Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98878.t1 | XP_003616748.1 | 98.1 | 318 | 6 | 0 | 1 | 318 | 8 | 325 | 7.20E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98878.t1 | A7NY33 | 70.6 | 316 | 92 | 1 | 3 | 318 | 7 | 321 | 6.2e-126 | 451.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98878.t1 | G7KH18 | 98.1 | 318 | 6 | 0 | 1 | 318 | 8 | 325 | 5.2e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene98878 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene98878 | 0.845218 | 4.66E-59 | -1.69E-46 |
| MS.gene053406 | MS.gene98878 | 0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene98878 | 0.862149 | 6.22E-64 | -1.69E-46 |
| MS.gene055124 | MS.gene98878 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene055601 | MS.gene98878 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene98878 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene056330 | MS.gene98878 | 0.811317 | 7.44E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene98878 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene98878 | 0.818554 | 1.85E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene98878 | 0.817334 | 3.48E-52 | -1.69E-46 |
| MS.gene058179 | MS.gene98878 | 0.810235 | 1.28E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene98878 | 0.84403 | 9.73E-59 | -1.69E-46 |
| MS.gene059037 | MS.gene98878 | 0.814827 | 1.26E-51 | -1.69E-46 |
| MS.gene059043 | MS.gene98878 | 0.803238 | 3.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06499 | MS.gene98878 | PPI |
| MS.gene54705 | MS.gene98878 | PPI |
| MS.gene29725 | MS.gene98878 | PPI |
| MS.gene98878 | MS.gene013399 | PPI |
| MS.gene96335 | MS.gene98878 | PPI |
| MS.gene31053 | MS.gene98878 | PPI |
| MS.gene31055 | MS.gene98878 | PPI |
| MS.gene049372 | MS.gene98878 | PPI |
| MS.gene98878 | MS.gene57129 | PPI |
| MS.gene049373 | MS.gene98878 | PPI |
| MS.gene062216 | MS.gene98878 | PPI |
| MS.gene004925 | MS.gene98878 | PPI |
| MS.gene049374 | MS.gene98878 | PPI |
| MS.gene070268 | MS.gene98878 | PPI |
| MS.gene012362 | MS.gene98878 | PPI |
| MS.gene06500 | MS.gene98878 | PPI |
| MS.gene06498 | MS.gene98878 | PPI |
| MS.gene073297 | MS.gene98878 | PPI |
| MS.gene31054 | MS.gene98878 | PPI |
| MS.gene013400 | MS.gene98878 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98878.t1 | MTR_5g083860 | 98.113 | 318 | 6 | 0 | 1 | 318 | 8 | 325 | 0.0 | 639 |
| MS.gene98878.t1 | MTR_3g094670 | 79.872 | 313 | 62 | 1 | 6 | 318 | 11 | 322 | 2.09e-177 | 493 |
| MS.gene98878.t1 | MTR_3g094650 | 75.080 | 313 | 77 | 1 | 6 | 318 | 11 | 322 | 3.20e-168 | 470 |
| MS.gene98878.t1 | MTR_3g094630 | 76.997 | 313 | 71 | 1 | 6 | 318 | 11 | 322 | 8.54e-167 | 466 |
| MS.gene98878.t1 | MTR_3g466200 | 68.932 | 309 | 95 | 1 | 11 | 318 | 12 | 320 | 3.29e-159 | 447 |
| MS.gene98878.t1 | MTR_5g074970 | 64.127 | 315 | 111 | 2 | 6 | 318 | 12 | 326 | 5.84e-147 | 416 |
| MS.gene98878.t1 | MTR_2g084080 | 61.783 | 314 | 117 | 2 | 5 | 318 | 7 | 317 | 3.14e-138 | 394 |
| MS.gene98878.t1 | MTR_3g072190 | 61.562 | 320 | 119 | 2 | 1 | 318 | 1 | 318 | 4.00e-136 | 389 |
| MS.gene98878.t1 | MTR_2g084110 | 59.494 | 316 | 125 | 2 | 3 | 318 | 5 | 317 | 1.27e-133 | 382 |
| MS.gene98878.t1 | MTR_2g084090 | 59.494 | 316 | 126 | 2 | 3 | 318 | 5 | 318 | 3.48e-132 | 379 |
| MS.gene98878.t1 | MTR_2g084020 | 60.317 | 315 | 121 | 4 | 5 | 318 | 7 | 318 | 5.39e-132 | 378 |
| MS.gene98878.t1 | MTR_7g072510 | 59.283 | 307 | 123 | 1 | 12 | 318 | 8 | 312 | 7.40e-132 | 377 |
| MS.gene98878.t1 | MTR_4g083710 | 58.879 | 321 | 129 | 3 | 1 | 318 | 4 | 324 | 1.28e-131 | 377 |
| MS.gene98878.t1 | MTR_2g084010 | 59.048 | 315 | 125 | 3 | 5 | 318 | 7 | 318 | 1.03e-130 | 375 |
| MS.gene98878.t1 | MTR_7g072480 | 58.766 | 308 | 125 | 1 | 11 | 318 | 11 | 316 | 4.62e-128 | 368 |
| MS.gene98878.t1 | MTR_3g466180 | 60.317 | 315 | 122 | 2 | 4 | 318 | 12 | 323 | 1.10e-126 | 365 |
| MS.gene98878.t1 | MTR_2g084000 | 56.508 | 315 | 134 | 3 | 5 | 318 | 7 | 319 | 3.51e-126 | 363 |
| MS.gene98878.t1 | MTR_5g074860 | 58.750 | 320 | 123 | 6 | 4 | 317 | 8 | 324 | 4.26e-126 | 363 |
| MS.gene98878.t1 | MTR_4g029170 | 57.827 | 313 | 127 | 4 | 9 | 318 | 11 | 321 | 6.08e-126 | 363 |
| MS.gene98878.t1 | MTR_4g074995 | 58.333 | 312 | 112 | 5 | 10 | 318 | 12 | 308 | 3.44e-122 | 353 |
| MS.gene98878.t1 | MTR_4g029180 | 58.844 | 294 | 117 | 3 | 27 | 318 | 30 | 321 | 3.18e-121 | 351 |
| MS.gene98878.t1 | MTR_5g074710 | 56.173 | 324 | 133 | 6 | 1 | 318 | 1 | 321 | 8.08e-120 | 347 |
| MS.gene98878.t1 | MTR_5g074760 | 54.938 | 324 | 137 | 6 | 1 | 318 | 1 | 321 | 4.20e-118 | 343 |
| MS.gene98878.t1 | MTR_4g074990 | 56.410 | 312 | 117 | 4 | 9 | 318 | 11 | 305 | 8.27e-118 | 342 |
| MS.gene98878.t1 | MTR_5g074740 | 54.938 | 324 | 137 | 6 | 1 | 318 | 1 | 321 | 4.79e-117 | 340 |
| MS.gene98878.t1 | MTR_4g029200 | 52.050 | 317 | 149 | 2 | 3 | 318 | 24 | 338 | 5.58e-116 | 338 |
| MS.gene98878.t1 | MTR_4g029190 | 53.952 | 291 | 134 | 0 | 28 | 318 | 50 | 340 | 1.28e-114 | 335 |
| MS.gene98878.t1 | MTR_7g026990 | 52.632 | 323 | 145 | 5 | 1 | 318 | 3 | 322 | 1.69e-113 | 332 |
| MS.gene98878.t1 | MTR_1g115900 | 54.487 | 312 | 135 | 5 | 11 | 318 | 13 | 321 | 5.01e-112 | 328 |
| MS.gene98878.t1 | MTR_5g021060 | 52.805 | 303 | 133 | 3 | 24 | 318 | 30 | 330 | 3.45e-111 | 326 |
| MS.gene98878.t1 | MTR_3g072190 | 62.698 | 252 | 92 | 1 | 67 | 318 | 2 | 251 | 5.76e-110 | 320 |
| MS.gene98878.t1 | MTR_3g467600 | 53.289 | 304 | 135 | 4 | 20 | 318 | 23 | 324 | 7.42e-109 | 320 |
| MS.gene98878.t1 | MTR_8g076820 | 52.475 | 303 | 134 | 3 | 24 | 318 | 30 | 330 | 6.93e-107 | 315 |
| MS.gene98878.t1 | MTR_4g074980 | 54.221 | 308 | 114 | 4 | 12 | 318 | 13 | 294 | 3.02e-105 | 309 |
| MS.gene98878.t1 | MTR_4g122640 | 47.904 | 334 | 158 | 3 | 1 | 318 | 3 | 336 | 1.09e-104 | 310 |
| MS.gene98878.t1 | MTR_7g093370 | 48.438 | 320 | 153 | 5 | 9 | 318 | 54 | 371 | 5.85e-104 | 309 |
| MS.gene98878.t1 | MTR_2g040000 | 50.307 | 326 | 143 | 6 | 8 | 318 | 10 | 331 | 1.02e-102 | 304 |
| MS.gene98878.t1 | MTR_5g017850 | 48.287 | 321 | 155 | 4 | 5 | 318 | 10 | 326 | 4.39e-100 | 297 |
| MS.gene98878.t1 | MTR_1g054205 | 48.148 | 324 | 151 | 6 | 6 | 318 | 9 | 326 | 8.34e-100 | 297 |
| MS.gene98878.t1 | MTR_5g017860 | 49.671 | 304 | 144 | 3 | 22 | 318 | 25 | 326 | 1.28e-99 | 296 |
| MS.gene98878.t1 | MTR_4g125940 | 50.804 | 311 | 138 | 5 | 19 | 318 | 23 | 329 | 1.89e-99 | 296 |
| MS.gene98878.t1 | MTR_5g014100 | 51.299 | 308 | 135 | 3 | 24 | 318 | 26 | 331 | 2.56e-99 | 296 |
| MS.gene98878.t1 | MTR_4g074980 | 60.166 | 241 | 94 | 2 | 12 | 250 | 13 | 253 | 3.25e-98 | 290 |
| MS.gene98878.t1 | MTR_1g022970 | 49.342 | 304 | 143 | 3 | 24 | 318 | 46 | 347 | 5.64e-98 | 293 |
| MS.gene98878.t1 | MTR_2g029750 | 48.867 | 309 | 147 | 4 | 19 | 318 | 24 | 330 | 3.27e-96 | 288 |
| MS.gene98878.t1 | MTR_2g029800 | 48.276 | 319 | 150 | 4 | 13 | 318 | 14 | 330 | 3.31e-96 | 288 |
| MS.gene98878.t1 | MTR_2g029860 | 47.826 | 322 | 154 | 4 | 9 | 318 | 11 | 330 | 5.33e-96 | 288 |
| MS.gene98878.t1 | MTR_5g074860 | 50.313 | 320 | 111 | 8 | 4 | 317 | 8 | 285 | 1.00e-95 | 285 |
| MS.gene98878.t1 | MTR_2g029560 | 46.440 | 323 | 160 | 5 | 5 | 318 | 7 | 325 | 4.73e-95 | 285 |
| MS.gene98878.t1 | MTR_2g029815 | 45.988 | 324 | 163 | 4 | 5 | 318 | 9 | 330 | 2.29e-93 | 281 |
| MS.gene98878.t1 | MTR_5g049280 | 44.479 | 326 | 169 | 4 | 4 | 318 | 13 | 337 | 2.62e-93 | 281 |
| MS.gene98878.t1 | MTR_2g028980 | 46.177 | 327 | 165 | 4 | 1 | 318 | 6 | 330 | 3.16e-93 | 281 |
| MS.gene98878.t1 | MTR_2g029730 | 46.130 | 323 | 163 | 3 | 5 | 318 | 6 | 326 | 8.70e-93 | 280 |
| MS.gene98878.t1 | MTR_2g029820 | 45.370 | 324 | 165 | 4 | 5 | 318 | 9 | 330 | 6.99e-92 | 278 |
| MS.gene98878.t1 | MTR_2g029740 | 46.602 | 309 | 154 | 4 | 19 | 318 | 24 | 330 | 3.49e-91 | 276 |
| MS.gene98878.t1 | MTR_4g125940 | 52.708 | 277 | 116 | 5 | 53 | 318 | 2 | 274 | 4.51e-91 | 273 |
| MS.gene98878.t1 | MTR_2g029830 | 45.955 | 309 | 156 | 3 | 19 | 318 | 23 | 329 | 1.14e-90 | 275 |
| MS.gene98878.t1 | MTR_4g031140 | 47.195 | 303 | 148 | 4 | 23 | 318 | 27 | 324 | 3.21e-90 | 273 |
| MS.gene98878.t1 | MTR_4g030890 | 45.806 | 310 | 156 | 4 | 16 | 318 | 92 | 396 | 7.29e-90 | 274 |
| MS.gene98878.t1 | MTR_2g029910 | 42.633 | 319 | 169 | 4 | 13 | 318 | 15 | 332 | 4.18e-85 | 260 |
| MS.gene98878.t1 | MTR_2g029850 | 44.817 | 328 | 166 | 4 | 4 | 318 | 5 | 330 | 4.57e-85 | 260 |
| MS.gene98878.t1 | MTR_1g077000 | 42.767 | 318 | 171 | 6 | 5 | 318 | 17 | 327 | 1.72e-82 | 253 |
| MS.gene98878.t1 | MTR_0155s0040 | 42.994 | 314 | 165 | 6 | 6 | 318 | 15 | 315 | 3.09e-82 | 251 |
| MS.gene98878.t1 | MTR_3g092990 | 40.498 | 321 | 178 | 4 | 9 | 318 | 8 | 326 | 1.41e-77 | 240 |
| MS.gene98878.t1 | MTR_7g029030 | 40.938 | 320 | 180 | 5 | 5 | 318 | 4 | 320 | 6.53e-77 | 238 |
| MS.gene98878.t1 | MTR_1g025980 | 41.049 | 324 | 177 | 6 | 1 | 317 | 1 | 317 | 2.18e-76 | 237 |
| MS.gene98878.t1 | MTR_4g046713 | 40.810 | 321 | 177 | 4 | 5 | 318 | 12 | 326 | 3.41e-76 | 236 |
| MS.gene98878.t1 | MTR_2g029830 | 46.512 | 258 | 127 | 3 | 70 | 318 | 6 | 261 | 3.42e-75 | 233 |
| MS.gene98878.t1 | MTR_2g008710 | 40.615 | 325 | 172 | 7 | 5 | 318 | 11 | 325 | 6.29e-75 | 233 |
| MS.gene98878.t1 | MTR_1g101830 | 40.683 | 322 | 171 | 7 | 5 | 318 | 13 | 322 | 6.61e-75 | 233 |
| MS.gene98878.t1 | MTR_1g086320 | 39.091 | 330 | 189 | 3 | 1 | 318 | 4 | 333 | 3.29e-74 | 231 |
| MS.gene98878.t1 | MTR_5g022870 | 40.373 | 322 | 176 | 7 | 5 | 318 | 3 | 316 | 3.63e-74 | 231 |
| MS.gene98878.t1 | MTR_4g114210 | 41.284 | 327 | 172 | 8 | 5 | 318 | 1 | 320 | 1.14e-73 | 230 |
| MS.gene98878.t1 | MTR_1g038680 | 41.860 | 301 | 164 | 4 | 28 | 318 | 33 | 332 | 1.17e-72 | 228 |
| MS.gene98878.t1 | MTR_2g088770 | 40.683 | 322 | 173 | 8 | 9 | 318 | 10 | 325 | 5.76e-72 | 226 |
| MS.gene98878.t1 | MTR_8g075100 | 41.254 | 303 | 163 | 6 | 23 | 318 | 25 | 319 | 1.01e-71 | 225 |
| MS.gene98878.t1 | MTR_7g107520 | 38.344 | 326 | 187 | 6 | 1 | 318 | 1 | 320 | 3.91e-69 | 218 |
| MS.gene98878.t1 | MTR_1g086490 | 38.166 | 338 | 188 | 5 | 1 | 318 | 4 | 340 | 5.65e-69 | 218 |
| MS.gene98878.t1 | MTR_1g009750 | 39.329 | 328 | 183 | 7 | 3 | 318 | 5 | 328 | 1.77e-68 | 217 |
| MS.gene98878.t1 | MTR_5g074700 | 50.661 | 227 | 94 | 6 | 95 | 318 | 3 | 214 | 2.28e-67 | 210 |
| MS.gene98878.t1 | MTR_3g092990 | 38.629 | 321 | 173 | 5 | 9 | 318 | 8 | 315 | 2.67e-67 | 213 |
| MS.gene98878.t1 | MTR_4g087965 | 39.934 | 303 | 170 | 5 | 23 | 314 | 41 | 342 | 1.93e-66 | 212 |
| MS.gene98878.t1 | MTR_4g133800 | 39.130 | 299 | 164 | 6 | 28 | 318 | 45 | 333 | 3.46e-66 | 211 |
| MS.gene98878.t1 | MTR_6g027440 | 37.658 | 316 | 187 | 5 | 5 | 318 | 7 | 314 | 3.75e-66 | 210 |
| MS.gene98878.t1 | MTR_7g086820 | 38.000 | 300 | 182 | 3 | 20 | 318 | 16 | 312 | 1.17e-65 | 209 |
| MS.gene98878.t1 | MTR_3g072210 | 56.684 | 187 | 77 | 3 | 134 | 318 | 54 | 238 | 1.39e-65 | 206 |
| MS.gene98878.t1 | MTR_6g043460 | 36.890 | 328 | 190 | 6 | 2 | 318 | 7 | 328 | 7.05e-65 | 208 |
| MS.gene98878.t1 | MTR_2g437770 | 40.924 | 303 | 160 | 7 | 24 | 318 | 50 | 341 | 1.15e-64 | 207 |
| MS.gene98878.t1 | MTR_1g090760 | 36.308 | 325 | 189 | 7 | 7 | 318 | 11 | 330 | 1.30e-64 | 207 |
| MS.gene98878.t1 | MTR_2g008160 | 39.172 | 314 | 172 | 7 | 17 | 318 | 17 | 323 | 1.87e-64 | 206 |
| MS.gene98878.t1 | MTR_5g016010 | 37.003 | 327 | 181 | 6 | 6 | 314 | 6 | 325 | 1.98e-64 | 206 |
| MS.gene98878.t1 | MTR_4g127670 | 37.987 | 308 | 172 | 6 | 23 | 318 | 23 | 323 | 6.89e-64 | 205 |
| MS.gene98878.t1 | MTR_7g086870 | 36.242 | 298 | 183 | 4 | 22 | 318 | 20 | 311 | 1.12e-63 | 204 |
| MS.gene98878.t1 | MTR_6g043280 | 39.799 | 299 | 169 | 5 | 24 | 318 | 41 | 332 | 1.68e-63 | 204 |
| MS.gene98878.t1 | MTR_4g132490 | 34.304 | 309 | 197 | 2 | 15 | 318 | 20 | 327 | 1.69e-63 | 204 |
| MS.gene98878.t1 | MTR_2g077990 | 36.364 | 330 | 172 | 6 | 22 | 314 | 74 | 402 | 5.65e-63 | 205 |
| MS.gene98878.t1 | MTR_2g078610 | 36.061 | 330 | 173 | 6 | 22 | 314 | 74 | 402 | 8.57e-63 | 204 |
| MS.gene98878.t1 | MTR_2g099175 | 36.145 | 332 | 187 | 7 | 5 | 318 | 11 | 335 | 3.20e-62 | 201 |
| MS.gene98878.t1 | MTR_1g066710 | 36.213 | 301 | 186 | 4 | 22 | 318 | 25 | 323 | 4.26e-62 | 200 |
| MS.gene98878.t1 | MTR_8g062780 | 36.909 | 317 | 193 | 4 | 9 | 318 | 8 | 324 | 1.57e-61 | 199 |
| MS.gene98878.t1 | MTR_4g095450 | 35.604 | 323 | 189 | 6 | 4 | 314 | 5 | 320 | 1.78e-61 | 199 |
| MS.gene98878.t1 | MTR_2g067440 | 35.045 | 331 | 178 | 6 | 22 | 317 | 58 | 386 | 2.62e-61 | 200 |
| MS.gene98878.t1 | MTR_0286s0010 | 34.277 | 318 | 191 | 5 | 13 | 318 | 23 | 334 | 2.56e-60 | 196 |
| MS.gene98878.t1 | MTR_6g008075 | 34.277 | 318 | 191 | 5 | 13 | 318 | 23 | 334 | 2.56e-60 | 196 |
| MS.gene98878.t1 | MTR_7g072490 | 45.868 | 242 | 75 | 2 | 70 | 311 | 2 | 187 | 1.19e-59 | 190 |
| MS.gene98878.t1 | MTR_2g008730 | 44.672 | 244 | 120 | 5 | 86 | 318 | 62 | 301 | 1.25e-59 | 193 |
| MS.gene98878.t1 | MTR_1g066640 | 35.000 | 300 | 191 | 3 | 22 | 318 | 25 | 323 | 1.38e-58 | 191 |
| MS.gene98878.t1 | MTR_3g105790 | 35.474 | 327 | 194 | 4 | 2 | 318 | 3 | 322 | 4.31e-58 | 190 |
| MS.gene98878.t1 | MTR_1g066680 | 34.333 | 300 | 192 | 4 | 22 | 318 | 25 | 322 | 4.50e-58 | 190 |
| MS.gene98878.t1 | MTR_1g009750 | 37.117 | 326 | 176 | 8 | 3 | 318 | 5 | 311 | 6.39e-58 | 189 |
| MS.gene98878.t1 | MTR_1g066380 | 34.333 | 300 | 193 | 3 | 22 | 318 | 25 | 323 | 7.83e-58 | 189 |
| MS.gene98878.t1 | MTR_6g043240 | 36.242 | 298 | 179 | 6 | 24 | 318 | 42 | 331 | 7.87e-58 | 190 |
| MS.gene98878.t1 | MTR_2g078280 | 35.625 | 320 | 168 | 6 | 22 | 304 | 74 | 392 | 5.87e-57 | 189 |
| MS.gene98878.t1 | MTR_4g132110 | 33.439 | 314 | 203 | 4 | 6 | 314 | 12 | 324 | 1.39e-55 | 184 |
| MS.gene98878.t1 | MTR_2g008160 | 36.688 | 308 | 153 | 7 | 17 | 318 | 17 | 288 | 9.85e-54 | 177 |
| MS.gene98878.t1 | MTR_4g132110 | 32.915 | 319 | 203 | 5 | 6 | 314 | 12 | 329 | 3.00e-53 | 178 |
| MS.gene98878.t1 | MTR_5g033470 | 34.700 | 317 | 185 | 7 | 18 | 318 | 67 | 377 | 1.10e-49 | 169 |
| MS.gene98878.t1 | MTR_0147s0010 | 31.579 | 323 | 180 | 6 | 21 | 317 | 74 | 381 | 4.09e-48 | 166 |
| MS.gene98878.t1 | MTR_3g072260 | 62.500 | 128 | 43 | 1 | 9 | 131 | 6 | 133 | 6.88e-47 | 155 |
| MS.gene98878.t1 | MTR_1g066380 | 33.858 | 254 | 164 | 3 | 68 | 318 | 3 | 255 | 3.83e-46 | 157 |
| MS.gene98878.t1 | MTR_2g067450 | 32.903 | 310 | 185 | 8 | 22 | 317 | 9 | 309 | 1.74e-45 | 157 |
| MS.gene98878.t1 | MTR_2g008160 | 43.085 | 188 | 103 | 3 | 17 | 204 | 17 | 200 | 1.94e-42 | 145 |
| MS.gene98878.t1 | MTR_3g105790 | 35.685 | 241 | 144 | 2 | 87 | 318 | 8 | 246 | 2.93e-39 | 139 |
| MS.gene98878.t1 | MTR_2g029880 | 40.625 | 192 | 93 | 4 | 136 | 318 | 9 | 188 | 9.99e-38 | 134 |
| MS.gene98878.t1 | MTR_5g074770 | 53.333 | 90 | 39 | 2 | 230 | 317 | 20 | 108 | 6.33e-26 | 99.8 |
| MS.gene98878.t1 | MTR_2g077980 | 30.496 | 282 | 140 | 9 | 86 | 318 | 11 | 285 | 1.55e-25 | 103 |
| MS.gene98878.t1 | MTR_2g078560 | 30.180 | 222 | 119 | 4 | 129 | 314 | 95 | 316 | 2.29e-24 | 101 |
| MS.gene98878.t1 | MTR_4g031040 | 37.500 | 168 | 66 | 4 | 85 | 252 | 3 | 131 | 6.28e-23 | 92.8 |
| MS.gene98878.t1 | MTR_3g462850 | 38.028 | 142 | 76 | 4 | 188 | 318 | 9 | 149 | 1.10e-21 | 89.7 |
| MS.gene98878.t1 | MTR_5g058120 | 33.548 | 155 | 97 | 2 | 160 | 314 | 7 | 155 | 2.49e-21 | 91.7 |
| MS.gene98878.t1 | MTR_7g086790 | 40.000 | 120 | 68 | 2 | 71 | 190 | 17 | 132 | 3.55e-21 | 89.7 |
| MS.gene98878.t1 | MTR_4g114220 | 40.000 | 130 | 54 | 4 | 44 | 165 | 23 | 136 | 6.92e-20 | 84.7 |
| MS.gene98878.t1 | MTR_6g048160 | 56.944 | 72 | 27 | 2 | 63 | 134 | 22 | 89 | 1.52e-19 | 82.0 |
| MS.gene98878.t1 | MTR_1g089005 | 38.971 | 136 | 72 | 3 | 6 | 135 | 1 | 131 | 1.29e-17 | 79.0 |
| MS.gene98878.t1 | MTR_1g098320 | 44.737 | 76 | 42 | 0 | 239 | 314 | 45 | 120 | 4.96e-16 | 74.3 |
| MS.gene98878.t1 | MTR_3g107060 | 27.237 | 257 | 120 | 8 | 56 | 297 | 106 | 310 | 1.11e-15 | 76.6 |
| MS.gene98878.t1 | MTR_2g029930 | 35.652 | 115 | 42 | 4 | 11 | 107 | 2 | 102 | 2.84e-14 | 68.2 |
| MS.gene98878.t1 | MTR_7g107500 | 41.667 | 84 | 48 | 1 | 235 | 318 | 15 | 97 | 3.45e-13 | 65.1 |
| MS.gene98878.t1 | MTR_7g086810 | 32.787 | 122 | 56 | 1 | 20 | 141 | 2 | 97 | 3.54e-13 | 68.6 |
| MS.gene98878.t1 | MTR_3g088160 | 25.856 | 263 | 146 | 8 | 58 | 300 | 121 | 354 | 5.86e-13 | 69.3 |
| MS.gene98878.t1 | MTR_3g088160 | 25.856 | 263 | 146 | 8 | 58 | 300 | 121 | 354 | 5.94e-13 | 69.3 |
| MS.gene98878.t1 | MTR_7g086785 | 38.889 | 72 | 43 | 1 | 70 | 141 | 4 | 74 | 4.49e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98878.t1 | AT5G05340 | 72.727 | 297 | 81 | 0 | 22 | 318 | 28 | 324 | 4.49e-162 | 455 |
| MS.gene98878.t1 | AT5G58400 | 66.129 | 310 | 103 | 2 | 11 | 318 | 16 | 325 | 1.51e-144 | 410 |
| MS.gene98878.t1 | AT5G58390 | 62.540 | 315 | 117 | 1 | 5 | 318 | 2 | 316 | 6.99e-138 | 393 |
| MS.gene98878.t1 | AT1G14550 | 56.508 | 315 | 128 | 5 | 11 | 318 | 9 | 321 | 2.90e-118 | 343 |
| MS.gene98878.t1 | AT4G36430 | 52.500 | 320 | 141 | 4 | 7 | 318 | 14 | 330 | 1.52e-114 | 334 |
| MS.gene98878.t1 | AT1G14540 | 53.628 | 317 | 141 | 4 | 6 | 318 | 1 | 315 | 2.05e-113 | 331 |
| MS.gene98878.t1 | AT2G18150 | 51.456 | 309 | 140 | 3 | 18 | 318 | 30 | 336 | 2.79e-111 | 326 |
| MS.gene98878.t1 | AT2G18140 | 50.323 | 310 | 144 | 3 | 17 | 318 | 28 | 335 | 1.84e-107 | 317 |
| MS.gene98878.t1 | AT5G06720 | 48.457 | 324 | 154 | 4 | 6 | 318 | 12 | 333 | 9.13e-107 | 315 |
| MS.gene98878.t1 | AT5G66390 | 49.689 | 322 | 151 | 4 | 6 | 318 | 14 | 333 | 9.13e-107 | 315 |
| MS.gene98878.t1 | AT1G44970 | 51.935 | 310 | 138 | 3 | 18 | 318 | 39 | 346 | 4.32e-105 | 311 |
| MS.gene98878.t1 | AT3G50990 | 50.974 | 308 | 141 | 4 | 19 | 318 | 36 | 341 | 8.62e-104 | 308 |
| MS.gene98878.t1 | AT5G06730 | 48.137 | 322 | 152 | 5 | 9 | 318 | 16 | 334 | 3.38e-103 | 306 |
| MS.gene98878.t1 | AT5G19890 | 50.154 | 325 | 141 | 7 | 5 | 318 | 13 | 327 | 6.48e-101 | 300 |
| MS.gene98878.t1 | AT4G16270 | 52.013 | 298 | 131 | 4 | 29 | 318 | 55 | 348 | 2.31e-99 | 296 |
| MS.gene98878.t1 | AT2G35380 | 48.788 | 330 | 149 | 4 | 7 | 318 | 8 | 335 | 2.62e-99 | 296 |
| MS.gene98878.t1 | AT3G32980 | 47.706 | 327 | 156 | 5 | 3 | 318 | 12 | 334 | 8.98e-98 | 293 |
| MS.gene98878.t1 | AT4G08770 | 48.254 | 315 | 150 | 4 | 15 | 318 | 15 | 327 | 1.39e-97 | 292 |
| MS.gene98878.t1 | AT2G38380 | 47.152 | 316 | 155 | 5 | 13 | 318 | 20 | 333 | 1.18e-96 | 290 |
| MS.gene98878.t1 | AT4G08780 | 47.134 | 314 | 153 | 4 | 16 | 318 | 16 | 327 | 2.02e-96 | 289 |
| MS.gene98878.t1 | AT1G68850 | 44.625 | 307 | 157 | 4 | 24 | 318 | 30 | 335 | 4.41e-96 | 288 |
| MS.gene98878.t1 | AT2G38390 | 46.203 | 316 | 158 | 5 | 13 | 318 | 20 | 333 | 3.02e-95 | 286 |
| MS.gene98878.t1 | AT1G49570 | 48.675 | 302 | 145 | 3 | 22 | 314 | 46 | 346 | 7.70e-94 | 282 |
| MS.gene98878.t1 | AT3G49120 | 46.769 | 325 | 159 | 5 | 5 | 318 | 14 | 335 | 1.05e-91 | 277 |
| MS.gene98878.t1 | AT3G49110 | 45.538 | 325 | 156 | 5 | 5 | 318 | 22 | 336 | 4.80e-91 | 275 |
| MS.gene98878.t1 | AT5G19880 | 44.308 | 325 | 166 | 5 | 7 | 318 | 7 | 329 | 5.63e-87 | 264 |
| MS.gene98878.t1 | AT2G22420 | 42.769 | 325 | 171 | 5 | 1 | 318 | 3 | 319 | 1.84e-85 | 260 |
| MS.gene98878.t1 | AT3G01190 | 41.538 | 325 | 175 | 6 | 2 | 318 | 4 | 321 | 7.06e-79 | 243 |
| MS.gene98878.t1 | AT5G64120 | 40.549 | 328 | 173 | 8 | 5 | 318 | 9 | 328 | 1.50e-78 | 243 |
| MS.gene98878.t1 | AT4G33420 | 44.595 | 296 | 156 | 5 | 24 | 318 | 37 | 325 | 9.43e-78 | 240 |
| MS.gene98878.t1 | AT4G33420 | 44.595 | 296 | 156 | 5 | 24 | 318 | 84 | 372 | 4.23e-77 | 240 |
| MS.gene98878.t1 | AT1G05240 | 41.196 | 301 | 162 | 5 | 24 | 314 | 26 | 321 | 1.02e-76 | 238 |
| MS.gene98878.t1 | AT1G05250 | 41.196 | 301 | 162 | 5 | 24 | 314 | 26 | 321 | 1.02e-76 | 238 |
| MS.gene98878.t1 | AT5G51890 | 39.692 | 325 | 184 | 5 | 1 | 318 | 3 | 322 | 1.01e-75 | 235 |
| MS.gene98878.t1 | AT2G41480 | 42.462 | 325 | 167 | 8 | 7 | 318 | 11 | 328 | 1.41e-75 | 235 |
| MS.gene98878.t1 | AT2G35380 | 50.407 | 246 | 107 | 3 | 86 | 318 | 4 | 247 | 1.86e-75 | 232 |
| MS.gene98878.t1 | AT5G42180 | 41.667 | 324 | 165 | 6 | 6 | 317 | 5 | 316 | 1.45e-74 | 232 |
| MS.gene98878.t1 | AT5G17820 | 41.009 | 317 | 167 | 6 | 10 | 318 | 9 | 313 | 6.03e-74 | 230 |
| MS.gene98878.t1 | AT5G15180 | 40.000 | 325 | 176 | 7 | 8 | 318 | 10 | 329 | 1.07e-73 | 230 |
| MS.gene98878.t1 | AT5G17820 | 41.009 | 317 | 167 | 6 | 10 | 318 | 62 | 366 | 6.09e-73 | 229 |
| MS.gene98878.t1 | AT1G71695 | 40.468 | 299 | 171 | 4 | 24 | 318 | 44 | 339 | 2.78e-72 | 228 |
| MS.gene98878.t1 | AT3G03670 | 39.937 | 318 | 175 | 4 | 11 | 318 | 10 | 321 | 7.27e-72 | 225 |
| MS.gene98878.t1 | AT5G14130 | 37.267 | 322 | 190 | 4 | 5 | 318 | 13 | 330 | 7.55e-71 | 223 |
| MS.gene98878.t1 | AT5G14130 | 37.267 | 322 | 190 | 4 | 5 | 318 | 54 | 371 | 2.17e-70 | 223 |
| MS.gene98878.t1 | AT5G39580 | 41.946 | 298 | 159 | 7 | 28 | 318 | 29 | 319 | 1.62e-69 | 219 |
| MS.gene98878.t1 | AT4G37530 | 38.994 | 318 | 172 | 5 | 16 | 318 | 19 | 329 | 3.86e-69 | 218 |
| MS.gene98878.t1 | AT4G11290 | 39.875 | 321 | 177 | 7 | 11 | 318 | 9 | 326 | 7.44e-69 | 218 |
| MS.gene98878.t1 | AT5G40150 | 37.171 | 304 | 185 | 4 | 19 | 318 | 27 | 328 | 2.20e-68 | 216 |
| MS.gene98878.t1 | AT5G67400 | 37.952 | 332 | 184 | 6 | 6 | 318 | 1 | 329 | 1.27e-67 | 214 |
| MS.gene98878.t1 | AT1G05260 | 37.771 | 323 | 188 | 6 | 5 | 318 | 7 | 325 | 1.45e-67 | 214 |
| MS.gene98878.t1 | AT4G37520 | 37.500 | 312 | 173 | 5 | 22 | 318 | 25 | 329 | 2.26e-66 | 211 |
| MS.gene98878.t1 | AT4G17690 | 38.796 | 299 | 179 | 3 | 23 | 318 | 25 | 322 | 8.61e-66 | 210 |
| MS.gene98878.t1 | AT3G21770 | 38.361 | 305 | 175 | 6 | 19 | 314 | 24 | 324 | 1.02e-65 | 210 |
| MS.gene98878.t1 | AT3G49960 | 36.778 | 329 | 186 | 6 | 5 | 318 | 8 | 329 | 4.98e-65 | 208 |
| MS.gene98878.t1 | AT4G25980 | 37.188 | 320 | 181 | 7 | 12 | 318 | 14 | 326 | 6.74e-65 | 207 |
| MS.gene98878.t1 | AT5G47000 | 38.125 | 320 | 190 | 5 | 5 | 318 | 13 | 330 | 9.22e-65 | 207 |
| MS.gene98878.t1 | AT4G31760 | 38.170 | 317 | 181 | 4 | 11 | 318 | 16 | 326 | 9.62e-65 | 207 |
| MS.gene98878.t1 | AT2G18980 | 37.812 | 320 | 181 | 6 | 10 | 318 | 11 | 323 | 1.63e-64 | 206 |
| MS.gene98878.t1 | AT4G33870 | 33.735 | 332 | 177 | 4 | 24 | 314 | 68 | 397 | 1.67e-64 | 209 |
| MS.gene98878.t1 | AT3G28200 | 35.410 | 305 | 188 | 4 | 19 | 318 | 16 | 316 | 2.84e-64 | 206 |
| MS.gene98878.t1 | AT1G34510 | 38.284 | 303 | 178 | 6 | 17 | 318 | 15 | 309 | 4.18e-64 | 205 |
| MS.gene98878.t1 | AT4G37520 | 37.179 | 312 | 171 | 6 | 22 | 318 | 25 | 326 | 4.68e-64 | 205 |
| MS.gene98878.t1 | AT4G30170 | 38.312 | 308 | 172 | 5 | 22 | 318 | 25 | 325 | 7.97e-64 | 205 |
| MS.gene98878.t1 | AT5G64110 | 39.222 | 334 | 177 | 8 | 3 | 318 | 5 | 330 | 8.07e-64 | 205 |
| MS.gene98878.t1 | AT1G30870 | 39.344 | 305 | 165 | 6 | 24 | 318 | 51 | 345 | 1.83e-63 | 204 |
| MS.gene98878.t1 | AT1G77100 | 38.769 | 325 | 181 | 9 | 6 | 318 | 1 | 319 | 1.89e-63 | 204 |
| MS.gene98878.t1 | AT2G34060 | 41.368 | 307 | 166 | 7 | 21 | 315 | 39 | 343 | 5.10e-63 | 203 |
| MS.gene98878.t1 | AT4G26010 | 38.538 | 301 | 176 | 5 | 19 | 318 | 17 | 309 | 5.49e-63 | 202 |
| MS.gene98878.t1 | AT5G64100 | 38.323 | 334 | 176 | 8 | 5 | 318 | 8 | 331 | 8.12e-63 | 202 |
| MS.gene98878.t1 | AT4G26010 | 38.538 | 301 | 176 | 5 | 19 | 318 | 45 | 337 | 9.46e-63 | 202 |
| MS.gene98878.t1 | AT2G24800 | 38.235 | 306 | 175 | 3 | 22 | 318 | 29 | 329 | 2.62e-62 | 201 |
| MS.gene98878.t1 | AT1G24110 | 36.000 | 325 | 193 | 7 | 6 | 318 | 1 | 322 | 1.37e-60 | 196 |
| MS.gene98878.t1 | AT2G39040 | 38.730 | 315 | 175 | 8 | 18 | 318 | 40 | 350 | 7.17e-59 | 192 |
| MS.gene98878.t1 | AT4G37530 | 40.449 | 267 | 137 | 5 | 16 | 267 | 19 | 278 | 1.01e-58 | 190 |
| MS.gene98878.t1 | AT2G43480 | 35.220 | 318 | 184 | 7 | 15 | 318 | 26 | 335 | 1.45e-58 | 191 |
| MS.gene98878.t1 | AT4G21960 | 33.660 | 306 | 199 | 3 | 16 | 318 | 23 | 327 | 1.21e-57 | 189 |
| MS.gene98878.t1 | AT2G37130 | 35.099 | 302 | 191 | 4 | 21 | 318 | 27 | 327 | 1.47e-56 | 186 |
| MS.gene98878.t1 | AT5G24070 | 34.641 | 306 | 177 | 7 | 28 | 318 | 38 | 335 | 8.26e-56 | 184 |
| MS.gene98878.t1 | AT2G37130 | 35.570 | 298 | 183 | 5 | 27 | 318 | 2 | 296 | 1.17e-55 | 183 |
| MS.gene98878.t1 | AT5G22410 | 35.849 | 318 | 182 | 11 | 12 | 316 | 15 | 323 | 4.73e-53 | 177 |
| MS.gene98878.t1 | AT3G17070 | 30.675 | 326 | 210 | 5 | 8 | 318 | 15 | 339 | 5.40e-46 | 159 |
| MS.gene98878.t1 | AT5G39580 | 39.234 | 209 | 118 | 4 | 28 | 236 | 29 | 228 | 1.00e-41 | 145 |
| MS.gene98878.t1 | AT4G25980 | 42.222 | 180 | 100 | 3 | 12 | 191 | 59 | 234 | 1.69e-40 | 143 |
| MS.gene98878.t1 | AT2G24800 | 43.452 | 168 | 91 | 1 | 22 | 189 | 29 | 192 | 1.76e-38 | 137 |
| MS.gene98878.t1 | AT3G17070 | 30.268 | 261 | 172 | 5 | 66 | 318 | 18 | 276 | 1.36e-32 | 122 |
| MS.gene98878.t1 | AT4G32320 | 29.779 | 272 | 122 | 8 | 43 | 297 | 100 | 319 | 1.45e-17 | 82.4 |
| MS.gene98878.t1 | AT3G42570 | 37.363 | 91 | 56 | 1 | 100 | 189 | 57 | 147 | 3.30e-13 | 66.6 |
| MS.gene98878.t1 | AT4G08390 | 27.317 | 205 | 120 | 6 | 105 | 300 | 176 | 360 | 2.70e-12 | 67.4 |
| MS.gene98878.t1 | AT4G08390 | 27.317 | 205 | 120 | 6 | 105 | 300 | 176 | 360 | 2.70e-12 | 67.4 |
| MS.gene98878.t1 | AT4G08390 | 27.317 | 205 | 120 | 6 | 105 | 300 | 176 | 360 | 2.70e-12 | 67.4 |
| MS.gene98878.t1 | AT4G08390 | 27.317 | 205 | 120 | 6 | 105 | 300 | 175 | 359 | 3.21e-12 | 67.0 |
| MS.gene98878.t1 | AT4G35970 | 32.192 | 146 | 77 | 4 | 58 | 196 | 33 | 163 | 2.94e-11 | 62.8 |
| MS.gene98878.t1 | AT4G35970 | 25.197 | 254 | 133 | 8 | 58 | 300 | 33 | 240 | 4.06e-11 | 63.2 |
Find 88 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTCTGGGGATAATAATT+TGG | 0.288379 | 5.2:+71788467 | MS.gene98878:CDS |
| TTCACAGTGTCAAATAGTTT+TGG | 0.292450 | 5.2:-71786208 | None:intergenic |
| GAGAGATAAGAAAGAATTGC+AGG | 0.319158 | 5.2:+71788709 | MS.gene98878:CDS |
| TGGACTTTCCACCAAGGATT+TGG | 0.319515 | 5.2:+71787478 | MS.gene98878:CDS |
| TGCCCCAAGACATCAGGTTC+TGG | 0.322210 | 5.2:+71788453 | MS.gene98878:CDS |
| TTGAGGCTTGAAGTGGGTGC+TGG | 0.334026 | 5.2:-71787428 | None:intergenic |
| CAAGTTTCACATCCCATGTT+GGG | 0.349153 | 5.2:-71787355 | None:intergenic |
| CAATTGATACAAGAACTAAA+AGG | 0.357497 | 5.2:-71786138 | None:intergenic |
| ATCTCAAGGTTTAATGCTCT+TGG | 0.358777 | 5.2:+71787458 | MS.gene98878:CDS |
| TTTGCTCGCACAAGGCAATC+AGG | 0.386172 | 5.2:+71788429 | MS.gene98878:CDS |
| CAAGCTATATTCATGCACTA+TGG | 0.398480 | 5.2:-71788607 | None:intergenic |
| AAGGATTTGGTCGCATTGTC+TGG | 0.403525 | 5.2:+71787491 | MS.gene98878:CDS |
| TGCCAATCCCAACAGAAATT+CGG | 0.407832 | 5.2:+71786988 | MS.gene98878:CDS |
| TCCCCAGAACCTGATGTCTT+GGG | 0.411434 | 5.2:-71788456 | None:intergenic |
| ATCCCCAGAACCTGATGTCT+TGG | 0.425960 | 5.2:-71788457 | None:intergenic |
| CATGCGGGTCTCCTTTGATA+TGG | 0.427995 | 5.2:-71786248 | None:intergenic |
| GGACTAGGTGGTCACACAAT+TGG | 0.433074 | 5.2:+71788345 | MS.gene98878:intron |
| TCTTATCTCTCCATTTGAAC+CGG | 0.435627 | 5.2:-71788697 | None:intergenic |
| GCCCCAAGACATCAGGTTCT+GGG | 0.441232 | 5.2:+71788454 | MS.gene98878:CDS |
| CCACGGGCCGAATTTCTGTT+GGG | 0.448742 | 5.2:-71786995 | None:intergenic |
| CCAAGTTTCACATCCCATGT+TGG | 0.448886 | 5.2:-71787356 | None:intergenic |
| TGAGGCTTGAAGTGGGTGCT+GGG | 0.458400 | 5.2:-71787427 | None:intergenic |
| GGCCGAATTTCTGTTGGGAT+TGG | 0.459419 | 5.2:-71786990 | None:intergenic |
| CAAGAACCTAGTTGACAGTA+AGG | 0.460120 | 5.2:+71788536 | MS.gene98878:CDS |
| AGTCCCCTCACCGGTTCAAA+TGG | 0.471090 | 5.2:+71788687 | MS.gene98878:CDS |
| CATTAAACCTTGAGATGAGT+TGG | 0.479053 | 5.2:-71787451 | None:intergenic |
| CTCTCCATTTGAACCGGTGA+GGG | 0.479821 | 5.2:-71788691 | None:intergenic |
| ATCTTTCGAAAGATTAGCAT+TGG | 0.480051 | 5.2:-71786167 | None:intergenic |
| GCTTAAATTTCCCAGCTTGG+AGG | 0.480636 | 5.2:+71787332 | MS.gene98878:intron |
| TCAGGGTGCCCCAAGACATC+AGG | 0.480815 | 5.2:+71788447 | MS.gene98878:CDS |
| ATCCACCATTGAAGAGTTGT+TGG | 0.491131 | 5.2:-71788575 | None:intergenic |
| ACGTTGGTGTTGCAAGATCA+AGG | 0.493377 | 5.2:-71788494 | None:intergenic |
| CCAACATGGGATGTGAAACT+TGG | 0.494973 | 5.2:+71787356 | MS.gene98878:CDS |
| TCCGACCAACAACTCTTCAA+TGG | 0.503794 | 5.2:+71788570 | MS.gene98878:CDS |
| TCCACGGGCCGAATTTCTGT+TGG | 0.507509 | 5.2:-71786996 | None:intergenic |
| AATTGATACAAGAACTAAAA+GGG | 0.507577 | 5.2:-71786137 | None:intergenic |
| ACCTTGAGATGAGTTGGTTG+AGG | 0.512766 | 5.2:-71787445 | None:intergenic |
| CCCAGCTTGGAGGCCCAACA+TGG | 0.520178 | 5.2:+71787342 | MS.gene98878:intron |
| AATGTCTCCCATCTTGATCA+TGG | 0.525103 | 5.2:-71788664 | None:intergenic |
| GTCGATCACTTCGAATCCAC+GGG | 0.532124 | 5.2:-71787011 | None:intergenic |
| AGACAATGCGACCAAATCCT+TGG | 0.535960 | 5.2:-71787489 | None:intergenic |
| GATGACACATCAAGCTTCAC+CGG | 0.536161 | 5.2:+71786956 | MS.gene98878:CDS |
| TGAAGAGTTGTTGGTCGGAG+TGG | 0.547022 | 5.2:-71788566 | None:intergenic |
| AAACCATTGTAGGGATGTGA+TGG | 0.548386 | 5.2:+71786920 | MS.gene98878:intron |
| CGTCACCGCCATGATCAAGA+TGG | 0.548522 | 5.2:+71788656 | MS.gene98878:CDS |
| CTTGAAATAGTGATTGTCAA+AGG | 0.552423 | 5.2:-71788517 | None:intergenic |
| AACAGAGTCTCTAGCAGTGA+TGG | 0.555738 | 5.2:-71787095 | None:intergenic |
| AGCAAAGGAAGTATCTATGT+TGG | 0.559906 | 5.2:-71788412 | None:intergenic |
| ATACTTCCTTTGCTCGCACA+AGG | 0.564893 | 5.2:+71788421 | MS.gene98878:CDS |
| CAATGCGACCAAATCCTTGG+TGG | 0.568698 | 5.2:-71787486 | None:intergenic |
| TAGAAGAGAAGCACCCATGC+GGG | 0.569776 | 5.2:-71786263 | None:intergenic |
| GCCTCAACCAACTCATCTCA+AGG | 0.573068 | 5.2:+71787444 | MS.gene98878:CDS |
| TGTCGATCACTTCGAATCCA+CGG | 0.573405 | 5.2:-71787012 | None:intergenic |
| TTGCTCGCACAAGGCAATCA+GGG | 0.574883 | 5.2:+71788430 | MS.gene98878:CDS |
| CGTTGGTGTTGCAAGATCAA+GGG | 0.577092 | 5.2:-71788493 | None:intergenic |
| ACCATTGAAGAGTTGTTGGT+CGG | 0.577335 | 5.2:-71788571 | None:intergenic |
| CATATCAAAGGAGACCCGCA+TGG | 0.578197 | 5.2:+71786249 | MS.gene98878:CDS |
| TTCATGCACTATGGAATCAG+TGG | 0.582013 | 5.2:-71788598 | None:intergenic |
| CCCAACAGAAATTCGGCCCG+TGG | 0.584922 | 5.2:+71786995 | MS.gene98878:CDS |
| GAGTTGGTTGAGGCTTGAAG+TGG | 0.587942 | 5.2:-71787435 | None:intergenic |
| TGATTGCCTTGTGCGAGCAA+AGG | 0.592651 | 5.2:-71788427 | None:intergenic |
| GTCACCGCCATGATCAAGAT+GGG | 0.592934 | 5.2:+71788657 | MS.gene98878:CDS |
| CCCCAGAACCTGATGTCTTG+GGG | 0.596331 | 5.2:-71788455 | None:intergenic |
| AGTCTCTAGCAGTGATGGTG+AGG | 0.603184 | 5.2:-71787090 | None:intergenic |
| GCAGTGGAGAAAGTATGTCC+AGG | 0.603574 | 5.2:+71787046 | MS.gene98878:CDS |
| TCAGCGCATGAAACTGCACC+TGG | 0.605024 | 5.2:-71787064 | None:intergenic |
| GTAGTCCCTTACTGTCAACT+AGG | 0.605278 | 5.2:-71788542 | None:intergenic |
| GACCAACAACTCTTCAATGG+TGG | 0.606439 | 5.2:+71788573 | MS.gene98878:CDS |
| CCAGCTTGGAGGCCCAACAT+GGG | 0.607919 | 5.2:+71787343 | MS.gene98878:intron |
| GTCACACAATTGGACAAGCA+AGG | 0.609025 | 5.2:+71788355 | MS.gene98878:CDS |
| AGTTCAATCTGCCATATCAA+AGG | 0.613488 | 5.2:+71786237 | MS.gene98878:CDS |
| AGTAAATCAGCTGCAAACAA+TGG | 0.614802 | 5.2:+71787401 | MS.gene98878:CDS |
| GTACATTAACAAAGCAATCG+TGG | 0.614906 | 5.2:-71786297 | None:intergenic |
| AGTTGGTTGAGGCTTGAAGT+GGG | 0.615516 | 5.2:-71787434 | None:intergenic |
| TGTTGGAGTCGTTGTAAATG+TGG | 0.616544 | 5.2:-71788395 | None:intergenic |
| CGACAAAATCAAGTCAGCAG+TGG | 0.616805 | 5.2:+71787030 | MS.gene98878:CDS |
| CCCCAAGACATCAGGTTCTG+GGG | 0.622498 | 5.2:+71788455 | MS.gene98878:CDS |
| AAGAACCTAGTTGACAGTAA+GGG | 0.623353 | 5.2:+71788537 | MS.gene98878:CDS |
| TCTCTCCATTTGAACCGGTG+AGG | 0.624609 | 5.2:-71788692 | None:intergenic |
| GGAGACATTAGTCCCCTCAC+CGG | 0.627716 | 5.2:+71788678 | MS.gene98878:CDS |
| TCTCCATTTGAACCGGTGAG+GGG | 0.638254 | 5.2:-71788690 | None:intergenic |
| ATATCAAAGGAGACCCGCAT+GGG | 0.639894 | 5.2:+71786250 | MS.gene98878:CDS |
| TGCTCTTGGACTTTCCACCA+AGG | 0.642254 | 5.2:+71787472 | MS.gene98878:CDS |
| GTTGGTGTTGCAAGATCAAG+GGG | 0.649121 | 5.2:-71788492 | None:intergenic |
| TAGTGATTGTCAAAGGACGT+TGG | 0.680187 | 5.2:-71788510 | None:intergenic |
| CATGGCGGTGACGAAATCAG+AGG | 0.705431 | 5.2:-71788646 | None:intergenic |
| GTCTCCCATCTTGATCATGG+CGG | 0.710146 | 5.2:-71788661 | None:intergenic |
| GTAGAAGAGAAGCACCCATG+CGG | 0.717536 | 5.2:-71786264 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAAAAAGTTAAAAGT+AGG | - | chr5.2:71786581-71786600 | None:intergenic | 10.0% |
| !! | TAAAAAATTAATGTGATCAT+AGG | + | chr5.2:71786730-71786749 | MS.gene98878:intron | 15.0% |
| !!! | AAATAAGTGATTTAATTTGA+CGG | - | chr5.2:71788019-71788038 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTAAATGATACT+TGG | + | chr5.2:71788324-71788343 | MS.gene98878:intron | 15.0% |
| !!! | TATTTAACAATATTGACTTA+TGG | + | chr5.2:71786626-71786645 | MS.gene98878:intron | 15.0% |
| !!! | TTAAATCACTTATTTTAAGA+CGG | + | chr5.2:71788024-71788043 | MS.gene98878:intron | 15.0% |
| !!! | TTTATTCTCTAAAATGTATA+GGG | - | chr5.2:71787202-71787221 | None:intergenic | 15.0% |
| !! | AATCAATAGAATGTATTTGT+CGG | - | chr5.2:71787537-71787556 | None:intergenic | 20.0% |
| !! | AATGTAATTGAATGTAAGTA+AGG | - | chr5.2:71786338-71786357 | None:intergenic | 20.0% |
| !! | AATTGATACAAGAACTAAAA+GGG | - | chr5.2:71786140-71786159 | None:intergenic | 20.0% |
| !! | ATGTAATTGAATGTAAGTAA+GGG | - | chr5.2:71786337-71786356 | None:intergenic | 20.0% |
| !! | CTTATTTATAAGACACATTT+GGG | - | chr5.2:71786505-71786524 | None:intergenic | 20.0% |
| !! | GAAAAAATAATTCCTATTGT+AGG | - | chr5.2:71788113-71788132 | None:intergenic | 20.0% |
| !! | TAAGTCAATTTGTCAATAAT+TGG | + | chr5.2:71787556-71787575 | MS.gene98878:intron | 20.0% |
| !! | TGAATAAATAAACCATTGTA+GGG | + | chr5.2:71786911-71786930 | MS.gene98878:intron | 20.0% |
| !! | TTGAATAAATAAACCATTGT+AGG | + | chr5.2:71786910-71786929 | MS.gene98878:intron | 20.0% |
| !!! | AATTTGCTTATATTTAAGAC+CGG | + | chr5.2:71787725-71787744 | MS.gene98878:intron | 20.0% |
| !!! | AGCTAAATTTGCTTATATTT+AGG | - | chr5.2:71787623-71787642 | None:intergenic | 20.0% |
| !!! | ATAAGCAAATTTAGCTTTTT+AGG | + | chr5.2:71787627-71787646 | MS.gene98878:intron | 20.0% |
| !!! | ATAGAATGATTTTTCACTAA+CGG | + | chr5.2:71786546-71786565 | MS.gene98878:intron | 20.0% |
| !!! | CTTTATTCTCTAAAATGTAT+AGG | - | chr5.2:71787203-71787222 | None:intergenic | 20.0% |
| !!! | TCTTATTTATAAGACACATT+TGG | - | chr5.2:71786506-71786525 | None:intergenic | 20.0% |
| !!! | TGATTATTATGATGCATTTT+TGG | - | chr5.2:71787138-71787157 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTCATTGATTGAT+CGG | + | chr5.2:71788235-71788254 | MS.gene98878:intron | 20.0% |
| !!! | TTTTAGTTCTTGTATCAATT+GGG | + | chr5.2:71786140-71786159 | MS.gene98878:CDS | 20.0% |
| ! | AATTAATGTGATCATAGGAT+TGG | + | chr5.2:71786735-71786754 | MS.gene98878:intron | 25.0% |
| ! | CAATTGATACAAGAACTAAA+AGG | - | chr5.2:71786141-71786160 | None:intergenic | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr5.2:71787691-71787710 | None:intergenic | 25.0% |
| ! | GAAATTATTATTAACATGCG+TGG | + | chr5.2:71787795-71787814 | MS.gene98878:intron | 25.0% |
| ! | TAAAAATAATTCCGCTGAAA+TGG | - | chr5.2:71788207-71788226 | None:intergenic | 25.0% |
| ! | TCTCTTATAAATAAGATCGA+AGG | - | chr5.2:71786415-71786434 | None:intergenic | 25.0% |
| ! | TTAATAATAATTTCCACCCA+TGG | - | chr5.2:71787789-71787808 | None:intergenic | 25.0% |
| ! | TTTAAAGAATGTCCTACAAT+AGG | + | chr5.2:71788098-71788117 | MS.gene98878:intron | 25.0% |
| !! | AATTTGCTTATATTTAGGAC+CGG | - | chr5.2:71787618-71787637 | None:intergenic | 25.0% |
| !! | TTTTAAATGATACTTGGACT+AGG | + | chr5.2:71788330-71788349 | MS.gene98878:intron | 25.0% |
| !!! | CTTTTAGTTCTTGTATCAAT+TGG | + | chr5.2:71786139-71786158 | MS.gene98878:CDS | 25.0% |
| !!! | TAGTTTTTCATTGATTGATC+GGG | + | chr5.2:71788236-71788255 | MS.gene98878:intron | 25.0% |
| !!! | TTATTATGATGCATTTTTGG+TGG | - | chr5.2:71787135-71787154 | None:intergenic | 25.0% |
| AAAAGCAAGTAACATCAAAG+AGG | - | chr5.2:71786707-71786726 | None:intergenic | 30.0% | |
| AAACAATGAAACATAAAGGG+TGG | - | chr5.2:71788292-71788311 | None:intergenic | 30.0% | |
| AATTGAATGTAAGTAAGGGA+GGG | - | chr5.2:71786333-71786352 | None:intergenic | 30.0% | |
| ACCCTTTATGTTTCATTGTT+TGG | + | chr5.2:71788291-71788310 | MS.gene98878:intron | 30.0% | |
| ATCTTTCGAAAGATTAGCAT+TGG | - | chr5.2:71786170-71786189 | None:intergenic | 30.0% | |
| CATTCAACTAATGATGTATG+TGG | + | chr5.2:71787652-71787671 | MS.gene98878:intron | 30.0% | |
| CCCAAACAATGAAACATAAA+GGG | - | chr5.2:71788295-71788314 | None:intergenic | 30.0% | |
| CCCTTTATGTTTCATTGTTT+GGG | + | chr5.2:71788292-71788311 | MS.gene98878:intron | 30.0% | |
| CCTTTATGTTTCATTGTTTG+GGG | + | chr5.2:71788293-71788312 | MS.gene98878:intron | 30.0% | |
| CTATGAACTATACGATTCAT+TGG | + | chr5.2:71786877-71786896 | MS.gene98878:intron | 30.0% | |
| CTTGAAATAGTGATTGTCAA+AGG | - | chr5.2:71788520-71788539 | None:intergenic | 30.0% | |
| GATGTATGTGGTTCATATTA+TGG | + | chr5.2:71787664-71787683 | MS.gene98878:intron | 30.0% | |
| TAAACAAAAGTCGATGTATG+TGG | + | chr5.2:71786443-71786462 | MS.gene98878:intron | 30.0% | |
| TAATTGAATGTAAGTAAGGG+AGG | - | chr5.2:71786334-71786353 | None:intergenic | 30.0% | |
| TCATCCTAATTAAACTAGCA+TGG | - | chr5.2:71786675-71786694 | None:intergenic | 30.0% | |
| TTTACACTGATCGTTCAATT+AGG | - | chr5.2:71787248-71787267 | None:intergenic | 30.0% | |
| ! | ATGATTTTTCACTAACGGTT+TGG | + | chr5.2:71786551-71786570 | MS.gene98878:intron | 30.0% |
| ! | TATGCCATGCTAGTTTAATT+AGG | + | chr5.2:71786668-71786687 | MS.gene98878:intron | 30.0% |
| ! | TTCACAGTGTCAAATAGTTT+TGG | - | chr5.2:71786211-71786230 | None:intergenic | 30.0% |
| AAAACTGACTACCATTTCAG+CGG | + | chr5.2:71788193-71788212 | MS.gene98878:intron | 35.0% | |
| AAATCAGAGGAAAAAGAGCT+TGG | - | chr5.2:71788636-71788655 | None:intergenic | 35.0% | |
| AAGAACCTAGTTGACAGTAA+GGG | + | chr5.2:71788537-71788556 | MS.gene98878:CDS | 35.0% | |
| AGAGAAATTGATAGATGCCA+TGG | + | chr5.2:71787769-71787788 | MS.gene98878:intron | 35.0% | |
| AGTAAATCAGCTGCAAACAA+TGG | + | chr5.2:71787401-71787420 | MS.gene98878:CDS | 35.0% | |
| AGTTCAATCTGCCATATCAA+AGG | + | chr5.2:71786237-71786256 | MS.gene98878:CDS | 35.0% | |
| ATAGATTGATATACTCCCTC+CGG | + | chr5.2:71787596-71787615 | MS.gene98878:intron | 35.0% | |
| ATCTCAAGGTTTAATGCTCT+TGG | + | chr5.2:71787458-71787477 | MS.gene98878:CDS | 35.0% | |
| ATTGAATGTAAGTAAGGGAG+GGG | - | chr5.2:71786332-71786351 | None:intergenic | 35.0% | |
| CAAGCTATATTCATGCACTA+TGG | - | chr5.2:71788610-71788629 | None:intergenic | 35.0% | |
| CATTAAACCTTGAGATGAGT+TGG | - | chr5.2:71787454-71787473 | None:intergenic | 35.0% | |
| CCCCAAACAATGAAACATAA+AGG | - | chr5.2:71788296-71788315 | None:intergenic | 35.0% | |
| GAGAAATTGATAGATGCCAT+GGG | + | chr5.2:71787770-71787789 | MS.gene98878:intron | 35.0% | |
| GAGAGATAAGAAAGAATTGC+AGG | + | chr5.2:71788709-71788728 | MS.gene98878:CDS | 35.0% | |
| GTACATTAACAAAGCAATCG+TGG | - | chr5.2:71786300-71786319 | None:intergenic | 35.0% | |
| TATGCTTAAATTTCCCAGCT+TGG | + | chr5.2:71787329-71787348 | MS.gene98878:intron | 35.0% | |
| TCTTATCTCTCCATTTGAAC+CGG | - | chr5.2:71788700-71788719 | None:intergenic | 35.0% | |
| TGACTTATGGTTTCTTTGTC+TGG | + | chr5.2:71786639-71786658 | MS.gene98878:intron | 35.0% | |
| ! | CGCATATTTTATACTCTCTC+CGG | - | chr5.2:71787747-71787766 | None:intergenic | 35.0% |
| ! | TAAATGATACTTGGACTAGG+TGG | + | chr5.2:71788333-71788352 | MS.gene98878:intron | 35.0% |
| !! | AGCAAAGGAAGTATCTATGT+TGG | - | chr5.2:71788415-71788434 | None:intergenic | 35.0% |
| !! | AGGTTCTGGGGATAATAATT+TGG | + | chr5.2:71788467-71788486 | MS.gene98878:CDS | 35.0% |
| !!! | AATCGTCGCTTATTTTGAGA+CGG | - | chr5.2:71787839-71787858 | None:intergenic | 35.0% |
| AAACCATTGTAGGGATGTGA+TGG | + | chr5.2:71786920-71786939 | MS.gene98878:intron | 40.0% | |
| AAATTGATAGATGCCATGGG+TGG | + | chr5.2:71787773-71787792 | MS.gene98878:intron | 40.0% | |
| AATGTCTCCCATCTTGATCA+TGG | - | chr5.2:71788667-71788686 | None:intergenic | 40.0% | |
| ACCATTGAAGAGTTGTTGGT+CGG | - | chr5.2:71788574-71788593 | None:intergenic | 40.0% | |
| ATCCACCATTGAAGAGTTGT+TGG | - | chr5.2:71788578-71788597 | None:intergenic | 40.0% | |
| CAAGAACCTAGTTGACAGTA+AGG | + | chr5.2:71788536-71788555 | MS.gene98878:CDS | 40.0% | |
| CAAGTTTCACATCCCATGTT+GGG | - | chr5.2:71787358-71787377 | None:intergenic | 40.0% | |
| TAGTGATTGTCAAAGGACGT+TGG | - | chr5.2:71788513-71788532 | None:intergenic | 40.0% | |
| TGCCAATCCCAACAGAAATT+CGG | + | chr5.2:71786988-71787007 | MS.gene98878:CDS | 40.0% | |
| TGTTGGAGTCGTTGTAAATG+TGG | - | chr5.2:71788398-71788417 | None:intergenic | 40.0% | |
| TTCATGCACTATGGAATCAG+TGG | - | chr5.2:71788601-71788620 | None:intergenic | 40.0% | |
| ! | TGCTTATATTTAGGACCGGA+GGG | - | chr5.2:71787614-71787633 | None:intergenic | 40.0% |
| ! | TTGCTTATATTTAGGACCGG+AGG | - | chr5.2:71787615-71787634 | None:intergenic | 40.0% |
| AACAGAGTCTCTAGCAGTGA+TGG | - | chr5.2:71787098-71787117 | None:intergenic | 45.0% | |
| AGACAATGCGACCAAATCCT+TGG | - | chr5.2:71787492-71787511 | None:intergenic | 45.0% | |
| AGTTGGTTGAGGCTTGAAGT+GGG | - | chr5.2:71787437-71787456 | None:intergenic | 45.0% | |
| ATACTTCCTTTGCTCGCACA+AGG | + | chr5.2:71788421-71788440 | MS.gene98878:CDS | 45.0% | |
| ATATCAAAGGAGACCCGCAT+GGG | + | chr5.2:71786250-71786269 | MS.gene98878:CDS | 45.0% | |
| CCAACATGGGATGTGAAACT+TGG | + | chr5.2:71787356-71787375 | MS.gene98878:CDS | 45.0% | |
| CCAAGTTTCACATCCCATGT+TGG | - | chr5.2:71787359-71787378 | None:intergenic | 45.0% | |
| CGACAAAATCAAGTCAGCAG+TGG | + | chr5.2:71787030-71787049 | MS.gene98878:CDS | 45.0% | |
| GAACCATCACATCCCTACAA+TGG | - | chr5.2:71786926-71786945 | None:intergenic | 45.0% | |
| GACCAACAACTCTTCAATGG+TGG | + | chr5.2:71788573-71788592 | MS.gene98878:CDS | 45.0% | |
| GATGACACATCAAGCTTCAC+CGG | + | chr5.2:71786956-71786975 | MS.gene98878:CDS | 45.0% | |
| GCTTAAATTTCCCAGCTTGG+AGG | + | chr5.2:71787332-71787351 | MS.gene98878:intron | 45.0% | |
| GTAGTCCCTTACTGTCAACT+AGG | - | chr5.2:71788545-71788564 | None:intergenic | 45.0% | |
| GTCACACAATTGGACAAGCA+AGG | + | chr5.2:71788355-71788374 | MS.gene98878:CDS | 45.0% | |
| TCCGACCAACAACTCTTCAA+TGG | + | chr5.2:71788570-71788589 | MS.gene98878:CDS | 45.0% | |
| TGGACTTTCCACCAAGGATT+TGG | + | chr5.2:71787478-71787497 | MS.gene98878:CDS | 45.0% | |
| TGTCGATCACTTCGAATCCA+CGG | - | chr5.2:71787015-71787034 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGTCGCATTGTC+TGG | + | chr5.2:71787491-71787510 | MS.gene98878:CDS | 45.0% |
| !! | ACCTTGAGATGAGTTGGTTG+AGG | - | chr5.2:71787448-71787467 | None:intergenic | 45.0% |
| !! | ACGTTGGTGTTGCAAGATCA+AGG | - | chr5.2:71788497-71788516 | None:intergenic | 45.0% |
| !! | CGTTGGTGTTGCAAGATCAA+GGG | - | chr5.2:71788496-71788515 | None:intergenic | 45.0% |
| !! | GTTGGTGTTGCAAGATCAAG+GGG | - | chr5.2:71788495-71788514 | None:intergenic | 45.0% |
| !! | TAAATAATAAAAGAAAAATA+TGG | + | chr5.2:71787970-71787989 | MS.gene98878:intron | 5.0% |
| ATCCCCAGAACCTGATGTCT+TGG | - | chr5.2:71788460-71788479 | None:intergenic | 50.0% | |
| CAATGCGACCAAATCCTTGG+TGG | - | chr5.2:71787489-71787508 | None:intergenic | 50.0% | |
| CATATCAAAGGAGACCCGCA+TGG | + | chr5.2:71786249-71786268 | MS.gene98878:CDS | 50.0% | |
| CATGCGGGTCTCCTTTGATA+TGG | - | chr5.2:71786251-71786270 | None:intergenic | 50.0% | |
| CTCTCCATTTGAACCGGTGA+GGG | - | chr5.2:71788694-71788713 | None:intergenic | 50.0% | |
| GCCTCAACCAACTCATCTCA+AGG | + | chr5.2:71787444-71787463 | MS.gene98878:CDS | 50.0% | |
| GGACTAGGTGGTCACACAAT+TGG | + | chr5.2:71788345-71788364 | MS.gene98878:intron | 50.0% | |
| GGCCGAATTTCTGTTGGGAT+TGG | - | chr5.2:71786993-71787012 | None:intergenic | 50.0% | |
| GTCACCGCCATGATCAAGAT+GGG | + | chr5.2:71788657-71788676 | MS.gene98878:CDS | 50.0% | |
| GTCGATCACTTCGAATCCAC+GGG | - | chr5.2:71787014-71787033 | None:intergenic | 50.0% | |
| GTCTCCCATCTTGATCATGG+CGG | - | chr5.2:71788664-71788683 | None:intergenic | 50.0% | |
| TCCCCAGAACCTGATGTCTT+GGG | - | chr5.2:71788459-71788478 | None:intergenic | 50.0% | |
| TCTCCATTTGAACCGGTGAG+GGG | - | chr5.2:71788693-71788712 | None:intergenic | 50.0% | |
| TCTCTCCATTTGAACCGGTG+AGG | - | chr5.2:71788695-71788714 | None:intergenic | 50.0% | |
| TGAAGAGTTGTTGGTCGGAG+TGG | - | chr5.2:71788569-71788588 | None:intergenic | 50.0% | |
| TGATTGCCTTGTGCGAGCAA+AGG | - | chr5.2:71788430-71788449 | None:intergenic | 50.0% | |
| TGCTCTTGGACTTTCCACCA+AGG | + | chr5.2:71787472-71787491 | MS.gene98878:CDS | 50.0% | |
| TTGCTCGCACAAGGCAATCA+GGG | + | chr5.2:71788430-71788449 | MS.gene98878:CDS | 50.0% | |
| TTTGCTCGCACAAGGCAATC+AGG | + | chr5.2:71788429-71788448 | MS.gene98878:CDS | 50.0% | |
| ! | AGTCTCTAGCAGTGATGGTG+AGG | - | chr5.2:71787093-71787112 | None:intergenic | 50.0% |
| ! | GAGTTGGTTGAGGCTTGAAG+TGG | - | chr5.2:71787438-71787457 | None:intergenic | 50.0% |
| ! | GCAGTGGAGAAAGTATGTCC+AGG | + | chr5.2:71787046-71787065 | MS.gene98878:CDS | 50.0% |
| !! | GGGATTGGCAGTTTTCTCTC+CGG | - | chr5.2:71786978-71786997 | None:intergenic | 50.0% |
| !! | GTAGAAGAGAAGCACCCATG+CGG | - | chr5.2:71786267-71786286 | None:intergenic | 50.0% |
| !! | TAGAAGAGAAGCACCCATGC+GGG | - | chr5.2:71786266-71786285 | None:intergenic | 50.0% |
| CATGGCGGTGACGAAATCAG+AGG | - | chr5.2:71788649-71788668 | None:intergenic | 55.0% | |
| CCACGGGCCGAATTTCTGTT+GGG | - | chr5.2:71786998-71787017 | None:intergenic | 55.0% | |
| CCCCAAGACATCAGGTTCTG+GGG | + | chr5.2:71788455-71788474 | MS.gene98878:CDS | 55.0% | |
| CCCCAGAACCTGATGTCTTG+GGG | - | chr5.2:71788458-71788477 | None:intergenic | 55.0% | |
| CGTCACCGCCATGATCAAGA+TGG | + | chr5.2:71788656-71788675 | MS.gene98878:CDS | 55.0% | |
| GCCCCAAGACATCAGGTTCT+GGG | + | chr5.2:71788454-71788473 | MS.gene98878:CDS | 55.0% | |
| GGAGACATTAGTCCCCTCAC+CGG | + | chr5.2:71788678-71788697 | MS.gene98878:CDS | 55.0% | |
| TCAGCGCATGAAACTGCACC+TGG | - | chr5.2:71787067-71787086 | None:intergenic | 55.0% | |
| TCCACGGGCCGAATTTCTGT+TGG | - | chr5.2:71786999-71787018 | None:intergenic | 55.0% | |
| TGAGGCTTGAAGTGGGTGCT+GGG | - | chr5.2:71787430-71787449 | None:intergenic | 55.0% | |
| TGCCCCAAGACATCAGGTTC+TGG | + | chr5.2:71788453-71788472 | MS.gene98878:CDS | 55.0% | |
| TTGAGGCTTGAAGTGGGTGC+TGG | - | chr5.2:71787431-71787450 | None:intergenic | 55.0% | |
| !! | AGTCCCCTCACCGGTTCAAA+TGG | + | chr5.2:71788687-71788706 | MS.gene98878:CDS | 55.0% |
| CCAGCTTGGAGGCCCAACAT+GGG | + | chr5.2:71787343-71787362 | MS.gene98878:intron | 60.0% | |
| CCATGTTGGGCCTCCAAGCT+GGG | - | chr5.2:71787345-71787364 | None:intergenic | 60.0% | |
| CCCAACAGAAATTCGGCCCG+TGG | + | chr5.2:71786995-71787014 | MS.gene98878:CDS | 60.0% | |
| ! | TCAGGGTGCCCCAAGACATC+AGG | + | chr5.2:71788447-71788466 | MS.gene98878:CDS | 60.0% |
| CCCAGCTTGGAGGCCCAACA+TGG | + | chr5.2:71787342-71787361 | MS.gene98878:intron | 65.0% | |
| CCCATGTTGGGCCTCCAAGC+TGG | - | chr5.2:71787346-71787365 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 71786109 | 71788743 | 71786109 | ID=MS.gene98878 |
| chr5.2 | mRNA | 71786109 | 71788743 | 71786109 | ID=MS.gene98878.t1;Parent=MS.gene98878 |
| chr5.2 | exon | 71786109 | 71786315 | 71786109 | ID=MS.gene98878.t1.exon1;Parent=MS.gene98878.t1 |
| chr5.2 | CDS | 71786109 | 71786315 | 71786109 | ID=cds.MS.gene98878.t1;Parent=MS.gene98878.t1 |
| chr5.2 | exon | 71786932 | 71787123 | 71786932 | ID=MS.gene98878.t1.exon2;Parent=MS.gene98878.t1 |
| chr5.2 | CDS | 71786932 | 71787123 | 71786932 | ID=cds.MS.gene98878.t1;Parent=MS.gene98878.t1 |
| chr5.2 | exon | 71787347 | 71787512 | 71787347 | ID=MS.gene98878.t1.exon3;Parent=MS.gene98878.t1 |
| chr5.2 | CDS | 71787347 | 71787512 | 71787347 | ID=cds.MS.gene98878.t1;Parent=MS.gene98878.t1 |
| chr5.2 | exon | 71788352 | 71788743 | 71788352 | ID=MS.gene98878.t1.exon4;Parent=MS.gene98878.t1 |
| chr5.2 | CDS | 71788352 | 71788743 | 71788352 | ID=cds.MS.gene98878.t1;Parent=MS.gene98878.t1 |
| Gene Sequence |
| Protein sequence |
