Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38511.t1 | XP_013460386.1 | 94.4 | 252 | 14 | 0 | 6 | 257 | 69 | 320 | 1.60E-131 | 478.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38511.t1 | A7NY33 | 72.2 | 252 | 69 | 1 | 6 | 257 | 71 | 321 | 2.8e-100 | 366.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38511.t1 | A0A072UXA0 | 94.4 | 252 | 14 | 0 | 6 | 257 | 69 | 320 | 1.1e-131 | 478.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene38511 | 0.824325 | 8.58E-54 | -1.69E-46 |
| MS.gene049488 | MS.gene38511 | 0.805848 | 1.10E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene38511 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene38511 | -0.849692 | 2.75E-60 | -1.69E-46 |
| MS.gene050464 | MS.gene38511 | 0.831728 | 1.42E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene38511 | 0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene38511 | 0.856414 | 3.27E-62 | -1.69E-46 |
| MS.gene051525 | MS.gene38511 | 0.837253 | 5.80E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene38511 | 0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene38511 | 0.82266 | 2.10E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene38511 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene38511 | -0.826528 | 2.58E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene38511 | 0.85087 | 1.28E-60 | -1.69E-46 |
| MS.gene052134 | MS.gene38511 | 0.817171 | 3.79E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene38511 | 0.830405 | 2.99E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene38511 | 0.83581 | 1.35E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene38511 | 0.819992 | 8.68E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene38511 | 0.847482 | 1.12E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene38511 | 0.831088 | 2.04E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene38511 | 0.827189 | 1.79E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene38511 | 0.821342 | 4.25E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene38511 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene38511 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene38511 | 0.80772 | 4.40E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene38511 | 0.849454 | 3.20E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene38511 | 0.855281 | 7.01E-62 | -1.69E-46 |
| MS.gene055859 | MS.gene38511 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene38511 | 0.832872 | 7.38E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene38511 | 0.810235 | 1.27E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene38511 | 0.814963 | 1.18E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene38511 | 0.823977 | 1.04E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene38511 | -0.814218 | 1.72E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene38511 | 0.810339 | 1.21E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene38511 | 0.808787 | 2.61E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene38511 | 0.813417 | 2.59E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene38511 | 0.812619 | 3.87E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene38511 | 0.813058 | 3.10E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene38511 | 0.808245 | 3.40E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene38511 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene057833 | MS.gene38511 | 0.80891 | 2.45E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene38511 | 0.801096 | 1.06E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene38511 | 0.819371 | 1.20E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene38511 | 0.800212 | 1.60E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene38511 | 0.821315 | 4.31E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene38511 | 0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene38511 | 0.831155 | 1.96E-55 | -1.69E-46 |
| MS.gene059082 | MS.gene38511 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene38511 | 0.831408 | 1.70E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene38511 | 0.843493 | 1.35E-58 | -1.69E-46 |
| MS.gene059462 | MS.gene38511 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene38511 | 0.817117 | 3.89E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene38511 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene38511 | 0.817144 | 3.84E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene38511 | 0.821006 | 5.08E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene38511 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene38511 | 0.828154 | 1.05E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene38511 | 0.831157 | 1.96E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene38511 | -0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene38511 | 0.806463 | 8.13E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene38511 | 0.816211 | 6.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062216 | MS.gene38511 | PPI |
| MS.gene38511 | MS.gene31055 | PPI |
| MS.gene38511 | MS.gene049374 | PPI |
| MS.gene38511 | MS.gene96335 | PPI |
| MS.gene070268 | MS.gene38511 | PPI |
| MS.gene012362 | MS.gene38511 | PPI |
| MS.gene38511 | MS.gene57129 | PPI |
| MS.gene38511 | MS.gene013399 | PPI |
| MS.gene38511 | MS.gene31053 | PPI |
| MS.gene38511 | MS.gene004925 | PPI |
| MS.gene06498 | MS.gene38511 | PPI |
| MS.gene073297 | MS.gene38511 | PPI |
| MS.gene31054 | MS.gene38511 | PPI |
| MS.gene38511 | MS.gene29725 | PPI |
| MS.gene38511 | MS.gene06499 | PPI |
| MS.gene54705 | MS.gene38511 | PPI |
| MS.gene38511 | MS.gene013400 | PPI |
| MS.gene38511 | MS.gene049373 | PPI |
| MS.gene06500 | MS.gene38511 | PPI |
| MS.gene049372 | MS.gene38511 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38511.t1 | MTR_3g466200 | 94.444 | 252 | 14 | 0 | 6 | 257 | 69 | 320 | 1.66e-178 | 493 |
| MS.gene38511.t1 | MTR_5g074970 | 73.913 | 253 | 65 | 1 | 6 | 257 | 74 | 326 | 2.54e-135 | 384 |
| MS.gene38511.t1 | MTR_5g083860 | 71.825 | 252 | 70 | 1 | 6 | 257 | 75 | 325 | 3.17e-130 | 371 |
| MS.gene38511.t1 | MTR_3g094650 | 68.651 | 252 | 78 | 1 | 6 | 257 | 72 | 322 | 9.64e-123 | 352 |
| MS.gene38511.t1 | MTR_3g094670 | 69.841 | 252 | 75 | 1 | 6 | 257 | 72 | 322 | 9.58e-122 | 350 |
| MS.gene38511.t1 | MTR_3g094630 | 69.048 | 252 | 77 | 1 | 6 | 257 | 72 | 322 | 3.89e-117 | 338 |
| MS.gene38511.t1 | MTR_2g084090 | 61.508 | 252 | 95 | 2 | 6 | 257 | 69 | 318 | 2.34e-108 | 316 |
| MS.gene38511.t1 | MTR_2g084080 | 59.921 | 252 | 98 | 2 | 6 | 257 | 69 | 317 | 1.92e-107 | 313 |
| MS.gene38511.t1 | MTR_3g072190 | 62.698 | 252 | 91 | 2 | 6 | 257 | 3 | 251 | 2.25e-107 | 311 |
| MS.gene38511.t1 | MTR_4g029200 | 59.127 | 252 | 100 | 2 | 6 | 257 | 90 | 338 | 4.06e-107 | 313 |
| MS.gene38511.t1 | MTR_3g072190 | 62.698 | 252 | 91 | 2 | 6 | 257 | 70 | 318 | 2.89e-106 | 310 |
| MS.gene38511.t1 | MTR_2g084110 | 59.524 | 252 | 99 | 2 | 6 | 257 | 69 | 317 | 2.13e-105 | 308 |
| MS.gene38511.t1 | MTR_2g084020 | 60.079 | 253 | 97 | 4 | 6 | 257 | 69 | 318 | 7.47e-104 | 304 |
| MS.gene38511.t1 | MTR_4g029190 | 57.937 | 252 | 105 | 1 | 6 | 257 | 90 | 340 | 2.76e-103 | 303 |
| MS.gene38511.t1 | MTR_4g083710 | 60.784 | 255 | 96 | 4 | 6 | 257 | 71 | 324 | 4.99e-103 | 302 |
| MS.gene38511.t1 | MTR_7g072510 | 57.540 | 252 | 104 | 2 | 6 | 257 | 64 | 312 | 1.12e-102 | 301 |
| MS.gene38511.t1 | MTR_2g084010 | 58.103 | 253 | 102 | 3 | 6 | 257 | 69 | 318 | 2.08e-100 | 295 |
| MS.gene38511.t1 | MTR_7g072480 | 58.333 | 252 | 102 | 2 | 6 | 257 | 68 | 316 | 2.27e-100 | 295 |
| MS.gene38511.t1 | MTR_4g074995 | 60.392 | 255 | 84 | 4 | 6 | 257 | 68 | 308 | 2.70e-100 | 295 |
| MS.gene38511.t1 | MTR_5g074860 | 59.055 | 254 | 95 | 6 | 6 | 254 | 73 | 322 | 1.90e-99 | 293 |
| MS.gene38511.t1 | MTR_4g029170 | 58.498 | 253 | 102 | 2 | 6 | 257 | 71 | 321 | 6.86e-97 | 286 |
| MS.gene38511.t1 | MTR_2g084000 | 56.126 | 253 | 107 | 4 | 6 | 257 | 70 | 319 | 1.04e-96 | 286 |
| MS.gene38511.t1 | MTR_7g026990 | 55.952 | 252 | 107 | 3 | 6 | 257 | 75 | 322 | 1.00e-95 | 284 |
| MS.gene38511.t1 | MTR_4g029180 | 58.103 | 253 | 103 | 2 | 6 | 257 | 71 | 321 | 3.55e-95 | 282 |
| MS.gene38511.t1 | MTR_3g466180 | 59.524 | 252 | 99 | 2 | 6 | 257 | 75 | 323 | 1.05e-92 | 276 |
| MS.gene38511.t1 | MTR_4g074990 | 56.299 | 254 | 93 | 4 | 6 | 257 | 68 | 305 | 2.16e-91 | 272 |
| MS.gene38511.t1 | MTR_5g074740 | 56.420 | 257 | 103 | 7 | 6 | 257 | 69 | 321 | 1.91e-90 | 270 |
| MS.gene38511.t1 | MTR_5g074760 | 56.031 | 257 | 104 | 7 | 6 | 257 | 69 | 321 | 4.36e-90 | 270 |
| MS.gene38511.t1 | MTR_1g115900 | 53.725 | 255 | 111 | 4 | 6 | 257 | 71 | 321 | 1.05e-88 | 266 |
| MS.gene38511.t1 | MTR_5g074710 | 55.253 | 257 | 106 | 7 | 6 | 257 | 69 | 321 | 2.17e-88 | 265 |
| MS.gene38511.t1 | MTR_3g467600 | 52.918 | 257 | 113 | 6 | 6 | 257 | 71 | 324 | 7.71e-87 | 261 |
| MS.gene38511.t1 | MTR_8g076820 | 50.000 | 260 | 119 | 4 | 6 | 257 | 74 | 330 | 1.79e-83 | 253 |
| MS.gene38511.t1 | MTR_5g021060 | 47.692 | 260 | 125 | 4 | 6 | 257 | 74 | 330 | 3.31e-81 | 247 |
| MS.gene38511.t1 | MTR_2g040000 | 51.698 | 265 | 109 | 6 | 6 | 257 | 73 | 331 | 9.78e-81 | 246 |
| MS.gene38511.t1 | MTR_7g093370 | 49.618 | 262 | 119 | 6 | 6 | 257 | 113 | 371 | 1.98e-80 | 246 |
| MS.gene38511.t1 | MTR_1g022970 | 50.192 | 261 | 118 | 4 | 6 | 257 | 90 | 347 | 5.72e-80 | 244 |
| MS.gene38511.t1 | MTR_5g014100 | 49.434 | 265 | 118 | 4 | 6 | 257 | 70 | 331 | 1.10e-79 | 243 |
| MS.gene38511.t1 | MTR_2g029860 | 49.042 | 261 | 121 | 4 | 6 | 257 | 73 | 330 | 4.28e-79 | 242 |
| MS.gene38511.t1 | MTR_2g028980 | 50.575 | 261 | 117 | 5 | 6 | 257 | 73 | 330 | 4.64e-79 | 242 |
| MS.gene38511.t1 | MTR_1g054205 | 49.618 | 262 | 119 | 6 | 6 | 257 | 68 | 326 | 5.49e-79 | 241 |
| MS.gene38511.t1 | MTR_2g029830 | 47.692 | 260 | 124 | 4 | 7 | 257 | 5 | 261 | 2.32e-78 | 238 |
| MS.gene38511.t1 | MTR_4g074980 | 50.593 | 253 | 97 | 4 | 6 | 257 | 69 | 294 | 2.48e-78 | 238 |
| MS.gene38511.t1 | MTR_4g122640 | 48.828 | 256 | 126 | 3 | 6 | 257 | 82 | 336 | 8.86e-78 | 238 |
| MS.gene38511.t1 | MTR_5g049280 | 47.940 | 267 | 118 | 8 | 6 | 257 | 77 | 337 | 9.72e-78 | 238 |
| MS.gene38511.t1 | MTR_2g029750 | 49.425 | 261 | 120 | 5 | 6 | 257 | 73 | 330 | 2.16e-77 | 238 |
| MS.gene38511.t1 | MTR_2g029830 | 47.876 | 259 | 123 | 4 | 8 | 257 | 74 | 329 | 2.23e-77 | 238 |
| MS.gene38511.t1 | MTR_2g029800 | 49.807 | 259 | 118 | 4 | 8 | 257 | 75 | 330 | 7.71e-77 | 236 |
| MS.gene38511.t1 | MTR_4g125940 | 49.430 | 263 | 117 | 6 | 6 | 257 | 17 | 274 | 2.77e-76 | 233 |
| MS.gene38511.t1 | MTR_2g029850 | 49.042 | 261 | 121 | 4 | 6 | 257 | 73 | 330 | 4.02e-76 | 235 |
| MS.gene38511.t1 | MTR_5g017850 | 46.718 | 259 | 128 | 3 | 6 | 257 | 71 | 326 | 5.62e-76 | 233 |
| MS.gene38511.t1 | MTR_2g029815 | 47.510 | 261 | 125 | 4 | 6 | 257 | 73 | 330 | 1.64e-75 | 233 |
| MS.gene38511.t1 | MTR_4g125940 | 49.430 | 263 | 117 | 6 | 6 | 257 | 72 | 329 | 3.44e-75 | 232 |
| MS.gene38511.t1 | MTR_2g029730 | 46.743 | 261 | 127 | 4 | 6 | 257 | 69 | 326 | 4.18e-75 | 232 |
| MS.gene38511.t1 | MTR_5g017860 | 45.946 | 259 | 130 | 3 | 6 | 257 | 71 | 326 | 7.51e-75 | 231 |
| MS.gene38511.t1 | MTR_4g031140 | 46.718 | 259 | 125 | 5 | 6 | 257 | 72 | 324 | 3.05e-74 | 229 |
| MS.gene38511.t1 | MTR_2g029820 | 47.126 | 261 | 126 | 4 | 6 | 257 | 73 | 330 | 8.56e-74 | 229 |
| MS.gene38511.t1 | MTR_2g029560 | 45.211 | 261 | 131 | 5 | 6 | 257 | 68 | 325 | 2.05e-73 | 228 |
| MS.gene38511.t1 | MTR_2g029740 | 47.126 | 261 | 126 | 5 | 6 | 257 | 73 | 330 | 3.28e-73 | 228 |
| MS.gene38511.t1 | MTR_4g074980 | 60.215 | 186 | 71 | 3 | 6 | 189 | 69 | 253 | 1.45e-72 | 222 |
| MS.gene38511.t1 | MTR_5g074860 | 49.213 | 254 | 81 | 8 | 6 | 254 | 73 | 283 | 1.78e-71 | 221 |
| MS.gene38511.t1 | MTR_4g030890 | 45.560 | 259 | 128 | 5 | 6 | 257 | 144 | 396 | 3.70e-71 | 224 |
| MS.gene38511.t1 | MTR_2g029910 | 45.211 | 261 | 132 | 4 | 6 | 257 | 74 | 332 | 5.52e-70 | 219 |
| MS.gene38511.t1 | MTR_0155s0040 | 43.478 | 253 | 134 | 5 | 6 | 257 | 71 | 315 | 9.08e-66 | 207 |
| MS.gene38511.t1 | MTR_1g077000 | 45.238 | 252 | 131 | 4 | 6 | 257 | 83 | 327 | 1.07e-65 | 207 |
| MS.gene38511.t1 | MTR_2g088770 | 44.061 | 261 | 132 | 7 | 6 | 257 | 70 | 325 | 2.51e-64 | 204 |
| MS.gene38511.t1 | MTR_1g101830 | 40.927 | 259 | 139 | 5 | 6 | 257 | 71 | 322 | 4.20e-64 | 203 |
| MS.gene38511.t1 | MTR_5g074700 | 50.442 | 226 | 93 | 8 | 35 | 257 | 5 | 214 | 2.20e-63 | 197 |
| MS.gene38511.t1 | MTR_3g072210 | 55.851 | 188 | 78 | 4 | 72 | 257 | 54 | 238 | 4.82e-62 | 195 |
| MS.gene38511.t1 | MTR_3g092990 | 41.538 | 260 | 141 | 4 | 6 | 257 | 70 | 326 | 5.40e-61 | 195 |
| MS.gene38511.t1 | MTR_3g092990 | 41.860 | 258 | 139 | 4 | 8 | 257 | 61 | 315 | 9.85e-61 | 194 |
| MS.gene38511.t1 | MTR_4g046713 | 41.762 | 261 | 138 | 6 | 6 | 257 | 71 | 326 | 1.00e-60 | 194 |
| MS.gene38511.t1 | MTR_1g086320 | 40.230 | 261 | 146 | 3 | 6 | 257 | 74 | 333 | 2.52e-59 | 191 |
| MS.gene38511.t1 | MTR_2g008710 | 42.205 | 263 | 133 | 6 | 6 | 257 | 71 | 325 | 4.54e-59 | 190 |
| MS.gene38511.t1 | MTR_5g022870 | 40.541 | 259 | 138 | 7 | 6 | 257 | 67 | 316 | 2.47e-58 | 188 |
| MS.gene38511.t1 | MTR_4g133800 | 39.615 | 260 | 138 | 6 | 6 | 257 | 85 | 333 | 3.13e-58 | 188 |
| MS.gene38511.t1 | MTR_1g025980 | 41.176 | 255 | 135 | 6 | 6 | 253 | 68 | 314 | 2.04e-57 | 186 |
| MS.gene38511.t1 | MTR_7g072490 | 42.623 | 244 | 83 | 2 | 7 | 250 | 1 | 187 | 2.71e-57 | 182 |
| MS.gene38511.t1 | MTR_8g075100 | 40.154 | 259 | 139 | 7 | 6 | 257 | 70 | 319 | 5.97e-57 | 184 |
| MS.gene38511.t1 | MTR_6g043280 | 44.314 | 255 | 132 | 6 | 6 | 257 | 85 | 332 | 6.47e-57 | 185 |
| MS.gene38511.t1 | MTR_7g029030 | 40.076 | 262 | 137 | 6 | 6 | 257 | 69 | 320 | 7.06e-57 | 184 |
| MS.gene38511.t1 | MTR_2g437770 | 39.231 | 260 | 138 | 6 | 6 | 257 | 94 | 341 | 3.50e-56 | 183 |
| MS.gene38511.t1 | MTR_1g086490 | 39.405 | 269 | 144 | 5 | 6 | 257 | 74 | 340 | 2.14e-55 | 181 |
| MS.gene38511.t1 | MTR_2g008730 | 42.449 | 245 | 125 | 5 | 24 | 257 | 62 | 301 | 2.14e-55 | 180 |
| MS.gene38511.t1 | MTR_4g114210 | 41.667 | 264 | 134 | 7 | 6 | 257 | 65 | 320 | 4.96e-55 | 180 |
| MS.gene38511.t1 | MTR_7g086820 | 39.130 | 253 | 149 | 3 | 6 | 257 | 64 | 312 | 2.85e-53 | 175 |
| MS.gene38511.t1 | MTR_1g038680 | 39.313 | 262 | 147 | 5 | 6 | 257 | 73 | 332 | 5.51e-53 | 175 |
| MS.gene38511.t1 | MTR_7g086870 | 39.683 | 252 | 146 | 4 | 6 | 257 | 66 | 311 | 1.53e-52 | 173 |
| MS.gene38511.t1 | MTR_1g090760 | 37.692 | 260 | 149 | 5 | 8 | 257 | 74 | 330 | 7.21e-52 | 172 |
| MS.gene38511.t1 | MTR_4g132490 | 35.659 | 258 | 159 | 3 | 5 | 257 | 72 | 327 | 1.90e-51 | 171 |
| MS.gene38511.t1 | MTR_1g066380 | 35.686 | 255 | 159 | 4 | 6 | 257 | 3 | 255 | 4.09e-51 | 167 |
| MS.gene38511.t1 | MTR_4g087965 | 41.538 | 260 | 137 | 7 | 6 | 253 | 86 | 342 | 7.06e-51 | 170 |
| MS.gene38511.t1 | MTR_2g077990 | 36.458 | 288 | 144 | 7 | 6 | 256 | 120 | 405 | 9.68e-51 | 171 |
| MS.gene38511.t1 | MTR_1g066710 | 35.686 | 255 | 159 | 4 | 6 | 257 | 71 | 323 | 1.23e-50 | 168 |
| MS.gene38511.t1 | MTR_6g027440 | 38.189 | 254 | 151 | 4 | 6 | 257 | 65 | 314 | 3.22e-50 | 167 |
| MS.gene38511.t1 | MTR_5g016010 | 38.846 | 260 | 142 | 8 | 6 | 253 | 71 | 325 | 4.55e-50 | 167 |
| MS.gene38511.t1 | MTR_2g067440 | 35.336 | 283 | 145 | 7 | 6 | 253 | 104 | 383 | 5.43e-50 | 169 |
| MS.gene38511.t1 | MTR_8g062780 | 38.931 | 262 | 142 | 4 | 8 | 257 | 69 | 324 | 7.24e-50 | 167 |
| MS.gene38511.t1 | MTR_4g127670 | 40.458 | 262 | 132 | 9 | 6 | 253 | 68 | 319 | 3.57e-49 | 164 |
| MS.gene38511.t1 | MTR_1g066380 | 34.902 | 255 | 161 | 4 | 6 | 257 | 71 | 323 | 5.45e-49 | 164 |
| MS.gene38511.t1 | MTR_2g078610 | 35.417 | 288 | 147 | 7 | 6 | 256 | 120 | 405 | 7.04e-49 | 166 |
| MS.gene38511.t1 | MTR_6g043460 | 39.370 | 254 | 145 | 5 | 7 | 257 | 81 | 328 | 2.14e-48 | 163 |
| MS.gene38511.t1 | MTR_6g043240 | 39.216 | 255 | 143 | 6 | 6 | 257 | 86 | 331 | 3.24e-48 | 163 |
| MS.gene38511.t1 | MTR_0286s0010 | 36.576 | 257 | 153 | 5 | 8 | 257 | 81 | 334 | 7.32e-48 | 161 |
| MS.gene38511.t1 | MTR_6g008075 | 36.576 | 257 | 153 | 5 | 8 | 257 | 81 | 334 | 7.32e-48 | 161 |
| MS.gene38511.t1 | MTR_1g009750 | 39.015 | 264 | 143 | 9 | 6 | 257 | 71 | 328 | 7.34e-48 | 161 |
| MS.gene38511.t1 | MTR_1g066640 | 35.294 | 255 | 160 | 4 | 6 | 257 | 71 | 323 | 8.09e-48 | 161 |
| MS.gene38511.t1 | MTR_1g066680 | 34.118 | 255 | 163 | 4 | 6 | 257 | 70 | 322 | 8.23e-48 | 161 |
| MS.gene38511.t1 | MTR_2g099175 | 33.206 | 262 | 159 | 4 | 6 | 257 | 80 | 335 | 1.79e-46 | 158 |
| MS.gene38511.t1 | MTR_7g107520 | 36.154 | 260 | 150 | 7 | 6 | 257 | 69 | 320 | 4.67e-46 | 156 |
| MS.gene38511.t1 | MTR_0147s0010 | 34.538 | 249 | 136 | 4 | 30 | 253 | 132 | 378 | 1.46e-45 | 157 |
| MS.gene38511.t1 | MTR_2g008160 | 37.121 | 264 | 146 | 7 | 6 | 257 | 68 | 323 | 5.20e-45 | 154 |
| MS.gene38511.t1 | MTR_4g095450 | 36.434 | 258 | 152 | 7 | 6 | 256 | 71 | 323 | 9.87e-45 | 153 |
| MS.gene38511.t1 | MTR_2g078280 | 35.273 | 275 | 139 | 7 | 6 | 243 | 120 | 392 | 1.82e-44 | 154 |
| MS.gene38511.t1 | MTR_2g067450 | 38.202 | 267 | 132 | 11 | 6 | 253 | 54 | 306 | 1.83e-44 | 152 |
| MS.gene38511.t1 | MTR_5g033470 | 35.385 | 260 | 157 | 5 | 8 | 257 | 119 | 377 | 2.59e-44 | 153 |
| MS.gene38511.t1 | MTR_4g132110 | 33.865 | 251 | 161 | 4 | 6 | 253 | 76 | 324 | 1.87e-43 | 150 |
| MS.gene38511.t1 | MTR_3g105790 | 33.716 | 261 | 157 | 4 | 6 | 257 | 69 | 322 | 5.18e-42 | 146 |
| MS.gene38511.t1 | MTR_4g132110 | 33.203 | 256 | 161 | 5 | 6 | 253 | 76 | 329 | 3.35e-41 | 144 |
| MS.gene38511.t1 | MTR_3g105790 | 34.874 | 238 | 143 | 3 | 29 | 257 | 12 | 246 | 5.52e-40 | 139 |
| MS.gene38511.t1 | MTR_2g029880 | 39.896 | 193 | 94 | 4 | 74 | 257 | 9 | 188 | 9.33e-39 | 134 |
| MS.gene38511.t1 | MTR_1g009750 | 37.308 | 260 | 136 | 9 | 6 | 257 | 71 | 311 | 6.77e-38 | 135 |
| MS.gene38511.t1 | MTR_2g008160 | 34.884 | 258 | 125 | 8 | 6 | 257 | 68 | 288 | 1.49e-34 | 125 |
| MS.gene38511.t1 | MTR_2g008160 | 45.669 | 127 | 64 | 3 | 6 | 132 | 68 | 189 | 3.07e-28 | 107 |
| MS.gene38511.t1 | MTR_2g077980 | 29.348 | 276 | 149 | 8 | 24 | 256 | 11 | 283 | 2.22e-27 | 107 |
| MS.gene38511.t1 | MTR_5g074770 | 52.083 | 96 | 43 | 2 | 161 | 254 | 12 | 106 | 3.67e-27 | 101 |
| MS.gene38511.t1 | MTR_2g078560 | 30.973 | 226 | 119 | 5 | 67 | 256 | 95 | 319 | 9.16e-27 | 106 |
| MS.gene38511.t1 | MTR_3g072260 | 73.846 | 65 | 17 | 0 | 6 | 70 | 70 | 134 | 1.81e-25 | 98.2 |
| MS.gene38511.t1 | MTR_7g086790 | 42.975 | 121 | 64 | 2 | 9 | 129 | 17 | 132 | 3.00e-23 | 94.0 |
| MS.gene38511.t1 | MTR_4g031040 | 36.095 | 169 | 68 | 5 | 23 | 191 | 3 | 131 | 1.15e-22 | 90.5 |
| MS.gene38511.t1 | MTR_5g058120 | 34.839 | 155 | 95 | 2 | 99 | 253 | 7 | 155 | 3.72e-22 | 92.4 |
| MS.gene38511.t1 | MTR_3g462850 | 37.671 | 146 | 71 | 7 | 127 | 257 | 9 | 149 | 4.21e-20 | 84.3 |
| MS.gene38511.t1 | MTR_6g048160 | 58.209 | 67 | 24 | 2 | 6 | 72 | 27 | 89 | 6.49e-17 | 73.9 |
| MS.gene38511.t1 | MTR_1g098320 | 46.053 | 76 | 41 | 0 | 178 | 253 | 45 | 120 | 5.95e-16 | 73.2 |
| MS.gene38511.t1 | MTR_3g107060 | 27.854 | 219 | 100 | 7 | 29 | 236 | 139 | 310 | 1.31e-15 | 75.5 |
| MS.gene38511.t1 | MTR_4g114220 | 57.812 | 64 | 17 | 2 | 6 | 69 | 47 | 100 | 4.29e-14 | 68.2 |
| MS.gene38511.t1 | MTR_7g086785 | 42.466 | 73 | 41 | 1 | 7 | 79 | 3 | 74 | 7.03e-12 | 62.0 |
| MS.gene38511.t1 | MTR_6g071110 | 37.736 | 106 | 52 | 3 | 18 | 123 | 70 | 161 | 1.06e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38511.t1 | AT5G05340 | 70.968 | 248 | 71 | 1 | 6 | 253 | 74 | 320 | 4.38e-127 | 363 |
| MS.gene38511.t1 | AT5G58400 | 68.651 | 252 | 79 | 0 | 6 | 257 | 74 | 325 | 1.09e-125 | 360 |
| MS.gene38511.t1 | AT5G58390 | 68.254 | 252 | 80 | 0 | 6 | 257 | 65 | 316 | 1.15e-125 | 360 |
| MS.gene38511.t1 | AT1G14550 | 55.512 | 254 | 109 | 4 | 6 | 257 | 70 | 321 | 4.69e-93 | 277 |
| MS.gene38511.t1 | AT4G36430 | 48.846 | 260 | 122 | 4 | 6 | 257 | 74 | 330 | 3.13e-84 | 255 |
| MS.gene38511.t1 | AT1G14540 | 51.181 | 254 | 119 | 4 | 6 | 257 | 65 | 315 | 1.46e-83 | 253 |
| MS.gene38511.t1 | AT2G18150 | 48.462 | 260 | 123 | 4 | 6 | 257 | 80 | 336 | 4.78e-83 | 252 |
| MS.gene38511.t1 | AT1G44970 | 49.808 | 261 | 119 | 4 | 6 | 257 | 89 | 346 | 5.29e-83 | 252 |
| MS.gene38511.t1 | AT5G66390 | 46.923 | 260 | 127 | 4 | 6 | 257 | 77 | 333 | 9.61e-83 | 251 |
| MS.gene38511.t1 | AT5G06720 | 48.276 | 261 | 123 | 4 | 6 | 257 | 76 | 333 | 7.43e-81 | 246 |
| MS.gene38511.t1 | AT2G18140 | 48.077 | 260 | 124 | 4 | 6 | 257 | 79 | 335 | 3.57e-80 | 244 |
| MS.gene38511.t1 | AT2G35380 | 50.000 | 262 | 117 | 5 | 8 | 257 | 76 | 335 | 5.96e-80 | 244 |
| MS.gene38511.t1 | AT3G50990 | 46.923 | 260 | 127 | 5 | 6 | 257 | 85 | 341 | 6.38e-80 | 244 |
| MS.gene38511.t1 | AT5G06730 | 47.510 | 261 | 125 | 5 | 6 | 257 | 77 | 334 | 2.28e-79 | 243 |
| MS.gene38511.t1 | AT4G16270 | 50.192 | 261 | 115 | 6 | 6 | 257 | 94 | 348 | 3.57e-78 | 240 |
| MS.gene38511.t1 | AT1G68850 | 44.151 | 265 | 132 | 5 | 6 | 257 | 74 | 335 | 2.75e-77 | 237 |
| MS.gene38511.t1 | AT2G38390 | 48.855 | 262 | 121 | 6 | 6 | 257 | 75 | 333 | 5.59e-77 | 237 |
| MS.gene38511.t1 | AT2G35380 | 50.407 | 246 | 108 | 5 | 24 | 257 | 4 | 247 | 1.59e-75 | 230 |
| MS.gene38511.t1 | AT1G49570 | 48.249 | 257 | 122 | 4 | 6 | 253 | 92 | 346 | 1.20e-74 | 231 |
| MS.gene38511.t1 | AT3G32980 | 46.768 | 263 | 126 | 5 | 6 | 257 | 75 | 334 | 5.57e-74 | 229 |
| MS.gene38511.t1 | AT2G38380 | 47.328 | 262 | 125 | 6 | 6 | 257 | 75 | 333 | 2.92e-73 | 227 |
| MS.gene38511.t1 | AT4G08770 | 47.148 | 263 | 125 | 5 | 6 | 257 | 68 | 327 | 2.80e-72 | 225 |
| MS.gene38511.t1 | AT4G08780 | 45.627 | 263 | 129 | 5 | 6 | 257 | 68 | 327 | 2.81e-71 | 222 |
| MS.gene38511.t1 | AT3G49110 | 46.388 | 263 | 127 | 5 | 6 | 257 | 77 | 336 | 1.89e-70 | 220 |
| MS.gene38511.t1 | AT5G19890 | 46.768 | 263 | 120 | 6 | 6 | 257 | 74 | 327 | 2.27e-70 | 219 |
| MS.gene38511.t1 | AT2G22420 | 45.136 | 257 | 128 | 5 | 8 | 257 | 69 | 319 | 2.76e-69 | 216 |
| MS.gene38511.t1 | AT3G49120 | 45.247 | 263 | 130 | 5 | 6 | 257 | 76 | 335 | 1.45e-68 | 216 |
| MS.gene38511.t1 | AT5G19880 | 44.697 | 264 | 131 | 5 | 6 | 257 | 69 | 329 | 2.35e-68 | 214 |
| MS.gene38511.t1 | AT4G33420 | 47.036 | 253 | 125 | 5 | 6 | 257 | 81 | 325 | 1.85e-67 | 212 |
| MS.gene38511.t1 | AT4G33420 | 47.036 | 253 | 125 | 5 | 6 | 257 | 128 | 372 | 7.11e-67 | 212 |
| MS.gene38511.t1 | AT5G51890 | 43.243 | 259 | 134 | 5 | 6 | 257 | 70 | 322 | 4.40e-65 | 206 |
| MS.gene38511.t1 | AT3G01190 | 41.538 | 260 | 136 | 6 | 6 | 257 | 70 | 321 | 1.28e-61 | 197 |
| MS.gene38511.t1 | AT4G11290 | 40.230 | 261 | 144 | 5 | 6 | 257 | 69 | 326 | 2.04e-59 | 191 |
| MS.gene38511.t1 | AT5G15180 | 39.847 | 261 | 141 | 7 | 6 | 257 | 76 | 329 | 6.37e-59 | 190 |
| MS.gene38511.t1 | AT5G64120 | 40.541 | 259 | 138 | 6 | 6 | 257 | 79 | 328 | 6.90e-59 | 190 |
| MS.gene38511.t1 | AT1G05260 | 41.762 | 261 | 138 | 7 | 6 | 257 | 70 | 325 | 7.20e-59 | 190 |
| MS.gene38511.t1 | AT5G17820 | 42.308 | 260 | 128 | 7 | 6 | 257 | 68 | 313 | 9.21e-59 | 189 |
| MS.gene38511.t1 | AT5G17820 | 42.308 | 260 | 128 | 7 | 6 | 257 | 121 | 366 | 1.33e-57 | 187 |
| MS.gene38511.t1 | AT3G03670 | 40.458 | 262 | 139 | 5 | 6 | 257 | 67 | 321 | 1.08e-56 | 184 |
| MS.gene38511.t1 | AT5G42180 | 41.016 | 256 | 136 | 6 | 6 | 254 | 67 | 314 | 3.47e-56 | 182 |
| MS.gene38511.t1 | AT2G41480 | 40.530 | 264 | 137 | 7 | 6 | 257 | 73 | 328 | 7.16e-56 | 182 |
| MS.gene38511.t1 | AT3G21770 | 41.245 | 257 | 137 | 7 | 6 | 253 | 73 | 324 | 2.11e-55 | 181 |
| MS.gene38511.t1 | AT1G30870 | 40.000 | 260 | 135 | 6 | 8 | 257 | 97 | 345 | 3.48e-55 | 181 |
| MS.gene38511.t1 | AT5G14130 | 37.931 | 261 | 147 | 5 | 6 | 257 | 76 | 330 | 3.59e-55 | 180 |
| MS.gene38511.t1 | AT1G71695 | 40.392 | 255 | 146 | 4 | 6 | 257 | 88 | 339 | 3.76e-55 | 181 |
| MS.gene38511.t1 | AT5G14130 | 37.931 | 261 | 147 | 5 | 6 | 257 | 117 | 371 | 1.32e-54 | 180 |
| MS.gene38511.t1 | AT1G05240 | 37.597 | 258 | 145 | 6 | 6 | 253 | 70 | 321 | 3.65e-54 | 177 |
| MS.gene38511.t1 | AT1G05250 | 37.597 | 258 | 145 | 6 | 6 | 253 | 70 | 321 | 3.65e-54 | 177 |
| MS.gene38511.t1 | AT5G39580 | 41.313 | 259 | 137 | 7 | 6 | 257 | 69 | 319 | 2.65e-53 | 175 |
| MS.gene38511.t1 | AT5G40150 | 36.759 | 253 | 155 | 4 | 8 | 257 | 78 | 328 | 2.91e-53 | 175 |
| MS.gene38511.t1 | AT1G34510 | 39.921 | 253 | 142 | 6 | 6 | 257 | 66 | 309 | 5.20e-53 | 174 |
| MS.gene38511.t1 | AT4G26010 | 39.526 | 253 | 143 | 4 | 6 | 257 | 66 | 309 | 1.12e-51 | 171 |
| MS.gene38511.t1 | AT4G26010 | 39.526 | 253 | 143 | 4 | 6 | 257 | 94 | 337 | 2.71e-51 | 171 |
| MS.gene38511.t1 | AT3G28200 | 36.111 | 252 | 157 | 4 | 8 | 257 | 67 | 316 | 1.52e-50 | 168 |
| MS.gene38511.t1 | AT4G17690 | 37.891 | 256 | 152 | 5 | 6 | 257 | 70 | 322 | 1.80e-50 | 168 |
| MS.gene38511.t1 | AT4G33870 | 32.292 | 288 | 153 | 5 | 6 | 253 | 112 | 397 | 1.16e-49 | 168 |
| MS.gene38511.t1 | AT4G37530 | 38.023 | 263 | 148 | 7 | 6 | 257 | 71 | 329 | 3.22e-49 | 165 |
| MS.gene38511.t1 | AT5G47000 | 38.372 | 258 | 149 | 6 | 6 | 257 | 77 | 330 | 1.19e-48 | 164 |
| MS.gene38511.t1 | AT2G18980 | 40.755 | 265 | 134 | 9 | 6 | 257 | 69 | 323 | 3.35e-48 | 162 |
| MS.gene38511.t1 | AT5G67400 | 37.879 | 264 | 147 | 7 | 6 | 257 | 71 | 329 | 5.36e-48 | 162 |
| MS.gene38511.t1 | AT2G34060 | 39.847 | 261 | 142 | 7 | 6 | 254 | 86 | 343 | 8.54e-48 | 162 |
| MS.gene38511.t1 | AT5G64110 | 37.786 | 262 | 144 | 6 | 6 | 257 | 78 | 330 | 1.04e-47 | 161 |
| MS.gene38511.t1 | AT4G25980 | 36.604 | 265 | 147 | 7 | 6 | 257 | 70 | 326 | 3.37e-47 | 160 |
| MS.gene38511.t1 | AT1G77100 | 38.224 | 259 | 146 | 7 | 6 | 257 | 68 | 319 | 9.61e-47 | 158 |
| MS.gene38511.t1 | AT4G30170 | 37.500 | 264 | 144 | 6 | 6 | 257 | 71 | 325 | 1.31e-46 | 158 |
| MS.gene38511.t1 | AT5G64100 | 35.115 | 262 | 149 | 6 | 6 | 257 | 81 | 331 | 4.17e-46 | 157 |
| MS.gene38511.t1 | AT2G24800 | 33.333 | 261 | 159 | 5 | 6 | 257 | 75 | 329 | 6.02e-46 | 156 |
| MS.gene38511.t1 | AT4G37520 | 37.500 | 264 | 148 | 8 | 6 | 257 | 71 | 329 | 8.84e-46 | 156 |
| MS.gene38511.t1 | AT2G37130 | 34.766 | 256 | 161 | 5 | 6 | 257 | 43 | 296 | 2.57e-45 | 154 |
| MS.gene38511.t1 | AT4G31760 | 34.100 | 261 | 156 | 5 | 6 | 257 | 73 | 326 | 3.15e-45 | 154 |
| MS.gene38511.t1 | AT5G24070 | 33.969 | 262 | 156 | 5 | 6 | 257 | 81 | 335 | 4.49e-45 | 154 |
| MS.gene38511.t1 | AT1G24110 | 36.538 | 260 | 154 | 5 | 6 | 257 | 66 | 322 | 4.89e-45 | 154 |
| MS.gene38511.t1 | AT2G37130 | 34.766 | 256 | 161 | 5 | 6 | 257 | 74 | 327 | 5.63e-45 | 154 |
| MS.gene38511.t1 | AT2G43480 | 33.969 | 262 | 156 | 4 | 6 | 257 | 81 | 335 | 4.43e-44 | 152 |
| MS.gene38511.t1 | AT3G49960 | 35.985 | 264 | 152 | 7 | 6 | 257 | 71 | 329 | 1.78e-43 | 150 |
| MS.gene38511.t1 | AT4G37520 | 36.742 | 264 | 147 | 9 | 6 | 257 | 71 | 326 | 2.15e-43 | 150 |
| MS.gene38511.t1 | AT2G39040 | 36.882 | 263 | 153 | 7 | 6 | 257 | 90 | 350 | 4.39e-42 | 147 |
| MS.gene38511.t1 | AT4G21960 | 31.873 | 251 | 166 | 4 | 6 | 253 | 75 | 323 | 5.97e-41 | 144 |
| MS.gene38511.t1 | AT5G22410 | 36.154 | 260 | 144 | 9 | 8 | 255 | 74 | 323 | 5.00e-39 | 139 |
| MS.gene38511.t1 | AT4G37530 | 40.094 | 212 | 112 | 7 | 6 | 206 | 71 | 278 | 5.06e-39 | 137 |
| MS.gene38511.t1 | AT3G17070 | 30.469 | 256 | 170 | 3 | 5 | 253 | 81 | 335 | 4.40e-36 | 131 |
| MS.gene38511.t1 | AT3G17070 | 30.435 | 253 | 168 | 3 | 8 | 253 | 21 | 272 | 3.13e-35 | 127 |
| MS.gene38511.t1 | AT5G39580 | 42.405 | 158 | 81 | 4 | 6 | 163 | 69 | 216 | 3.98e-29 | 110 |
| MS.gene38511.t1 | AT4G25980 | 44.000 | 125 | 65 | 3 | 6 | 130 | 115 | 234 | 6.59e-28 | 108 |
| MS.gene38511.t1 | AT2G24800 | 39.837 | 123 | 69 | 2 | 6 | 128 | 75 | 192 | 6.24e-23 | 94.4 |
| MS.gene38511.t1 | AT4G32320 | 29.046 | 241 | 109 | 6 | 11 | 236 | 126 | 319 | 2.77e-15 | 74.7 |
| MS.gene38511.t1 | AT3G42570 | 31.683 | 101 | 69 | 0 | 30 | 130 | 49 | 149 | 6.05e-14 | 67.8 |
| MS.gene38511.t1 | AT1G77490 | 28.085 | 235 | 136 | 8 | 8 | 236 | 129 | 336 | 4.04e-13 | 68.9 |
| MS.gene38511.t1 | AT1G77490 | 28.085 | 235 | 136 | 8 | 8 | 236 | 129 | 336 | 4.24e-13 | 68.9 |
Find 48 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCCTTGTTTCCCAGTTAA+AGG | 0.132682 | 3.4:-61843949 | None:intergenic |
| TCTCCTGAGCCACTTGTTCT+AGG | 0.244890 | 3.4:-61843715 | None:intergenic |
| AAGGACATGGTTGCTTTATC+TGG | 0.287607 | 3.4:+61842749 | MS.gene38511:CDS |
| GGAGATAATAAGCCTTTAAC+TGG | 0.288260 | 3.4:+61843937 | MS.gene38511:CDS |
| CCTCTCACTGAATTGTTGTT+AGG | 0.344385 | 3.4:-61841627 | None:intergenic |
| CTGGGAAACAAGGGGAGATT+AGG | 0.373206 | 3.4:+61843956 | MS.gene38511:CDS |
| AATTGATGCTATAAAATCTA+AGG | 0.374906 | 3.4:+61841659 | MS.gene38511:CDS |
| AAGTTGAGATAAGGTTGGTT+AGG | 0.432446 | 3.4:-61842703 | None:intergenic |
| TTTCAGGAGCTCACACAATA+GGG | 0.432739 | 3.4:+61843605 | MS.gene38511:intron |
| GGGAGATTAGGAAGAATTGT+AGG | 0.435594 | 3.4:+61843968 | MS.gene38511:CDS |
| CTCCTGAGCCACTTGTTCTA+GGG | 0.446044 | 3.4:-61843714 | None:intergenic |
| TGTAGCTGCAATGATTAAGA+TGG | 0.448563 | 3.4:+61843915 | MS.gene38511:CDS |
| GAGCTTTAAAAGTTGAGATA+AGG | 0.452562 | 3.4:-61842712 | None:intergenic |
| ACAGTACATTTGCTAAGATA+AGG | 0.454514 | 3.4:+61843680 | MS.gene38511:CDS |
| AGGTTGGTTAGGTTAGATGT+AGG | 0.468281 | 3.4:-61842692 | None:intergenic |
| TGCCCTAGAACAAGTGGCTC+AGG | 0.473241 | 3.4:+61843712 | MS.gene38511:CDS |
| AAGAATCTCATTATCAAAAG+AGG | 0.477009 | 3.4:+61843796 | MS.gene38511:CDS |
| GTTAGGTTAGATGTAGGAGC+TGG | 0.487957 | 3.4:-61842686 | None:intergenic |
| AATTTCACTGCTGCAAACAC+TGG | 0.493527 | 3.4:+61842656 | MS.gene38511:CDS |
| AAAACAAAATAGGGTTGTGA+TGG | 0.494547 | 3.4:+61841552 | MS.gene38511:intron |
| AAGCCTTTAACTGGGAAACA+AGG | 0.501073 | 3.4:+61843946 | MS.gene38511:CDS |
| TTTAAAAGTTGAGATAAGGT+TGG | 0.503940 | 3.4:-61842708 | None:intergenic |
| AGATAAAGCAACCATGTCCT+TGG | 0.505640 | 3.4:-61842747 | None:intergenic |
| ATTTCACTGCTGCAAACACT+GGG | 0.508356 | 3.4:+61842657 | MS.gene38511:CDS |
| GATGACACTTCGTCCTTCAA+AGG | 0.509796 | 3.4:+61841588 | MS.gene38511:CDS |
| TCTGATCAAGTACTCTTCAA+TGG | 0.517394 | 3.4:+61843829 | MS.gene38511:CDS |
| TCAGCACATGAGACCACACC+AGG | 0.521970 | 3.4:-61841696 | None:intergenic |
| AGGACTTTCTGCCAAGGACA+TGG | 0.532504 | 3.4:+61842736 | MS.gene38511:CDS |
| GTAGCTGCAATGATTAAGAT+GGG | 0.533136 | 3.4:+61843916 | MS.gene38511:CDS |
| TAATTGTTGTCAAAATGAGT+TGG | 0.535271 | 3.4:-61843769 | None:intergenic |
| AGCTACAAAATCAGAATCAA+AGG | 0.554480 | 3.4:-61843899 | None:intergenic |
| GCAAGGTGTACAAGTTTCAG+AGG | 0.580296 | 3.4:+61843631 | MS.gene38511:CDS |
| AGCCTTTAACTGGGAAACAA+GGG | 0.580782 | 3.4:+61843947 | MS.gene38511:CDS |
| AAGAACTGCCCTAGAACAAG+TGG | 0.582954 | 3.4:+61843706 | MS.gene38511:CDS |
| CTCACACAATAGGGAGAGCA+AGG | 0.588677 | 3.4:+61843614 | MS.gene38511:CDS |
| AAACAAAATAGGGTTGTGAT+GGG | 0.589771 | 3.4:+61841553 | MS.gene38511:intron |
| AAGGTGGAAGCAATATGCCC+TGG | 0.603139 | 3.4:+61841678 | MS.gene38511:CDS |
| TGATGCTATAAAATCTAAGG+TGG | 0.606554 | 3.4:+61841662 | MS.gene38511:CDS |
| CCTAACAACAATTCAGTGAG+AGG | 0.614084 | 3.4:+61841627 | MS.gene38511:CDS |
| AGCTCAAGGACTTTCTGCCA+AGG | 0.614786 | 3.4:+61842730 | MS.gene38511:CDS |
| GGTCTCATGTGCTGACATAG+TGG | 0.615606 | 3.4:+61841704 | MS.gene38511:CDS |
| AAGTTGGGAGAAGAGATTCA+AGG | 0.621582 | 3.4:+61842627 | MS.gene38511:CDS |
| GATCAAGTACTCTTCAATGG+TGG | 0.633726 | 3.4:+61843832 | MS.gene38511:CDS |
| GCCTTTAACTGGGAAACAAG+GGG | 0.634825 | 3.4:+61843948 | MS.gene38511:CDS |
| GAGATAATAAGCCTTTAACT+GGG | 0.654488 | 3.4:+61843938 | MS.gene38511:CDS |
| GGAAGCAATATGCCCTGGTG+TGG | 0.672684 | 3.4:+61841683 | MS.gene38511:CDS |
| TTTCACTGCTGCAAACACTG+GGG | 0.769355 | 3.4:+61842658 | MS.gene38511:CDS |
| CAGCACATGAGACCACACCA+GGG | 0.770514 | 3.4:-61841695 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTAATTATGAATAATTA+CGG | + | chr3.4:61842290-61842309 | MS.gene38511:intron | 10.0% |
| !!! | ATGAATTAACTATTTTTTTA+AGG | - | chr3.4:61841229-61841248 | None:intergenic | 10.0% |
| !!! | TTTTTTGTTACTTTTTTTTT+TGG | + | chr3.4:61841060-61841079 | MS.gene38511:intron | 10.0% |
| !! | AAGAAAAAAAACTTAAAAGT+CGG | + | chr3.4:61841305-61841324 | MS.gene38511:intron | 15.0% |
| !! | ATAACTACATAATTGTTATA+CGG | + | chr3.4:61842975-61842994 | MS.gene38511:intron | 15.0% |
| !!! | AAACATAATTGACAATTTTT+AGG | + | chr3.4:61841819-61841838 | MS.gene38511:intron | 15.0% |
| !!! | AACATAATTGACAATTTTTA+GGG | + | chr3.4:61841820-61841839 | MS.gene38511:intron | 15.0% |
| !!! | ATAATTTTTTTTATCAAGCT+TGG | - | chr3.4:61842169-61842188 | None:intergenic | 15.0% |
| !!! | GTATTTATTTGAAATAAAAG+TGG | - | chr3.4:61843184-61843203 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTGTATAATACAT+CGG | + | chr3.4:61842034-61842053 | MS.gene38511:intron | 15.0% |
| !!! | TTAATAACATAATTTGTGTA+GGG | - | chr3.4:61841264-61841283 | None:intergenic | 15.0% |
| !!! | TTGTTTTAAGTTTCAAATAA+TGG | - | chr3.4:61842810-61842829 | None:intergenic | 15.0% |
| !!! | TTTAATAACATAATTTGTGT+AGG | - | chr3.4:61841265-61841284 | None:intergenic | 15.0% |
| !!! | TTTTATTTTAAAGAAACGAA+AGG | + | chr3.4:61843465-61843484 | MS.gene38511:intron | 15.0% |
| !!! | TTTTTTTTCTTTTTCTTGTA+TGG | - | chr3.4:61841296-61841315 | None:intergenic | 15.0% |
| !! | AAAAGAAAAAATAACTAGCA+AGG | + | chr3.4:61843244-61843263 | MS.gene38511:intron | 20.0% |
| !! | AAAATTCTATGAATCTTTGA+CGG | + | chr3.4:61843411-61843430 | MS.gene38511:intron | 20.0% |
| !! | AACATGTAATAATCAAAACA+AGG | - | chr3.4:61841097-61841116 | None:intergenic | 20.0% |
| !! | AATATTACCATTTGAGAATA+TGG | + | chr3.4:61842428-61842447 | MS.gene38511:intron | 20.0% |
| !! | AATTGATGCTATAAAATCTA+AGG | + | chr3.4:61841659-61841678 | MS.gene38511:CDS | 20.0% |
| !! | AATTTCAATAATGGTATGTT+TGG | + | chr3.4:61841882-61841901 | MS.gene38511:intron | 20.0% |
| !! | AGAAAAAAAACTTAAAAGTC+GGG | + | chr3.4:61841306-61841325 | MS.gene38511:intron | 20.0% |
| !! | TATTATACAAAAAAAGACTC+AGG | - | chr3.4:61842031-61842050 | None:intergenic | 20.0% |
| !!! | AAACTTTTCATATCATCTTA+TGG | - | chr3.4:61841144-61841163 | None:intergenic | 20.0% |
| !!! | AATAAAACTGTTTTATTACG+TGG | - | chr3.4:61843452-61843471 | None:intergenic | 20.0% |
| !!! | AGATTCATAGAATTTTCAAA+TGG | - | chr3.4:61843407-61843426 | None:intergenic | 20.0% |
| !!! | ATTCAAAATATTTTGAAGTC+TGG | - | chr3.4:61841459-61841478 | None:intergenic | 20.0% |
| !!! | ATTTATCTTTTTGTCTCTTT+AGG | + | chr3.4:61842831-61842850 | MS.gene38511:intron | 20.0% |
| !!! | CATTATTTTATAAAAAGGGT+AGG | - | chr3.4:61842527-61842546 | None:intergenic | 20.0% |
| !!! | CTACCCTTTTTATAAAATAA+TGG | + | chr3.4:61842525-61842544 | MS.gene38511:intron | 20.0% |
| !!! | GGACCATTATTTTATAAAAA+GGG | - | chr3.4:61842531-61842550 | None:intergenic | 20.0% |
| !!! | GTGATTTTCAATTTCAATAA+TGG | + | chr3.4:61841873-61841892 | MS.gene38511:intron | 20.0% |
| !!! | TAATAACATAATTTGTGTAG+GGG | - | chr3.4:61841263-61841282 | None:intergenic | 20.0% |
| !!! | TCTATTCATGATATTTTATG+TGG | + | chr3.4:61843581-61843600 | MS.gene38511:intron | 20.0% |
| !!! | TGGACCATTATTTTATAAAA+AGG | - | chr3.4:61842532-61842551 | None:intergenic | 20.0% |
| !!! | TGTTTTAACCCAAAAAATTA+CGG | - | chr3.4:61843333-61843352 | None:intergenic | 20.0% |
| !!! | TTAATTTGTATTTTGTAGCT+TGG | + | chr3.4:61842584-61842603 | MS.gene38511:intron | 20.0% |
| !!! | TTTTTTTCTTCTTAATTGCA+TGG | - | chr3.4:61843061-61843080 | None:intergenic | 20.0% |
| ! | AAAAAAAACTTAAAAGTCGG+GGG | + | chr3.4:61841308-61841327 | MS.gene38511:intron | 25.0% |
| ! | AAAAAGTAACCAAAACAACA+AGG | - | chr3.4:61841044-61841063 | None:intergenic | 25.0% |
| ! | AAAATTCAGTGTTAGTAGAT+TGG | - | chr3.4:61841774-61841793 | None:intergenic | 25.0% |
| ! | AAGAATCTCATTATCAAAAG+AGG | + | chr3.4:61843796-61843815 | MS.gene38511:CDS | 25.0% |
| ! | AATTAGTCCATATTCTCAAA+TGG | - | chr3.4:61842438-61842457 | None:intergenic | 25.0% |
| ! | ATTATGAATAATTACGGTTG+TGG | + | chr3.4:61842296-61842315 | MS.gene38511:intron | 25.0% |
| ! | CCATAATGATTTCTATGATT+GGG | + | chr3.4:61843128-61843147 | MS.gene38511:intron | 25.0% |
| ! | GAAAAAAAACTTAAAAGTCG+GGG | + | chr3.4:61841307-61841326 | MS.gene38511:intron | 25.0% |
| ! | TAATTGTTGTCAAAATGAGT+TGG | - | chr3.4:61843772-61843791 | None:intergenic | 25.0% |
| ! | TCCATAATGATTTCTATGAT+TGG | + | chr3.4:61843127-61843146 | MS.gene38511:intron | 25.0% |
| ! | TTTAAAAGTTGAGATAAGGT+TGG | - | chr3.4:61842711-61842730 | None:intergenic | 25.0% |
| ! | TTTAATCCTTTGTGTTTGTT+TGG | - | chr3.4:61842466-61842485 | None:intergenic | 25.0% |
| !! | GCTCTTTGAAAAACAAAATA+GGG | + | chr3.4:61841543-61841562 | MS.gene38511:intron | 25.0% |
| !! | TGATATTTTATGTGGTTTTC+AGG | + | chr3.4:61843589-61843608 | MS.gene38511:intron | 25.0% |
| !! | TGCTCTTTGAAAAACAAAAT+AGG | + | chr3.4:61841542-61841561 | MS.gene38511:intron | 25.0% |
| !! | TTGTGACTTCTATATTTTCA+CGG | - | chr3.4:61841950-61841969 | None:intergenic | 25.0% |
| !! | TTTCAAATAATGGAAGACAA+AGG | - | chr3.4:61842800-61842819 | None:intergenic | 25.0% |
| !!! | AAATTTGAACCTTGTTGTTT+TGG | + | chr3.4:61841032-61841051 | MS.gene38511:intron | 25.0% |
| !!! | AACATTACTTGAAGTTTTGA+AGG | - | chr3.4:61841011-61841030 | None:intergenic | 25.0% |
| !!! | AATAATGTCCCTTTTTTGTA+GGG | - | chr3.4:61843554-61843573 | None:intergenic | 25.0% |
| AAAAAAACTTAAAAGTCGGG+GGG | + | chr3.4:61841309-61841328 | MS.gene38511:intron | 30.0% | |
| AAAACAAAATAGGGTTGTGA+TGG | + | chr3.4:61841552-61841571 | MS.gene38511:intron | 30.0% | |
| AAACAAAATAGGGTTGTGAT+GGG | + | chr3.4:61841553-61841572 | MS.gene38511:intron | 30.0% | |
| AAGGATGCAATTACATATTC+AGG | - | chr3.4:61842338-61842357 | None:intergenic | 30.0% | |
| AGAAGAAAACCCTACAAAAA+AGG | + | chr3.4:61843542-61843561 | MS.gene38511:intron | 30.0% | |
| AGCTACAAAATCAGAATCAA+AGG | - | chr3.4:61843902-61843921 | None:intergenic | 30.0% | |
| AGTCATCAACAAATCCAATT+AGG | + | chr3.4:61842400-61842419 | MS.gene38511:intron | 30.0% | |
| CAACCACGAATAATTAATCA+AGG | + | chr3.4:61842902-61842921 | MS.gene38511:intron | 30.0% | |
| CATCCTTGATTAATTATTCG+TGG | - | chr3.4:61842908-61842927 | None:intergenic | 30.0% | |
| CCCAATCATAGAAATCATTA+TGG | - | chr3.4:61843131-61843150 | None:intergenic | 30.0% | |
| CTTGATTAATTATTCGTGGT+TGG | - | chr3.4:61842904-61842923 | None:intergenic | 30.0% | |
| GAAATAAAAGTGGTTGTTAG+TGG | - | chr3.4:61843174-61843193 | None:intergenic | 30.0% | |
| GAAGAAAACCCTACAAAAAA+GGG | + | chr3.4:61843543-61843562 | MS.gene38511:intron | 30.0% | |
| GAGATAATAAGCCTTTAACT+GGG | + | chr3.4:61843938-61843957 | MS.gene38511:CDS | 30.0% | |
| GCATTAGCATAGTGATAAAA+AGG | + | chr3.4:61841361-61841380 | MS.gene38511:intron | 30.0% | |
| GTCATATTTGCTCAAAATTG+TGG | - | chr3.4:61842070-61842089 | None:intergenic | 30.0% | |
| TGATGCTATAAAATCTAAGG+TGG | + | chr3.4:61841662-61841681 | MS.gene38511:CDS | 30.0% | |
| ! | AATCAAAGGTCTTTTCATTC+TGG | - | chr3.4:61843888-61843907 | None:intergenic | 30.0% |
| ! | ACAGTACATTTGCTAAGATA+AGG | + | chr3.4:61843680-61843699 | MS.gene38511:CDS | 30.0% |
| ! | ATTTGTATTTTGTAGCTTGG+AGG | + | chr3.4:61842587-61842606 | MS.gene38511:intron | 30.0% |
| ! | GAATTTTCAAATGGCAAAGT+TGG | - | chr3.4:61843398-61843417 | None:intergenic | 30.0% |
| ! | GGTAATATTGATGACCTAAT+TGG | - | chr3.4:61842417-61842436 | None:intergenic | 30.0% |
| ! | TATCTTTTTGTCTCTTTAGG+AGG | + | chr3.4:61842834-61842853 | MS.gene38511:intron | 30.0% |
| ! | TGAGAATATGGACTAATTCT+TGG | + | chr3.4:61842440-61842459 | MS.gene38511:intron | 30.0% |
| ! | TGCAATTTAAAACCATGATC+TGG | + | chr3.4:61842119-61842138 | MS.gene38511:intron | 30.0% |
| ! | TTTAGATCTTGGTGGTTAAT+CGG | + | chr3.4:61842237-61842256 | MS.gene38511:intron | 30.0% |
| ! | TTTGGGTTAAAACAATTGAG+CGG | + | chr3.4:61843339-61843358 | MS.gene38511:intron | 30.0% |
| !! | AAAACAATTGAGCGGATTTT+TGG | + | chr3.4:61843347-61843366 | MS.gene38511:intron | 30.0% |
| !! | AGTTTTAACAAGTGAATCAG+TGG | - | chr3.4:61843860-61843879 | None:intergenic | 30.0% |
| !! | ATCTTTTTGTCTCTTTAGGA+GGG | + | chr3.4:61842835-61842854 | MS.gene38511:intron | 30.0% |
| !! | CTTTTTGGAAGGTAAAAGTT+GGG | + | chr3.4:61842612-61842631 | MS.gene38511:CDS | 30.0% |
| !! | GAGCTTTAAAAGTTGAGATA+AGG | - | chr3.4:61842715-61842734 | None:intergenic | 30.0% |
| !!! | ATCTCAACTTTTAAAGCTCA+AGG | + | chr3.4:61842716-61842735 | MS.gene38511:CDS | 30.0% |
| !!! | CAATAATGTCCCTTTTTTGT+AGG | - | chr3.4:61843555-61843574 | None:intergenic | 30.0% |
| !!! | GGAATATGTTTTTTCACAGA+GGG | - | chr3.4:61843377-61843396 | None:intergenic | 30.0% |
| !!! | TGGAATATGTTTTTTCACAG+AGG | - | chr3.4:61843378-61843397 | None:intergenic | 30.0% |
| AAGTCACAAATTGTAGCATC+AGG | + | chr3.4:61841961-61841980 | MS.gene38511:intron | 35.0% | |
| AATTACATATTCAGGTCGTC+AGG | - | chr3.4:61842330-61842349 | None:intergenic | 35.0% | |
| ACAAGGTTGTTGTACTACTT+CGG | + | chr3.4:61841336-61841355 | MS.gene38511:intron | 35.0% | |
| ACATGTTATACACATGCACA+AGG | + | chr3.4:61841110-61841129 | MS.gene38511:intron | 35.0% | |
| ACCAAATGCTACTGGAATTA+TGG | + | chr3.4:61842088-61842107 | MS.gene38511:intron | 35.0% | |
| ACCATAATTCCAGTAGCATT+TGG | - | chr3.4:61842092-61842111 | None:intergenic | 35.0% | |
| CAAATATGACCAAATGCTAC+TGG | + | chr3.4:61842080-61842099 | MS.gene38511:intron | 35.0% | |
| CCTGTTTCAAAAAACACATG+TGG | + | chr3.4:61842203-61842222 | MS.gene38511:intron | 35.0% | |
| GATGAACACATCATCTCAAT+TGG | - | chr3.4:61843106-61843125 | None:intergenic | 35.0% | |
| GGAGATAATAAGCCTTTAAC+TGG | + | chr3.4:61843937-61843956 | MS.gene38511:CDS | 35.0% | |
| GTAGCTGCAATGATTAAGAT+GGG | + | chr3.4:61843916-61843935 | MS.gene38511:CDS | 35.0% | |
| TCTGATCAAGTACTCTTCAA+TGG | + | chr3.4:61843829-61843848 | MS.gene38511:CDS | 35.0% | |
| TGTAGCTGCAATGATTAAGA+TGG | + | chr3.4:61843915-61843934 | MS.gene38511:CDS | 35.0% | |
| TTGGCTACATGTATGAATCT+TGG | - | chr3.4:61843306-61843325 | None:intergenic | 35.0% | |
| ! | AAAGGGTAGGATTACTCTTT+TGG | - | chr3.4:61842514-61842533 | None:intergenic | 35.0% |
| ! | AAGTTGAGATAAGGTTGGTT+AGG | - | chr3.4:61842706-61842725 | None:intergenic | 35.0% |
| ! | CCAACTTTTACCTTCCAAAA+AGG | - | chr3.4:61842614-61842633 | None:intergenic | 35.0% |
| ! | CTTCTGCAACTTTTTGGATT+TGG | - | chr3.4:61842378-61842397 | None:intergenic | 35.0% |
| ! | GACTTTCTTCTGCAACTTTT+TGG | - | chr3.4:61842384-61842403 | None:intergenic | 35.0% |
| !! | CCTTTTTGGAAGGTAAAAGT+TGG | + | chr3.4:61842611-61842630 | MS.gene38511:CDS | 35.0% |
| !!! | CCAAGTGTCCGTAATTTTTT+GGG | + | chr3.4:61843322-61843341 | MS.gene38511:intron | 35.0% |
| !!! | CCACATGTGTTTTTTGAAAC+AGG | - | chr3.4:61842206-61842225 | None:intergenic | 35.0% |
| !!! | TGCAGTTTTTTCTCCTTTGA+AGG | - | chr3.4:61841604-61841623 | None:intergenic | 35.0% |
| !!! | TTGCCAGTAGTTTTAGATCT+TGG | + | chr3.4:61842226-61842245 | MS.gene38511:intron | 35.0% |
| AAGCCTTTAACTGGGAAACA+AGG | + | chr3.4:61843946-61843965 | MS.gene38511:CDS | 40.0% | |
| AAGTGGTTGTTAGTGGTAGT+TGG | - | chr3.4:61843167-61843186 | None:intergenic | 40.0% | |
| AAGTTGGGAGAAGAGATTCA+AGG | + | chr3.4:61842627-61842646 | MS.gene38511:CDS | 40.0% | |
| AATTTCACTGCTGCAAACAC+TGG | + | chr3.4:61842656-61842675 | MS.gene38511:CDS | 40.0% | |
| AGATAAAGCAACCATGTCCT+TGG | - | chr3.4:61842750-61842769 | None:intergenic | 40.0% | |
| AGCCTTTAACTGGGAAACAA+GGG | + | chr3.4:61843947-61843966 | MS.gene38511:CDS | 40.0% | |
| AGGGAGACACGATTTAGTTA+TGG | + | chr3.4:61842854-61842873 | MS.gene38511:intron | 40.0% | |
| ATTTCACTGCTGCAAACACT+GGG | + | chr3.4:61842657-61842676 | MS.gene38511:CDS | 40.0% | |
| CCCAAAAAATTACGGACACT+TGG | - | chr3.4:61843325-61843344 | None:intergenic | 40.0% | |
| CCTAACAACAATTCAGTGAG+AGG | + | chr3.4:61841627-61841646 | MS.gene38511:CDS | 40.0% | |
| GATCAAGTACTCTTCAATGG+TGG | + | chr3.4:61843832-61843851 | MS.gene38511:CDS | 40.0% | |
| GCTACATGTATGAATCTTGG+TGG | - | chr3.4:61843303-61843322 | None:intergenic | 40.0% | |
| GGGAGATTAGGAAGAATTGT+AGG | + | chr3.4:61843968-61843987 | MS.gene38511:CDS | 40.0% | |
| GTGGTTAATCGGAGATCAAA+CGG | + | chr3.4:61842248-61842267 | MS.gene38511:intron | 40.0% | |
| TCTTGGCCAAACAAACACAA+AGG | + | chr3.4:61842457-61842476 | MS.gene38511:intron | 40.0% | |
| TTTCAGGAGCTCACACAATA+GGG | + | chr3.4:61843605-61843624 | MS.gene38511:intron | 40.0% | |
| ! | AAGGACATGGTTGCTTTATC+TGG | + | chr3.4:61842749-61842768 | MS.gene38511:CDS | 40.0% |
| ! | AGGTTGGTTAGGTTAGATGT+AGG | - | chr3.4:61842695-61842714 | None:intergenic | 40.0% |
| ! | CCACCAAGATCTAAAACTAC+TGG | - | chr3.4:61842232-61842251 | None:intergenic | 40.0% |
| ! | CCTCTCACTGAATTGTTGTT+AGG | - | chr3.4:61841630-61841649 | None:intergenic | 40.0% |
| ! | TAATTTGTGTAGGGGAGATG+AGG | - | chr3.4:61841255-61841274 | None:intergenic | 40.0% |
| !! | TTTTCAGGAGCTCACACAAT+AGG | + | chr3.4:61843604-61843623 | MS.gene38511:intron | 40.0% |
| !!! | CCAGTAGTTTTAGATCTTGG+TGG | + | chr3.4:61842229-61842248 | MS.gene38511:intron | 40.0% |
| !!! | GCCAAGTGTCCGTAATTTTT+TGG | + | chr3.4:61843321-61843340 | MS.gene38511:intron | 40.0% |
| AAAAGTCGGGGGGATATACA+AGG | + | chr3.4:61841319-61841338 | MS.gene38511:intron | 45.0% | |
| AAGAACTGCCCTAGAACAAG+TGG | + | chr3.4:61843706-61843725 | MS.gene38511:CDS | 45.0% | |
| GATGACACTTCGTCCTTCAA+AGG | + | chr3.4:61841588-61841607 | MS.gene38511:CDS | 45.0% | |
| GCAAGGTGTACAAGTTTCAG+AGG | + | chr3.4:61843631-61843650 | MS.gene38511:CDS | 45.0% | |
| GCCTTTAACTGGGAAACAAG+GGG | + | chr3.4:61843948-61843967 | MS.gene38511:CDS | 45.0% | |
| GCTACGTTTGCTTTAGCAGT+GGG | - | chr3.4:61842009-61842028 | None:intergenic | 45.0% | |
| GTTAGGTTAGATGTAGGAGC+TGG | - | chr3.4:61842689-61842708 | None:intergenic | 45.0% | |
| TTTCACTGCTGCAAACACTG+GGG | + | chr3.4:61842658-61842677 | MS.gene38511:CDS | 45.0% | |
| ! | ACCATGATCTGGAGTGCAAA+AGG | + | chr3.4:61842130-61842149 | MS.gene38511:intron | 45.0% |
| ! | ACCTTTTGCACTCCAGATCA+TGG | - | chr3.4:61842134-61842153 | None:intergenic | 45.0% |
| ! | TCCCCTTGTTTCCCAGTTAA+AGG | - | chr3.4:61843952-61843971 | None:intergenic | 45.0% |
| ! | TGTAGCTTGGAGGTCCTTTT+TGG | + | chr3.4:61842597-61842616 | MS.gene38511:intron | 45.0% |
| !! | AAAACAAAATATATATATTA+TGG | - | chr3.4:61842552-61842571 | None:intergenic | 5.0% |
| AAGGTGGAAGCAATATGCCC+TGG | + | chr3.4:61841678-61841697 | MS.gene38511:CDS | 50.0% | |
| AGCTCAAGGACTTTCTGCCA+AGG | + | chr3.4:61842730-61842749 | MS.gene38511:CDS | 50.0% | |
| AGGACTTTCTGCCAAGGACA+TGG | + | chr3.4:61842736-61842755 | MS.gene38511:CDS | 50.0% | |
| CTCACACAATAGGGAGAGCA+AGG | + | chr3.4:61843614-61843633 | MS.gene38511:CDS | 50.0% | |
| CTCCTGAGCCACTTGTTCTA+GGG | - | chr3.4:61843717-61843736 | None:intergenic | 50.0% | |
| CTGGGAAACAAGGGGAGATT+AGG | + | chr3.4:61843956-61843975 | MS.gene38511:CDS | 50.0% | |
| GGCTACGTTTGCTTTAGCAG+TGG | - | chr3.4:61842010-61842029 | None:intergenic | 50.0% | |
| TCTCCTGAGCCACTTGTTCT+AGG | - | chr3.4:61843718-61843737 | None:intergenic | 50.0% | |
| TGCATCCTTGAGTCGTTGCA+GGG | + | chr3.4:61842349-61842368 | MS.gene38511:intron | 50.0% | |
| TTGCATCCTTGAGTCGTTGC+AGG | + | chr3.4:61842348-61842367 | MS.gene38511:intron | 50.0% | |
| ! | GCTTGGAGGTCCTTTTTGGA+AGG | + | chr3.4:61842601-61842620 | MS.gene38511:intron | 50.0% |
| ! | GGTCTCATGTGCTGACATAG+TGG | + | chr3.4:61841704-61841723 | MS.gene38511:CDS | 50.0% |
| CAGCACATGAGACCACACCA+GGG | - | chr3.4:61841698-61841717 | None:intergenic | 55.0% | |
| CAGGCTAAACGTGCGTTGAG+TGG | + | chr3.4:61841980-61841999 | MS.gene38511:intron | 55.0% | |
| GGAAGCAATATGCCCTGGTG+TGG | + | chr3.4:61841683-61841702 | MS.gene38511:CDS | 55.0% | |
| GGATTCCCTGCAACGACTCA+AGG | - | chr3.4:61842357-61842376 | None:intergenic | 55.0% | |
| TCAGCACATGAGACCACACC+AGG | - | chr3.4:61841699-61841718 | None:intergenic | 55.0% | |
| TGCCCTAGAACAAGTGGCTC+AGG | + | chr3.4:61843712-61843731 | MS.gene38511:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 61841002 | 61844002 | 61841002 | ID=MS.gene38511 |
| chr3.4 | mRNA | 61841002 | 61844002 | 61841002 | ID=MS.gene38511.t1;Parent=MS.gene38511 |
| chr3.4 | exon | 61841002 | 61841022 | 61841002 | ID=MS.gene38511.t1.exon1;Parent=MS.gene38511.t1 |
| chr3.4 | CDS | 61841002 | 61841022 | 61841002 | ID=cds.MS.gene38511.t1;Parent=MS.gene38511.t1 |
| chr3.4 | exon | 61841564 | 61841755 | 61841564 | ID=MS.gene38511.t1.exon2;Parent=MS.gene38511.t1 |
| chr3.4 | CDS | 61841564 | 61841755 | 61841564 | ID=cds.MS.gene38511.t1;Parent=MS.gene38511.t1 |
| chr3.4 | exon | 61842602 | 61842770 | 61842602 | ID=MS.gene38511.t1.exon3;Parent=MS.gene38511.t1 |
| chr3.4 | CDS | 61842602 | 61842770 | 61842602 | ID=cds.MS.gene38511.t1;Parent=MS.gene38511.t1 |
| chr3.4 | exon | 61843611 | 61844002 | 61843611 | ID=MS.gene38511.t1.exon4;Parent=MS.gene38511.t1 |
| chr3.4 | CDS | 61843611 | 61844002 | 61843611 | ID=cds.MS.gene38511.t1;Parent=MS.gene38511.t1 |
| Gene Sequence |
| Protein sequence |
