Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26286.t1 | XP_003615995.1 | 96.8 | 308 | 10 | 0 | 1 | 308 | 19 | 326 | 1.00E-169 | 605.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26286.t1 | A7NY33 | 70.4 | 301 | 87 | 2 | 8 | 308 | 23 | 321 | 2.8e-115 | 416.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26286.t1 | G7KFM2 | 96.8 | 308 | 10 | 0 | 1 | 308 | 19 | 326 | 7.5e-170 | 605.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene26286 | MS.gene31054 | PPI |
MS.gene26286 | MS.gene31053 | PPI |
MS.gene26286 | MS.gene049372 | PPI |
MS.gene26286 | MS.gene54705 | PPI |
MS.gene26286 | MS.gene06500 | PPI |
MS.gene26286 | MS.gene06498 | PPI |
MS.gene26286 | MS.gene29725 | PPI |
MS.gene26286 | MS.gene06499 | PPI |
MS.gene26286 | MS.gene57129 | PPI |
MS.gene26286 | MS.gene013399 | PPI |
MS.gene26286 | MS.gene013400 | PPI |
MS.gene26286 | MS.gene004925 | PPI |
MS.gene26286 | MS.gene049373 | PPI |
MS.gene26286 | MS.gene31055 | PPI |
MS.gene26286 | MS.gene073297 | PPI |
MS.gene26286 | MS.gene049374 | PPI |
MS.gene26286 | MS.gene96335 | PPI |
MS.gene26286 | MS.gene062216 | PPI |
MS.gene26286 | MS.gene070268 | PPI |
MS.gene26286 | MS.gene012362 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26286.t1 | MTR_5g074970 | 96.753 | 308 | 10 | 0 | 1 | 308 | 19 | 326 | 0.0 | 614 |
MS.gene26286.t1 | MTR_3g466200 | 72.727 | 308 | 83 | 1 | 1 | 308 | 14 | 320 | 4.40e-166 | 464 |
MS.gene26286.t1 | MTR_3g094650 | 66.343 | 309 | 101 | 3 | 1 | 308 | 16 | 322 | 4.37e-146 | 414 |
MS.gene26286.t1 | MTR_5g083860 | 64.883 | 299 | 103 | 2 | 10 | 308 | 29 | 325 | 6.85e-139 | 395 |
MS.gene26286.t1 | MTR_3g094670 | 64.078 | 309 | 108 | 3 | 1 | 308 | 16 | 322 | 6.93e-135 | 385 |
MS.gene26286.t1 | MTR_4g029170 | 63.291 | 316 | 105 | 3 | 1 | 308 | 9 | 321 | 2.28e-134 | 384 |
MS.gene26286.t1 | MTR_3g094630 | 63.399 | 306 | 110 | 2 | 3 | 308 | 19 | 322 | 1.20e-130 | 374 |
MS.gene26286.t1 | MTR_4g029200 | 59.000 | 300 | 119 | 2 | 9 | 308 | 43 | 338 | 2.66e-128 | 369 |
MS.gene26286.t1 | MTR_4g029190 | 59.416 | 308 | 118 | 4 | 4 | 308 | 37 | 340 | 3.63e-127 | 366 |
MS.gene26286.t1 | MTR_4g029180 | 63.390 | 295 | 104 | 2 | 15 | 308 | 30 | 321 | 4.76e-126 | 363 |
MS.gene26286.t1 | MTR_7g072510 | 60.201 | 299 | 115 | 2 | 10 | 308 | 18 | 312 | 1.53e-125 | 361 |
MS.gene26286.t1 | MTR_3g072190 | 62.081 | 298 | 109 | 3 | 11 | 308 | 25 | 318 | 2.47e-125 | 361 |
MS.gene26286.t1 | MTR_2g084080 | 58.528 | 299 | 120 | 2 | 10 | 308 | 23 | 317 | 1.45e-123 | 356 |
MS.gene26286.t1 | MTR_4g083710 | 58.278 | 302 | 121 | 4 | 10 | 308 | 25 | 324 | 1.31e-122 | 354 |
MS.gene26286.t1 | MTR_7g072480 | 59.740 | 308 | 120 | 2 | 1 | 308 | 13 | 316 | 3.05e-122 | 353 |
MS.gene26286.t1 | MTR_2g084110 | 57.525 | 299 | 123 | 2 | 10 | 308 | 23 | 317 | 1.49e-120 | 348 |
MS.gene26286.t1 | MTR_5g074860 | 58.804 | 301 | 114 | 6 | 12 | 307 | 29 | 324 | 7.50e-119 | 345 |
MS.gene26286.t1 | MTR_4g074995 | 57.143 | 301 | 113 | 4 | 10 | 308 | 22 | 308 | 1.94e-118 | 343 |
MS.gene26286.t1 | MTR_5g074740 | 57.419 | 310 | 122 | 7 | 4 | 308 | 17 | 321 | 2.38e-118 | 343 |
MS.gene26286.t1 | MTR_3g466180 | 60.535 | 299 | 114 | 2 | 10 | 308 | 29 | 323 | 9.73e-118 | 342 |
MS.gene26286.t1 | MTR_5g074760 | 56.774 | 310 | 124 | 7 | 4 | 308 | 17 | 321 | 1.20e-117 | 342 |
MS.gene26286.t1 | MTR_2g084090 | 56.522 | 299 | 127 | 2 | 10 | 308 | 23 | 318 | 3.44e-116 | 338 |
MS.gene26286.t1 | MTR_2g084020 | 57.000 | 300 | 124 | 3 | 10 | 308 | 23 | 318 | 5.80e-116 | 337 |
MS.gene26286.t1 | MTR_5g074710 | 56.129 | 310 | 126 | 7 | 4 | 308 | 17 | 321 | 2.07e-115 | 336 |
MS.gene26286.t1 | MTR_7g026990 | 56.393 | 305 | 127 | 4 | 5 | 308 | 23 | 322 | 4.25e-115 | 335 |
MS.gene26286.t1 | MTR_3g467600 | 55.305 | 311 | 130 | 5 | 3 | 308 | 18 | 324 | 5.53e-115 | 335 |
MS.gene26286.t1 | MTR_2g084010 | 56.333 | 300 | 126 | 3 | 10 | 308 | 23 | 318 | 3.63e-114 | 332 |
MS.gene26286.t1 | MTR_1g115900 | 54.636 | 302 | 129 | 4 | 10 | 308 | 25 | 321 | 4.36e-113 | 330 |
MS.gene26286.t1 | MTR_4g074990 | 54.153 | 301 | 119 | 4 | 10 | 308 | 22 | 305 | 3.44e-111 | 325 |
MS.gene26286.t1 | MTR_2g084000 | 55.333 | 300 | 129 | 3 | 10 | 308 | 24 | 319 | 4.18e-111 | 325 |
MS.gene26286.t1 | MTR_5g021060 | 52.459 | 305 | 133 | 4 | 12 | 308 | 30 | 330 | 2.08e-104 | 308 |
MS.gene26286.t1 | MTR_3g072190 | 61.811 | 254 | 93 | 2 | 55 | 308 | 2 | 251 | 3.58e-104 | 305 |
MS.gene26286.t1 | MTR_5g017850 | 50.476 | 315 | 145 | 3 | 1 | 308 | 16 | 326 | 3.90e-103 | 305 |
MS.gene26286.t1 | MTR_5g017860 | 50.159 | 315 | 146 | 3 | 1 | 308 | 16 | 326 | 7.03e-103 | 304 |
MS.gene26286.t1 | MTR_1g054205 | 50.649 | 308 | 138 | 5 | 11 | 308 | 23 | 326 | 3.64e-102 | 302 |
MS.gene26286.t1 | MTR_8g076820 | 51.792 | 307 | 136 | 4 | 10 | 308 | 28 | 330 | 8.79e-102 | 301 |
MS.gene26286.t1 | MTR_7g093370 | 48.589 | 319 | 148 | 6 | 1 | 308 | 58 | 371 | 2.76e-100 | 299 |
MS.gene26286.t1 | MTR_2g029730 | 48.408 | 314 | 149 | 4 | 4 | 308 | 17 | 326 | 2.02e-99 | 296 |
MS.gene26286.t1 | MTR_4g125940 | 50.784 | 319 | 140 | 5 | 1 | 308 | 17 | 329 | 6.97e-99 | 294 |
MS.gene26286.t1 | MTR_1g022970 | 51.961 | 306 | 134 | 4 | 12 | 308 | 46 | 347 | 1.54e-98 | 294 |
MS.gene26286.t1 | MTR_2g029560 | 48.089 | 314 | 150 | 5 | 4 | 308 | 16 | 325 | 6.72e-98 | 292 |
MS.gene26286.t1 | MTR_2g040000 | 51.935 | 310 | 131 | 5 | 11 | 308 | 28 | 331 | 1.23e-97 | 291 |
MS.gene26286.t1 | MTR_4g122640 | 51.148 | 305 | 139 | 4 | 10 | 308 | 36 | 336 | 1.11e-96 | 289 |
MS.gene26286.t1 | MTR_5g049280 | 48.718 | 312 | 140 | 7 | 11 | 308 | 32 | 337 | 1.16e-96 | 289 |
MS.gene26286.t1 | MTR_4g074980 | 50.166 | 301 | 119 | 6 | 10 | 308 | 23 | 294 | 1.78e-96 | 286 |
MS.gene26286.t1 | MTR_2g028980 | 50.325 | 308 | 140 | 4 | 10 | 308 | 27 | 330 | 5.57e-96 | 288 |
MS.gene26286.t1 | MTR_2g029750 | 50.000 | 308 | 141 | 4 | 10 | 308 | 27 | 330 | 6.03e-94 | 282 |
MS.gene26286.t1 | MTR_2g029800 | 49.026 | 308 | 144 | 4 | 10 | 308 | 27 | 330 | 8.65e-94 | 282 |
MS.gene26286.t1 | MTR_2g029830 | 49.026 | 308 | 144 | 4 | 10 | 308 | 26 | 329 | 1.95e-93 | 281 |
MS.gene26286.t1 | MTR_2g029815 | 47.727 | 308 | 148 | 4 | 10 | 308 | 27 | 330 | 8.96e-92 | 277 |
MS.gene26286.t1 | MTR_2g029740 | 49.351 | 308 | 143 | 5 | 10 | 308 | 27 | 330 | 2.56e-91 | 276 |
MS.gene26286.t1 | MTR_5g014100 | 49.677 | 310 | 139 | 4 | 12 | 308 | 26 | 331 | 2.72e-91 | 275 |
MS.gene26286.t1 | MTR_2g029820 | 48.544 | 309 | 144 | 5 | 10 | 308 | 27 | 330 | 5.47e-91 | 275 |
MS.gene26286.t1 | MTR_4g125940 | 52.330 | 279 | 116 | 5 | 41 | 308 | 2 | 274 | 3.80e-90 | 270 |
MS.gene26286.t1 | MTR_5g074860 | 49.834 | 301 | 102 | 7 | 12 | 307 | 29 | 285 | 2.87e-89 | 268 |
MS.gene26286.t1 | MTR_4g074980 | 54.936 | 233 | 101 | 3 | 10 | 240 | 23 | 253 | 1.52e-88 | 265 |
MS.gene26286.t1 | MTR_2g029860 | 46.250 | 320 | 156 | 5 | 1 | 308 | 15 | 330 | 1.54e-88 | 268 |
MS.gene26286.t1 | MTR_2g029910 | 45.779 | 308 | 155 | 4 | 10 | 308 | 28 | 332 | 4.44e-87 | 265 |
MS.gene26286.t1 | MTR_4g030890 | 46.302 | 311 | 153 | 5 | 5 | 308 | 93 | 396 | 5.05e-87 | 267 |
MS.gene26286.t1 | MTR_4g031140 | 45.955 | 309 | 147 | 6 | 10 | 308 | 26 | 324 | 8.30e-87 | 264 |
MS.gene26286.t1 | MTR_2g029850 | 45.806 | 310 | 151 | 5 | 10 | 308 | 27 | 330 | 1.56e-85 | 261 |
MS.gene26286.t1 | MTR_1g077000 | 43.960 | 298 | 157 | 5 | 12 | 308 | 39 | 327 | 2.73e-82 | 252 |
MS.gene26286.t1 | MTR_0155s0040 | 43.667 | 300 | 159 | 5 | 10 | 308 | 25 | 315 | 9.48e-82 | 250 |
MS.gene26286.t1 | MTR_2g088770 | 44.127 | 315 | 161 | 7 | 3 | 308 | 17 | 325 | 2.29e-81 | 249 |
MS.gene26286.t1 | MTR_4g046713 | 40.823 | 316 | 174 | 5 | 1 | 308 | 16 | 326 | 1.51e-79 | 244 |
MS.gene26286.t1 | MTR_1g038680 | 43.894 | 303 | 157 | 5 | 16 | 308 | 33 | 332 | 8.69e-79 | 243 |
MS.gene26286.t1 | MTR_1g086320 | 42.949 | 312 | 165 | 5 | 7 | 308 | 25 | 333 | 1.80e-77 | 239 |
MS.gene26286.t1 | MTR_7g029030 | 44.156 | 308 | 151 | 7 | 11 | 308 | 24 | 320 | 1.21e-75 | 234 |
MS.gene26286.t1 | MTR_3g092990 | 41.587 | 315 | 174 | 3 | 1 | 308 | 15 | 326 | 1.56e-75 | 234 |
MS.gene26286.t1 | MTR_2g029830 | 48.846 | 260 | 120 | 4 | 58 | 308 | 6 | 261 | 6.63e-75 | 231 |
MS.gene26286.t1 | MTR_2g008710 | 42.763 | 304 | 154 | 6 | 16 | 308 | 31 | 325 | 3.26e-74 | 231 |
MS.gene26286.t1 | MTR_1g086490 | 41.824 | 318 | 167 | 5 | 7 | 308 | 25 | 340 | 4.16e-74 | 231 |
MS.gene26286.t1 | MTR_1g025980 | 43.046 | 302 | 156 | 6 | 10 | 304 | 22 | 314 | 7.15e-74 | 230 |
MS.gene26286.t1 | MTR_1g101830 | 40.190 | 316 | 172 | 7 | 1 | 308 | 16 | 322 | 1.18e-73 | 229 |
MS.gene26286.t1 | MTR_6g027440 | 40.645 | 310 | 177 | 4 | 1 | 308 | 10 | 314 | 4.07e-73 | 228 |
MS.gene26286.t1 | MTR_6g043280 | 43.522 | 301 | 157 | 6 | 12 | 308 | 41 | 332 | 1.06e-72 | 227 |
MS.gene26286.t1 | MTR_4g087965 | 45.246 | 305 | 153 | 6 | 11 | 304 | 41 | 342 | 2.68e-71 | 224 |
MS.gene26286.t1 | MTR_5g022870 | 40.317 | 315 | 171 | 6 | 1 | 308 | 12 | 316 | 6.28e-71 | 222 |
MS.gene26286.t1 | MTR_4g114210 | 40.836 | 311 | 163 | 6 | 10 | 308 | 19 | 320 | 1.28e-70 | 221 |
MS.gene26286.t1 | MTR_8g075100 | 40.129 | 309 | 158 | 7 | 12 | 308 | 26 | 319 | 1.86e-70 | 221 |
MS.gene26286.t1 | MTR_2g437770 | 40.328 | 305 | 161 | 6 | 12 | 308 | 50 | 341 | 2.23e-70 | 222 |
MS.gene26286.t1 | MTR_4g133800 | 40.000 | 300 | 160 | 6 | 17 | 308 | 46 | 333 | 1.12e-69 | 219 |
MS.gene26286.t1 | MTR_7g107520 | 40.132 | 304 | 167 | 6 | 12 | 308 | 25 | 320 | 1.87e-68 | 216 |
MS.gene26286.t1 | MTR_7g086820 | 38.562 | 306 | 174 | 4 | 8 | 308 | 16 | 312 | 2.43e-67 | 213 |
MS.gene26286.t1 | MTR_5g074700 | 52.863 | 227 | 87 | 8 | 85 | 308 | 5 | 214 | 7.44e-66 | 206 |
MS.gene26286.t1 | MTR_3g072210 | 58.947 | 190 | 72 | 5 | 121 | 308 | 53 | 238 | 2.27e-65 | 205 |
MS.gene26286.t1 | MTR_1g090760 | 38.065 | 310 | 180 | 5 | 8 | 308 | 24 | 330 | 5.37e-65 | 207 |
MS.gene26286.t1 | MTR_2g008160 | 40.566 | 318 | 164 | 7 | 5 | 308 | 17 | 323 | 1.30e-64 | 206 |
MS.gene26286.t1 | MTR_7g086870 | 37.919 | 298 | 176 | 4 | 12 | 308 | 22 | 311 | 3.98e-64 | 204 |
MS.gene26286.t1 | MTR_0286s0010 | 39.159 | 309 | 172 | 8 | 10 | 308 | 32 | 334 | 4.25e-64 | 205 |
MS.gene26286.t1 | MTR_6g008075 | 39.159 | 309 | 172 | 8 | 10 | 308 | 32 | 334 | 4.25e-64 | 205 |
MS.gene26286.t1 | MTR_3g092990 | 39.365 | 315 | 170 | 4 | 1 | 308 | 15 | 315 | 8.71e-64 | 204 |
MS.gene26286.t1 | MTR_8g062780 | 39.610 | 308 | 173 | 5 | 10 | 308 | 21 | 324 | 1.72e-63 | 204 |
MS.gene26286.t1 | MTR_2g077990 | 39.039 | 333 | 165 | 9 | 10 | 306 | 74 | 404 | 5.90e-63 | 204 |
MS.gene26286.t1 | MTR_5g016010 | 38.291 | 316 | 177 | 7 | 1 | 304 | 16 | 325 | 1.32e-62 | 201 |
MS.gene26286.t1 | MTR_6g043460 | 38.851 | 296 | 171 | 5 | 12 | 304 | 36 | 324 | 1.68e-62 | 202 |
MS.gene26286.t1 | MTR_2g067440 | 37.048 | 332 | 172 | 7 | 10 | 307 | 58 | 386 | 2.78e-62 | 202 |
MS.gene26286.t1 | MTR_2g078610 | 38.138 | 333 | 168 | 8 | 10 | 306 | 74 | 404 | 3.79e-62 | 202 |
MS.gene26286.t1 | MTR_4g095450 | 41.639 | 305 | 163 | 9 | 8 | 304 | 23 | 320 | 4.27e-62 | 200 |
MS.gene26286.t1 | MTR_4g127670 | 41.479 | 311 | 159 | 10 | 11 | 308 | 23 | 323 | 1.68e-61 | 198 |
MS.gene26286.t1 | MTR_5g033470 | 36.156 | 307 | 186 | 4 | 11 | 308 | 72 | 377 | 1.43e-60 | 197 |
MS.gene26286.t1 | MTR_6g043240 | 38.667 | 300 | 171 | 6 | 12 | 308 | 42 | 331 | 1.69e-60 | 196 |
MS.gene26286.t1 | MTR_3g105790 | 36.570 | 309 | 177 | 5 | 10 | 308 | 23 | 322 | 9.00e-59 | 191 |
MS.gene26286.t1 | MTR_4g132110 | 34.936 | 312 | 197 | 4 | 1 | 308 | 19 | 328 | 1.19e-58 | 191 |
MS.gene26286.t1 | MTR_1g009750 | 37.217 | 309 | 179 | 5 | 10 | 308 | 25 | 328 | 1.93e-58 | 191 |
MS.gene26286.t1 | MTR_2g099175 | 36.482 | 307 | 180 | 5 | 11 | 308 | 35 | 335 | 3.69e-58 | 190 |
MS.gene26286.t1 | MTR_2g078280 | 38.629 | 321 | 159 | 9 | 10 | 294 | 74 | 392 | 4.89e-58 | 191 |
MS.gene26286.t1 | MTR_4g132490 | 35.526 | 304 | 186 | 4 | 11 | 308 | 28 | 327 | 6.00e-58 | 189 |
MS.gene26286.t1 | MTR_1g066380 | 35.430 | 302 | 191 | 3 | 9 | 308 | 24 | 323 | 2.20e-57 | 187 |
MS.gene26286.t1 | MTR_2g008730 | 43.496 | 246 | 122 | 5 | 74 | 308 | 62 | 301 | 2.30e-57 | 187 |
MS.gene26286.t1 | MTR_1g066640 | 36.545 | 301 | 187 | 3 | 10 | 308 | 25 | 323 | 2.53e-57 | 187 |
MS.gene26286.t1 | MTR_1g066680 | 35.548 | 301 | 189 | 4 | 10 | 308 | 25 | 322 | 7.84e-57 | 186 |
MS.gene26286.t1 | MTR_4g132110 | 34.385 | 317 | 197 | 5 | 1 | 308 | 19 | 333 | 2.41e-56 | 186 |
MS.gene26286.t1 | MTR_7g072490 | 44.672 | 244 | 77 | 2 | 58 | 301 | 2 | 187 | 3.04e-56 | 181 |
MS.gene26286.t1 | MTR_1g066710 | 35.548 | 301 | 190 | 3 | 10 | 308 | 25 | 323 | 5.32e-56 | 184 |
MS.gene26286.t1 | MTR_0147s0010 | 34.062 | 320 | 172 | 6 | 12 | 307 | 77 | 381 | 6.88e-55 | 183 |
MS.gene26286.t1 | MTR_2g008160 | 38.141 | 312 | 145 | 7 | 5 | 308 | 17 | 288 | 6.48e-54 | 177 |
MS.gene26286.t1 | MTR_2g067450 | 36.570 | 309 | 177 | 8 | 10 | 307 | 9 | 309 | 1.31e-52 | 175 |
MS.gene26286.t1 | MTR_1g009750 | 34.528 | 307 | 173 | 6 | 10 | 308 | 25 | 311 | 3.52e-48 | 163 |
MS.gene26286.t1 | MTR_1g066380 | 35.686 | 255 | 160 | 3 | 56 | 308 | 3 | 255 | 2.24e-47 | 160 |
MS.gene26286.t1 | MTR_2g008160 | 46.067 | 178 | 91 | 3 | 5 | 182 | 17 | 189 | 1.52e-45 | 153 |
MS.gene26286.t1 | MTR_3g072260 | 62.162 | 111 | 42 | 0 | 11 | 121 | 25 | 135 | 1.39e-41 | 141 |
MS.gene26286.t1 | MTR_3g105790 | 37.500 | 240 | 135 | 4 | 79 | 308 | 12 | 246 | 1.64e-41 | 144 |
MS.gene26286.t1 | MTR_2g029880 | 39.175 | 194 | 95 | 4 | 124 | 308 | 9 | 188 | 9.56e-37 | 131 |
MS.gene26286.t1 | MTR_2g077980 | 31.636 | 275 | 143 | 9 | 74 | 306 | 11 | 282 | 1.04e-27 | 109 |
MS.gene26286.t1 | MTR_5g074770 | 53.191 | 94 | 41 | 2 | 216 | 307 | 16 | 108 | 3.01e-26 | 100 |
MS.gene26286.t1 | MTR_5g058120 | 34.615 | 156 | 95 | 2 | 149 | 304 | 7 | 155 | 1.70e-24 | 99.8 |
MS.gene26286.t1 | MTR_4g114220 | 58.025 | 81 | 24 | 2 | 39 | 119 | 30 | 100 | 1.35e-23 | 94.4 |
MS.gene26286.t1 | MTR_2g078560 | 31.839 | 223 | 116 | 7 | 117 | 304 | 95 | 316 | 3.12e-23 | 97.8 |
MS.gene26286.t1 | MTR_6g048160 | 64.286 | 70 | 21 | 2 | 51 | 120 | 22 | 87 | 1.19e-22 | 90.5 |
MS.gene26286.t1 | MTR_3g462850 | 38.356 | 146 | 71 | 6 | 177 | 308 | 9 | 149 | 3.56e-21 | 88.2 |
MS.gene26286.t1 | MTR_4g031040 | 35.882 | 170 | 68 | 5 | 73 | 242 | 3 | 131 | 8.95e-21 | 86.7 |
MS.gene26286.t1 | MTR_7g086790 | 40.496 | 121 | 67 | 3 | 59 | 179 | 17 | 132 | 1.99e-20 | 87.4 |
MS.gene26286.t1 | MTR_1g089005 | 41.176 | 119 | 63 | 2 | 12 | 124 | 15 | 132 | 1.38e-19 | 84.0 |
MS.gene26286.t1 | MTR_1g098320 | 35.455 | 110 | 71 | 0 | 199 | 308 | 15 | 124 | 2.40e-17 | 77.8 |
MS.gene26286.t1 | MTR_2g029930 | 35.870 | 92 | 34 | 2 | 10 | 90 | 17 | 94 | 5.26e-13 | 64.7 |
MS.gene26286.t1 | MTR_0147s0040 | 36.986 | 73 | 46 | 0 | 234 | 306 | 9 | 81 | 2.82e-12 | 62.0 |
MS.gene26286.t1 | MTR_3g086710 | 50.000 | 64 | 25 | 1 | 1 | 57 | 1 | 64 | 9.15e-12 | 60.8 |
MS.gene26286.t1 | MTR_4g012865 | 39.706 | 68 | 41 | 0 | 12 | 79 | 77 | 144 | 5.37e-11 | 60.5 |
MS.gene26286.t1 | MTR_7g086810 | 29.661 | 118 | 57 | 1 | 8 | 125 | 2 | 93 | 5.95e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26286.t1 | AT5G05340 | 65.552 | 299 | 101 | 2 | 10 | 308 | 28 | 324 | 2.95e-141 | 402 |
MS.gene26286.t1 | AT5G58390 | 66.234 | 308 | 103 | 1 | 1 | 308 | 10 | 316 | 1.14e-140 | 400 |
MS.gene26286.t1 | AT5G58400 | 63.226 | 310 | 111 | 2 | 1 | 308 | 17 | 325 | 8.27e-139 | 395 |
MS.gene26286.t1 | AT1G14550 | 55.814 | 301 | 128 | 3 | 10 | 308 | 24 | 321 | 2.46e-116 | 338 |
MS.gene26286.t1 | AT4G36430 | 51.274 | 314 | 140 | 5 | 4 | 308 | 21 | 330 | 7.34e-105 | 309 |
MS.gene26286.t1 | AT1G14540 | 52.475 | 303 | 138 | 4 | 8 | 308 | 17 | 315 | 9.29e-105 | 308 |
MS.gene26286.t1 | AT5G06720 | 50.968 | 310 | 139 | 4 | 8 | 308 | 28 | 333 | 2.54e-104 | 308 |
MS.gene26286.t1 | AT5G66390 | 50.645 | 310 | 141 | 4 | 7 | 308 | 28 | 333 | 4.78e-104 | 307 |
MS.gene26286.t1 | AT3G50990 | 51.456 | 309 | 138 | 5 | 8 | 308 | 37 | 341 | 6.66e-103 | 305 |
MS.gene26286.t1 | AT5G06730 | 48.726 | 314 | 148 | 4 | 4 | 308 | 25 | 334 | 2.10e-102 | 304 |
MS.gene26286.t1 | AT2G18150 | 51.495 | 301 | 134 | 4 | 16 | 308 | 40 | 336 | 5.79e-101 | 300 |
MS.gene26286.t1 | AT1G44970 | 50.955 | 314 | 140 | 5 | 5 | 308 | 37 | 346 | 8.36e-101 | 300 |
MS.gene26286.t1 | AT2G18140 | 49.669 | 302 | 140 | 4 | 15 | 308 | 38 | 335 | 9.67e-96 | 286 |
MS.gene26286.t1 | AT1G49570 | 50.163 | 307 | 141 | 3 | 7 | 304 | 43 | 346 | 1.13e-94 | 284 |
MS.gene26286.t1 | AT4G16270 | 50.987 | 304 | 129 | 7 | 16 | 308 | 54 | 348 | 4.08e-94 | 283 |
MS.gene26286.t1 | AT4G08770 | 48.254 | 315 | 142 | 6 | 8 | 308 | 20 | 327 | 1.16e-93 | 281 |
MS.gene26286.t1 | AT5G19890 | 48.589 | 319 | 143 | 6 | 1 | 308 | 19 | 327 | 1.71e-93 | 280 |
MS.gene26286.t1 | AT1G68850 | 46.104 | 308 | 153 | 5 | 12 | 308 | 30 | 335 | 1.01e-92 | 279 |
MS.gene26286.t1 | AT4G08780 | 47.302 | 315 | 145 | 6 | 8 | 308 | 20 | 327 | 3.80e-92 | 278 |
MS.gene26286.t1 | AT2G38390 | 47.419 | 310 | 147 | 6 | 10 | 308 | 29 | 333 | 6.23e-92 | 277 |
MS.gene26286.t1 | AT5G19880 | 47.910 | 311 | 146 | 5 | 10 | 308 | 23 | 329 | 9.63e-92 | 276 |
MS.gene26286.t1 | AT2G35380 | 48.418 | 316 | 145 | 5 | 7 | 308 | 24 | 335 | 6.92e-90 | 271 |
MS.gene26286.t1 | AT3G49110 | 47.205 | 322 | 147 | 7 | 3 | 308 | 22 | 336 | 7.28e-90 | 272 |
MS.gene26286.t1 | AT2G38380 | 47.097 | 310 | 148 | 6 | 10 | 308 | 29 | 333 | 8.73e-90 | 271 |
MS.gene26286.t1 | AT3G32980 | 46.178 | 314 | 150 | 6 | 8 | 308 | 27 | 334 | 1.46e-89 | 271 |
MS.gene26286.t1 | AT3G49120 | 46.178 | 314 | 150 | 6 | 8 | 308 | 28 | 335 | 5.92e-88 | 267 |
MS.gene26286.t1 | AT2G22420 | 44.408 | 304 | 155 | 4 | 12 | 308 | 23 | 319 | 9.87e-81 | 248 |
MS.gene26286.t1 | AT3G01190 | 43.137 | 306 | 155 | 8 | 12 | 308 | 26 | 321 | 7.45e-80 | 245 |
MS.gene26286.t1 | AT1G05260 | 44.337 | 309 | 155 | 8 | 10 | 308 | 24 | 325 | 3.33e-79 | 244 |
MS.gene26286.t1 | AT1G71695 | 43.854 | 301 | 160 | 4 | 12 | 308 | 44 | 339 | 9.70e-79 | 244 |
MS.gene26286.t1 | AT4G33420 | 43.960 | 298 | 157 | 5 | 12 | 308 | 37 | 325 | 2.48e-78 | 241 |
MS.gene26286.t1 | AT4G33420 | 43.960 | 298 | 157 | 5 | 12 | 308 | 84 | 372 | 1.22e-77 | 241 |
MS.gene26286.t1 | AT4G11290 | 40.764 | 314 | 173 | 5 | 4 | 308 | 17 | 326 | 2.11e-77 | 239 |
MS.gene26286.t1 | AT3G03670 | 40.506 | 316 | 174 | 5 | 1 | 308 | 12 | 321 | 6.04e-77 | 238 |
MS.gene26286.t1 | AT5G51890 | 40.705 | 312 | 171 | 6 | 4 | 308 | 18 | 322 | 3.76e-76 | 236 |
MS.gene26286.t1 | AT5G17820 | 39.365 | 315 | 170 | 5 | 1 | 308 | 13 | 313 | 1.74e-74 | 231 |
MS.gene26286.t1 | AT5G64120 | 40.453 | 309 | 167 | 6 | 7 | 308 | 30 | 328 | 1.87e-74 | 232 |
MS.gene26286.t1 | AT5G17820 | 40.317 | 315 | 167 | 6 | 1 | 308 | 66 | 366 | 1.99e-73 | 230 |
MS.gene26286.t1 | AT5G15180 | 41.503 | 306 | 162 | 8 | 12 | 308 | 32 | 329 | 2.72e-73 | 229 |
MS.gene26286.t1 | AT3G21770 | 40.895 | 313 | 170 | 7 | 4 | 307 | 21 | 327 | 4.15e-73 | 228 |
MS.gene26286.t1 | AT5G40150 | 39.739 | 307 | 169 | 6 | 10 | 308 | 30 | 328 | 1.58e-71 | 224 |
MS.gene26286.t1 | AT5G14130 | 40.190 | 316 | 175 | 5 | 1 | 308 | 21 | 330 | 6.18e-71 | 223 |
MS.gene26286.t1 | AT5G42180 | 40.575 | 313 | 170 | 7 | 1 | 306 | 12 | 315 | 7.97e-71 | 222 |
MS.gene26286.t1 | AT1G05240 | 39.423 | 312 | 171 | 7 | 8 | 308 | 21 | 325 | 9.36e-71 | 222 |
MS.gene26286.t1 | AT1G05250 | 39.423 | 312 | 171 | 7 | 8 | 308 | 21 | 325 | 9.36e-71 | 222 |
MS.gene26286.t1 | AT1G30870 | 42.671 | 307 | 154 | 6 | 12 | 308 | 51 | 345 | 1.34e-70 | 223 |
MS.gene26286.t1 | AT5G14130 | 40.190 | 316 | 175 | 5 | 1 | 308 | 62 | 371 | 1.76e-70 | 223 |
MS.gene26286.t1 | AT4G26010 | 39.803 | 304 | 172 | 5 | 3 | 305 | 13 | 306 | 3.31e-70 | 220 |
MS.gene26286.t1 | AT2G41480 | 39.806 | 309 | 165 | 6 | 12 | 308 | 29 | 328 | 4.25e-70 | 221 |
MS.gene26286.t1 | AT4G26010 | 39.803 | 304 | 172 | 5 | 3 | 305 | 41 | 334 | 5.00e-70 | 221 |
MS.gene26286.t1 | AT3G28200 | 38.889 | 306 | 172 | 6 | 10 | 308 | 19 | 316 | 6.58e-70 | 219 |
MS.gene26286.t1 | AT5G47000 | 41.290 | 310 | 173 | 5 | 4 | 308 | 25 | 330 | 2.08e-69 | 219 |
MS.gene26286.t1 | AT2G35380 | 48.790 | 248 | 110 | 4 | 74 | 308 | 4 | 247 | 3.16e-68 | 213 |
MS.gene26286.t1 | AT2G24800 | 39.550 | 311 | 166 | 5 | 10 | 308 | 29 | 329 | 5.96e-68 | 215 |
MS.gene26286.t1 | AT5G39580 | 41.860 | 301 | 157 | 7 | 16 | 308 | 29 | 319 | 5.88e-67 | 212 |
MS.gene26286.t1 | AT4G17690 | 41.196 | 301 | 169 | 5 | 12 | 308 | 26 | 322 | 8.20e-67 | 212 |
MS.gene26286.t1 | AT4G33870 | 34.421 | 337 | 180 | 5 | 10 | 307 | 66 | 400 | 1.46e-66 | 214 |
MS.gene26286.t1 | AT5G67400 | 40.836 | 311 | 166 | 7 | 6 | 304 | 21 | 325 | 2.52e-66 | 211 |
MS.gene26286.t1 | AT4G37530 | 41.905 | 315 | 159 | 9 | 5 | 304 | 20 | 325 | 2.06e-65 | 209 |
MS.gene26286.t1 | AT1G77100 | 40.260 | 308 | 169 | 9 | 8 | 308 | 20 | 319 | 8.51e-65 | 207 |
MS.gene26286.t1 | AT2G18980 | 39.564 | 321 | 170 | 8 | 1 | 308 | 14 | 323 | 1.81e-63 | 203 |
MS.gene26286.t1 | AT4G31760 | 37.061 | 313 | 174 | 5 | 8 | 308 | 25 | 326 | 2.01e-63 | 203 |
MS.gene26286.t1 | AT1G34510 | 38.188 | 309 | 176 | 6 | 3 | 308 | 13 | 309 | 2.31e-63 | 202 |
MS.gene26286.t1 | AT5G64100 | 39.604 | 303 | 161 | 6 | 16 | 308 | 41 | 331 | 3.23e-63 | 203 |
MS.gene26286.t1 | AT5G64110 | 39.692 | 325 | 168 | 7 | 2 | 308 | 16 | 330 | 6.90e-63 | 202 |
MS.gene26286.t1 | AT4G37520 | 41.368 | 307 | 162 | 8 | 10 | 304 | 25 | 325 | 1.42e-62 | 201 |
MS.gene26286.t1 | AT4G25980 | 37.695 | 321 | 176 | 8 | 1 | 308 | 17 | 326 | 1.43e-62 | 201 |
MS.gene26286.t1 | AT1G24110 | 38.111 | 307 | 178 | 5 | 10 | 308 | 20 | 322 | 6.44e-62 | 199 |
MS.gene26286.t1 | AT3G49960 | 39.550 | 311 | 170 | 7 | 6 | 304 | 21 | 325 | 2.03e-61 | 198 |
MS.gene26286.t1 | AT4G30170 | 40.514 | 311 | 163 | 8 | 10 | 308 | 25 | 325 | 2.21e-61 | 198 |
MS.gene26286.t1 | AT4G37520 | 40.196 | 306 | 164 | 7 | 10 | 304 | 25 | 322 | 4.66e-61 | 197 |
MS.gene26286.t1 | AT2G34060 | 39.739 | 307 | 169 | 7 | 11 | 305 | 41 | 343 | 4.09e-60 | 196 |
MS.gene26286.t1 | AT2G39040 | 38.511 | 309 | 176 | 7 | 11 | 308 | 45 | 350 | 2.54e-56 | 186 |
MS.gene26286.t1 | AT4G21960 | 36.455 | 299 | 186 | 3 | 12 | 308 | 31 | 327 | 5.42e-56 | 184 |
MS.gene26286.t1 | AT5G22410 | 37.942 | 311 | 170 | 9 | 7 | 305 | 23 | 322 | 1.23e-55 | 183 |
MS.gene26286.t1 | AT4G37530 | 42.910 | 268 | 129 | 9 | 5 | 257 | 20 | 278 | 2.80e-55 | 181 |
MS.gene26286.t1 | AT5G24070 | 38.235 | 272 | 152 | 5 | 46 | 308 | 71 | 335 | 1.18e-53 | 179 |
MS.gene26286.t1 | AT2G37130 | 34.967 | 306 | 184 | 7 | 11 | 308 | 29 | 327 | 1.23e-53 | 178 |
MS.gene26286.t1 | AT2G37130 | 35.099 | 302 | 181 | 7 | 15 | 308 | 2 | 296 | 2.04e-53 | 177 |
MS.gene26286.t1 | AT2G43480 | 33.654 | 312 | 189 | 5 | 8 | 308 | 31 | 335 | 2.40e-50 | 170 |
MS.gene26286.t1 | AT3G17070 | 32.450 | 302 | 199 | 2 | 12 | 308 | 38 | 339 | 2.88e-48 | 164 |
MS.gene26286.t1 | AT2G24800 | 46.154 | 169 | 86 | 2 | 10 | 178 | 29 | 192 | 1.35e-42 | 147 |
MS.gene26286.t1 | AT5G39580 | 42.424 | 198 | 104 | 4 | 16 | 213 | 29 | 216 | 4.15e-41 | 143 |
MS.gene26286.t1 | AT4G25980 | 41.618 | 173 | 96 | 3 | 8 | 180 | 67 | 234 | 4.38e-40 | 142 |
MS.gene26286.t1 | AT3G17070 | 29.562 | 274 | 187 | 3 | 40 | 308 | 4 | 276 | 2.79e-35 | 129 |
MS.gene26286.t1 | AT4G32320 | 30.038 | 263 | 109 | 7 | 46 | 290 | 117 | 322 | 5.87e-19 | 86.3 |
MS.gene26286.t1 | AT1G77490 | 27.863 | 262 | 142 | 10 | 46 | 289 | 106 | 338 | 3.95e-13 | 69.7 |
MS.gene26286.t1 | AT1G77490 | 27.863 | 262 | 142 | 10 | 46 | 289 | 106 | 338 | 4.15e-13 | 69.7 |
MS.gene26286.t1 | AT3G42570 | 29.661 | 118 | 81 | 1 | 65 | 180 | 32 | 149 | 3.09e-12 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACTCCACCTTAGACTTTA+TGG | 0.139781 | 5.4:+59357482 | None:intergenic |
TTATCCAGGTTTCCTTTAAT+TGG | 0.201465 | 5.4:+59354508 | None:intergenic |
TGCATTCTTCTCTCCTTTAT+TGG | 0.219837 | 5.4:+59357548 | None:intergenic |
CAAGAATCTCATCAACAAAA+AGG | 0.247712 | 5.4:-59354708 | MS.gene26286:CDS |
CCAAGTTTAACCTTCCAAAA+AGG | 0.308795 | 5.4:+59355711 | None:intergenic |
TGTAGTATAAGTTATCAAAA+TGG | 0.316765 | 5.4:+59354729 | None:intergenic |
AAGGACATGGTGGCCTTATC+TGG | 0.324620 | 5.4:-59355573 | MS.gene26286:intron |
GGAAATAACAAGCCTCTTAC+CGG | 0.340680 | 5.4:-59354566 | MS.gene26286:CDS |
AATGCAGGAGAGCCAATTAA+AGG | 0.372028 | 5.4:-59354520 | None:intergenic |
CCCTTAGCAACCTTATCAAT+AGG | 0.386741 | 5.4:-59355620 | MS.gene26286:CDS |
GATCAAAAGGGGAGATTAGA+AGG | 0.387743 | 5.4:-59354544 | MS.gene26286:CDS |
TGCTACTGCAATGATTAAGA+TGG | 0.388563 | 5.4:-59354588 | MS.gene26286:CDS |
TGGAGGATCTACTGATTCAT+TGG | 0.391305 | 5.4:-59354654 | MS.gene26286:CDS |
AAGGTTGCTAAGGGTGGAAA+AGG | 0.395412 | 5.4:+59355629 | None:intergenic |
GAGCTTTAAACCTATTGATA+AGG | 0.399870 | 5.4:+59355610 | None:intergenic |
GATGACACACCCTCCAATAA+AGG | 0.400602 | 5.4:-59357561 | MS.gene26286:CDS |
TATTGATGCCATAAAGTCTA+AGG | 0.403057 | 5.4:-59357490 | MS.gene26286:CDS |
GTTGTTCACTCTGCTGTCGC+TGG | 0.408991 | 5.4:-59359369 | MS.gene26286:CDS |
ACCTATTGATAAGGTTGCTA+AGG | 0.414625 | 5.4:+59355619 | None:intergenic |
AAGCCTCTTACCGGATCAAA+AGG | 0.417845 | 5.4:-59354557 | MS.gene26286:CDS |
TTCTTCTCTCCTTTATTGGA+GGG | 0.419465 | 5.4:+59357552 | None:intergenic |
ACCTCTCAAAGAATCTTTGT+TGG | 0.427591 | 5.4:+59357521 | None:intergenic |
CCTCTCAAAGAATCTTTGTT+GGG | 0.433102 | 5.4:+59357522 | None:intergenic |
TTCTTAGGAGCTCACACAAT+TGG | 0.437641 | 5.4:-59354902 | MS.gene26286:intron |
GGAAGGTTAAACTTGGAAGA+AGG | 0.441433 | 5.4:-59355704 | MS.gene26286:CDS |
ATTCTTCTCTCCTTTATTGG+AGG | 0.454303 | 5.4:+59357551 | None:intergenic |
GAAGGTTAAACTTGGAAGAA+GGG | 0.455829 | 5.4:-59355703 | MS.gene26286:CDS |
GTAAATACGATCTCTATAAA+CGG | 0.464729 | 5.4:+59354865 | None:intergenic |
TATAAGTTATCAAAATGGTT+TGG | 0.466239 | 5.4:+59354734 | None:intergenic |
ATCAATAGGTTTAAAGCTCA+AGG | 0.476560 | 5.4:-59355606 | MS.gene26286:CDS |
ACAATTCCTCTGCCTTGACT+TGG | 0.477817 | 5.4:+59354814 | None:intergenic |
ACTGTTTGCATCATTGAGGC+TGG | 0.487052 | 5.4:+59355668 | None:intergenic |
GCTACTGCAATGATTAAGAT+GGG | 0.493974 | 5.4:-59354587 | MS.gene26286:CDS |
GGGAGATTAGAAGGCAATGC+AGG | 0.503265 | 5.4:-59354535 | MS.gene26286:CDS |
CCCAACAAAGATTCTTTGAG+AGG | 0.507682 | 5.4:-59357522 | MS.gene26286:CDS |
CTAAGGGTGGAAAAGGGAGG+TGG | 0.512202 | 5.4:+59355636 | None:intergenic |
TGTCGCTGGAGAACCTCGCA+TGG | 0.519585 | 5.4:-59359355 | MS.gene26286:CDS |
AGCCTCTTACCGGATCAAAA+GGG | 0.519613 | 5.4:-59354556 | MS.gene26286:CDS |
TATTGATAACAGGGCTGTGA+TGG | 0.525762 | 5.4:-59357597 | MS.gene26286:intron |
CACCACTGTTTGCATCATTG+AGG | 0.529112 | 5.4:+59355664 | None:intergenic |
CAAAGCAGTCATGAAAATGA+AGG | 0.532001 | 5.4:+59359316 | None:intergenic |
TCAGCACAAGAGACCACACC+GGG | 0.536369 | 5.4:+59357453 | None:intergenic |
AGCTCAAGGACTCTCTACTA+AGG | 0.542515 | 5.4:-59355592 | MS.gene26286:CDS |
AGGTTGCTAAGGGTGGAAAA+GGG | 0.542574 | 5.4:+59355630 | None:intergenic |
CCTATTGATAAGGTTGCTAA+GGG | 0.552353 | 5.4:+59355620 | None:intergenic |
AACAGAATCACGAGCAGCAA+TGG | 0.556484 | 5.4:+59357422 | None:intergenic |
AAAGCTCTTGATCAGAATGA+AGG | 0.559330 | 5.4:+59354681 | None:intergenic |
GTCGCTGGAGAACCTCGCAT+GGG | 0.562961 | 5.4:-59359354 | MS.gene26286:CDS |
ATAGTTTATTTGCCAAGTCA+AGG | 0.563167 | 5.4:-59354826 | MS.gene26286:CDS |
AGGAATTGTCCAAGGAAAAG+TGG | 0.565194 | 5.4:-59354800 | MS.gene26286:CDS |
TTGCTAAGGGTGGAAAAGGG+AGG | 0.567320 | 5.4:+59355633 | None:intergenic |
ATTGATAAGGTTGCTAAGGG+TGG | 0.575681 | 5.4:+59355623 | None:intergenic |
TATTTGCCAAGTCAAGGCAG+AGG | 0.591700 | 5.4:-59354820 | MS.gene26286:CDS |
GCTGGAGAACCTCGCATGGG+AGG | 0.607286 | 5.4:-59359351 | MS.gene26286:CDS |
CAAGGCAGAGGAATTGTCCA+AGG | 0.617740 | 5.4:-59354808 | MS.gene26286:CDS |
GCCTCTTACCGGATCAAAAG+GGG | 0.621930 | 5.4:-59354555 | MS.gene26286:CDS |
TGATGCCATAAAGTCTAAGG+TGG | 0.622773 | 5.4:-59357487 | MS.gene26286:CDS |
AGGAGCTCACACAATTGGAA+AGG | 0.625854 | 5.4:-59354897 | MS.gene26286:CDS |
CTCACACAATTGGAAAGGCA+AGG | 0.636642 | 5.4:-59354892 | MS.gene26286:CDS |
AAGGTGGAGTCACTATGCCC+CGG | 0.645504 | 5.4:-59357471 | MS.gene26286:CDS |
AGAAGAGATCCTCCCATGCG+AGG | 0.655274 | 5.4:+59359342 | None:intergenic |
GGAGTCACTATGCCCCGGTG+TGG | 0.658587 | 5.4:-59357466 | MS.gene26286:CDS |
AGGACTCTCTACTAAGGACA+TGG | 0.666154 | 5.4:-59355586 | MS.gene26286:CDS |
ATCAGCACAAGAGACCACAC+CGG | 0.684464 | 5.4:+59357452 | None:intergenic |
AGCCTCAATGATGCAAACAG+TGG | 0.715380 | 5.4:-59355666 | MS.gene26286:CDS |
ACTCTCTACTAAGGACATGG+TGG | 0.722310 | 5.4:-59355583 | MS.gene26286:CDS |
AGCGACAGCAGAGTGAACAA+CGG | 0.724102 | 5.4:+59359371 | None:intergenic |
CAGCACAAGAGACCACACCG+GGG | 0.839989 | 5.4:+59357454 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAATAAAAAAAAATATTG+AGG | - | chr5.4:59357709-59357728 | MS.gene26286:intron | 10.0% |
!! | TAATCTTTATCTAATAAATT+TGG | - | chr5.4:59355834-59355853 | MS.gene26286:intron | 10.0% |
!!! | ACATATTTTTATTTTATTTG+GGG | - | chr5.4:59357534-59357553 | MS.gene26286:CDS | 10.0% |
!!! | AGATTGAATATATTATTTTT+TGG | - | chr5.4:59355377-59355396 | MS.gene26286:intron | 10.0% |
!!! | CACATATTTTTATTTTATTT+GGG | - | chr5.4:59357533-59357552 | MS.gene26286:CDS | 10.0% |
!!! | TCACATATTTTTATTTTATT+TGG | - | chr5.4:59357532-59357551 | MS.gene26286:CDS | 10.0% |
!! | AAATAAATTATTTGTACGTA+CGG | + | chr5.4:59355947-59355966 | None:intergenic | 15.0% |
!! | AAGAAAATACATGAAATTAT+TGG | - | chr5.4:59358660-59358679 | MS.gene26286:intron | 15.0% |
!! | ATTAATTCATAAATATGTGT+TGG | + | chr5.4:59357118-59357137 | None:intergenic | 15.0% |
!! | TATTAGAAGAAAAGAAATTA+GGG | + | chr5.4:59358176-59358195 | None:intergenic | 15.0% |
!! | TGTTGAAAATGAAATTTAAA+CGG | + | chr5.4:59358731-59358750 | None:intergenic | 15.0% |
!! | TTATTAGAAGAAAAGAAATT+AGG | + | chr5.4:59358177-59358196 | None:intergenic | 15.0% |
!!! | AATAATTTCATGTATTTTCT+TGG | + | chr5.4:59358661-59358680 | None:intergenic | 15.0% |
!!! | CTAATATATTTTGAATAAGA+GGG | - | chr5.4:59357812-59357831 | MS.gene26286:intron | 15.0% |
!!! | GAATTAATTTTTTTAAATGG+TGG | + | chr5.4:59357393-59357412 | None:intergenic | 15.0% |
!!! | GTATAAATTTTACTTTTCAA+AGG | + | chr5.4:59357253-59357272 | None:intergenic | 15.0% |
!!! | TAATATATTTTGAATAAGAG+GGG | - | chr5.4:59357813-59357832 | MS.gene26286:intron | 15.0% |
!!! | TCTAATATATTTTGAATAAG+AGG | - | chr5.4:59357811-59357830 | MS.gene26286:intron | 15.0% |
!!! | TGATCTATAATTTGTAAAAT+GGG | - | chr5.4:59356703-59356722 | MS.gene26286:intron | 15.0% |
!!! | TTGTTTCGTATTTTATAATA+GGG | - | chr5.4:59357557-59357576 | MS.gene26286:CDS | 15.0% |
!!! | TTTTATTGAAGAGATTTTAA+TGG | - | chr5.4:59356951-59356970 | MS.gene26286:intron | 15.0% |
!!! | TTTTTTTTTTCTTTTGCAAA+AGG | - | chr5.4:59354984-59355003 | MS.gene26286:intron | 15.0% |
!! | AAAATTCATAGAACAAAAGA+CGG | - | chr5.4:59355033-59355052 | MS.gene26286:intron | 20.0% |
!! | AATATAATGTTTACAAGTCT+TGG | - | chr5.4:59356784-59356803 | MS.gene26286:intron | 20.0% |
!! | AGCGCATATTTAATTATTAA+GGG | + | chr5.4:59357313-59357332 | None:intergenic | 20.0% |
!! | ATATTTAATTATTAAGGGAG+AGG | + | chr5.4:59357308-59357327 | None:intergenic | 20.0% |
!! | CTTAGAACAAAACAAAAATT+AGG | + | chr5.4:59358589-59358608 | None:intergenic | 20.0% |
!! | GTAATTTAAGCATCATATAA+GGG | + | chr5.4:59357282-59357301 | None:intergenic | 20.0% |
!! | GTGGATATATAATATAGAAA+TGG | + | chr5.4:59354915-59354934 | None:intergenic | 20.0% |
!! | TAGCGCATATTTAATTATTA+AGG | + | chr5.4:59357314-59357333 | None:intergenic | 20.0% |
!! | TATAAGTTATCAAAATGGTT+TGG | + | chr5.4:59359251-59359270 | None:intergenic | 20.0% |
!! | TATTTAATTATTAAGGGAGA+GGG | + | chr5.4:59357307-59357326 | None:intergenic | 20.0% |
!! | TGTAATTTAAGCATCATATA+AGG | + | chr5.4:59357283-59357302 | None:intergenic | 20.0% |
!! | TGTAGTATAAGTTATCAAAA+TGG | + | chr5.4:59359256-59359275 | None:intergenic | 20.0% |
!! | TTACTAAATACAATAAAGCA+TGG | + | chr5.4:59357508-59357527 | None:intergenic | 20.0% |
!! | TTCGATATTAAAGAGAAAAT+GGG | - | chr5.4:59358900-59358919 | MS.gene26286:intron | 20.0% |
!! | TTTCGAAAAAAATAGTATTG+CGG | + | chr5.4:59357656-59357675 | None:intergenic | 20.0% |
!!! | AAATTTTACTTTTCAAAGGA+GGG | + | chr5.4:59357249-59357268 | None:intergenic | 20.0% |
!!! | AACAATACTTTTTTTTAGAG+GGG | - | chr5.4:59355914-59355933 | MS.gene26286:intron | 20.0% |
!!! | AAGTTTTAATTAGACACAAT+AGG | + | chr5.4:59358448-59358467 | None:intergenic | 20.0% |
!!! | ACAACAATACTTTTTTTTAG+AGG | - | chr5.4:59355912-59355931 | MS.gene26286:intron | 20.0% |
!!! | ACTTCATAAACATATGATTT+TGG | - | chr5.4:59356331-59356350 | MS.gene26286:intron | 20.0% |
!!! | AGTATAGATTTTAACATAAG+AGG | - | chr5.4:59357738-59357757 | MS.gene26286:intron | 20.0% |
!!! | AGTGTATATTTTAACATAAG+AGG | - | chr5.4:59357841-59357860 | MS.gene26286:intron | 20.0% |
!!! | AGTGTATATTTTAAGATAAG+AGG | + | chr5.4:59357225-59357244 | None:intergenic | 20.0% |
!!! | ATTTCTTCCTCAATAAATTT+TGG | - | chr5.4:59355217-59355236 | MS.gene26286:intron | 20.0% |
!!! | ATTTTCTCTTTAATATCGAA+GGG | + | chr5.4:59358900-59358919 | None:intergenic | 20.0% |
!!! | CAACAATACTTTTTTTTAGA+GGG | - | chr5.4:59355913-59355932 | MS.gene26286:intron | 20.0% |
!!! | CATATGTTTATGAAGTTTTA+GGG | + | chr5.4:59356327-59356346 | None:intergenic | 20.0% |
!!! | CTGATCTATAATTTGTAAAA+TGG | - | chr5.4:59356702-59356721 | MS.gene26286:intron | 20.0% |
!!! | GTATAGATTTTAACATAAGA+GGG | - | chr5.4:59357739-59357758 | MS.gene26286:intron | 20.0% |
!!! | GTGTATATTTTAACATAAGA+GGG | - | chr5.4:59357842-59357861 | MS.gene26286:intron | 20.0% |
!!! | GTGTATATTTTAAGATAAGA+GGG | + | chr5.4:59357224-59357243 | None:intergenic | 20.0% |
!!! | GTTGTTTCGTATTTTATAAT+AGG | - | chr5.4:59357556-59357575 | MS.gene26286:CDS | 20.0% |
!!! | TAAATTTTACTTTTCAAAGG+AGG | + | chr5.4:59357250-59357269 | None:intergenic | 20.0% |
!!! | TAGATTTTCTTCTTAGTTTT+GGG | + | chr5.4:59355093-59355112 | None:intergenic | 20.0% |
!!! | TATAGATTTTAACATAAGAG+GGG | - | chr5.4:59357740-59357759 | MS.gene26286:intron | 20.0% |
!!! | TCATATGTTTATGAAGTTTT+AGG | + | chr5.4:59356328-59356347 | None:intergenic | 20.0% |
!!! | TGAAAGTTTTTTAGTAGTAA+TGG | - | chr5.4:59355886-59355905 | MS.gene26286:intron | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | - | chr5.4:59357843-59357862 | MS.gene26286:intron | 20.0% |
!!! | TGTATATTTTAAGATAAGAG+GGG | + | chr5.4:59357223-59357242 | None:intergenic | 20.0% |
!!! | TTAGATTTTCTTCTTAGTTT+TGG | + | chr5.4:59355094-59355113 | None:intergenic | 20.0% |
! | AAGAATCTCATCAACAAAAA+GGG | - | chr5.4:59359275-59359294 | MS.gene26286:intron | 25.0% |
! | AAGCTAGATCTAATGAATAA+AGG | - | chr5.4:59355143-59355162 | MS.gene26286:intron | 25.0% |
! | ATTTACAGCCTTAAAAACAT+TGG | + | chr5.4:59354590-59354609 | None:intergenic | 25.0% |
! | CATCATCATTAAATTTGTGA+CGG | + | chr5.4:59354833-59354852 | None:intergenic | 25.0% |
! | CTTATTGAGTGAATTGAATA+GGG | - | chr5.4:59355434-59355453 | MS.gene26286:intron | 25.0% |
! | CTTCGATATTAAAGAGAAAA+TGG | - | chr5.4:59358899-59358918 | MS.gene26286:intron | 25.0% |
! | GAAATCTTCATATGAACTAT+TGG | + | chr5.4:59355324-59355343 | None:intergenic | 25.0% |
! | GTAAATACGATCTCTATAAA+CGG | + | chr5.4:59359120-59359139 | None:intergenic | 25.0% |
! | GTAATTCAAACATCTTTGAA+GGG | - | chr5.4:59357874-59357893 | MS.gene26286:intron | 25.0% |
! | TCTTATTGAGTGAATTGAAT+AGG | - | chr5.4:59355433-59355452 | MS.gene26286:intron | 25.0% |
! | TGTAATTCAAACATCTTTGA+AGG | - | chr5.4:59357873-59357892 | MS.gene26286:intron | 25.0% |
! | TTAAAAAAGTCACTTAGAGT+TGG | + | chr5.4:59357086-59357105 | None:intergenic | 25.0% |
! | TTAAACATCAAGCTTCAAAA+AGG | + | chr5.4:59356044-59356063 | None:intergenic | 25.0% |
! | TTAGTATTTGATCATTGCAA+TGG | + | chr5.4:59354759-59354778 | None:intergenic | 25.0% |
! | TTCAAAGAATCTATTTCGTT+TGG | - | chr5.4:59357936-59357955 | MS.gene26286:intron | 25.0% |
! | TTCGAAAAAAATAGTATTGC+GGG | + | chr5.4:59357655-59357674 | None:intergenic | 25.0% |
! | TTTAATTCTTTGTGCTTCTT+AGG | - | chr5.4:59359065-59359084 | MS.gene26286:intron | 25.0% |
! | TTTACAGCCTTAAAAACATT+GGG | + | chr5.4:59354589-59354608 | None:intergenic | 25.0% |
!! | AATATGTGCATATAACTTGT+TGG | + | chr5.4:59356924-59356943 | None:intergenic | 25.0% |
!! | AATGCTATGTAAGTTGAATT+TGG | + | chr5.4:59358857-59358876 | None:intergenic | 25.0% |
!! | AGTTTTTGCTGATAATTTTC+TGG | + | chr5.4:59356812-59356831 | None:intergenic | 25.0% |
!! | CATTTTCTCTTTAATATCGA+AGG | + | chr5.4:59358901-59358920 | None:intergenic | 25.0% |
!! | CTGAAGTGATTAATGAATTT+TGG | + | chr5.4:59359037-59359056 | None:intergenic | 25.0% |
!! | GTCTTTTGTTCTATGAATTT+TGG | + | chr5.4:59355034-59355053 | None:intergenic | 25.0% |
!!! | AATTTTACTTTTCAAAGGAG+GGG | + | chr5.4:59357248-59357267 | None:intergenic | 25.0% |
!!! | ACTTTTTGCTTATTGATAAC+AGG | - | chr5.4:59356375-59356394 | MS.gene26286:intron | 25.0% |
!!! | CTTTTTGCTTATTGATAACA+GGG | - | chr5.4:59356376-59356395 | MS.gene26286:intron | 25.0% |
!!! | TTTTTTCTTTTGCAAAAGGA+TGG | - | chr5.4:59354988-59355007 | MS.gene26286:intron | 25.0% |
AAAAAGACATGTACCAGATA+AGG | + | chr5.4:59358425-59358444 | None:intergenic | 30.0% | |
AAAAGACGGAAAGATACAAA+GGG | - | chr5.4:59355047-59355066 | MS.gene26286:intron | 30.0% | |
AAAATTAGACATGCCAAATG+TGG | + | chr5.4:59356214-59356233 | None:intergenic | 30.0% | |
ACAACATGGGAAAATTACAA+GGG | + | chr5.4:59355785-59355804 | None:intergenic | 30.0% | |
ATAGTTTATTTGCCAAGTCA+AGG | - | chr5.4:59359156-59359175 | MS.gene26286:intron | 30.0% | |
ATATATTCACCAACCTATGT+TGG | + | chr5.4:59355656-59355675 | None:intergenic | 30.0% | |
ATGTAATTCAAGCTTCTCTT+AGG | - | chr5.4:59357769-59357788 | MS.gene26286:intron | 30.0% | |
ATTAGCGCCAAAATTTATTG+AGG | + | chr5.4:59355227-59355246 | None:intergenic | 30.0% | |
ATTTAAGCATCATATAAGGG+AGG | + | chr5.4:59357279-59357298 | None:intergenic | 30.0% | |
CAAGAATCTCATCAACAAAA+AGG | - | chr5.4:59359274-59359293 | MS.gene26286:intron | 30.0% | |
GAGTATTTAACTCACAACAT+GGG | + | chr5.4:59355798-59355817 | None:intergenic | 30.0% | |
GTTGGAACAAAACGAAAATT+AGG | + | chr5.4:59357068-59357087 | None:intergenic | 30.0% | |
TATATTCACCAACCTATGTT+GGG | + | chr5.4:59355655-59355674 | None:intergenic | 30.0% | |
TATTGATGCCATAAAGTCTA+AGG | - | chr5.4:59356492-59356511 | MS.gene26286:intron | 30.0% | |
TGACGTAACTATTGCAATAA+TGG | - | chr5.4:59355546-59355565 | MS.gene26286:intron | 30.0% | |
TGCATTGTGAATAAAGCAAA+AGG | - | chr5.4:59356003-59356022 | MS.gene26286:intron | 30.0% | |
TGGTGAAAAAAAAGAGAAGT+TGG | - | chr5.4:59357997-59358016 | MS.gene26286:intron | 30.0% | |
TGTAATTCAAGCATCTTTGA+GGG | + | chr5.4:59357193-59357212 | None:intergenic | 30.0% | |
TGTAATTCAAGCTTCTCTTA+GGG | - | chr5.4:59357770-59357789 | MS.gene26286:intron | 30.0% | |
TTACCATTTCATTTCAACTG+TGG | + | chr5.4:59358706-59358725 | None:intergenic | 30.0% | |
TTCACAAATTCAACCACATT+TGG | - | chr5.4:59356198-59356217 | MS.gene26286:intron | 30.0% | |
TTTAAGCATCATATAAGGGA+GGG | + | chr5.4:59357278-59357297 | None:intergenic | 30.0% | |
TTTAGATTATCAAACCACCA+AGG | + | chr5.4:59358927-59358946 | None:intergenic | 30.0% | |
TTTCCACAGTTGAAATGAAA+TGG | - | chr5.4:59358700-59358719 | MS.gene26286:intron | 30.0% | |
! | AGAGTATTTAACTCACAACA+TGG | + | chr5.4:59355799-59355818 | None:intergenic | 30.0% |
! | AGCTTCTTTAGAGATAAAGA+AGG | + | chr5.4:59355128-59355147 | None:intergenic | 30.0% |
! | ATCAATAGGTTTAAAGCTCA+AGG | - | chr5.4:59358376-59358395 | MS.gene26286:intron | 30.0% |
! | GGGTTTAAAACTACATGTTA+TGG | - | chr5.4:59357577-59357596 | MS.gene26286:CDS | 30.0% |
! | TTCTATCATATTTTGCAGCT+TGG | - | chr5.4:59358244-59358263 | MS.gene26286:intron | 30.0% |
!! | ATATTTTGAATAAGAGGGGA+GGG | - | chr5.4:59357817-59357836 | MS.gene26286:intron | 30.0% |
!! | GAGCTTTAAACCTATTGATA+AGG | + | chr5.4:59358375-59358394 | None:intergenic | 30.0% |
!! | GGCATGTCTAATTTTTGTTT+TGG | - | chr5.4:59356219-59356238 | MS.gene26286:intron | 30.0% |
!! | GTTTTCTTTCTCTATTTCTC+TGG | + | chr5.4:59354791-59354810 | None:intergenic | 30.0% |
!! | TATATTTTGAATAAGAGGGG+AGG | - | chr5.4:59357816-59357835 | MS.gene26286:intron | 30.0% |
!! | TGTTCTATGAATTTTGGTGA+TGG | + | chr5.4:59355028-59355047 | None:intergenic | 30.0% |
!! | TTTATTGTACCACTTTTCCT+TGG | + | chr5.4:59359194-59359213 | None:intergenic | 30.0% |
!!! | AAGCTTCAAAAAGGCATTTT+TGG | + | chr5.4:59356035-59356054 | None:intergenic | 30.0% |
!!! | ATATTTTAACATAAGAGGGG+AGG | - | chr5.4:59357846-59357865 | MS.gene26286:intron | 30.0% |
!!! | TATTTTAACATAAGAGGGGA+GGG | - | chr5.4:59357847-59357866 | MS.gene26286:intron | 30.0% |
!!! | TTTCTCACTAGTTTTCTAAG+TGG | + | chr5.4:59354937-59354956 | None:intergenic | 30.0% |
AAAGACGGAAAGATACAAAG+GGG | - | chr5.4:59355048-59355067 | MS.gene26286:intron | 35.0% | |
AAAGCTCTTGATCAGAATGA+AGG | + | chr5.4:59359304-59359323 | None:intergenic | 35.0% | |
ACCTATTGATAAGGTTGCTA+AGG | + | chr5.4:59358366-59358385 | None:intergenic | 35.0% | |
ACCTCTCAAAGAATCTTTGT+TGG | + | chr5.4:59356464-59356483 | None:intergenic | 35.0% | |
ACGCATGTCTAACTAATATG+CGG | + | chr5.4:59356139-59356158 | None:intergenic | 35.0% | |
AGGGCAATGATAGGTATATA+AGG | + | chr5.4:59356308-59356327 | None:intergenic | 35.0% | |
ATATTCACCAACCTATGTTG+GGG | + | chr5.4:59355654-59355673 | None:intergenic | 35.0% | |
ATCATCACACTAATTAGTGC+TGG | + | chr5.4:59355178-59355197 | None:intergenic | 35.0% | |
ATTCTTCTCTCCTTTATTGG+AGG | + | chr5.4:59356434-59356453 | None:intergenic | 35.0% | |
CAAAAGACGGAAAGATACAA+AGG | - | chr5.4:59355046-59355065 | MS.gene26286:intron | 35.0% | |
CAAAGCAGTCATGAAAATGA+AGG | + | chr5.4:59354669-59354688 | None:intergenic | 35.0% | |
CACAACATGGGAAAATTACA+AGG | + | chr5.4:59355786-59355805 | None:intergenic | 35.0% | |
CCAAGTTTAACCTTCCAAAA+AGG | + | chr5.4:59358274-59358293 | None:intergenic | 35.0% | |
CCTATTGATAAGGTTGCTAA+GGG | + | chr5.4:59358365-59358384 | None:intergenic | 35.0% | |
CCTCTCAAAGAATCTTTGTT+GGG | + | chr5.4:59356463-59356482 | None:intergenic | 35.0% | |
GAAGGTTAAACTTGGAAGAA+GGG | - | chr5.4:59358279-59358298 | MS.gene26286:intron | 35.0% | |
GAATCTATTTCGTTTGGCAA+TGG | - | chr5.4:59357942-59357961 | MS.gene26286:intron | 35.0% | |
GCTACTGCAATGATTAAGAT+GGG | - | chr5.4:59359395-59359414 | MS.gene26286:CDS | 35.0% | |
GTAATTCAAGCATCTTTGAG+GGG | + | chr5.4:59357192-59357211 | None:intergenic | 35.0% | |
GTAATTCAAGCTTCTCTTAG+GGG | - | chr5.4:59357771-59357790 | MS.gene26286:intron | 35.0% | |
GTGTAATTCAAGCATCTTTG+AGG | + | chr5.4:59357194-59357213 | None:intergenic | 35.0% | |
TATCACACATTTGGTTGACT+AGG | - | chr5.4:59358525-59358544 | MS.gene26286:intron | 35.0% | |
TGCATTCTTCTCTCCTTTAT+TGG | + | chr5.4:59356437-59356456 | None:intergenic | 35.0% | |
TGCTACTGCAATGATTAAGA+TGG | - | chr5.4:59359394-59359413 | MS.gene26286:CDS | 35.0% | |
TTAAAGAGAAAATGGGACCT+TGG | - | chr5.4:59358907-59358926 | MS.gene26286:intron | 35.0% | |
TTAAGCATCATATAAGGGAG+GGG | + | chr5.4:59357277-59357296 | None:intergenic | 35.0% | |
TTCTTCTCTCCTTTATTGGA+GGG | + | chr5.4:59356433-59356452 | None:intergenic | 35.0% | |
! | ATAGACTTTTCAACGAGTCA+TGG | - | chr5.4:59357974-59357993 | MS.gene26286:intron | 35.0% |
! | ATCATATTTTGCAGCTTGGA+GGG | - | chr5.4:59358248-59358267 | MS.gene26286:intron | 35.0% |
! | ATTCAAACATCTTTGAAGGG+AGG | - | chr5.4:59357877-59357896 | MS.gene26286:intron | 35.0% |
! | TATCATATTTTGCAGCTTGG+AGG | - | chr5.4:59358247-59358266 | MS.gene26286:intron | 35.0% |
! | TCTGATCAAGAGCTTTTCAA+TGG | - | chr5.4:59359308-59359327 | MS.gene26286:intron | 35.0% |
!! | AGATTTTAACATAAGAGGGG+AGG | - | chr5.4:59357743-59357762 | MS.gene26286:intron | 35.0% |
!! | ATTTTAACATAAGAGGGGAG+GGG | - | chr5.4:59357745-59357764 | MS.gene26286:intron | 35.0% |
!! | CCTTTTTGGAAGGTTAAACT+TGG | - | chr5.4:59358271-59358290 | MS.gene26286:intron | 35.0% |
!! | GAAGTGTCCCAATGTTTTTA+AGG | - | chr5.4:59354579-59354598 | MS.gene26286:CDS | 35.0% |
!! | TATTTTGAATAAGAGGGGAG+GGG | - | chr5.4:59357818-59357837 | MS.gene26286:intron | 35.0% |
!!! | CTTCTTAGTTTTGGGAGTTT+TGG | + | chr5.4:59355085-59355104 | None:intergenic | 35.0% |
!!! | TGAAGTTTTAGGGCAATGAT+AGG | + | chr5.4:59356317-59356336 | None:intergenic | 35.0% |
AAATCGCTCTCAAAGATGAG+TGG | + | chr5.4:59355624-59355643 | None:intergenic | 40.0% | |
AGGAATTGTCCAAGGAAAAG+TGG | - | chr5.4:59359182-59359201 | MS.gene26286:intron | 40.0% | |
ATGTAGAGAGACTGTAGACT+AGG | - | chr5.4:59356861-59356880 | MS.gene26286:intron | 40.0% | |
ATTGATAAGGTTGCTAAGGG+TGG | + | chr5.4:59358362-59358381 | None:intergenic | 40.0% | |
ATTTACCATGTCCCCAACAT+AGG | - | chr5.4:59355640-59355659 | MS.gene26286:CDS | 40.0% | |
CCCAACAAAGATTCTTTGAG+AGG | - | chr5.4:59356460-59356479 | MS.gene26286:intron | 40.0% | |
CCCTTAGCAACCTTATCAAT+AGG | - | chr5.4:59358362-59358381 | MS.gene26286:intron | 40.0% | |
GATCAAAAGGGGAGATTAGA+AGG | - | chr5.4:59359438-59359457 | MS.gene26286:CDS | 40.0% | |
GGAAATAACAAGCCTCTTAC+CGG | - | chr5.4:59359416-59359435 | MS.gene26286:CDS | 40.0% | |
GGAAGGTTAAACTTGGAAGA+AGG | - | chr5.4:59358278-59358297 | MS.gene26286:intron | 40.0% | |
TGACTCCACCTTAGACTTTA+TGG | + | chr5.4:59356503-59356522 | None:intergenic | 40.0% | |
TGATGCCATAAAGTCTAAGG+TGG | - | chr5.4:59356495-59356514 | MS.gene26286:intron | 40.0% | |
TTCTTAGGAGCTCACACAAT+TGG | - | chr5.4:59359080-59359099 | MS.gene26286:intron | 40.0% | |
! | GATCAAGAGCTTTTCAATGG+AGG | - | chr5.4:59359311-59359330 | MS.gene26286:CDS | 40.0% |
! | TATTGATAACAGGGCTGTGA+TGG | - | chr5.4:59356385-59356404 | MS.gene26286:intron | 40.0% |
! | TCTAATCTCCCCTTTTGATC+CGG | + | chr5.4:59359438-59359457 | None:intergenic | 40.0% |
! | TTTTCATGTCGTTACGCTAC+TGG | - | chr5.4:59355467-59355486 | MS.gene26286:intron | 40.0% |
!! | TGGAGGATCTACTGATTCAT+TGG | - | chr5.4:59359328-59359347 | MS.gene26286:CDS | 40.0% |
!!! | CTCACTAGTTTTCTAAGTGG+TGG | + | chr5.4:59354934-59354953 | None:intergenic | 40.0% |
!!! | GGTTTGGTGTTTTGAAGTCT+AGG | + | chr5.4:59359235-59359254 | None:intergenic | 40.0% |
AACAGAATCACGAGCAGCAA+TGG | + | chr5.4:59356563-59356582 | None:intergenic | 45.0% | |
AAGAGAAAATGGGACCTTGG+TGG | - | chr5.4:59358910-59358929 | MS.gene26286:intron | 45.0% | |
AAGCCTCTTACCGGATCAAA+AGG | - | chr5.4:59359425-59359444 | MS.gene26286:CDS | 45.0% | |
AAGGTTGCTAAGGGTGGAAA+AGG | + | chr5.4:59358356-59358375 | None:intergenic | 45.0% | |
ACAATTCCTCTGCCTTGACT+TGG | + | chr5.4:59359171-59359190 | None:intergenic | 45.0% | |
ACGGAAAGATACAAAGGGGA+GGG | - | chr5.4:59355052-59355071 | MS.gene26286:intron | 45.0% | |
ACTCTCTACTAAGGACATGG+TGG | - | chr5.4:59358399-59358418 | MS.gene26286:intron | 45.0% | |
ACTGTTTGCATCATTGAGGC+TGG | + | chr5.4:59358317-59358336 | None:intergenic | 45.0% | |
AGAGACTGTAGACTAGGATG+TGG | - | chr5.4:59356867-59356886 | MS.gene26286:intron | 45.0% | |
AGCCTCAATGATGCAAACAG+TGG | - | chr5.4:59358316-59358335 | MS.gene26286:intron | 45.0% | |
AGCCTCTTACCGGATCAAAA+GGG | - | chr5.4:59359426-59359445 | MS.gene26286:CDS | 45.0% | |
AGCTCAAGGACTCTCTACTA+AGG | - | chr5.4:59358390-59358409 | MS.gene26286:intron | 45.0% | |
AGGACTCTCTACTAAGGACA+TGG | - | chr5.4:59358396-59358415 | MS.gene26286:intron | 45.0% | |
AGGAGCTCACACAATTGGAA+AGG | - | chr5.4:59359085-59359104 | MS.gene26286:intron | 45.0% | |
AGGTTGCTAAGGGTGGAAAA+GGG | + | chr5.4:59358355-59358374 | None:intergenic | 45.0% | |
ATTCAAGCTTCTCTTAGGGG+AGG | - | chr5.4:59357774-59357793 | MS.gene26286:intron | 45.0% | |
CACCACTGTTTGCATCATTG+AGG | + | chr5.4:59358321-59358340 | None:intergenic | 45.0% | |
CTCACACAATTGGAAAGGCA+AGG | - | chr5.4:59359090-59359109 | MS.gene26286:intron | 45.0% | |
GATGACACACCCTCCAATAA+AGG | - | chr5.4:59356421-59356440 | MS.gene26286:intron | 45.0% | |
GGCATAACATGCAATGTACG+TGG | + | chr5.4:59357047-59357066 | None:intergenic | 45.0% | |
TATTTGCCAAGTCAAGGCAG+AGG | - | chr5.4:59359162-59359181 | MS.gene26286:intron | 45.0% | |
TCTACAGTCTCTCTACATCG+AGG | + | chr5.4:59356859-59356878 | None:intergenic | 45.0% | |
TTCAAGCTTCTCTTAGGGGA+GGG | - | chr5.4:59357775-59357794 | MS.gene26286:intron | 45.0% | |
! | ATTCAAGCATCTTTGAGGGG+AGG | + | chr5.4:59357189-59357208 | None:intergenic | 45.0% |
! | CACTAATTAGTGCTGGAACG+AGG | + | chr5.4:59355171-59355190 | None:intergenic | 45.0% |
! | GACTTTTCAACGAGTCATGG+TGG | - | chr5.4:59357977-59357996 | MS.gene26286:intron | 45.0% |
! | TTCAAGCATCTTTGAGGGGA+GGG | + | chr5.4:59357188-59357207 | None:intergenic | 45.0% |
!! | GTACTCTGACTCTAGAGTCT+TGG | - | chr5.4:59358755-59358774 | MS.gene26286:intron | 45.0% |
!!! | AATGAATTAATTTTTTTAAA+TGG | + | chr5.4:59357396-59357415 | None:intergenic | 5.0% |
!!! | ACAAAAATTTAATAATTTTT+TGG | + | chr5.4:59355693-59355712 | None:intergenic | 5.0% |
ACCAACCTATGTTGGGGACA+TGG | + | chr5.4:59355648-59355667 | None:intergenic | 50.0% | |
ACCATGTCCCCAACATAGGT+TGG | - | chr5.4:59355644-59355663 | MS.gene26286:CDS | 50.0% | |
AGCGACAGCAGAGTGAACAA+CGG | + | chr5.4:59354614-59354633 | None:intergenic | 50.0% | |
ATCAGCACAAGAGACCACAC+CGG | + | chr5.4:59356533-59356552 | None:intergenic | 50.0% | |
CAAGGCAGAGGAATTGTCCA+AGG | - | chr5.4:59359174-59359193 | MS.gene26286:intron | 50.0% | |
CGGAAAGATACAAAGGGGAG+GGG | - | chr5.4:59355053-59355072 | MS.gene26286:intron | 50.0% | |
GACGGAAAGATACAAAGGGG+AGG | - | chr5.4:59355051-59355070 | MS.gene26286:intron | 50.0% | |
GCCTCTTACCGGATCAAAAG+GGG | - | chr5.4:59359427-59359446 | MS.gene26286:CDS | 50.0% | |
GGCATGACATGAAGTCTACG+TGG | + | chr5.4:59358568-59358587 | None:intergenic | 50.0% | |
GGGAGATTAGAAGGCAATGC+AGG | - | chr5.4:59359447-59359466 | MS.gene26286:CDS | 50.0% | |
TCAAGCTTCTCTTAGGGGAG+GGG | - | chr5.4:59357776-59357795 | MS.gene26286:intron | 50.0% | |
TTGCTAAGGGTGGAAAAGGG+AGG | + | chr5.4:59358352-59358371 | None:intergenic | 50.0% | |
TTTGTGAAGTCACGCGCACA+CGG | + | chr5.4:59356186-59356205 | None:intergenic | 50.0% | |
! | TCCCCTTTTGATCCGGTAAG+AGG | + | chr5.4:59359431-59359450 | None:intergenic | 50.0% |
!! | AAGGACATGGTGGCCTTATC+TGG | - | chr5.4:59358409-59358428 | MS.gene26286:intron | 50.0% |
AAGGTGGAGTCACTATGCCC+CGG | - | chr5.4:59356511-59356530 | MS.gene26286:intron | 55.0% | |
AGAAGAGATCCTCCCATGCG+AGG | + | chr5.4:59354643-59354662 | None:intergenic | 55.0% | |
CTAAGGGTGGAAAAGGGAGG+TGG | + | chr5.4:59358349-59358368 | None:intergenic | 55.0% | |
GATACAAAGGGGAGGGGACT+AGG | - | chr5.4:59355059-59355078 | MS.gene26286:intron | 55.0% | |
GTTGTTCACTCTGCTGTCGC+TGG | - | chr5.4:59354613-59354632 | MS.gene26286:CDS | 55.0% | |
TCAGCACAAGAGACCACACC+GGG | + | chr5.4:59356532-59356551 | None:intergenic | 55.0% | |
! | GCTTGGAGGGCCTTTTTGGA+AGG | - | chr5.4:59358261-59358280 | MS.gene26286:intron | 55.0% |
! | TGCAGCTTGGAGGGCCTTTT+TGG | - | chr5.4:59358257-59358276 | MS.gene26286:intron | 55.0% |
CAGCACAAGAGACCACACCG+GGG | + | chr5.4:59356531-59356550 | None:intergenic | 60.0% | |
GTCGCTGGAGAACCTCGCAT+GGG | - | chr5.4:59354628-59354647 | MS.gene26286:CDS | 60.0% | |
TGTCGCTGGAGAACCTCGCA+TGG | - | chr5.4:59354627-59354646 | MS.gene26286:CDS | 60.0% | |
GCTGGAGAACCTCGCATGGG+AGG | - | chr5.4:59354631-59354650 | MS.gene26286:CDS | 65.0% | |
GGAGTCACTATGCCCCGGTG+TGG | - | chr5.4:59356516-59356535 | MS.gene26286:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 59354523 | 59359481 | 59354523 | ID=MS.gene26286 |
chr5.4 | mRNA | 59354523 | 59359481 | 59354523 | ID=MS.gene26286.t1;Parent=MS.gene26286 |
chr5.4 | exon | 59359311 | 59359481 | 59359311 | ID=MS.gene26286.t1.exon1;Parent=MS.gene26286.t1 |
chr5.4 | CDS | 59359311 | 59359481 | 59359311 | ID=cds.MS.gene26286.t1;Parent=MS.gene26286.t1 |
chr5.4 | exon | 59357416 | 59357607 | 59357416 | ID=MS.gene26286.t1.exon2;Parent=MS.gene26286.t1 |
chr5.4 | CDS | 59357416 | 59357607 | 59357416 | ID=cds.MS.gene26286.t1;Parent=MS.gene26286.t1 |
chr5.4 | exon | 59355574 | 59355742 | 59355574 | ID=MS.gene26286.t1.exon3;Parent=MS.gene26286.t1 |
chr5.4 | CDS | 59355574 | 59355742 | 59355574 | ID=cds.MS.gene26286.t1;Parent=MS.gene26286.t1 |
chr5.4 | exon | 59354523 | 59354917 | 59354523 | ID=MS.gene26286.t1.exon4;Parent=MS.gene26286.t1 |
chr5.4 | CDS | 59354523 | 59354917 | 59354523 | ID=cds.MS.gene26286.t1;Parent=MS.gene26286.t1 |
Gene Sequence |
Protein sequence |