65 207
MS.gene009689.t1 AT1G34510 38.511 309 175 6 3 308 13 309 1.23e-64 206
MS.gene009689.t1 AT1G77100 39.935 308 170 9 8 308 20 319 2.24e-64 206
MS.gene009689.t1 AT4G37520 42.020 307 160 9 10 304 25 325 9.76e-64 204
MS.gene009689.t1 AT2G18980 39.062 320 173 8 1 308 14 323 1.08e-62 201
MS.gene009689.t1 AT3G49960 39.871 311 169 7 6 304 21 325 1.25e-62 201
MS.gene009689.t1 AT4G31760 37.459 307 181 4 8 308 25 326 1.43e-62 201
MS.gene009689.t1 AT4G25980 37.383 321 177 8 1 308 17 326 2.45e-62 201
MS.gene009689.t1 AT4G37520 40.850 306 162 8 10 304 25 322 2.69e-62 201
MS.gene009689.t1 AT5G64100 38.944 303 163 6 16 308 41 331 6.37e-62 199
MS.gene009689.t1 AT5G64110 40.000 325 167 8 2 308 16 330 1.08e-61 199
MS.gene009689.t1 AT1G24110 37.459 307 180 5 10 308 20 322 4.82e-61 197
MS.gene009689.t1 AT4G30170 40.391 307 169 7 10 308 25 325 1.65e-60 196
MS.gene009689.t1 AT2G34060 39.414 307 170 7 11 305 41 343 6.02e-60 195
MS.gene009689.t1 AT4G21960 36.789 299 185 3 12 308 31 327 2.81e-57 187
MS.gene009689.t1 AT5G22410 37.621 311 171 9 7 305 23 322 1.68e-55 183
MS.gene009689.t1 AT2G39040 38.188 309 177 7 11 308 45 350 2.67e-55 183
MS.gene009689.t1 AT4G37530 42.537 268 130 9 5 257 20 278 7.06e-55 180
MS.gene009689.t1 AT2G37130 34.641 306 185 7 11 308 29 327 3.00e-54 180
MS.gene009689.t1 AT2G37130 34.768 302 182 7 15 308 2 296 7.86e-54 177
MS.gene009689.t1 AT5G24070 37.868 272 153 5 46 308 71 335 1.68e-52 176
MS.gene009689.t1 AT2G43480 33.333 312 190 5 8 308 31 335 5.58e-50 169
MS.gene009689.t1 AT3G17070 32.119 302 200 2 12 308 38 339 8.38e-49 166
MS.gene009689.t1 AT2G24800 41.379 203 109 4 10 211 29 222 2.19e-43 149
MS.gene009689.t1 AT5G39580 42.424 198 104 4 16 213 29 216 8.30e-41 142
MS.gene009689.t1 AT4G25980 41.618 173 96 3 8 180 67 234 2.47e-40 142
MS.gene009689.t1 AT3G17070 30.385 260 175 3 54 308 18 276 1.97e-35 129
MS.gene009689.t1 AT4G32320 30.038 263 109 7 46 290 117 322 3.32e-19 86.7
MS.gene009689.t1 AT1G77490 27.863 262 142 10 46 289 106 338 4.18e-13 69.7
MS.gene009689.t1 AT1G77490 27.863 262 142 10 46 289 106 338 4.39e-13 69.7
MS.gene009689.t1 AT3G42570 29.661 118 81 1 65 180 32 149 2.64e-12 63.9

Find 67 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTCCACCTTAGACTTTA+TGG 0.119850 5.2:-62887290 None:intergenic
TTATCCAGGTTTCCTTTAAT+TGG 0.201465 5.2:-62889870 None:intergenic
TGCATTCTTCTCTCCTTTAT+TGG 0.219837 5.2:-62887224 None:intergenic
CAAGAATCTCATCAACAAAA+AGG 0.247712 5.2:+62889670 MS.gene009689:CDS
CCAAGTTTAACCTTCCAAAA+AGG 0.308795 5.2:-62889046 None:intergenic
TGTAGTATAAGTTATCAAAA+TGG 0.316765 5.2:-62889649 None:intergenic
AAGGACATGGTGGCCTTATC+TGG 0.324620 5.2:+62889184 MS.gene009689:CDS
GGAAATAACAAGCCTCTTAC+CGG 0.340680 5.2:+62889812 MS.gene009689:CDS
AATGCAGGAGAGCCAATTAA+AGG 0.372028 5.2:+62889858 MS.gene009689:CDS
CCCTTAGCAACCTTATCAAT+AGG 0.386741 5.2:+62889137 MS.gene009689:CDS
GATCAAAAGGGGAGATTAGA+AGG 0.387743 5.2:+62889834 MS.gene009689:CDS
TGCTACTGCAATGATTAAGA+TGG 0.388563 5.2:+62889790 MS.gene009689:CDS
CATTGATGCCATAAAGTCTA+AGG 0.390648 5.2:+62887282 MS.gene009689:CDS
TGGAGGATCTACTGATTCAT+TGG 0.391305 5.2:+62889724 MS.gene009689:CDS
AAGGTTGCTAAGGGTGGAAA+AGG 0.395412 5.2:-62889128 None:intergenic
GAGCTTTAAACCTATTGATA+AGG 0.399870 5.2:-62889147 None:intergenic
GATGACACACCCTCCAATAA+AGG 0.400602 5.2:+62887211 MS.gene009689:CDS
ACCTATTGATAAGGTTGCTA+AGG 0.414625 5.2:-62889138 None:intergenic
AAGCCTCTTACCGGATCAAA+AGG 0.417845 5.2:+62889821 MS.gene009689:CDS
TTCTTCTCTCCTTTATTGGA+GGG 0.419465 5.2:-62887220 None:intergenic
ACCTCTCAAAGAATCTTTGT+TGG 0.427591 5.2:-62887251 None:intergenic
CCTCTCAAAGAATCTTTGTT+GGG 0.433102 5.2:-62887250 None:intergenic
TTCTTAGGAGCTCACACAAT+TGG 0.437641 5.2:+62889476 MS.gene009689:intron
GGAAGGTTAAACTTGGAAGA+AGG 0.441433 5.2:+62889053 MS.gene009689:CDS
ACAATTCCTTTGCCTTGACT+TGG 0.450808 5.2:-62889564 None:intergenic
ATTCTTCTCTCCTTTATTGG+AGG 0.454303 5.2:-62887221 None:intergenic
GAAGGTTAAACTTGGAAGAA+GGG 0.455829 5.2:+62889054 MS.gene009689:CDS
GTAAATACGATCTCTATAAA+CGG 0.462556 5.2:-62889513 None:intergenic
TATAAGTTATCAAAATGGTT+TGG 0.466239 5.2:-62889644 None:intergenic
ATCAATAGGTTTAAAGCTCA+AGG 0.476560 5.2:+62889151 MS.gene009689:CDS
ACTGTTTGCATCATTGAGGC+TGG 0.487052 5.2:-62889089 None:intergenic
GCTACTGCAATGATTAAGAT+GGG 0.493974 5.2:+62889791 MS.gene009689:CDS
GGGAGATTAGAAGGCAATGC+AGG 0.503265 5.2:+62889843 MS.gene009689:CDS
CCCAACAAAGATTCTTTGAG+AGG 0.507682 5.2:+62887250 MS.gene009689:CDS
CTAAGGGTGGAAAAGGGAGG+TGG 0.512202 5.2:-62889121 None:intergenic
AGCCTCTTACCGGATCAAAA+GGG 0.519613 5.2:+62889822 MS.gene009689:CDS
TATTGATAACAGGGCTGTGA+TGG 0.525762 5.2:+62887175 MS.gene009689:intron
CACCACTGTTTGCATCATTG+AGG 0.529112 5.2:-62889093 None:intergenic
CAAAGCAGTCATGAAAATGA+AGG 0.532001 5.2:-62885606 None:intergenic
TCAGCACAAGACACCACACC+GGG 0.532783 5.2:-62887319 None:intergenic
ATAGTTTATTTGCCAAGTCA+AGG 0.536133 5.2:+62889552 MS.gene009689:CDS
AGCTCAAGGACTCTCTACTA+AGG 0.542515 5.2:+62889165 MS.gene009689:CDS
AGGTTGCTAAGGGTGGAAAA+GGG 0.542574 5.2:-62889127 None:intergenic
CCTATTGATAAGGTTGCTAA+GGG 0.552353 5.2:-62889137 None:intergenic
AACAGAATCACGAGCAGCAA+TGG 0.556484 5.2:-62887350 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.559330 5.2:-62889697 None:intergenic
AGGAATTGTCCAAGGAAAAG+TGG 0.565194 5.2:+62889578 MS.gene009689:CDS
TTGCTAAGGGTGGAAAAGGG+AGG 0.567320 5.2:-62889124 None:intergenic
ATTGATAAGGTTGCTAAGGG+TGG 0.575681 5.2:-62889134 None:intergenic
TATTTGCCAAGTCAAGGCAA+AGG 0.587188 5.2:+62889558 MS.gene009689:CDS
GCTAGAGAACCTCGCATGGG+AGG 0.612577 5.2:+62885571 MS.gene009689:CDS
CAAGGCAAAGGAATTGTCCA+AGG 0.615444 5.2:+62889570 MS.gene009689:CDS
TGTTGCTAGAGAACCTCGCA+TGG 0.621286 5.2:+62885567 MS.gene009689:CDS
GCCTCTTACCGGATCAAAAG+GGG 0.621930 5.2:+62889823 MS.gene009689:CDS
ATCAGCACAAGACACCACAC+CGG 0.622378 5.2:-62887320 None:intergenic
TGATGCCATAAAGTCTAAGG+TGG 0.622773 5.2:+62887285 MS.gene009689:CDS
AGGAGCTCACACAATTGGAA+AGG 0.625854 5.2:+62889481 MS.gene009689:intron
CTCACACAATTGGAAAGGCA+AGG 0.636642 5.2:+62889486 MS.gene009689:CDS
AAGGTGGAGTCAGTATGCCC+CGG 0.647987 5.2:+62887301 MS.gene009689:CDS
AGAAGAGATCCTCCCATGCG+AGG 0.655274 5.2:-62885580 None:intergenic
GTTGCTAGAGAACCTCGCAT+GGG 0.656226 5.2:+62885568 MS.gene009689:CDS
AGGACTCTCTACTAAGGACA+TGG 0.666154 5.2:+62889171 MS.gene009689:CDS
GGAGTCAGTATGCCCCGGTG+TGG 0.686268 5.2:+62887306 MS.gene009689:CDS
AGCCTCAATGATGCAAACAG+TGG 0.715380 5.2:+62889091 MS.gene009689:CDS
AGCAACAGCAGAGTGAACAA+CGG 0.720096 5.2:-62885551 None:intergenic
ACTCTCTACTAAGGACATGG+TGG 0.722310 5.2:+62889174 MS.gene009689:CDS
CAGCACAAGACACCACACCG+GGG 0.804598 5.2:-62887318 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTAGATAAAGATTA+AGG - chr5.2:62886600-62886619 None:intergenic 10.0%
!! AGAAATAAAAAAAATATTGA+GGG + chr5.2:62888505-62888524 MS.gene009689:intron 10.0%
!! TAATCTTTATCTAATAAATT+TGG + chr5.2:62886600-62886619 MS.gene009689:intron 10.0%
!! TAGAAATAAAAAAAATATTG+AGG + chr5.2:62888504-62888523 MS.gene009689:intron 10.0%
!!! AGATTGAATATATTATTTTT+TGG + chr5.2:62886134-62886153 MS.gene009689:intron 10.0%
!!! ATGTTTCATATTTTATAATA+GGG + chr5.2:62888354-62888373 MS.gene009689:intron 10.0%
!!! CACATATTTTTATTTTATTT+TGG + chr5.2:62888330-62888349 MS.gene009689:intron 10.0%
!!! GAATTAATTTTTTTCTTAAA+TGG - chr5.2:62888190-62888209 None:intergenic 10.0%
!! ATTAATTCATAAATATGTGT+TGG - chr5.2:62887912-62887931 None:intergenic 15.0%
!! TATTAGAAGAAAAGAAATTA+GGG - chr5.2:62888951-62888970 None:intergenic 15.0%
!! TTATTAGAAGAAAAGAAATT+AGG - chr5.2:62888952-62888971 None:intergenic 15.0%
!!! AGTATAAATTTTACTTTTCA+AGG - chr5.2:62888048-62888067 None:intergenic 15.0%
!!! GATGTTTCATATTTTATAAT+AGG + chr5.2:62888353-62888372 MS.gene009689:intron 15.0%
!!! GTATAAATTTTACTTTTCAA+GGG - chr5.2:62888047-62888066 None:intergenic 15.0%
!!! TGATCTATAATTTGTAAAAT+GGG + chr5.2:62887493-62887512 MS.gene009689:intron 15.0%
!!! TTAATTTTTTTCTTAAATGG+TGG - chr5.2:62888187-62888206 None:intergenic 15.0%
!!! TTTTATTGAAGAGATTTTAA+TGG + chr5.2:62887742-62887761 MS.gene009689:intron 15.0%
!! AATATAATGTTTACAAGTCT+TGG + chr5.2:62887575-62887594 MS.gene009689:intron 20.0%
!! AGCGCATATTTAATTATTAA+GGG - chr5.2:62888107-62888126 None:intergenic 20.0%
!! ATATTTAATTATTAAGGGAG+GGG - chr5.2:62888102-62888121 None:intergenic 20.0%
!! CATATTTAATTATTAAGGGA+GGG - chr5.2:62888103-62888122 None:intergenic 20.0%
!! GTAATTTAAGCATCATATAA+GGG - chr5.2:62888076-62888095 None:intergenic 20.0%
!! GTGGATATATAATATAGAAA+TGG - chr5.2:62885853-62885872 None:intergenic 20.0%
!! TAGCGCATATTTAATTATTA+AGG - chr5.2:62888108-62888127 None:intergenic 20.0%
!! TATAAGTTATCAAAATGGTT+TGG - chr5.2:62889647-62889666 None:intergenic 20.0%
!! TGAATCATATGATTTAAATG+TGG + chr5.2:62887028-62887047 MS.gene009689:intron 20.0%
!! TGTAATTTAAGCATCATATA+AGG - chr5.2:62888077-62888096 None:intergenic 20.0%
!! TGTAGTATAAGTTATCAAAA+TGG - chr5.2:62889652-62889671 None:intergenic 20.0%
!! TTACTAAATACAATAAAGCA+TGG - chr5.2:62888305-62888324 None:intergenic 20.0%
!! TTTCGAAAAAAATAGTATTG+CGG - chr5.2:62888452-62888471 None:intergenic 20.0%
!!! AAAAGATTAATTTGTACGTA+CGG - chr5.2:62886713-62886732 None:intergenic 20.0%
!!! AAACTTCATAAACATGATTT+TGG + chr5.2:62887121-62887140 MS.gene009689:intron 20.0%
!!! AACAATACTTTTTTTTAGAG+GGG + chr5.2:62886680-62886699 MS.gene009689:intron 20.0%
!!! AAGTTTTAATTAGACACAAT+AGG - chr5.2:62889223-62889242 None:intergenic 20.0%
!!! AATCATGTTTATGAAGTTTT+AGG - chr5.2:62887120-62887139 None:intergenic 20.0%
!!! ACAACAATACTTTTTTTTAG+AGG + chr5.2:62886678-62886697 MS.gene009689:intron 20.0%
!!! AGTGTATATTTTAACATAAG+AGG + chr5.2:62888636-62888655 MS.gene009689:intron 20.0%
!!! ATCATGTTTATGAAGTTTTA+GGG - chr5.2:62887119-62887138 None:intergenic 20.0%
!!! ATTTCTTCCTCAATAAATTT+TGG + chr5.2:62885974-62885993 MS.gene009689:intron 20.0%
!!! ATTTTTTGCTGATAATTTTC+TGG - chr5.2:62887603-62887622 None:intergenic 20.0%
!!! CAACAATACTTTTTTTTAGA+GGG + chr5.2:62886679-62886698 MS.gene009689:intron 20.0%
!!! CTAATATGTTTTGAATAAGA+GGG + chr5.2:62888607-62888626 MS.gene009689:intron 20.0%
!!! CTGATCTATAATTTGTAAAA+TGG + chr5.2:62887492-62887511 MS.gene009689:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG + chr5.2:62888637-62888656 MS.gene009689:intron 20.0%
!!! GTGTATATTTTAACATAAGA+GGG - chr5.2:62888656-62888637 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+GGG + chr5.2:62888608-62888627 MS.gene009689:intron 20.0%
!!! TCTAATATGTTTTGAATAAG+AGG + chr5.2:62888606-62888625 MS.gene009689:intron 20.0%
!!! TGAAAGTTTTTTAGTAGTAA+TGG + chr5.2:62886652-62886671 MS.gene009689:intron 20.0%
!!! TGTATATTTTAACATAAGAG+GGG + chr5.2:62888638-62888657 MS.gene009689:intron 20.0%
!!! TTGAGATATGTGTTTTTTTT+TGG + chr5.2:62886519-62886538 MS.gene009689:intron 20.0%
! AAGAATCTCATCAACAAAAA+GGG + chr5.2:62889671-62889690 MS.gene009689:CDS 25.0%
! ATTTACAGCCTTAAAAACAT+TGG - chr5.2:62885530-62885549 None:intergenic 25.0%
! CATCATCATTAAATTTGTGA+CGG - chr5.2:62885773-62885792 None:intergenic 25.0%
! CTTAGAACAAAACGAAAATT+AGG - chr5.2:62889368-62889387 None:intergenic 25.0%
! CTTATTGAGTGAATTGAATA+GGG + chr5.2:62886191-62886210 MS.gene009689:intron 25.0%
! CTTGATATATATCACACATT+TGG + chr5.2:62889295-62889314 MS.gene009689:intron 25.0%
! GAAATCTTCATATGAACTAT+TGG - chr5.2:62886081-62886100 None:intergenic 25.0%
! GCATATTTAATTATTAAGGG+AGG - chr5.2:62888104-62888123 None:intergenic 25.0%
! GTAAATACGATCTCTATAAA+CGG - chr5.2:62889516-62889535 None:intergenic 25.0%
! GTGAAAAAAAAAAGAGAAGT+TGG + chr5.2:62888794-62888813 MS.gene009689:intron 25.0%
! GTTAGAACAAAACGAAAATT+AGG - chr5.2:62887862-62887881 None:intergenic 25.0%
! TATTTAATTATTAAGGGAGG+GGG - chr5.2:62888101-62888120 None:intergenic 25.0%
! TCTTATTGAGTGAATTGAAT+AGG + chr5.2:62886190-62886209 MS.gene009689:intron 25.0%
! TTAAACATCAAGCTTCAAAA+AGG - chr5.2:62886804-62886823 None:intergenic 25.0%
! TTAGTATTTGATCATTGCAA+TGG - chr5.2:62885699-62885718 None:intergenic 25.0%
! TTCGAAAAAAATAGTATTGC+GGG - chr5.2:62888451-62888470 None:intergenic 25.0%
! TTTACAGCCTTAAAAACATT+GGG - chr5.2:62885529-62885548 None:intergenic 25.0%
!! AATATGTGCATATAACTTGT+TGG - chr5.2:62887715-62887734 None:intergenic 25.0%
!!! AAATTTTACTTTTCAAGGGA+GGG - chr5.2:62888043-62888062 None:intergenic 25.0%
!!! ACTTTTTGCTTATTGATAAC+AGG + chr5.2:62887165-62887184 MS.gene009689:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + chr5.2:62888533-62888552 MS.gene009689:intron 25.0%
!!! CTTTTTGCTTATTGATAACA+GGG + chr5.2:62887166-62887185 MS.gene009689:intron 25.0%
!!! GGTGTATATTTTAACATAAG+AGG - chr5.2:62888019-62888038 None:intergenic 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + chr5.2:62888534-62888553 MS.gene009689:intron 25.0%
!!! TAAATTTTACTTTTCAAGGG+AGG - chr5.2:62888044-62888063 None:intergenic 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG + chr5.2:62888535-62888554 MS.gene009689:intron 25.0%
AAAAAGACATGTACCAGATA+AGG - chr5.2:62889200-62889219 None:intergenic 30.0%
AAAATCAGACATGCTAAATG+TGG - chr5.2:62886974-62886993 None:intergenic 30.0%
ACAACATGGGAAAATTACAA+GGG - chr5.2:62886551-62886570 None:intergenic 30.0%
ATAGTTTATTTGCCAAGTCA+AGG + chr5.2:62889552-62889571 MS.gene009689:CDS 30.0%
ATATATTCACCAACCTATGT+TGG - chr5.2:62886424-62886443 None:intergenic 30.0%
ATGTAATTCAAGCTTCTCTT+AGG + chr5.2:62888564-62888583 MS.gene009689:intron 30.0%
ATTAGCGCCAAAATTTATTG+AGG - chr5.2:62885984-62886003 None:intergenic 30.0%
ATTTAAGCATCATATAAGGG+TGG - chr5.2:62888073-62888092 None:intergenic 30.0%
CAAGAATCTCATCAACAAAA+AGG + chr5.2:62889670-62889689 MS.gene009689:CDS 30.0%
CATTATGTTTAGCAAAATCG+CGG - chr5.2:62888831-62888850 None:intergenic 30.0%
GAGTATTTAACTCACAACAT+GGG - chr5.2:62886564-62886583 None:intergenic 30.0%
GTAATTCAAGCATCTTTGAA+GGG + chr5.2:62888669-62888688 MS.gene009689:intron 30.0%
GTAATTCAAGCATCTTTGAA+GGG - chr5.2:62888688-62888669 None:intergenic 30.0%
TATATTCACCAACCTATGTT+GGG - chr5.2:62886423-62886442 None:intergenic 30.0%
TGCATTGTGAATAAAGCAAA+AGG + chr5.2:62886763-62886782 MS.gene009689:intron 30.0%
TGTAATTCAAGCATCTTTGA+AGG + chr5.2:62888668-62888687 MS.gene009689:intron 30.0%
TGTAATTCAAGCATCTTTGA+AGG - chr5.2:62888687-62888668 None:intergenic 30.0%
TGTAATTCAAGCTTCTCTTA+GGG + chr5.2:62888565-62888584 MS.gene009689:intron 30.0%
TTCGAAGAATCTATTTCGTT+TGG + chr5.2:62888731-62888750 MS.gene009689:intron 30.0%
TTTAAGCATCATATAAGGGT+GGG - chr5.2:62888072-62888091 None:intergenic 30.0%
! ATCAATAGGTTTAAAGCTCA+AGG + chr5.2:62889151-62889170 MS.gene009689:CDS 30.0%
! TTCTATCATATTTTGCAGCT+TGG + chr5.2:62889019-62889038 MS.gene009689:intron 30.0%
!! AATTTTACTTTTCAAGGGAG+GGG - chr5.2:62888042-62888061 None:intergenic 30.0%
!! AGCATGTCTGATTTTTGTTT+TGG + chr5.2:62886979-62886998 MS.gene009689:intron 30.0%
!! CTTTCAAAGAGTCTTATTGA+GGG + chr5.2:62886282-62886301 MS.gene009689:intron 30.0%
!! GAGCTTTAAACCTATTGATA+AGG - chr5.2:62889150-62889169 None:intergenic 30.0%
!! TCTTTCAAAGAGTCTTATTG+AGG + chr5.2:62886281-62886300 MS.gene009689:intron 30.0%
!! TTTATTGTACCACTTTTCCT+TGG - chr5.2:62889590-62889609 None:intergenic 30.0%
!!! AAGCTTCAAAAAGGCATTTT+TGG - chr5.2:62886795-62886814 None:intergenic 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG + chr5.2:62888641-62888660 MS.gene009689:intron 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG + chr5.2:62888642-62888661 MS.gene009689:intron 30.0%
!!! TTTCTCACTAGTTTTCTAAG+TGG - chr5.2:62885875-62885894 None:intergenic 30.0%
AAAGCTCTTGATCAGAATGA+AGG - chr5.2:62889700-62889719 None:intergenic 35.0%
ACCTATTGATAAGGTTGCTA+AGG - chr5.2:62889141-62889160 None:intergenic 35.0%
ACCTCTCAAAGAATCTTTGT+TGG - chr5.2:62887254-62887273 None:intergenic 35.0%
ACGCATGTCTAACTAATATG+CGG - chr5.2:62886899-62886918 None:intergenic 35.0%
AGGGCAATGATAGGTATATA+AGG - chr5.2:62887100-62887119 None:intergenic 35.0%
ATATTCACCAACCTATGTTG+GGG - chr5.2:62886422-62886441 None:intergenic 35.0%
ATCATCACACTATTTAGTGC+TGG - chr5.2:62885935-62885954 None:intergenic 35.0%
ATTCTTCTCTCCTTTATTGG+AGG - chr5.2:62887224-62887243 None:intergenic 35.0%
CAAAGCAGTCATGAAAATGA+AGG - chr5.2:62885609-62885628 None:intergenic 35.0%
CACAACATGGGAAAATTACA+AGG - chr5.2:62886552-62886571 None:intergenic 35.0%
CATTGATGCCATAAAGTCTA+AGG + chr5.2:62887282-62887301 MS.gene009689:CDS 35.0%
CCAAGTTTAACCTTCCAAAA+AGG - chr5.2:62889049-62889068 None:intergenic 35.0%
CCTATTGATAAGGTTGCTAA+GGG - chr5.2:62889140-62889159 None:intergenic 35.0%
CCTCTCAAAGAATCTTTGTT+GGG - chr5.2:62887253-62887272 None:intergenic 35.0%
CGAGTATTTAACTCACAACA+TGG - chr5.2:62886565-62886584 None:intergenic 35.0%
GAAGGTTAAACTTGGAAGAA+GGG + chr5.2:62889054-62889073 MS.gene009689:CDS 35.0%
GAATCTATTTCGTTTGGCAA+TGG + chr5.2:62888737-62888756 MS.gene009689:intron 35.0%
GCTACTGCAATGATTAAGAT+GGG + chr5.2:62889791-62889810 MS.gene009689:CDS 35.0%
GGACGTAACTATTGCAATAA+TGG + chr5.2:62886303-62886322 MS.gene009689:intron 35.0%
GTAATTCAAGCTTCTCTTAG+GGG + chr5.2:62888566-62888585 MS.gene009689:intron 35.0%
TATCACACATTTGGTTGACT+AGG + chr5.2:62889304-62889323 MS.gene009689:intron 35.0%
TATCCAACCAAGAATCACTT+CGG + chr5.2:62889430-62889449 MS.gene009689:intron 35.0%
TGCATTCTTCTCTCCTTTAT+TGG - chr5.2:62887227-62887246 None:intergenic 35.0%
TGCTACTGCAATGATTAAGA+TGG + chr5.2:62889790-62889809 MS.gene009689:CDS 35.0%
TTAAGCATCATATAAGGGTG+GGG - chr5.2:62888071-62888090 None:intergenic 35.0%
TTCTTCTCTCCTTTATTGGA+GGG - chr5.2:62887223-62887242 None:intergenic 35.0%
! ATCATATTTTGCAGCTTGGA+GGG + chr5.2:62889023-62889042 MS.gene009689:intron 35.0%
! TATCATATTTTGCAGCTTGG+AGG + chr5.2:62889022-62889041 MS.gene009689:intron 35.0%
! TCTGATCAAGAGCTTTTCAA+TGG + chr5.2:62889704-62889723 MS.gene009689:CDS 35.0%
!! AGATTTTAACATAAGAGGGG+AGG + chr5.2:62888538-62888557 MS.gene009689:intron 35.0%
!! ATGTTTTGAATAAGAGGGGA+GGG + chr5.2:62888612-62888631 MS.gene009689:intron 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG + chr5.2:62888540-62888559 MS.gene009689:intron 35.0%
!! ATTTTACTTTTCAAGGGAGG+GGG - chr5.2:62888041-62888060 None:intergenic 35.0%
!! CCTTTTTGGAAGGTTAAACT+TGG + chr5.2:62889046-62889065 MS.gene009689:CDS 35.0%
!! GAAGTGTCCCAATGTTTTTA+AGG + chr5.2:62885519-62885538 MS.gene009689:CDS 35.0%
!! GATTTTAACATAAGAGGGGA+GGG + chr5.2:62888539-62888558 MS.gene009689:intron 35.0%
!! GTTTTCTTTCTCTGTTTCTC+TGG - chr5.2:62885731-62885750 None:intergenic 35.0%
!! TATGTTTTGAATAAGAGGGG+AGG + chr5.2:62888611-62888630 MS.gene009689:intron 35.0%
!!! TGAAGTTTTAGGGCAATGAT+AGG - chr5.2:62887109-62887128 None:intergenic 35.0%
AAATCGCTCTCAAAGATGAG+TGG - chr5.2:62886392-62886411 None:intergenic 40.0%
ACAATTCCTTTGCCTTGACT+TGG - chr5.2:62889567-62889586 None:intergenic 40.0%
AGGAATTGTCCAAGGAAAAG+TGG + chr5.2:62889578-62889597 MS.gene009689:CDS 40.0%
AGTTAGACCGAAGTGATTCT+TGG - chr5.2:62889440-62889459 None:intergenic 40.0%
ATAGACGTTTCAACGAGTCA+TGG + chr5.2:62888769-62888788 MS.gene009689:intron 40.0%
ATGTAGAGAGACTGTAGACT+AGG + chr5.2:62887652-62887671 MS.gene009689:intron 40.0%
ATTGATAAGGTTGCTAAGGG+TGG - chr5.2:62889137-62889156 None:intergenic 40.0%
ATTTACCATGTCCCCAACAT+AGG + chr5.2:62886408-62886427 MS.gene009689:intron 40.0%
CCCAACAAAGATTCTTTGAG+AGG + chr5.2:62887250-62887269 MS.gene009689:CDS 40.0%
CCCTTAGCAACCTTATCAAT+AGG + chr5.2:62889137-62889156 MS.gene009689:CDS 40.0%
GATCAAAAGGGGAGATTAGA+AGG + chr5.2:62889834-62889853 MS.gene009689:CDS 40.0%
GGAAATAACAAGCCTCTTAC+CGG + chr5.2:62889812-62889831 MS.gene009689:CDS 40.0%
GGAAGGTTAAACTTGGAAGA+AGG + chr5.2:62889053-62889072 MS.gene009689:CDS 40.0%
TATTTGCCAAGTCAAGGCAA+AGG + chr5.2:62889558-62889577 MS.gene009689:CDS 40.0%
TGACTCCACCTTAGACTTTA+TGG - chr5.2:62887293-62887312 None:intergenic 40.0%
TGATGCCATAAAGTCTAAGG+TGG + chr5.2:62887285-62887304 MS.gene009689:CDS 40.0%
TTCTTAGGAGCTCACACAAT+TGG + chr5.2:62889476-62889495 MS.gene009689:intron 40.0%
! ATTCAAGCATCTTTGAAGGG+AGG - chr5.2:62888691-62888672 None:intergenic 40.0%
! GATCAAGAGCTTTTCAATGG+AGG + chr5.2:62889707-62889726 MS.gene009689:CDS 40.0%
! TATTGATAACAGGGCTGTGA+TGG + chr5.2:62887175-62887194 MS.gene009689:intron 40.0%
! TCAAGCATCTTTGAAGGGAA+GGG + chr5.2:62888674-62888693 MS.gene009689:intron 40.0%
! TCTAATCTCCCCTTTTGATC+CGG - chr5.2:62889834-62889853 None:intergenic 40.0%
! TTCAAGCATCTTTGAAGGGA+AGG + chr5.2:62888673-62888692 MS.gene009689:intron 40.0%
! TTCAAGCATCTTTGAAGGGA+GGG - chr5.2:62888692-62888673 None:intergenic 40.0%
! TTTTCATGTCGTTACGCTAC+TGG + chr5.2:62886224-62886243 MS.gene009689:intron 40.0%
!! TGGAGGATCTACTGATTCAT+TGG + chr5.2:62889724-62889743 MS.gene009689:CDS 40.0%
!! TGTTTTGAATAAGAGGGGAG+GGG + chr5.2:62888613-62888632 MS.gene009689:intron 40.0%
!! TTTTACTTTTCAAGGGAGGG+GGG - chr5.2:62888040-62888059 None:intergenic 40.0%
!!! CTCACTAGTTTTCTAAGTGG+TGG - chr5.2:62885872-62885891 None:intergenic 40.0%
!!! GGTTTGGTGTTTTGAAGTCT+AGG - chr5.2:62889631-62889650 None:intergenic 40.0%
AACAGAATCACGAGCAGCAA+TGG - chr5.2:62887353-62887372 None:intergenic 45.0%
AAGCCTCTTACCGGATCAAA+AGG + chr5.2:62889821-62889840 MS.gene009689:CDS 45.0%
AAGGTTGCTAAGGGTGGAAA+AGG - chr5.2:62889131-62889150 None:intergenic 45.0%
ACTCTCTACTAAGGACATGG+TGG + chr5.2:62889174-62889193 MS.gene009689:CDS 45.0%
ACTGTTTGCATCATTGAGGC+TGG - chr5.2:62889092-62889111 None:intergenic 45.0%
AGACCGAAGTGATTCTTGGT+TGG - chr5.2:62889436-62889455 None:intergenic 45.0%
AGAGACTGTAGACTAGGATG+TGG + chr5.2:62887658-62887677 MS.gene009689:intron 45.0%
AGCAACAGCAGAGTGAACAA+CGG - chr5.2:62885554-62885573 None:intergenic 45.0%
AGCCTCAATGATGCAAACAG+TGG + chr5.2:62889091-62889110 MS.gene009689:CDS 45.0%
AGCCTCTTACCGGATCAAAA+GGG + chr5.2:62889822-62889841 MS.gene009689:CDS 45.0%
AGCTCAAGGACTCTCTACTA+AGG + chr5.2:62889165-62889184 MS.gene009689:CDS 45.0%
AGGACTCTCTACTAAGGACA+TGG + chr5.2:62889171-62889190 MS.gene009689:CDS 45.0%
AGGAGCTCACACAATTGGAA+AGG + chr5.2:62889481-62889500 MS.gene009689:intron 45.0%
AGGTTGCTAAGGGTGGAAAA+GGG - chr5.2:62889130-62889149 None:intergenic 45.0%
ATTCAAGCTTCTCTTAGGGG+AGG + chr5.2:62888569-62888588 MS.gene009689:intron 45.0%
CAAGGCAAAGGAATTGTCCA+AGG + chr5.2:62889570-62889589 MS.gene009689:CDS 45.0%
CACCACTGTTTGCATCATTG+AGG - chr5.2:62889096-62889115 None:intergenic 45.0%
CTCACACAATTGGAAAGGCA+AGG + chr5.2:62889486-62889505 MS.gene009689:CDS 45.0%
GATGACACACCCTCCAATAA+AGG + chr5.2:62887211-62887230 MS.gene009689:CDS 45.0%
GGCATAACATGCAATGTACG+TGG - chr5.2:62887841-62887860 None:intergenic 45.0%
TCTACAGTCTCTCTACATCG+AGG - chr5.2:62887650-62887669 None:intergenic 45.0%
TTCAAGCTTCTCTTAGGGGA+GGG + chr5.2:62888570-62888589 MS.gene009689:intron 45.0%
TTTGTGAAGTCACACGCACA+CGG - chr5.2:62886946-62886965 None:intergenic 45.0%
! TCAAGCATCTTTGAAGGGAG+GGG - chr5.2:62887981-62888000 None:intergenic 45.0%
!!! ACAAAAATTTAATAATTTTT+TGG - chr5.2:62886462-62886481 None:intergenic 5.0%
!!! ACATATTTTTATTTTATTTT+GGG + chr5.2:62888331-62888350 MS.gene009689:intron 5.0%
ACCAACCTATGTTGGGGACA+TGG - chr5.2:62886416-62886435 None:intergenic 50.0%
ACCATGTCCCCAACATAGGT+TGG + chr5.2:62886412-62886431 MS.gene009689:intron 50.0%
ATCAGCACAAGACACCACAC+CGG - chr5.2:62887323-62887342 None:intergenic 50.0%
GACGTTTCAACGAGTCATGG+TGG + chr5.2:62888772-62888791 MS.gene009689:intron 50.0%
GCCTCTTACCGGATCAAAAG+GGG + chr5.2:62889823-62889842 MS.gene009689:CDS 50.0%
GGGAGATTAGAAGGCAATGC+AGG + chr5.2:62889843-62889862 MS.gene009689:CDS 50.0%
GTTGCTAGAGAACCTCGCAT+GGG + chr5.2:62885568-62885587 MS.gene009689:CDS 50.0%
TCAAGCTTCTCTTAGGGGAG+GGG + chr5.2:62888571-62888590 MS.gene009689:intron 50.0%
TGTTGCTAGAGAACCTCGCA+TGG + chr5.2:62885567-62885586 MS.gene009689:CDS 50.0%
TTGCTAAGGGTGGAAAAGGG+AGG - chr5.2:62889127-62889146 None:intergenic 50.0%
! TCCCCTTTTGATCCGGTAAG+AGG - chr5.2:62889827-62889846 None:intergenic 50.0%
!! AAGGACATGGTGGCCTTATC+TGG + chr5.2:62889184-62889203 MS.gene009689:CDS 50.0%
AAGGTGGAGTCAGTATGCCC+CGG + chr5.2:62887301-62887320 MS.gene009689:CDS 55.0%
AGAAGAGATCCTCCCATGCG+AGG - chr5.2:62885583-62885602 None:intergenic 55.0%
CTAAGGGTGGAAAAGGGAGG+TGG - chr5.2:62889124-62889143 None:intergenic 55.0%
GGCATGACATGAAGTCTGCG+TGG - chr5.2:62889347-62889366 None:intergenic 55.0%
TCAGCACAAGACACCACACC+GGG - chr5.2:62887322-62887341 None:intergenic 55.0%
! GCTTGGAGGGCCTTTTTGGA+AGG + chr5.2:62889036-62889055 MS.gene009689:intron 55.0%
! TGCAGCTTGGAGGGCCTTTT+TGG + chr5.2:62889032-62889051 MS.gene009689:intron 55.0%
CAGCACAAGACACCACACCG+GGG - chr5.2:62887321-62887340 None:intergenic 60.0%
GCTAGAGAACCTCGCATGGG+AGG + chr5.2:62885571-62885590 MS.gene009689:CDS 60.0%
GGAGTCAGTATGCCCCGGTG+TGG + chr5.2:62887306-62887325 MS.gene009689:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 62885463 62889877 62885463 ID=MS.gene009689
chr5.2 mRNA 62885463 62889877 62885463 ID=MS.gene009689.t1;Parent=MS.gene009689
chr5.2 exon 62885463 62885633 62885463 ID=MS.gene009689.t1.exon1;Parent=MS.gene009689.t1
chr5.2 CDS 62885463 62885633 62885463 ID=cds.MS.gene009689.t1;Parent=MS.gene009689.t1
chr5.2 exon 62887187 62887378 62887187 ID=MS.gene009689.t1.exon2;Parent=MS.gene009689.t1
chr5.2 CDS 62887187 62887378 62887187 ID=cds.MS.gene009689.t1;Parent=MS.gene009689.t1
chr5.2 exon 62889037 62889205 62889037 ID=MS.gene009689.t1.exon3;Parent=MS.gene009689.t1
chr5.2 CDS 62889037 62889205 62889037 ID=cds.MS.gene009689.t1;Parent=MS.gene009689.t1
chr5.2 exon 62889483 62889877 62889483 ID=MS.gene009689.t1.exon4;Parent=MS.gene009689.t1
chr5.2 CDS 62889483 62889877 62889483 ID=cds.MS.gene009689.t1;Parent=MS.gene009689.t1
Gene Sequence

>MS.gene009689

ATGTTTTTTCTTATAGATGGTTCTTTTTCTCAACTATCTGAAAATTTCTATGCTAAGAAGTGTCCCAATGTTTTTAAGGCTGTAAATTCCGTTGTTCACTCTGCTGTTGCTAGAGAACCTCGCATGGGAGGATCTCTTCTTCGCCTTCATTTTCATGACTGCTTTGTTAATGTAAATTAATCTTCAAACTATGTTCTTATATATGTTTTTCGTTAGTTATATATTGTTATATACCATTGCAATGATCAAATACTAAGAAAACTTGCCAGAGAAACAGAGAAAGAAAACATTAATATTTTCTTTAAATCCGTCACAAATTTAATGATGATGAAATTAGAGAAATATTTCTTTTTTTTTTTGTCACAATTTTTTTTTTATTATTATATACCATTTCTATATTATATATCCACCACTTAGAAAACTAGTGAGAAAAATTTAGAGAAGAAAAACATGAACTTTTTCTTTAAATCCAGCACTAAATAGTGTGATGATAGTATTAGAAAGTGATTTCATTTCTTCCTCAATAAATTTTGGCGCTAATTTATTTTTTCTAATAGTGATATATAATCAATATTATTATTTTTTTGACAAATAATCAATATTATTATTTATTCGCCAATAGTTCATATGAAGATTTCAAATGTAAAAATAATAATATTAATATAGATAATAGATTGAATATATTATTTTTTGGTAGTTTGATAATGAATTGAATATGATCAGTGAGTCTTATTGAGTGAATTGAATAGGGTCATATACACTTTTCATGTCGTTACGCTACTGGACTATTTATACTTTATTTTTATACTGTTTCTATCTCTTTCAAAGAGTCTTATTGAGGGACGTAACTATTGCAATAATGGAACATTTCATGCATAATTGAAAAAGAAGTAAAATGAACTGTCTATTGCTTGCATGATTATGCACCACTCATCTTTGAGAGCGATTTACCATGTCCCCAACATAGGTTGGTGAATATATTAAAAAAAAAATTAGCCAAAAAATTATTAAATTTTTGTAGTTTGAATGTGCATGAATATATGTACTTTTAAATTCTTGAGATATGTGTTTTTTTTTGGCAAGTACCCTTGTAATTTTCCCATGTTGTGAGTTAAATACTCGTTGTACTTATCTCCTTAATCTTTATCTAATAAATTTGGCTGTTCAAAAGAAATTTCTTTTAGAAACATGAAAGTTTTTTAGTAGTAATGGAAAACAACAATACTTTTTTTTAGAGGGGAAAACAACCGTACGTACAAATTAATCTTTTATTTTTTGTCAAAAAGATTTACTGTTTATTTGCATTGTGAATAAAGCAAAAGGCAAATTCCAAAAATGCCTTTTTGAAGCTTGATGTTTAAACTTGTTTAAACTGTAAGTGTGCTAATAAATAATTTATATTCAATTTTGACGTTATTTATTTTAAACATACACCGCATATTAGTTAGACATGCGTTACAAACTATTTTACAAATTTAAACCGTGTGCGTGTGACTTCACAAATTCAACCACATTTAGCATGTCTGATTTTTGTTTTGGACTCTAAAAATAATAAGCTTAAAATATGAATCATATGATTTAAATGTGGTTGACTACACATTATCGCATGATTTTGAATTGTAAAGAACTCAAATCCTTATATACCTATCATTGCCCTAAAACTTCATAAACATGATTTTGGTGAACTTACTTATCATAAATCACTTTTTGCTTATTGATAACAGGGCTGTGATGGATCAGTGCTACTTGATGACACACCCTCCAATAAAGGAGAGAAGAATGCACTTCCCAACAAAGATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGTCAGTATGCCCCGGTGTGGTGTCTTGTGCTGATATTCTAGCCATTGCTGCTCGTGATTCTGTTGTAAATGTGAGTACAAAATCAATATGTTAAACACTGAATTTTTAGTAATTTTTCAATTATAAATTCACTACTAGAAGAAGTTTAATAATCAAGAAAAATTAGAGACGTAAAAAGTAAAACTGATCTATAATTTGTAAAATGGGCTTTATTATTTTTTTTTTGTTGAGAAATTATATATTTGCTTCAGTAAATTAGTTGCTTAAATATAATGTTTACAAGTCTTGGTACCAGAAAATTATCAGCAAAAAATCTAAAATATTTAAATTCAAAGCAGCCTCGATGTAGAGAGACTGTAGACTAGGATGTGGTCGAATTTGATAGTTGCATAAATTATATTATCCAACAAGTTATATGCACATATTAGTTTATTTTTATTGAAGAGATTTTAATGGAATAGTCATAGATACGAAGTTATATCATATATTTACAATAATAAAATATAGATCAAGTGTGACGTTTAAACAACCACGTACATTGCATGTTATGCCTAATTTTCGTTTTGTTCTAACTCTAAGTGACTTTTTTAATATAAAAGACCAACACATATTTATGAATTAATTATTGCTTAATAATAGTTGACAATAATTTATAGAGTAAATTACACTCCCCTCCCTTCAAAGATGCTTGAATTACACTTCTCTTCCCTCTTATGTTAAAATATACACCCCCCTCCCTTGAAAAGTAAAATTTATACTCCCCACCCTTATATGATGCTTAAATTACAACCCCCTCCCTTAATAATTAAATATGCGCTACACTTTAATCTATTTTAACATAAATAAATATGTTTAAGATATATATTAATTTTGAACCACCATTTAAGAAAAAAATTAATTCATTTCTATATAATTTAAATGTAAATGATAAATAAATTTAAATATTTTGCTATTGATTTTATAATTTAGAGTATAAAATTAACTTTTAAATAACCATGCTTTATTGTATTTAGTAATTTTTCACATATTTTTATTTTATTTTGGGATGTTTCATATTTTATAATAGGGTTTAAAACTACATGTTATGAATAAAAAATAACGAAAAATATGTATTCAATTTTTTATTATATTAAAATAGACCCGCAATACTATTTTTTTCGAAATGTGTTAGATTATTTTTTTTTTGCTAGATTATTAGAAATAAAAAAAATATTGAGGGAGTAAAGTGTAGATTTTAACATAAGAGGGGAGGGGAATGTAATTCAAGCTTCTCTTAGGGGAGGGGAGTGAAAATTTTTCTAATATGTTTTGAATAAGAGGGGAGGGGAGTGTATATTTTAACATAAGAGGGGAGGGGAGTGTAATTCAAGCATCTTTGAAGGGAAGGGAGTATAATTTACTCTAATTTATACTAATAATAATTTCGAAGAATCTATTTCGTTTGGCAATGGAAGTGTCAAATAGACGTTTCAACGAGTCATGGTGGTGAAAAAAAAAAGAGAAGTTGGAATTCTTAGCGCCGCGATTTTGCTAAACATAATGTCTTACATAAAATAGATATCATAACGATACATACAACTGTTTAATTAATCTAACACTCATACATATAGCTGCAGTATAATTTATCAAAATTTAAAAACCCTAATTTCTTTTCTTCTAATAAATGCTTTTATTTTCATTCTATCATATTATTTTTTAAATTTATTTTTATTCTATCATATTTTGCAGCTTGGAGGGCCTTTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAAACAGCCAGCCTCAATGATGCAAACAGTGGTGTAATTCCACCTCCCTTTTCCACCCTTAGCAACCTTATCAATAGGTTTAAAGCTCAAGGACTCTCTACTAAGGACATGGTGGCCTTATCTGGTACATGTCTTTTTCCTATTGTGTCTAATTAAAACTTTTTTCTTCTTCTTACTTCTATTATTATGACACTATTATTAGTTTTTATTTTGCTTGATATATATCACACATTTGGTTGACTAGGATGTGATGTTTAAACAACCACGCAGACTTCATGTCATGCCTAATTTTCGTTTTGTTCTAAGTGACTTCTAATAAAAAAAGAACAATGAAACGAAAAACATGTTTATCCAACCAAGAATCACTTCGGTCTAACTATTTAATTCTTTGTGCTTCTTAGGAGCTCACACAATTGGAAAGGCAAGGTGTACCGTTTATAGAGATCGTATTTACAGTAATACAAATATTGATAGTTTATTTGCCAAGTCAAGGCAAAGGAATTGTCCAAGGAAAAGTGGTACAATAAAAGACAACAATGTAGCTGTCCTAGACTTCAAAACACCAAACCATTTTGATAACTTATACTACAAGAATCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACTGATTCATTGGTTAAAAGTTATAGCAATAATCAAAATGCATTTGAATCAGATTTTGCTACTGCAATGATTAAGATGGGAAATAACAAGCCTCTTACCGGATCAAAAGGGGAGATTAGAAGGCAATGCAGGAGAGCCAATTAA
Protein sequence

>MS.gene009689.t1

MFFLIDGSFSQLSENFYAKKCPNVFKAVNSVVHSAVAREPRMGGSLLRLHFHDCFVNGCDGSVLLDDTPSNKGEKNALPNKDSLRGFEVIDAIKSKVESVCPGVVSCADILAIAARDSVVNLGGPFWKVKLGRRDSKTASLNDANSGVIPPPFSTLSNLINRFKAQGLSTKDMVALSGAHTIGKARCTVYRDRIYSNTNIDSLFAKSRQRNCPRKSGTIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQNAFESDFATAMIKMGNNKPLTGSKGEIRRQCRRAN