Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06500.t1 | XP_003602461.1 | 97.8 | 322 | 7 | 0 | 1 | 322 | 1 | 322 | 7.00E-169 | 603.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06500.t1 | Q9FLC0 | 73.6 | 318 | 80 | 1 | 9 | 322 | 7 | 324 | 2.6e-127 | 456.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06500.t1 | G7J9S0 | 97.8 | 322 | 7 | 0 | 1 | 322 | 1 | 322 | 5.1e-169 | 603.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009689 | MS.gene06500 | PPI |
| MS.gene26286 | MS.gene06500 | PPI |
| MS.gene49484 | MS.gene06500 | PPI |
| MS.gene06500 | MS.gene017208 | PPI |
| MS.gene06500 | MS.gene008562 | PPI |
| MS.gene06500 | MS.gene009691 | PPI |
| MS.gene049488 | MS.gene06500 | PPI |
| MS.gene26287 | MS.gene06500 | PPI |
| MS.gene06500 | MS.gene38511 | PPI |
| MS.gene06500 | MS.gene98878 | PPI |
| MS.gene06500 | MS.gene41565 | PPI |
| MS.gene017207 | MS.gene06500 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06500.t1 | MTR_3g094630 | 97.826 | 322 | 7 | 0 | 1 | 322 | 1 | 322 | 0.0 | 640 |
| MS.gene06500.t1 | MTR_3g094670 | 92.236 | 322 | 25 | 0 | 1 | 322 | 1 | 322 | 0.0 | 584 |
| MS.gene06500.t1 | MTR_3g094650 | 85.093 | 322 | 48 | 0 | 1 | 322 | 1 | 322 | 0.0 | 561 |
| MS.gene06500.t1 | MTR_5g083860 | 76.997 | 313 | 71 | 1 | 11 | 322 | 13 | 325 | 5.04e-178 | 495 |
| MS.gene06500.t1 | MTR_3g466200 | 67.516 | 314 | 101 | 1 | 10 | 322 | 7 | 320 | 7.50e-159 | 446 |
| MS.gene06500.t1 | MTR_2g084080 | 66.238 | 311 | 101 | 2 | 14 | 322 | 9 | 317 | 5.66e-149 | 421 |
| MS.gene06500.t1 | MTR_2g084110 | 64.423 | 312 | 109 | 1 | 11 | 322 | 8 | 317 | 1.86e-146 | 415 |
| MS.gene06500.t1 | MTR_2g084090 | 64.103 | 312 | 111 | 1 | 11 | 322 | 8 | 318 | 2.91e-145 | 412 |
| MS.gene06500.t1 | MTR_2g084020 | 64.087 | 323 | 110 | 3 | 1 | 322 | 1 | 318 | 4.18e-145 | 412 |
| MS.gene06500.t1 | MTR_2g084010 | 64.217 | 313 | 109 | 2 | 11 | 322 | 8 | 318 | 9.64e-144 | 408 |
| MS.gene06500.t1 | MTR_5g074970 | 63.344 | 311 | 111 | 3 | 14 | 322 | 17 | 326 | 3.09e-141 | 402 |
| MS.gene06500.t1 | MTR_2g084000 | 62.136 | 309 | 114 | 2 | 15 | 322 | 13 | 319 | 3.46e-139 | 397 |
| MS.gene06500.t1 | MTR_7g072510 | 58.599 | 314 | 128 | 1 | 9 | 322 | 1 | 312 | 4.63e-134 | 383 |
| MS.gene06500.t1 | MTR_4g083710 | 60.127 | 316 | 122 | 4 | 11 | 322 | 9 | 324 | 3.11e-132 | 379 |
| MS.gene06500.t1 | MTR_3g072190 | 58.438 | 320 | 125 | 2 | 9 | 322 | 1 | 318 | 1.49e-130 | 375 |
| MS.gene06500.t1 | MTR_3g466180 | 61.812 | 309 | 114 | 2 | 14 | 322 | 19 | 323 | 2.31e-129 | 372 |
| MS.gene06500.t1 | MTR_7g072480 | 55.414 | 314 | 138 | 1 | 9 | 322 | 5 | 316 | 5.39e-126 | 363 |
| MS.gene06500.t1 | MTR_5g074860 | 57.862 | 318 | 123 | 6 | 9 | 321 | 13 | 324 | 8.95e-125 | 360 |
| MS.gene06500.t1 | MTR_4g029170 | 57.372 | 312 | 128 | 4 | 13 | 322 | 13 | 321 | 1.26e-124 | 360 |
| MS.gene06500.t1 | MTR_4g074995 | 58.176 | 318 | 117 | 4 | 8 | 322 | 4 | 308 | 1.72e-123 | 356 |
| MS.gene06500.t1 | MTR_1g115900 | 56.731 | 312 | 129 | 4 | 14 | 322 | 13 | 321 | 3.49e-123 | 357 |
| MS.gene06500.t1 | MTR_5g074710 | 55.590 | 322 | 134 | 6 | 7 | 322 | 3 | 321 | 5.42e-122 | 353 |
| MS.gene06500.t1 | MTR_4g074990 | 55.556 | 315 | 122 | 4 | 11 | 322 | 6 | 305 | 1.66e-121 | 351 |
| MS.gene06500.t1 | MTR_4g029180 | 58.362 | 293 | 118 | 3 | 32 | 322 | 31 | 321 | 1.09e-120 | 350 |
| MS.gene06500.t1 | MTR_4g029200 | 52.922 | 308 | 143 | 1 | 15 | 322 | 33 | 338 | 2.57e-120 | 349 |
| MS.gene06500.t1 | MTR_5g074760 | 55.280 | 322 | 135 | 6 | 7 | 322 | 3 | 321 | 3.43e-120 | 348 |
| MS.gene06500.t1 | MTR_5g074740 | 54.969 | 322 | 136 | 6 | 7 | 322 | 3 | 321 | 2.95e-119 | 346 |
| MS.gene06500.t1 | MTR_7g026990 | 52.500 | 320 | 145 | 4 | 4 | 322 | 9 | 322 | 1.00e-116 | 340 |
| MS.gene06500.t1 | MTR_4g029190 | 52.632 | 304 | 143 | 1 | 20 | 322 | 37 | 340 | 5.88e-116 | 338 |
| MS.gene06500.t1 | MTR_7g093370 | 52.000 | 325 | 144 | 5 | 8 | 322 | 49 | 371 | 6.53e-115 | 337 |
| MS.gene06500.t1 | MTR_5g021060 | 51.815 | 303 | 136 | 3 | 28 | 322 | 30 | 330 | 2.60e-110 | 324 |
| MS.gene06500.t1 | MTR_3g467600 | 50.000 | 320 | 153 | 4 | 8 | 322 | 7 | 324 | 1.69e-109 | 322 |
| MS.gene06500.t1 | MTR_3g072190 | 61.905 | 252 | 94 | 1 | 71 | 322 | 2 | 251 | 1.07e-108 | 317 |
| MS.gene06500.t1 | MTR_1g054205 | 50.313 | 320 | 145 | 5 | 14 | 322 | 10 | 326 | 6.97e-108 | 317 |
| MS.gene06500.t1 | MTR_8g076820 | 52.475 | 303 | 134 | 3 | 28 | 322 | 30 | 330 | 5.13e-107 | 315 |
| MS.gene06500.t1 | MTR_4g074980 | 52.698 | 315 | 120 | 5 | 11 | 322 | 6 | 294 | 9.76e-107 | 313 |
| MS.gene06500.t1 | MTR_5g017850 | 48.287 | 321 | 154 | 4 | 9 | 322 | 11 | 326 | 2.75e-102 | 303 |
| MS.gene06500.t1 | MTR_4g122640 | 49.508 | 305 | 146 | 3 | 24 | 322 | 34 | 336 | 9.83e-102 | 302 |
| MS.gene06500.t1 | MTR_2g029815 | 48.193 | 332 | 157 | 4 | 4 | 322 | 1 | 330 | 1.49e-101 | 302 |
| MS.gene06500.t1 | MTR_4g074980 | 58.871 | 248 | 98 | 3 | 11 | 254 | 6 | 253 | 9.71e-101 | 296 |
| MS.gene06500.t1 | MTR_4g125940 | 48.780 | 328 | 150 | 6 | 6 | 322 | 9 | 329 | 1.08e-100 | 299 |
| MS.gene06500.t1 | MTR_2g040000 | 49.547 | 331 | 149 | 6 | 6 | 322 | 5 | 331 | 3.20e-100 | 298 |
| MS.gene06500.t1 | MTR_5g017860 | 46.875 | 320 | 161 | 3 | 10 | 322 | 9 | 326 | 4.12e-100 | 298 |
| MS.gene06500.t1 | MTR_1g022970 | 49.013 | 304 | 144 | 3 | 28 | 322 | 46 | 347 | 5.43e-100 | 298 |
| MS.gene06500.t1 | MTR_5g014100 | 49.515 | 309 | 139 | 5 | 28 | 322 | 26 | 331 | 1.58e-98 | 294 |
| MS.gene06500.t1 | MTR_2g029800 | 47.289 | 332 | 160 | 4 | 4 | 322 | 1 | 330 | 1.87e-98 | 294 |
| MS.gene06500.t1 | MTR_2g029820 | 46.386 | 332 | 163 | 4 | 4 | 322 | 1 | 330 | 1.03e-97 | 293 |
| MS.gene06500.t1 | MTR_2g029750 | 47.590 | 332 | 159 | 5 | 4 | 322 | 1 | 330 | 1.14e-96 | 290 |
| MS.gene06500.t1 | MTR_2g029860 | 48.348 | 333 | 158 | 5 | 1 | 322 | 1 | 330 | 1.30e-96 | 290 |
| MS.gene06500.t1 | MTR_2g029830 | 48.544 | 309 | 148 | 3 | 23 | 322 | 23 | 329 | 1.41e-96 | 290 |
| MS.gene06500.t1 | MTR_2g029560 | 48.693 | 306 | 146 | 4 | 26 | 322 | 22 | 325 | 5.44e-96 | 288 |
| MS.gene06500.t1 | MTR_5g074860 | 49.686 | 318 | 110 | 9 | 9 | 321 | 13 | 285 | 3.91e-95 | 283 |
| MS.gene06500.t1 | MTR_2g029740 | 46.084 | 332 | 164 | 5 | 4 | 322 | 1 | 330 | 2.60e-94 | 284 |
| MS.gene06500.t1 | MTR_2g028980 | 47.678 | 323 | 157 | 5 | 9 | 322 | 11 | 330 | 2.41e-93 | 281 |
| MS.gene06500.t1 | MTR_4g030890 | 46.278 | 309 | 154 | 4 | 21 | 322 | 93 | 396 | 4.88e-93 | 283 |
| MS.gene06500.t1 | MTR_4g031140 | 46.078 | 306 | 153 | 4 | 24 | 322 | 24 | 324 | 1.04e-92 | 279 |
| MS.gene06500.t1 | MTR_2g029730 | 46.296 | 324 | 163 | 3 | 8 | 322 | 5 | 326 | 1.86e-92 | 279 |
| MS.gene06500.t1 | MTR_5g049280 | 43.949 | 314 | 158 | 6 | 23 | 322 | 28 | 337 | 6.83e-91 | 275 |
| MS.gene06500.t1 | MTR_4g125940 | 52.708 | 277 | 116 | 5 | 57 | 322 | 2 | 274 | 8.37e-91 | 272 |
| MS.gene06500.t1 | MTR_2g029850 | 45.783 | 332 | 165 | 4 | 4 | 322 | 1 | 330 | 1.47e-90 | 274 |
| MS.gene06500.t1 | MTR_2g029910 | 44.207 | 328 | 169 | 4 | 8 | 322 | 6 | 332 | 2.28e-90 | 274 |
| MS.gene06500.t1 | MTR_0155s0040 | 41.009 | 317 | 179 | 5 | 7 | 322 | 6 | 315 | 1.15e-82 | 253 |
| MS.gene06500.t1 | MTR_1g101830 | 41.818 | 330 | 176 | 7 | 1 | 322 | 1 | 322 | 4.96e-82 | 251 |
| MS.gene06500.t1 | MTR_3g092990 | 38.838 | 327 | 191 | 3 | 4 | 322 | 1 | 326 | 2.58e-81 | 249 |
| MS.gene06500.t1 | MTR_7g029030 | 40.752 | 319 | 182 | 4 | 8 | 322 | 5 | 320 | 6.71e-81 | 248 |
| MS.gene06500.t1 | MTR_1g077000 | 39.815 | 324 | 179 | 6 | 8 | 322 | 11 | 327 | 1.01e-79 | 246 |
| MS.gene06500.t1 | MTR_2g088770 | 42.767 | 318 | 168 | 7 | 14 | 322 | 13 | 325 | 1.51e-78 | 243 |
| MS.gene06500.t1 | MTR_4g046713 | 40.000 | 315 | 178 | 4 | 12 | 318 | 11 | 322 | 2.14e-78 | 242 |
| MS.gene06500.t1 | MTR_4g114210 | 42.508 | 327 | 166 | 8 | 11 | 322 | 1 | 320 | 2.23e-78 | 242 |
| MS.gene06500.t1 | MTR_1g025980 | 41.693 | 319 | 172 | 6 | 7 | 318 | 3 | 314 | 1.59e-77 | 239 |
| MS.gene06500.t1 | MTR_5g022870 | 41.641 | 329 | 164 | 9 | 9 | 322 | 1 | 316 | 5.04e-77 | 238 |
| MS.gene06500.t1 | MTR_2g029830 | 47.674 | 258 | 124 | 3 | 74 | 322 | 6 | 261 | 4.93e-76 | 235 |
| MS.gene06500.t1 | MTR_8g075100 | 42.071 | 309 | 160 | 7 | 23 | 322 | 21 | 319 | 7.75e-76 | 235 |
| MS.gene06500.t1 | MTR_6g027440 | 37.224 | 317 | 188 | 4 | 11 | 322 | 4 | 314 | 4.25e-73 | 228 |
| MS.gene06500.t1 | MTR_2g008710 | 39.264 | 326 | 180 | 6 | 8 | 322 | 7 | 325 | 1.60e-72 | 227 |
| MS.gene06500.t1 | MTR_7g086820 | 38.255 | 298 | 180 | 3 | 26 | 322 | 18 | 312 | 5.17e-72 | 226 |
| MS.gene06500.t1 | MTR_1g009750 | 39.009 | 323 | 182 | 6 | 11 | 322 | 10 | 328 | 9.43e-72 | 225 |
| MS.gene06500.t1 | MTR_7g107520 | 39.748 | 317 | 178 | 5 | 13 | 322 | 10 | 320 | 3.20e-71 | 224 |
| MS.gene06500.t1 | MTR_1g086320 | 37.730 | 326 | 191 | 3 | 9 | 322 | 8 | 333 | 5.23e-71 | 223 |
| MS.gene06500.t1 | MTR_2g437770 | 40.594 | 303 | 161 | 7 | 28 | 322 | 50 | 341 | 1.03e-70 | 223 |
| MS.gene06500.t1 | MTR_3g092990 | 37.003 | 327 | 186 | 4 | 4 | 322 | 1 | 315 | 1.52e-70 | 222 |
| MS.gene06500.t1 | MTR_6g043280 | 41.137 | 299 | 165 | 6 | 28 | 322 | 41 | 332 | 2.17e-70 | 222 |
| MS.gene06500.t1 | MTR_5g016010 | 37.910 | 335 | 181 | 7 | 1 | 318 | 1 | 325 | 2.63e-70 | 221 |
| MS.gene06500.t1 | MTR_4g133800 | 40.066 | 302 | 163 | 6 | 29 | 322 | 42 | 333 | 3.33e-70 | 221 |
| MS.gene06500.t1 | MTR_5g074700 | 51.542 | 227 | 92 | 6 | 99 | 322 | 3 | 214 | 2.94e-69 | 215 |
| MS.gene06500.t1 | MTR_3g072210 | 58.289 | 187 | 74 | 3 | 138 | 322 | 54 | 238 | 4.29e-69 | 215 |
| MS.gene06500.t1 | MTR_1g038680 | 39.535 | 301 | 171 | 4 | 32 | 322 | 33 | 332 | 4.67e-69 | 218 |
| MS.gene06500.t1 | MTR_4g087965 | 39.934 | 303 | 170 | 5 | 27 | 318 | 41 | 342 | 4.61e-68 | 216 |
| MS.gene06500.t1 | MTR_6g043460 | 37.126 | 334 | 192 | 6 | 1 | 322 | 1 | 328 | 2.04e-67 | 215 |
| MS.gene06500.t1 | MTR_4g127670 | 38.961 | 308 | 169 | 6 | 27 | 322 | 23 | 323 | 2.44e-67 | 214 |
| MS.gene06500.t1 | MTR_1g086490 | 37.126 | 334 | 189 | 5 | 9 | 322 | 8 | 340 | 1.99e-66 | 212 |
| MS.gene06500.t1 | MTR_4g095450 | 37.695 | 321 | 182 | 6 | 9 | 318 | 7 | 320 | 5.94e-66 | 210 |
| MS.gene06500.t1 | MTR_2g077990 | 36.364 | 330 | 172 | 6 | 28 | 320 | 76 | 404 | 9.78e-65 | 209 |
| MS.gene06500.t1 | MTR_7g086870 | 35.254 | 295 | 186 | 3 | 28 | 322 | 22 | 311 | 1.01e-64 | 207 |
| MS.gene06500.t1 | MTR_2g099175 | 35.976 | 328 | 189 | 7 | 9 | 322 | 15 | 335 | 2.04e-64 | 207 |
| MS.gene06500.t1 | MTR_1g066710 | 35.548 | 301 | 188 | 4 | 26 | 322 | 25 | 323 | 3.07e-64 | 206 |
| MS.gene06500.t1 | MTR_2g067440 | 35.562 | 329 | 175 | 6 | 28 | 321 | 60 | 386 | 3.28e-64 | 207 |
| MS.gene06500.t1 | MTR_2g008160 | 38.217 | 314 | 175 | 7 | 21 | 322 | 17 | 323 | 7.82e-63 | 202 |
| MS.gene06500.t1 | MTR_1g090760 | 34.877 | 324 | 199 | 6 | 9 | 322 | 9 | 330 | 9.57e-63 | 202 |
| MS.gene06500.t1 | MTR_4g132490 | 32.602 | 319 | 209 | 2 | 9 | 322 | 10 | 327 | 1.18e-62 | 202 |
| MS.gene06500.t1 | MTR_2g078610 | 35.435 | 333 | 171 | 8 | 28 | 320 | 76 | 404 | 1.31e-62 | 204 |
| MS.gene06500.t1 | MTR_0286s0010 | 34.472 | 322 | 192 | 6 | 14 | 322 | 19 | 334 | 1.21e-61 | 199 |
| MS.gene06500.t1 | MTR_6g008075 | 34.472 | 322 | 192 | 6 | 14 | 322 | 19 | 334 | 1.21e-61 | 199 |
| MS.gene06500.t1 | MTR_1g066380 | 34.426 | 305 | 186 | 4 | 26 | 322 | 25 | 323 | 2.58e-61 | 198 |
| MS.gene06500.t1 | MTR_1g066640 | 34.426 | 305 | 186 | 4 | 26 | 322 | 25 | 323 | 1.41e-59 | 194 |
| MS.gene06500.t1 | MTR_1g009750 | 35.826 | 321 | 178 | 7 | 11 | 322 | 10 | 311 | 2.18e-59 | 193 |
| MS.gene06500.t1 | MTR_1g066680 | 33.667 | 300 | 194 | 4 | 26 | 322 | 25 | 322 | 3.83e-59 | 192 |
| MS.gene06500.t1 | MTR_7g072490 | 45.041 | 242 | 77 | 2 | 74 | 315 | 2 | 187 | 6.24e-59 | 188 |
| MS.gene06500.t1 | MTR_2g078280 | 35.535 | 318 | 167 | 6 | 28 | 308 | 76 | 392 | 8.65e-59 | 194 |
| MS.gene06500.t1 | MTR_8g062780 | 34.700 | 317 | 196 | 5 | 15 | 322 | 10 | 324 | 1.15e-58 | 192 |
| MS.gene06500.t1 | MTR_2g008730 | 36.196 | 326 | 166 | 6 | 8 | 322 | 7 | 301 | 1.01e-57 | 188 |
| MS.gene06500.t1 | MTR_6g043240 | 35.235 | 298 | 182 | 6 | 28 | 322 | 42 | 331 | 1.92e-57 | 189 |
| MS.gene06500.t1 | MTR_4g132110 | 32.923 | 325 | 201 | 5 | 9 | 322 | 10 | 328 | 7.09e-57 | 187 |
| MS.gene06500.t1 | MTR_3g105790 | 33.435 | 329 | 202 | 4 | 4 | 322 | 1 | 322 | 2.12e-56 | 186 |
| MS.gene06500.t1 | MTR_4g132110 | 32.424 | 330 | 201 | 6 | 9 | 322 | 10 | 333 | 1.20e-54 | 181 |
| MS.gene06500.t1 | MTR_5g033470 | 36.137 | 321 | 175 | 8 | 22 | 322 | 67 | 377 | 1.56e-52 | 177 |
| MS.gene06500.t1 | MTR_2g008160 | 36.039 | 308 | 155 | 8 | 21 | 322 | 17 | 288 | 9.67e-52 | 172 |
| MS.gene06500.t1 | MTR_0147s0010 | 31.056 | 322 | 183 | 5 | 25 | 321 | 74 | 381 | 9.88e-51 | 172 |
| MS.gene06500.t1 | MTR_1g066380 | 33.977 | 259 | 157 | 4 | 72 | 322 | 3 | 255 | 2.52e-47 | 160 |
| MS.gene06500.t1 | MTR_2g067450 | 33.861 | 316 | 170 | 10 | 28 | 321 | 11 | 309 | 1.55e-46 | 160 |
| MS.gene06500.t1 | MTR_3g072260 | 66.055 | 109 | 37 | 0 | 27 | 135 | 25 | 133 | 1.70e-46 | 154 |
| MS.gene06500.t1 | MTR_2g008160 | 42.775 | 173 | 95 | 3 | 21 | 193 | 17 | 185 | 1.09e-40 | 141 |
| MS.gene06500.t1 | MTR_2g029880 | 41.146 | 192 | 92 | 4 | 140 | 322 | 9 | 188 | 9.81e-38 | 134 |
| MS.gene06500.t1 | MTR_3g105790 | 35.537 | 242 | 143 | 3 | 91 | 322 | 8 | 246 | 2.61e-37 | 134 |
| MS.gene06500.t1 | MTR_2g077980 | 29.455 | 275 | 147 | 8 | 90 | 320 | 11 | 282 | 1.63e-27 | 108 |
| MS.gene06500.t1 | MTR_2g078560 | 30.631 | 222 | 118 | 4 | 133 | 318 | 95 | 316 | 2.07e-27 | 109 |
| MS.gene06500.t1 | MTR_5g074770 | 48.980 | 98 | 47 | 2 | 226 | 321 | 12 | 108 | 1.19e-26 | 101 |
| MS.gene06500.t1 | MTR_3g462850 | 37.324 | 142 | 77 | 5 | 192 | 322 | 9 | 149 | 7.89e-24 | 95.5 |
| MS.gene06500.t1 | MTR_7g086790 | 42.500 | 120 | 65 | 3 | 75 | 194 | 17 | 132 | 2.03e-23 | 95.9 |
| MS.gene06500.t1 | MTR_4g031040 | 35.673 | 171 | 71 | 4 | 89 | 259 | 3 | 134 | 1.36e-21 | 89.4 |
| MS.gene06500.t1 | MTR_4g114220 | 39.130 | 138 | 60 | 4 | 40 | 169 | 15 | 136 | 3.08e-21 | 88.6 |
| MS.gene06500.t1 | MTR_5g058120 | 33.121 | 157 | 95 | 3 | 164 | 318 | 7 | 155 | 1.12e-19 | 87.0 |
| MS.gene06500.t1 | MTR_1g089005 | 38.636 | 132 | 74 | 2 | 14 | 139 | 1 | 131 | 2.06e-19 | 84.0 |
| MS.gene06500.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 67 | 138 | 22 | 89 | 5.44e-18 | 78.2 |
| MS.gene06500.t1 | MTR_3g107060 | 26.374 | 273 | 132 | 9 | 44 | 301 | 92 | 310 | 8.93e-18 | 82.8 |
| MS.gene06500.t1 | MTR_1g098320 | 44.737 | 76 | 42 | 0 | 243 | 318 | 45 | 120 | 2.14e-17 | 77.8 |
| MS.gene06500.t1 | MTR_2g029930 | 37.069 | 116 | 41 | 4 | 14 | 111 | 1 | 102 | 1.69e-16 | 74.3 |
| MS.gene06500.t1 | MTR_5g022510 | 26.087 | 253 | 133 | 9 | 62 | 304 | 34 | 242 | 1.42e-14 | 73.2 |
| MS.gene06500.t1 | MTR_7g107500 | 42.857 | 84 | 47 | 1 | 239 | 322 | 15 | 97 | 1.54e-14 | 68.9 |
| MS.gene06500.t1 | MTR_5g022510 | 27.184 | 206 | 105 | 7 | 109 | 304 | 47 | 217 | 4.06e-14 | 71.6 |
| MS.gene06500.t1 | MTR_7g086785 | 29.787 | 141 | 93 | 2 | 74 | 214 | 4 | 138 | 8.94e-14 | 67.8 |
| MS.gene06500.t1 | MTR_7g086810 | 30.000 | 120 | 58 | 1 | 26 | 145 | 4 | 97 | 1.33e-13 | 69.7 |
| MS.gene06500.t1 | MTR_4g012865 | 39.437 | 71 | 43 | 0 | 25 | 95 | 74 | 144 | 3.17e-13 | 66.6 |
| MS.gene06500.t1 | MTR_0147s0040 | 37.662 | 77 | 48 | 0 | 244 | 320 | 5 | 81 | 2.02e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06500.t1 | AT5G05340 | 77.104 | 297 | 68 | 0 | 26 | 322 | 28 | 324 | 8.23e-173 | 482 |
| MS.gene06500.t1 | AT5G58400 | 61.392 | 316 | 121 | 1 | 8 | 322 | 10 | 325 | 4.61e-142 | 404 |
| MS.gene06500.t1 | AT5G58390 | 56.508 | 315 | 136 | 1 | 9 | 322 | 2 | 316 | 4.81e-129 | 371 |
| MS.gene06500.t1 | AT1G14550 | 53.943 | 317 | 138 | 5 | 9 | 322 | 10 | 321 | 1.73e-118 | 344 |
| MS.gene06500.t1 | AT5G06720 | 53.823 | 327 | 139 | 5 | 6 | 322 | 9 | 333 | 1.73e-118 | 345 |
| MS.gene06500.t1 | AT1G14540 | 53.376 | 311 | 141 | 3 | 14 | 322 | 7 | 315 | 5.83e-117 | 340 |
| MS.gene06500.t1 | AT5G06730 | 50.915 | 328 | 147 | 5 | 6 | 322 | 10 | 334 | 3.98e-113 | 332 |
| MS.gene06500.t1 | AT4G36430 | 49.530 | 319 | 151 | 3 | 12 | 322 | 14 | 330 | 2.36e-109 | 322 |
| MS.gene06500.t1 | AT2G18150 | 49.191 | 309 | 147 | 3 | 22 | 322 | 30 | 336 | 5.46e-108 | 318 |
| MS.gene06500.t1 | AT2G18140 | 49.032 | 310 | 148 | 3 | 21 | 322 | 28 | 335 | 1.24e-106 | 315 |
| MS.gene06500.t1 | AT5G66390 | 49.505 | 303 | 143 | 3 | 28 | 322 | 33 | 333 | 1.27e-105 | 312 |
| MS.gene06500.t1 | AT3G50990 | 50.974 | 308 | 141 | 4 | 23 | 322 | 36 | 341 | 2.07e-105 | 312 |
| MS.gene06500.t1 | AT1G44970 | 51.282 | 312 | 141 | 3 | 20 | 322 | 37 | 346 | 4.93e-105 | 311 |
| MS.gene06500.t1 | AT1G49570 | 49.338 | 302 | 143 | 3 | 26 | 318 | 46 | 346 | 6.75e-100 | 298 |
| MS.gene06500.t1 | AT4G08770 | 48.882 | 313 | 147 | 4 | 21 | 322 | 17 | 327 | 4.49e-99 | 296 |
| MS.gene06500.t1 | AT4G16270 | 50.000 | 304 | 138 | 5 | 28 | 322 | 50 | 348 | 5.64e-99 | 296 |
| MS.gene06500.t1 | AT4G08780 | 48.065 | 310 | 148 | 4 | 24 | 322 | 20 | 327 | 1.73e-98 | 294 |
| MS.gene06500.t1 | AT2G38390 | 47.130 | 331 | 159 | 7 | 4 | 322 | 7 | 333 | 3.86e-98 | 293 |
| MS.gene06500.t1 | AT3G32980 | 47.826 | 322 | 153 | 5 | 14 | 322 | 15 | 334 | 1.13e-97 | 292 |
| MS.gene06500.t1 | AT2G35380 | 46.519 | 316 | 154 | 3 | 20 | 322 | 22 | 335 | 1.87e-96 | 289 |
| MS.gene06500.t1 | AT5G19890 | 49.206 | 315 | 141 | 6 | 19 | 322 | 21 | 327 | 7.98e-96 | 287 |
| MS.gene06500.t1 | AT1G68850 | 42.484 | 306 | 165 | 3 | 28 | 322 | 30 | 335 | 2.21e-94 | 283 |
| MS.gene06500.t1 | AT2G38380 | 45.897 | 329 | 166 | 5 | 4 | 322 | 7 | 333 | 1.19e-93 | 282 |
| MS.gene06500.t1 | AT5G19880 | 46.273 | 322 | 158 | 5 | 14 | 322 | 10 | 329 | 1.41e-93 | 281 |
| MS.gene06500.t1 | AT3G49120 | 46.440 | 323 | 160 | 4 | 11 | 322 | 15 | 335 | 4.04e-93 | 281 |
| MS.gene06500.t1 | AT2G22420 | 43.653 | 323 | 170 | 4 | 7 | 322 | 2 | 319 | 8.40e-92 | 276 |
| MS.gene06500.t1 | AT3G49110 | 45.062 | 324 | 165 | 4 | 10 | 322 | 15 | 336 | 1.22e-91 | 277 |
| MS.gene06500.t1 | AT3G01190 | 41.231 | 325 | 175 | 7 | 7 | 322 | 4 | 321 | 2.58e-80 | 247 |
| MS.gene06500.t1 | AT5G51890 | 41.121 | 321 | 175 | 6 | 9 | 322 | 9 | 322 | 8.65e-80 | 246 |
| MS.gene06500.t1 | AT5G42180 | 41.693 | 319 | 171 | 7 | 11 | 321 | 5 | 316 | 5.66e-78 | 241 |
| MS.gene06500.t1 | AT5G15180 | 40.260 | 308 | 170 | 6 | 24 | 322 | 27 | 329 | 9.39e-78 | 241 |
| MS.gene06500.t1 | AT5G64120 | 42.282 | 298 | 157 | 6 | 32 | 322 | 39 | 328 | 6.75e-77 | 238 |
| MS.gene06500.t1 | AT2G41480 | 39.210 | 329 | 179 | 8 | 8 | 322 | 7 | 328 | 1.09e-75 | 235 |
| MS.gene06500.t1 | AT4G33420 | 39.365 | 315 | 183 | 5 | 9 | 322 | 18 | 325 | 2.26e-75 | 234 |
| MS.gene06500.t1 | AT1G05240 | 39.535 | 301 | 167 | 5 | 28 | 318 | 26 | 321 | 4.48e-75 | 234 |
| MS.gene06500.t1 | AT1G05250 | 39.535 | 301 | 167 | 5 | 28 | 318 | 26 | 321 | 4.48e-75 | 234 |
| MS.gene06500.t1 | AT4G33420 | 39.365 | 315 | 183 | 5 | 9 | 322 | 65 | 372 | 8.62e-75 | 234 |
| MS.gene06500.t1 | AT1G71695 | 41.806 | 299 | 167 | 4 | 28 | 322 | 44 | 339 | 1.11e-74 | 234 |
| MS.gene06500.t1 | AT5G17820 | 38.170 | 317 | 177 | 5 | 13 | 322 | 9 | 313 | 5.14e-74 | 231 |
| MS.gene06500.t1 | AT5G17820 | 38.170 | 317 | 177 | 5 | 13 | 322 | 62 | 366 | 3.89e-73 | 230 |
| MS.gene06500.t1 | AT3G03670 | 38.957 | 326 | 182 | 5 | 8 | 322 | 2 | 321 | 6.54e-73 | 228 |
| MS.gene06500.t1 | AT5G14130 | 37.461 | 323 | 187 | 5 | 11 | 322 | 12 | 330 | 1.44e-72 | 228 |
| MS.gene06500.t1 | AT1G05260 | 39.222 | 334 | 179 | 9 | 4 | 322 | 1 | 325 | 1.48e-72 | 227 |
| MS.gene06500.t1 | AT5G14130 | 37.461 | 323 | 187 | 5 | 11 | 322 | 53 | 371 | 3.79e-72 | 228 |
| MS.gene06500.t1 | AT2G35380 | 47.561 | 246 | 114 | 3 | 90 | 322 | 4 | 247 | 1.39e-71 | 222 |
| MS.gene06500.t1 | AT3G21770 | 38.907 | 311 | 171 | 7 | 20 | 318 | 21 | 324 | 2.44e-71 | 224 |
| MS.gene06500.t1 | AT4G26010 | 39.032 | 310 | 180 | 4 | 14 | 322 | 8 | 309 | 7.74e-71 | 222 |
| MS.gene06500.t1 | AT2G18980 | 38.298 | 329 | 184 | 7 | 5 | 322 | 3 | 323 | 8.06e-71 | 223 |
| MS.gene06500.t1 | AT4G26010 | 39.032 | 310 | 180 | 4 | 14 | 322 | 36 | 337 | 1.04e-70 | 223 |
| MS.gene06500.t1 | AT3G49960 | 38.138 | 333 | 183 | 6 | 1 | 318 | 1 | 325 | 1.55e-70 | 222 |
| MS.gene06500.t1 | AT4G37530 | 39.297 | 313 | 168 | 5 | 21 | 318 | 20 | 325 | 1.58e-70 | 222 |
| MS.gene06500.t1 | AT4G11290 | 36.842 | 323 | 193 | 4 | 9 | 322 | 6 | 326 | 1.76e-70 | 222 |
| MS.gene06500.t1 | AT5G40150 | 38.816 | 304 | 180 | 4 | 23 | 322 | 27 | 328 | 3.27e-70 | 221 |
| MS.gene06500.t1 | AT4G30170 | 39.482 | 309 | 167 | 6 | 26 | 322 | 25 | 325 | 4.92e-70 | 221 |
| MS.gene06500.t1 | AT1G77100 | 40.308 | 325 | 175 | 9 | 11 | 322 | 1 | 319 | 4.78e-69 | 218 |
| MS.gene06500.t1 | AT4G33870 | 34.524 | 336 | 177 | 4 | 26 | 320 | 66 | 399 | 1.56e-68 | 219 |
| MS.gene06500.t1 | AT5G39580 | 40.248 | 323 | 174 | 9 | 9 | 322 | 7 | 319 | 2.10e-68 | 216 |
| MS.gene06500.t1 | AT4G17690 | 38.889 | 306 | 183 | 3 | 20 | 322 | 18 | 322 | 5.13e-68 | 216 |
| MS.gene06500.t1 | AT3G28200 | 37.294 | 303 | 185 | 4 | 23 | 322 | 16 | 316 | 5.42e-68 | 215 |
| MS.gene06500.t1 | AT5G47000 | 37.539 | 317 | 191 | 4 | 11 | 322 | 16 | 330 | 6.33e-68 | 216 |
| MS.gene06500.t1 | AT5G67400 | 37.690 | 329 | 190 | 6 | 1 | 318 | 1 | 325 | 1.28e-67 | 215 |
| MS.gene06500.t1 | AT4G37520 | 38.312 | 308 | 168 | 6 | 26 | 318 | 25 | 325 | 4.34e-67 | 213 |
| MS.gene06500.t1 | AT2G34060 | 40.523 | 306 | 170 | 5 | 25 | 319 | 39 | 343 | 4.53e-67 | 214 |
| MS.gene06500.t1 | AT1G30870 | 38.033 | 305 | 169 | 6 | 28 | 322 | 51 | 345 | 7.04e-66 | 211 |
| MS.gene06500.t1 | AT1G24110 | 36.111 | 324 | 193 | 5 | 11 | 322 | 1 | 322 | 1.91e-65 | 209 |
| MS.gene06500.t1 | AT1G34510 | 37.500 | 304 | 181 | 6 | 20 | 322 | 14 | 309 | 3.77e-65 | 208 |
| MS.gene06500.t1 | AT4G37520 | 37.338 | 308 | 168 | 6 | 26 | 318 | 25 | 322 | 5.48e-65 | 208 |
| MS.gene06500.t1 | AT4G31760 | 35.061 | 328 | 196 | 4 | 4 | 322 | 7 | 326 | 6.39e-63 | 202 |
| MS.gene06500.t1 | AT4G25980 | 35.802 | 324 | 188 | 8 | 12 | 322 | 10 | 326 | 1.36e-62 | 202 |
| MS.gene06500.t1 | AT2G39040 | 38.339 | 313 | 179 | 7 | 22 | 322 | 40 | 350 | 4.09e-62 | 201 |
| MS.gene06500.t1 | AT5G64110 | 37.615 | 327 | 178 | 7 | 14 | 322 | 12 | 330 | 1.16e-61 | 199 |
| MS.gene06500.t1 | AT5G64100 | 37.209 | 301 | 169 | 6 | 32 | 322 | 41 | 331 | 3.00e-61 | 198 |
| MS.gene06500.t1 | AT4G37530 | 40.602 | 266 | 136 | 5 | 21 | 271 | 20 | 278 | 2.06e-60 | 195 |
| MS.gene06500.t1 | AT2G24800 | 37.049 | 305 | 180 | 4 | 26 | 322 | 29 | 329 | 1.83e-59 | 194 |
| MS.gene06500.t1 | AT4G21960 | 33.993 | 303 | 186 | 4 | 28 | 322 | 31 | 327 | 3.10e-57 | 188 |
| MS.gene06500.t1 | AT2G37130 | 32.692 | 312 | 199 | 6 | 17 | 322 | 21 | 327 | 1.02e-56 | 186 |
| MS.gene06500.t1 | AT2G43480 | 32.653 | 343 | 194 | 8 | 9 | 322 | 1 | 335 | 1.81e-56 | 186 |
| MS.gene06500.t1 | AT5G22410 | 35.866 | 329 | 187 | 12 | 7 | 321 | 6 | 324 | 3.40e-56 | 185 |
| MS.gene06500.t1 | AT3G17070 | 33.951 | 324 | 198 | 6 | 14 | 322 | 17 | 339 | 3.58e-56 | 186 |
| MS.gene06500.t1 | AT2G37130 | 32.660 | 297 | 191 | 5 | 32 | 322 | 3 | 296 | 5.28e-55 | 181 |
| MS.gene06500.t1 | AT5G24070 | 33.434 | 332 | 195 | 8 | 9 | 322 | 12 | 335 | 5.38e-55 | 182 |
| MS.gene06500.t1 | AT5G39580 | 37.931 | 232 | 134 | 5 | 9 | 240 | 7 | 228 | 2.28e-43 | 149 |
| MS.gene06500.t1 | AT4G25980 | 39.674 | 184 | 107 | 3 | 12 | 195 | 55 | 234 | 6.39e-40 | 142 |
| MS.gene06500.t1 | AT3G17070 | 31.801 | 261 | 168 | 5 | 70 | 322 | 18 | 276 | 3.24e-39 | 139 |
| MS.gene06500.t1 | AT2G24800 | 40.476 | 168 | 96 | 1 | 26 | 193 | 29 | 192 | 1.46e-36 | 132 |
| MS.gene06500.t1 | AT3G42570 | 38.462 | 91 | 55 | 1 | 104 | 193 | 57 | 147 | 5.82e-16 | 74.3 |
| MS.gene06500.t1 | AT4G35970 | 25.984 | 254 | 131 | 9 | 62 | 304 | 33 | 240 | 2.17e-15 | 75.5 |
| MS.gene06500.t1 | AT4G35970 | 26.923 | 234 | 114 | 9 | 62 | 284 | 33 | 220 | 3.77e-14 | 70.9 |
Find 85 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATCTGTTCTCATAAT+AGG | 0.139329 | 3.2:+79135061 | MS.gene06500:CDS |
| CCACGAGCAGAGTTTCTATT+TGG | 0.150735 | 3.2:-79135506 | None:intergenic |
| GATGACACATCAAGCTTTAC+TGG | 0.225638 | 3.2:+79135467 | MS.gene06500:CDS |
| AGAGAGTTTGGGACAAGTTT+TGG | 0.290073 | 3.2:-79135119 | None:intergenic |
| TCCCCTGATCCTGATGCCTT+TGG | 0.297710 | 3.2:-79136115 | None:intergenic |
| TTTCACTGTGGTAGAGAGTT+TGG | 0.308285 | 3.2:-79135131 | None:intergenic |
| GCTAATCTAGAACAATTTAA+AGG | 0.310910 | 3.2:-79135025 | None:intergenic |
| AAGCAAGGTGCACTAACTTT+AGG | 0.315415 | 3.2:+79136029 | MS.gene06500:CDS |
| CCCCTGATCCTGATGCCTTT+GGG | 0.331723 | 3.2:-79136114 | None:intergenic |
| TTCTATCTGTTCTCATAATA+GGG | 0.338026 | 3.2:+79135062 | MS.gene06500:CDS |
| CAATGTGACCAAATCCTTGC+TGG | 0.359724 | 3.2:-79135858 | None:intergenic |
| AGGATCAGGGGACAACAATT+TGG | 0.366559 | 3.2:+79136126 | MS.gene06500:CDS |
| TGCCCAAAGGCATCAGGATC+AGG | 0.367698 | 3.2:+79136112 | MS.gene06500:CDS |
| CATTCGGGCCTCCTTTGATA+TGG | 0.369430 | 3.2:-79135170 | None:intergenic |
| AAGGATTTGGTCACATTGTC+AGG | 0.376723 | 3.2:+79135863 | MS.gene06500:CDS |
| TTCACTGTGGTAGAGAGTTT+GGG | 0.382072 | 3.2:-79135130 | None:intergenic |
| TTGAGGTTGGAAGTTGGTGC+TGG | 0.389387 | 3.2:-79135800 | None:intergenic |
| AGCAAGGTGCACTAACTTTA+GGG | 0.395482 | 3.2:+79136030 | MS.gene06500:CDS |
| TGGTCTTTCCAGCAAGGATT+TGG | 0.396887 | 3.2:+79135850 | MS.gene06500:CDS |
| TAGATTAGCCATGATCAGTT+TGG | 0.401228 | 3.2:+79135039 | MS.gene06500:CDS |
| CACGAGCAGAGTTTCTATTT+GGG | 0.402776 | 3.2:-79135505 | None:intergenic |
| ATTTAAACTTAAATATTAGT+TGG | 0.419303 | 3.2:-79136395 | None:intergenic |
| TTTAGCTTGGAGGTCCAACC+TGG | 0.429670 | 3.2:+79135714 | MS.gene06500:intron |
| TGAACAGGTGGACACACAAT+TGG | 0.432448 | 3.2:+79136004 | MS.gene06500:intron |
| GAGGATAGAAGCACCCATTC+GGG | 0.437322 | 3.2:-79135185 | None:intergenic |
| TCAAATTGCCCAAAGGCATC+AGG | 0.463959 | 3.2:+79136106 | MS.gene06500:CDS |
| TGTTGTGTTGTTTAGCTTGG+AGG | 0.467863 | 3.2:+79135704 | MS.gene06500:intron |
| CCTGATCTCTCCATTTGATC+CGG | 0.472052 | 3.2:-79136356 | None:intergenic |
| AAACCTCTCACCGGATCAAA+TGG | 0.474986 | 3.2:+79136346 | MS.gene06500:CDS |
| CCAACCTGGAATGTAAAACT+TGG | 0.477614 | 3.2:+79135728 | MS.gene06500:CDS |
| TGGAAGAAGAGATGCTAAAA+CGG | 0.480930 | 3.2:+79135748 | MS.gene06500:CDS |
| GGAGGATAGAAGCACCCATT+CGG | 0.481217 | 3.2:-79135186 | None:intergenic |
| TAGTTGTTGTCAAAAGAAGT+AGG | 0.483476 | 3.2:-79136169 | None:intergenic |
| CGCCGTTGGTCTTTCCAGCA+AGG | 0.488220 | 3.2:+79135844 | MS.gene06500:CDS |
| GTTGGAAGTTGGTGCTGGGA+TGG | 0.488543 | 3.2:-79135795 | None:intergenic |
| CCGGATCAAATGGAGAGATC+AGG | 0.489446 | 3.2:+79136356 | MS.gene06500:CDS |
| AGTTGTTGTCAAAAGAAGTA+GGG | 0.492854 | 3.2:-79136168 | None:intergenic |
| ACCTCAATGTTTAGCGCCGT+TGG | 0.493682 | 3.2:+79135830 | MS.gene06500:CDS |
| TGAGGTGAGTGTATTGAGGT+TGG | 0.493828 | 3.2:-79135813 | None:intergenic |
| TGCCGCTGCTATGATCAAGA+TGG | 0.496335 | 3.2:+79136315 | MS.gene06500:CDS |
| AGTGTATTGAGGTTGGAAGT+TGG | 0.502920 | 3.2:-79135806 | None:intergenic |
| AGATAGAACCAAACTGATCA+TGG | 0.508325 | 3.2:-79135047 | None:intergenic |
| CAAGAACCTTGTTCAGAACA+AGG | 0.510966 | 3.2:+79136195 | MS.gene06500:CDS |
| TGAGGTTGGAAGTTGGTGCT+GGG | 0.515449 | 3.2:-79135799 | None:intergenic |
| ACCACTCACTATTGAGTTGG+TGG | 0.516561 | 3.2:-79136257 | None:intergenic |
| TTGAAATTGCAGGGATGTGA+TGG | 0.527302 | 3.2:+79135431 | MS.gene06500:intron |
| CATATCAAAGGAGGCCCGAA+TGG | 0.532190 | 3.2:+79135171 | MS.gene06500:CDS |
| ATCAGCACATGAGACAACTC+TGG | 0.534642 | 3.2:-79135576 | None:intergenic |
| GCCGCTGCTATGATCAAGAT+GGG | 0.536610 | 3.2:+79136316 | MS.gene06500:CDS |
| AGCAAATGCAGCATTTATGT+TGG | 0.537064 | 3.2:-79136071 | None:intergenic |
| ACTTGTAGAAAGTTGTGCAT+TGG | 0.538174 | 3.2:-79135089 | None:intergenic |
| ATGTGATGGATCAATTCTCT+TGG | 0.538296 | 3.2:+79135445 | MS.gene06500:CDS |
| ATATCAAAGGAGGCCCGAAT+GGG | 0.543061 | 3.2:+79135172 | MS.gene06500:CDS |
| GCCCAAAGGCATCAGGATCA+GGG | 0.544250 | 3.2:+79136113 | MS.gene06500:CDS |
| TCTCCATTTGATCCGGTGAG+AGG | 0.565633 | 3.2:-79136349 | None:intergenic |
| TCAGCACATGAGACAACTCT+GGG | 0.572628 | 3.2:-79135575 | None:intergenic |
| CCAAATAGAAACTCTGCTCG+TGG | 0.581384 | 3.2:+79135506 | MS.gene06500:CDS |
| ATAACCACTCACTATTGAGT+TGG | 0.582034 | 3.2:-79136260 | None:intergenic |
| TCTGGGGCATACGTTCTCTA+CGG | 0.585231 | 3.2:-79135558 | None:intergenic |
| ACATTGAGGTGAGTGTATTG+AGG | 0.600421 | 3.2:-79135817 | None:intergenic |
| GTAGGGGTCTGAAGATCAAG+AGG | 0.601828 | 3.2:-79136151 | None:intergenic |
| TGATATGGCAGTTTGTAGTG+TGG | 0.608611 | 3.2:-79135155 | None:intergenic |
| GACACACAATTGGACAAGCA+AGG | 0.609025 | 3.2:+79136014 | MS.gene06500:CDS |
| AAGAACCTTGTTCAGAACAA+GGG | 0.610050 | 3.2:+79136196 | MS.gene06500:CDS |
| ATCCTTGCTGGAAAGACCAA+CGG | 0.610155 | 3.2:-79135846 | None:intergenic |
| GGAGATATTAAACCTCTCAC+CGG | 0.610656 | 3.2:+79136337 | MS.gene06500:CDS |
| GAAGACCCTTGTTCTGAACA+AGG | 0.613843 | 3.2:-79136201 | None:intergenic |
| CATAGCAGCGGCAAAATCAG+AGG | 0.614979 | 3.2:-79136305 | None:intergenic |
| ACTACAAACTGCCATATCAA+AGG | 0.619874 | 3.2:+79135159 | MS.gene06500:CDS |
| AGCAATCGTGGAAGAACAAG+CGG | 0.622282 | 3.2:-79135207 | None:intergenic |
| CCCAAAGGCATCAGGATCAG+GGG | 0.627223 | 3.2:+79136114 | MS.gene06500:CDS |
| AGTCTGCGGCAGCAATAGCA+AGG | 0.631012 | 3.2:-79135601 | None:intergenic |
| ACCAACGGCGCTAAACATTG+AGG | 0.633810 | 3.2:-79135831 | None:intergenic |
| TTACATTGACAAAGCAATCG+TGG | 0.634168 | 3.2:-79135219 | None:intergenic |
| TCCCATCTTGATCATAGCAG+CGG | 0.634299 | 3.2:-79136317 | None:intergenic |
| TACAATTGCAACAGAGTCTG+CGG | 0.641374 | 3.2:-79135615 | None:intergenic |
| GTTGTTGTCAAAAGAAGTAG+GGG | 0.641646 | 3.2:-79136167 | None:intergenic |
| GAGGCAATCAAATTGCCCAA+AGG | 0.672476 | 3.2:+79136099 | MS.gene06500:CDS |
| ACAAACTGCCATATCAAAGG+AGG | 0.679028 | 3.2:+79135162 | MS.gene06500:CDS |
| TCCACCAACTCAATAGTGAG+TGG | 0.679546 | 3.2:+79136256 | MS.gene06500:CDS |
| TGGGATGGCAGTGTTAGCAG+CGG | 0.688826 | 3.2:-79135780 | None:intergenic |
| ATGCTGCATTTGCTAGCACG+AGG | 0.690267 | 3.2:+79136080 | MS.gene06500:CDS |
| AATCGTGGAAGAACAAGCGG+AGG | 0.704179 | 3.2:-79135204 | None:intergenic |
| TTGTAGTGTGGATTTCACTG+TGG | 0.710735 | 3.2:-79135143 | None:intergenic |
| CAGCACATGAGACAACTCTG+GGG | 0.824049 | 3.2:-79135574 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTTTGATAAGTTTTT+AGG | + | chr3.2:79135278-79135297 | MS.gene06500:intron | 10.0% |
| !!! | TTTTTACTTATATTTAAAGT+CGG | + | chr3.2:79135921-79135940 | MS.gene06500:intron | 10.0% |
| !!! | TGATTGGTTAATTAATTCAT+TGG | - | chr3.2:79135655-79135674 | None:intergenic | 20.0% |
| ! | ATAATATGTGTGAAAAGACT+TGG | - | chr3.2:79135326-79135345 | None:intergenic | 25.0% |
| ! | TTCTATCTGTTCTCATAATA+GGG | + | chr3.2:79135062-79135081 | MS.gene06500:CDS | 25.0% |
| !! | GCTAATCTAGAACAATTTAA+AGG | - | chr3.2:79135028-79135047 | None:intergenic | 25.0% |
| AGTTGTTGTCAAAAGAAGTA+GGG | - | chr3.2:79136171-79136190 | None:intergenic | 30.0% | |
| GAAGTCTTAATTGATTGAAC+AGG | + | chr3.2:79135989-79136008 | MS.gene06500:intron | 30.0% | |
| GTTCTATCTGTTCTCATAAT+AGG | + | chr3.2:79135061-79135080 | MS.gene06500:CDS | 30.0% | |
| TAAACAACACAACATTTGCA+TGG | - | chr3.2:79135698-79135717 | None:intergenic | 30.0% | |
| TAGTTGTTGTCAAAAGAAGT+AGG | - | chr3.2:79136172-79136191 | None:intergenic | 30.0% | |
| ! | CAGGTATCGTTATATTGATT+TGG | + | chr3.2:79135882-79135901 | MS.gene06500:intron | 30.0% |
| ! | TAAAAAGTTGTTGGTCTGAA+TGG | - | chr3.2:79136228-79136247 | None:intergenic | 30.0% |
| ! | TCAGACCAACAACTTTTTAA+CGG | + | chr3.2:79136229-79136248 | MS.gene06500:CDS | 30.0% |
| !! | AAATGTTGTGTTGTTTAGCT+TGG | + | chr3.2:79135701-79135720 | MS.gene06500:intron | 30.0% |
| AAATCAGAGGAAAAAGAGCT+TGG | - | chr3.2:79136295-79136314 | None:intergenic | 35.0% | |
| AAGAACCTTGTTCAGAACAA+GGG | + | chr3.2:79136196-79136215 | MS.gene06500:CDS | 35.0% | |
| AATCAGAGGAAAAAGAGCTT+GGG | - | chr3.2:79136294-79136313 | None:intergenic | 35.0% | |
| ACTACAAACTGCCATATCAA+AGG | + | chr3.2:79135159-79135178 | MS.gene06500:CDS | 35.0% | |
| ACTTGTAGAAAGTTGTGCAT+TGG | - | chr3.2:79135092-79135111 | None:intergenic | 35.0% | |
| AGATAGAACCAAACTGATCA+TGG | - | chr3.2:79135050-79135069 | None:intergenic | 35.0% | |
| AGCAAATGCAGCATTTATGT+TGG | - | chr3.2:79136074-79136093 | None:intergenic | 35.0% | |
| ATAACCACTCACTATTGAGT+TGG | - | chr3.2:79136263-79136282 | None:intergenic | 35.0% | |
| GTCTTAATTGATTGAACAGG+TGG | + | chr3.2:79135992-79136011 | MS.gene06500:intron | 35.0% | |
| GTTGTTGTCAAAAGAAGTAG+GGG | - | chr3.2:79136170-79136189 | None:intergenic | 35.0% | |
| TACTCATTTCTCAATCGAGA+AGG | + | chr3.2:79135950-79135969 | MS.gene06500:intron | 35.0% | |
| TGGAAGAAGAGATGCTAAAA+CGG | + | chr3.2:79135748-79135767 | MS.gene06500:CDS | 35.0% | |
| TTACATTGACAAAGCAATCG+TGG | - | chr3.2:79135222-79135241 | None:intergenic | 35.0% | |
| TTGTACGCATTGAAATTGCA+GGG | + | chr3.2:79135422-79135441 | MS.gene06500:intron | 35.0% | |
| TTTGTACGCATTGAAATTGC+AGG | + | chr3.2:79135421-79135440 | MS.gene06500:intron | 35.0% | |
| ! | TAGATTAGCCATGATCAGTT+TGG | + | chr3.2:79135039-79135058 | MS.gene06500:CDS | 35.0% |
| ! | TCTTCCAAGTTTTACATTCC+AGG | - | chr3.2:79135735-79135754 | None:intergenic | 35.0% |
| !! | ATGTGATGGATCAATTCTCT+TGG | + | chr3.2:79135445-79135464 | MS.gene06500:CDS | 35.0% |
| !! | TGCACTAGCTAGATTTTGAT+TGG | - | chr3.2:79135671-79135690 | None:intergenic | 35.0% |
| AAGCAAGGTGCACTAACTTT+AGG | + | chr3.2:79136029-79136048 | MS.gene06500:CDS | 40.0% | |
| ACAAACTGCCATATCAAAGG+AGG | + | chr3.2:79135162-79135181 | MS.gene06500:CDS | 40.0% | |
| ACATTGAGGTGAGTGTATTG+AGG | - | chr3.2:79135820-79135839 | None:intergenic | 40.0% | |
| AGCAAGGTGCACTAACTTTA+GGG | + | chr3.2:79136030-79136049 | MS.gene06500:CDS | 40.0% | |
| AGTGTATTGAGGTTGGAAGT+TGG | - | chr3.2:79135809-79135828 | None:intergenic | 40.0% | |
| CAAGAACCTTGTTCAGAACA+AGG | + | chr3.2:79136195-79136214 | MS.gene06500:CDS | 40.0% | |
| CACGAGCAGAGTTTCTATTT+GGG | - | chr3.2:79135508-79135527 | None:intergenic | 40.0% | |
| CCAACCTGGAATGTAAAACT+TGG | + | chr3.2:79135728-79135747 | MS.gene06500:CDS | 40.0% | |
| GATGACACATCAAGCTTTAC+TGG | + | chr3.2:79135467-79135486 | MS.gene06500:CDS | 40.0% | |
| GGAGATATTAAACCTCTCAC+CGG | + | chr3.2:79136337-79136356 | MS.gene06500:CDS | 40.0% | |
| TACAATTGCAACAGAGTCTG+CGG | - | chr3.2:79135618-79135637 | None:intergenic | 40.0% | |
| TGATATGGCAGTTTGTAGTG+TGG | - | chr3.2:79135158-79135177 | None:intergenic | 40.0% | |
| TTCACTGTGGTAGAGAGTTT+GGG | - | chr3.2:79135133-79135152 | None:intergenic | 40.0% | |
| TTGAAATTGCAGGGATGTGA+TGG | + | chr3.2:79135431-79135450 | MS.gene06500:intron | 40.0% | |
| TTGTAGTGTGGATTTCACTG+TGG | - | chr3.2:79135146-79135165 | None:intergenic | 40.0% | |
| TTTCACTGTGGTAGAGAGTT+TGG | - | chr3.2:79135134-79135153 | None:intergenic | 40.0% | |
| ! | AAGGATTTGGTCACATTGTC+AGG | + | chr3.2:79135863-79135882 | MS.gene06500:CDS | 40.0% |
| ! | ACCAACAACTTTTTAACGGC+GGG | + | chr3.2:79136233-79136252 | MS.gene06500:CDS | 40.0% |
| ! | CCAAGTTTTACATTCCAGGT+TGG | - | chr3.2:79135731-79135750 | None:intergenic | 40.0% |
| ! | GACCAACAACTTTTTAACGG+CGG | + | chr3.2:79136232-79136251 | MS.gene06500:CDS | 40.0% |
| !! | AGAGAGTTTGGGACAAGTTT+TGG | - | chr3.2:79135122-79135141 | None:intergenic | 40.0% |
| !! | CTTCGTTGACTTATCGAATG+AGG | + | chr3.2:79135390-79135409 | MS.gene06500:intron | 40.0% |
| !! | TGTTGTGTTGTTTAGCTTGG+AGG | + | chr3.2:79135704-79135723 | MS.gene06500:intron | 40.0% |
| AAACCTCTCACCGGATCAAA+TGG | + | chr3.2:79136346-79136365 | MS.gene06500:CDS | 45.0% | |
| ACCCGCCGTTAAAAAGTTGT+TGG | - | chr3.2:79136237-79136256 | None:intergenic | 45.0% | |
| AGCAATCGTGGAAGAACAAG+CGG | - | chr3.2:79135210-79135229 | None:intergenic | 45.0% | |
| AGGATCAGGGGACAACAATT+TGG | + | chr3.2:79136126-79136145 | MS.gene06500:CDS | 45.0% | |
| ATATCAAAGGAGGCCCGAAT+GGG | + | chr3.2:79135172-79135191 | MS.gene06500:CDS | 45.0% | |
| ATCAGCACATGAGACAACTC+TGG | - | chr3.2:79135579-79135598 | None:intergenic | 45.0% | |
| ATCCTTGCTGGAAAGACCAA+CGG | - | chr3.2:79135849-79135868 | None:intergenic | 45.0% | |
| CAATGTGACCAAATCCTTGC+TGG | - | chr3.2:79135861-79135880 | None:intergenic | 45.0% | |
| CCAAATAGAAACTCTGCTCG+TGG | + | chr3.2:79135506-79135525 | MS.gene06500:CDS | 45.0% | |
| CCACGAGCAGAGTTTCTATT+TGG | - | chr3.2:79135509-79135528 | None:intergenic | 45.0% | |
| CCTGATCTCTCCATTTGATC+CGG | - | chr3.2:79136359-79136378 | None:intergenic | 45.0% | |
| GACACACAATTGGACAAGCA+AGG | + | chr3.2:79136014-79136033 | MS.gene06500:CDS | 45.0% | |
| GAGGCAATCAAATTGCCCAA+AGG | + | chr3.2:79136099-79136118 | MS.gene06500:CDS | 45.0% | |
| TCAGCACATGAGACAACTCT+GGG | - | chr3.2:79135578-79135597 | None:intergenic | 45.0% | |
| TCCACCAACTCAATAGTGAG+TGG | + | chr3.2:79136256-79136275 | MS.gene06500:CDS | 45.0% | |
| TCCCATCTTGATCATAGCAG+CGG | - | chr3.2:79136320-79136339 | None:intergenic | 45.0% | |
| TGAACAGGTGGACACACAAT+TGG | + | chr3.2:79136004-79136023 | MS.gene06500:intron | 45.0% | |
| TGAGGTGAGTGTATTGAGGT+TGG | - | chr3.2:79135816-79135835 | None:intergenic | 45.0% | |
| TGGTCTTTCCAGCAAGGATT+TGG | + | chr3.2:79135850-79135869 | MS.gene06500:CDS | 45.0% | |
| ! | GAAGACCCTTGTTCTGAACA+AGG | - | chr3.2:79136204-79136223 | None:intergenic | 45.0% |
| !! | ACCACTCACTATTGAGTTGG+TGG | - | chr3.2:79136260-79136279 | None:intergenic | 45.0% |
| !! | TCAAATTGCCCAAAGGCATC+AGG | + | chr3.2:79136106-79136125 | MS.gene06500:CDS | 45.0% |
| AATCGTGGAAGAACAAGCGG+AGG | - | chr3.2:79135207-79135226 | None:intergenic | 50.0% | |
| ACCAACGGCGCTAAACATTG+AGG | - | chr3.2:79135834-79135853 | None:intergenic | 50.0% | |
| ACCTCAATGTTTAGCGCCGT+TGG | + | chr3.2:79135830-79135849 | MS.gene06500:CDS | 50.0% | |
| CAGCACATGAGACAACTCTG+GGG | - | chr3.2:79135577-79135596 | None:intergenic | 50.0% | |
| CATAGCAGCGGCAAAATCAG+AGG | - | chr3.2:79136308-79136327 | None:intergenic | 50.0% | |
| CATATCAAAGGAGGCCCGAA+TGG | + | chr3.2:79135171-79135190 | MS.gene06500:CDS | 50.0% | |
| CATTCGGGCCTCCTTTGATA+TGG | - | chr3.2:79135173-79135192 | None:intergenic | 50.0% | |
| CCGGATCAAATGGAGAGATC+AGG | + | chr3.2:79136356-79136375 | MS.gene06500:CDS | 50.0% | |
| GCCGCTGCTATGATCAAGAT+GGG | + | chr3.2:79136316-79136335 | MS.gene06500:CDS | 50.0% | |
| GTAGGGGTCTGAAGATCAAG+AGG | - | chr3.2:79136154-79136173 | None:intergenic | 50.0% | |
| TCTCCATTTGATCCGGTGAG+AGG | - | chr3.2:79136352-79136371 | None:intergenic | 50.0% | |
| TGCCGCTGCTATGATCAAGA+TGG | + | chr3.2:79136315-79136334 | MS.gene06500:CDS | 50.0% | |
| ! | ATGCTGCATTTGCTAGCACG+AGG | + | chr3.2:79136080-79136099 | MS.gene06500:CDS | 50.0% |
| ! | TCTGGGGCATACGTTCTCTA+CGG | - | chr3.2:79135561-79135580 | None:intergenic | 50.0% |
| !! | GAGGATAGAAGCACCCATTC+GGG | - | chr3.2:79135188-79135207 | None:intergenic | 50.0% |
| !! | GGAGGATAGAAGCACCCATT+CGG | - | chr3.2:79135189-79135208 | None:intergenic | 50.0% |
| !! | TGAGGTTGGAAGTTGGTGCT+GGG | - | chr3.2:79135802-79135821 | None:intergenic | 50.0% |
| !! | TTGAGGTTGGAAGTTGGTGC+TGG | - | chr3.2:79135803-79135822 | None:intergenic | 50.0% |
| !! | TTTAGCTTGGAGGTCCAACC+TGG | + | chr3.2:79135714-79135733 | MS.gene06500:intron | 50.0% |
| AGTCTGCGGCAGCAATAGCA+AGG | - | chr3.2:79135604-79135623 | None:intergenic | 55.0% | |
| CCCCTGATCCTGATGCCTTT+GGG | - | chr3.2:79136117-79136136 | None:intergenic | 55.0% | |
| TCCCCTGATCCTGATGCCTT+TGG | - | chr3.2:79136118-79136137 | None:intergenic | 55.0% | |
| TGGGATGGCAGTGTTAGCAG+CGG | - | chr3.2:79135783-79135802 | None:intergenic | 55.0% | |
| !! | CCCAAAGGCATCAGGATCAG+GGG | + | chr3.2:79136114-79136133 | MS.gene06500:CDS | 55.0% |
| !! | GCCCAAAGGCATCAGGATCA+GGG | + | chr3.2:79136113-79136132 | MS.gene06500:CDS | 55.0% |
| !! | GTTGGAAGTTGGTGCTGGGA+TGG | - | chr3.2:79135798-79135817 | None:intergenic | 55.0% |
| !! | TGCCCAAAGGCATCAGGATC+AGG | + | chr3.2:79136112-79136131 | MS.gene06500:CDS | 55.0% |
| !! | CGCCGTTGGTCTTTCCAGCA+AGG | + | chr3.2:79135844-79135863 | MS.gene06500:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79135019 | 79136402 | 79135019 | ID=MS.gene06500 |
| chr3.2 | mRNA | 79135019 | 79136402 | 79135019 | ID=MS.gene06500.t1;Parent=MS.gene06500 |
| chr3.2 | exon | 79135019 | 79135237 | 79135019 | ID=MS.gene06500.t1.exon1;Parent=MS.gene06500.t1 |
| chr3.2 | CDS | 79135019 | 79135237 | 79135019 | ID=cds.MS.gene06500.t1;Parent=MS.gene06500.t1 |
| chr3.2 | exon | 79135443 | 79135634 | 79135443 | ID=MS.gene06500.t1.exon2;Parent=MS.gene06500.t1 |
| chr3.2 | CDS | 79135443 | 79135634 | 79135443 | ID=cds.MS.gene06500.t1;Parent=MS.gene06500.t1 |
| chr3.2 | exon | 79135719 | 79135884 | 79135719 | ID=MS.gene06500.t1.exon3;Parent=MS.gene06500.t1 |
| chr3.2 | CDS | 79135719 | 79135884 | 79135719 | ID=cds.MS.gene06500.t1;Parent=MS.gene06500.t1 |
| chr3.2 | exon | 79136011 | 79136402 | 79136011 | ID=MS.gene06500.t1.exon4;Parent=MS.gene06500.t1 |
| chr3.2 | CDS | 79136011 | 79136402 | 79136011 | ID=cds.MS.gene06500.t1;Parent=MS.gene06500.t1 |
| Gene Sequence |
| Protein sequence |
