Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065485.t1 | XP_003624436.1 | 95.2 | 703 | 28 | 2 | 1 | 703 | 1 | 697 | 0.00E+00 | 1249.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065485.t1 | Q9LW26 | 56.2 | 614 | 262 | 4 | 95 | 703 | 90 | 701 | 1.6e-203 | 710.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065485.t1 | G7KW54 | 95.2 | 703 | 28 | 2 | 1 | 703 | 1 | 697 | 0.0e+00 | 1249.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene065485 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene065485 | 0.824355 | 8.44E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene065485 | 0.803314 | 3.70E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene065485 | 0.813358 | 2.67E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene065485 | -0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene065485 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene055505 | MS.gene065485 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene065485 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene065485 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene060084 | MS.gene065485 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene065485 | 0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene060851 | MS.gene065485 | 0.819817 | 9.52E-53 | -1.69E-46 |
| MS.gene060852 | MS.gene065485 | 0.816756 | 4.69E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene065485 | 0.800874 | 1.17E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065485.t1 | MTR_7g083200 | 95.590 | 703 | 25 | 3 | 1 | 703 | 1 | 697 | 0.0 | 1355 |
| MS.gene065485.t1 | MTR_7g083130 | 74.894 | 705 | 141 | 3 | 1 | 703 | 1 | 671 | 0.0 | 1059 |
| MS.gene065485.t1 | MTR_7g083180 | 77.856 | 569 | 110 | 2 | 135 | 703 | 14 | 566 | 0.0 | 898 |
| MS.gene065485.t1 | MTR_7g083130 | 78.131 | 567 | 119 | 2 | 139 | 703 | 16 | 579 | 0.0 | 889 |
| MS.gene065485.t1 | MTR_7g083130 | 79.636 | 550 | 107 | 2 | 156 | 703 | 5 | 551 | 0.0 | 888 |
| MS.gene065485.t1 | MTR_7g114340 | 54.397 | 614 | 273 | 4 | 93 | 702 | 104 | 714 | 0.0 | 663 |
| MS.gene065485.t1 | MTR_3g107900 | 68.852 | 122 | 29 | 4 | 8 | 123 | 11 | 129 | 2.13e-41 | 147 |
| MS.gene065485.t1 | MTR_7g083140 | 46.617 | 133 | 32 | 2 | 1 | 133 | 1 | 94 | 7.46e-26 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065485.t1 | AT5G41130 | 57.257 | 627 | 265 | 2 | 79 | 703 | 60 | 685 | 0.0 | 747 |
| MS.gene065485.t1 | AT5G41120 | 56.571 | 624 | 269 | 1 | 82 | 703 | 63 | 686 | 0.0 | 737 |
| MS.gene065485.t1 | AT5G41130 | 54.962 | 655 | 264 | 3 | 79 | 703 | 60 | 713 | 0.0 | 734 |
| MS.gene065485.t1 | AT5G41130 | 55.846 | 650 | 261 | 5 | 79 | 703 | 60 | 708 | 0.0 | 731 |
| MS.gene065485.t1 | AT5G41120 | 56.571 | 624 | 264 | 3 | 82 | 703 | 63 | 681 | 0.0 | 731 |
| MS.gene065485.t1 | AT3G02030 | 55.682 | 616 | 269 | 3 | 89 | 703 | 54 | 666 | 0.0 | 719 |
| MS.gene065485.t1 | AT3G26840 | 53.929 | 649 | 289 | 6 | 63 | 703 | 55 | 701 | 0.0 | 710 |
| MS.gene065485.t1 | AT3G02030 | 54.589 | 621 | 274 | 4 | 84 | 703 | 49 | 662 | 0.0 | 704 |
| MS.gene065485.t1 | AT1G54570 | 51.729 | 665 | 302 | 9 | 47 | 702 | 49 | 703 | 0.0 | 684 |
| MS.gene065485.t1 | AT5G41120 | 55.779 | 597 | 263 | 1 | 108 | 703 | 6 | 602 | 0.0 | 683 |
| MS.gene065485.t1 | AT3G26820 | 51.311 | 610 | 258 | 5 | 98 | 703 | 60 | 634 | 0.0 | 619 |
| MS.gene065485.t1 | AT3G26820 | 50.476 | 525 | 222 | 4 | 98 | 619 | 60 | 549 | 3.12e-179 | 522 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGATCTTGTACTAATTT+TGG | 0.137308 | 7.3:-24766592 | MS.gene065485:CDS |
| GGGCGGTTCTACTATTATTT+TGG | 0.145454 | 7.3:-24760870 | MS.gene065485:CDS |
| TCCTCTTATGCTCTTCTTAC+CGG | 0.215995 | 7.3:-24768978 | MS.gene065485:CDS |
| GTTTGATTCTATTACTTCTT+TGG | 0.217172 | 7.3:+24762778 | None:intergenic |
| ACAAGATATATGGGCCTATT+TGG | 0.226217 | 7.3:+24766669 | None:intergenic |
| AGGGCCTCTGAGGCTGGTTT+TGG | 0.229526 | 7.3:-24764915 | MS.gene065485:CDS |
| GAGCGGTTGGAAGGAATATT+TGG | 0.243010 | 7.3:-24769089 | MS.gene065485:CDS |
| TATCTTGTTGGAGAATCTTT+AGG | 0.281938 | 7.3:-24766654 | MS.gene065485:CDS |
| AGATTCTCCAACAAGATATA+TGG | 0.288306 | 7.3:+24766659 | None:intergenic |
| AGCACCAAAAGGTACGATTT+TGG | 0.291222 | 7.3:+24761489 | None:intergenic |
| TTTGACACATTCAGAATTAT+GGG | 0.295042 | 7.3:-24762349 | MS.gene065485:CDS |
| TATTTCACATCATCAGAAAC+TGG | 0.301590 | 7.3:-24767280 | MS.gene065485:CDS |
| ATCAGGATGGCAGCAAGATT+TGG | 0.306081 | 7.3:-24761514 | MS.gene065485:CDS |
| GTGTCAAAAGAAGATATTTC+TGG | 0.311359 | 7.3:+24762364 | None:intergenic |
| CGGAACTCGGTCGACGGATA+TGG | 0.315574 | 7.3:+24769234 | None:intergenic |
| GTCCACTGTCATCAAATTTA+CGG | 0.323014 | 7.3:+24763070 | None:intergenic |
| CCAAACTTTACAGGGATTGA+TGG | 0.327432 | 7.3:-24767318 | MS.gene065485:intron |
| AATATGAATGTTCACCAAAT+AGG | 0.327756 | 7.3:-24766683 | MS.gene065485:CDS |
| ATGGTGTTACGAGTTGTAAC+TGG | 0.328519 | 7.3:+24765834 | None:intergenic |
| CTGAACAATCTGAGTTTATC+AGG | 0.348316 | 7.3:-24761531 | MS.gene065485:CDS |
| GTGAAGAATACAAATTATTC+TGG | 0.350619 | 7.3:-24761555 | MS.gene065485:CDS |
| AAGGCAGGAGAGAGCGAGTC+AGG | 0.360651 | 7.3:+24765797 | None:intergenic |
| ATTACTTCTTTGGCTTCATA+AGG | 0.361523 | 7.3:+24762788 | None:intergenic |
| GATAGCATAAAGACGTGAAT+TGG | 0.361808 | 7.3:+24764548 | None:intergenic |
| AATACAGCAAGAGAGCTAAT+TGG | 0.362339 | 7.3:-24764863 | MS.gene065485:CDS |
| GGAGCCAAAATCGTACCTTT+TGG | 0.362674 | 7.3:-24761493 | MS.gene065485:CDS |
| TAGAACCGCCCTGGAACTTT+AGG | 0.366128 | 7.3:+24760882 | None:intergenic |
| GAAAGAAATATCCTTGTTAG+AGG | 0.372246 | 7.3:-24762433 | MS.gene065485:CDS |
| CCTGTTGGCTAGGTAGTAAT+TGG | 0.372519 | 7.3:+24763133 | None:intergenic |
| TTCCACAAAAGTGTTTCTTT+TGG | 0.374962 | 7.3:+24764603 | None:intergenic |
| AGGGATTGATGGCTTGGGAC+TGG | 0.377756 | 7.3:-24767307 | MS.gene065485:CDS |
| GACATACCTGTTGTTTCAAT+TGG | 0.388020 | 7.3:+24760843 | None:intergenic |
| CTTTACAGGGATTGATGGCT+TGG | 0.388141 | 7.3:-24767313 | MS.gene065485:intron |
| TTCTGTCTCTTGAACATCAT+AGG | 0.389979 | 7.3:+24762400 | None:intergenic |
| CGCTGTAATGCTTTCAACCT+TGG | 0.398930 | 7.3:-24762575 | MS.gene065485:CDS |
| TCTATTTCAGACTTAAAGTA+AGG | 0.401097 | 7.3:+24761227 | None:intergenic |
| CATATCCGTCGACCGAGTTC+CGG | 0.406419 | 7.3:-24769233 | MS.gene065485:CDS |
| GCGAGCCGCCACAGCTTCTC+AGG | 0.411059 | 7.3:-24769300 | MS.gene065485:CDS |
| GAGCAAGCGAAGGAGTTTAT+CGG | 0.418062 | 7.3:-24769067 | MS.gene065485:CDS |
| ACGATTGTAAAGGGACTTGC+TGG | 0.418226 | 7.3:-24762544 | MS.gene065485:CDS |
| AGGATTGGAATTAGTTCCCT+TGG | 0.419546 | 7.3:-24762473 | MS.gene065485:CDS |
| ACCAATCAAATTTCAAATGT+TGG | 0.420485 | 7.3:+24760548 | None:intergenic |
| AATGATGTTCGATCCGCAAC+TGG | 0.425877 | 7.3:+24767046 | None:intergenic |
| CTGAGAATGTTAGGCAAGGC+AGG | 0.426867 | 7.3:+24765782 | None:intergenic |
| GGAAAACCAATTGAAACAAC+AGG | 0.429142 | 7.3:-24760849 | MS.gene065485:intron |
| ATTAGGAGGGCCTCTGAGGC+TGG | 0.429634 | 7.3:-24764921 | MS.gene065485:intron |
| GCTGTCAGACTGAGAATGTT+AGG | 0.433586 | 7.3:+24765773 | None:intergenic |
| CCCGGTAAGAAGAGCATAAG+AGG | 0.434154 | 7.3:+24768977 | None:intergenic |
| AAAAGCTTAAAGAGGTTAGT+TGG | 0.434613 | 7.3:+24762310 | None:intergenic |
| CTGATAAACTCAGATTGTTC+AGG | 0.436965 | 7.3:+24761532 | None:intergenic |
| CCTCTTATGCTCTTCTTACC+GGG | 0.437553 | 7.3:-24768977 | MS.gene065485:intron |
| AGAGAAGCGTTGGGAAGAGA+AGG | 0.438549 | 7.3:-24769131 | MS.gene065485:CDS |
| GGAACTTTAGGCAAAATTCC+AGG | 0.442557 | 7.3:+24760894 | None:intergenic |
| CGCCGTTGGAGTGTGGTTCG+CGG | 0.442956 | 7.3:-24769012 | MS.gene065485:CDS |
| AAGAGGTTAGTTGGTGCTAC+AGG | 0.444060 | 7.3:+24762319 | None:intergenic |
| GCGGCTCGCGGCGGAAGAGA+GGG | 0.446455 | 7.3:+24769314 | None:intergenic |
| TTGTTTAACAGGAAGGAAAC+AGG | 0.447144 | 7.3:-24760732 | MS.gene065485:intron |
| ACAACTCGTAACACCATTGT+TGG | 0.454613 | 7.3:-24765828 | MS.gene065485:CDS |
| GCATCCCTCCAGGATATAAC+AGG | 0.457404 | 7.3:+24762269 | None:intergenic |
| AAGAAGTAATAGAATCAAAC+AGG | 0.458228 | 7.3:-24762775 | MS.gene065485:intron |
| GTTGGGTACCACATGTTGCT+AGG | 0.459218 | 7.3:-24762493 | MS.gene065485:CDS |
| CTTTCACCTTCCTGTTGGCT+AGG | 0.460615 | 7.3:+24763123 | None:intergenic |
| GTACCACATGTTGCTAGGAT+TGG | 0.461893 | 7.3:-24762488 | MS.gene065485:CDS |
| CCAATTACTACCTAGCCAAC+AGG | 0.464648 | 7.3:-24763133 | MS.gene065485:CDS |
| GAGAAAACAATACCAGTAGT+AGG | 0.466452 | 7.3:+24763043 | None:intergenic |
| AGAAGAGGATAGAAGAAATA+CGG | 0.466666 | 7.3:-24769161 | MS.gene065485:CDS |
| GATTCTCCAACAAGATATAT+GGG | 0.472347 | 7.3:+24766660 | None:intergenic |
| GTAGTCTTTCACCTTCCTGT+TGG | 0.474910 | 7.3:+24763118 | None:intergenic |
| TTTAGGAGGGTGCCTCGCAC+TGG | 0.475805 | 7.3:-24766637 | MS.gene065485:CDS |
| CTCAAACTTTGATACTCAGC+AGG | 0.477620 | 7.3:-24764521 | MS.gene065485:intron |
| CGACGGATATGGCGAAGCGC+GGG | 0.479541 | 7.3:+24769245 | None:intergenic |
| GGATGCGTGAGGCTCTTCAT+AGG | 0.481595 | 7.3:-24762252 | MS.gene065485:CDS |
| CAGTGGACATTTCCTACTAC+TGG | 0.481660 | 7.3:-24763055 | MS.gene065485:intron |
| CTCCCTTGAGGATGGTTACC+AGG | 0.482485 | 7.3:+24762870 | None:intergenic |
| AGAAGCGCCGGCGGACGCCA+TGG | 0.486064 | 7.3:+24769357 | None:intergenic |
| GAAGAGAGGGGAGGAAACGC+CGG | 0.486171 | 7.3:+24769327 | None:intergenic |
| GGGATTGATGGCTTGGGACT+GGG | 0.487489 | 7.3:-24767306 | MS.gene065485:CDS |
| TGGTACCCAACAAACAAAAC+AGG | 0.489487 | 7.3:+24762505 | None:intergenic |
| AGAAAGAGAGACGGAGCGGT+TGG | 0.491606 | 7.3:-24769102 | MS.gene065485:CDS |
| TGTAATGCTTTCAACCTTGG+AGG | 0.491650 | 7.3:-24762572 | MS.gene065485:CDS |
| GAAGCGTTGGGAAGAGAAGG+AGG | 0.493786 | 7.3:-24769128 | MS.gene065485:CDS |
| TTCACCTCGGATTCAGAGAA+TGG | 0.495484 | 7.3:-24769269 | MS.gene065485:CDS |
| GGCGGCTCGCGGCGGAAGAG+AGG | 0.498527 | 7.3:+24769313 | None:intergenic |
| GAGGATGGAACGATTGTAAA+GGG | 0.498908 | 7.3:-24762553 | MS.gene065485:CDS |
| TGGCAGCTACTTCATTCAGC+AGG | 0.499610 | 7.3:-24765859 | MS.gene065485:intron |
| TTTACAGGGATTGATGGCTT+GGG | 0.500146 | 7.3:-24767312 | MS.gene065485:intron |
| CGAGACACTATACTTCTGTA+AGG | 0.501205 | 7.3:+24760611 | None:intergenic |
| GTTGGAGTGTGGTTCGCGGT+TGG | 0.502183 | 7.3:-24769008 | MS.gene065485:CDS |
| TCACATGTCCTGTTATATCC+TGG | 0.504779 | 7.3:-24762277 | MS.gene065485:CDS |
| AATAGGCCCATATATCTTGT+TGG | 0.505582 | 7.3:-24766666 | MS.gene065485:CDS |
| AGAGAGACGGAGCGGTTGGA+AGG | 0.509222 | 7.3:-24769098 | MS.gene065485:CDS |
| CGGTGGAGATAGAGAAGCGT+TGG | 0.513159 | 7.3:-24769141 | MS.gene065485:CDS |
| AATCAACAAGTGCATATGCC+TGG | 0.521515 | 7.3:-24760912 | MS.gene065485:CDS |
| CGGCTCGCGGCGGAAGAGAG+GGG | 0.522786 | 7.3:+24769315 | None:intergenic |
| TGGAAGATAAAAGCTTAAAG+AGG | 0.525193 | 7.3:+24762302 | None:intergenic |
| TCTTTGGCTTCATAAGGTGT+AGG | 0.525363 | 7.3:+24762794 | None:intergenic |
| AGAGCCTCACGCATCCCTCC+AGG | 0.527791 | 7.3:+24762259 | None:intergenic |
| ATGCTTTCAACCTTGGAGGA+TGG | 0.530038 | 7.3:-24762568 | MS.gene065485:CDS |
| TTACAATTGTCGCCGGAACT+CGG | 0.530521 | 7.3:+24769221 | None:intergenic |
| GGCTGGTGCTAGTGGTGAGG+TGG | 0.533032 | 7.3:-24760937 | MS.gene065485:CDS |
| CTTGTTGGAGAATCTTTAGG+AGG | 0.534475 | 7.3:-24766651 | MS.gene065485:CDS |
| AGAGGCGAAACGAGAAGAAG+AGG | 0.540701 | 7.3:-24769176 | MS.gene065485:CDS |
| TCCTCAGTTACAATTGTCGC+CGG | 0.543074 | 7.3:+24769214 | None:intergenic |
| AACATTCTCAGTCTGACAGC+AGG | 0.543399 | 7.3:-24765770 | MS.gene065485:intron |
| ATTATAAATTCGAGAAACCA+AGG | 0.546619 | 7.3:+24762456 | None:intergenic |
| AAATAATAGTAGAACCGCCC+TGG | 0.547543 | 7.3:+24760873 | None:intergenic |
| ATATAACAGGACATGTGACT+TGG | 0.551807 | 7.3:+24762282 | None:intergenic |
| TACAATCGTTCCATCCTCCA+AGG | 0.552792 | 7.3:+24762558 | None:intergenic |
| TCTTCTCCAACAGCACCAAA+AGG | 0.558469 | 7.3:+24761478 | None:intergenic |
| CACATCATCAGAAACTGGGA+AGG | 0.558593 | 7.3:-24767275 | MS.gene065485:intron |
| GGAGGATGGAACGATTGTAA+AGG | 0.561696 | 7.3:-24762554 | MS.gene065485:CDS |
| GCTGTTGGAGAAGATGATCT+TGG | 0.562041 | 7.3:-24761469 | MS.gene065485:CDS |
| AATTAGTTGAGAGAACAGTT+AGG | 0.563393 | 7.3:-24766710 | MS.gene065485:CDS |
| GAAGCTGTGGCGGCTCGCGG+CGG | 0.563769 | 7.3:+24769305 | None:intergenic |
| TCGACGGATATGGCGAAGCG+CGG | 0.565102 | 7.3:+24769244 | None:intergenic |
| AAATCTAGGGCTGGTGCTAG+TGG | 0.568736 | 7.3:-24760945 | MS.gene065485:intron |
| TGAGAAGCTGTGGCGGCTCG+CGG | 0.569375 | 7.3:+24769302 | None:intergenic |
| CTTGCTGGAATTCCTTCAGA+GGG | 0.571046 | 7.3:-24762529 | MS.gene065485:CDS |
| ATGTAAAACCATGTGTAGCT+TGG | 0.573546 | 7.3:+24760579 | None:intergenic |
| TTGTTGGAGAATCTTTAGGA+GGG | 0.574232 | 7.3:-24766650 | MS.gene065485:CDS |
| GCGTTGGGAAGAGAAGGAGG+AGG | 0.576766 | 7.3:-24769125 | MS.gene065485:CDS |
| GATTTCCTGAGAAGCTGTGG+CGG | 0.576856 | 7.3:+24769295 | None:intergenic |
| GGTGGAGATAGAGAAGCGTT+GGG | 0.577027 | 7.3:-24769140 | MS.gene065485:CDS |
| CAAACGAGGCTATGCAGTTG+AGG | 0.580682 | 7.3:-24761196 | MS.gene065485:intron |
| GAGTTTATCGGAGCTGCTGA+CGG | 0.582342 | 7.3:-24769055 | MS.gene065485:CDS |
| GCAGGAAGGCAGCATTGACC+TGG | 0.588790 | 7.3:-24762888 | MS.gene065485:intron |
| TAGGGCTGGTGCTAGTGGTG+AGG | 0.589170 | 7.3:-24760940 | MS.gene065485:CDS |
| AGAGGATAGAAGAAATACGG+TGG | 0.590400 | 7.3:-24769158 | MS.gene065485:CDS |
| GGAATATTTGGAGCAAGCGA+AGG | 0.594391 | 7.3:-24769077 | MS.gene065485:CDS |
| TGACCTGGTAACCATCCTCA+AGG | 0.595560 | 7.3:-24762873 | MS.gene065485:CDS |
| TGTGATTGATTATGATGACT+TGG | 0.596528 | 7.3:-24761258 | MS.gene065485:CDS |
| CTCGCGGCGGAAGAGAGGGG+AGG | 0.597413 | 7.3:+24769318 | None:intergenic |
| GTAAGAAGCTCCCTTGAGGA+TGG | 0.598907 | 7.3:+24762862 | None:intergenic |
| ATATCTTGAAGTGCAATCTG+AGG | 0.602775 | 7.3:-24760678 | MS.gene065485:CDS |
| TGTCGCCGGAACTCGGTCGA+CGG | 0.605240 | 7.3:+24769228 | None:intergenic |
| AACAAAACAGGACCCTCTGA+AGG | 0.606300 | 7.3:+24762517 | None:intergenic |
| GTGCTTGCATATTCCAGTTG+CGG | 0.606464 | 7.3:-24767059 | MS.gene065485:CDS |
| GCGTGAGGCTCTTCATAGGA+AGG | 0.607196 | 7.3:-24762248 | MS.gene065485:intron |
| TTATTCTACCAAGCTACACA+TGG | 0.608958 | 7.3:-24760587 | MS.gene065485:CDS |
| AGGAGGAGGAGAAAGAGAGA+CGG | 0.609860 | 7.3:-24769111 | MS.gene065485:CDS |
| ACTTGCTGGAATTCCTTCAG+AGG | 0.612101 | 7.3:-24762530 | MS.gene065485:CDS |
| TGGTGTTACGAGTTGTAACT+GGG | 0.612204 | 7.3:+24765835 | None:intergenic |
| GACGGATATGGCGAAGCGCG+GGG | 0.614032 | 7.3:+24769246 | None:intergenic |
| TTCTCTCAACTAATTTCACA+AGG | 0.616362 | 7.3:+24766718 | None:intergenic |
| TTTGATTTCCTGAGAAGCTG+TGG | 0.617147 | 7.3:+24769292 | None:intergenic |
| CTTACAGAAGTATAGTGTCT+CGG | 0.619552 | 7.3:-24760610 | MS.gene065485:CDS |
| ACAATCTGAGTTTATCAGGA+TGG | 0.620014 | 7.3:-24761527 | MS.gene065485:CDS |
| ATTTCACATCATCAGAAACT+GGG | 0.622836 | 7.3:-24767279 | MS.gene065485:CDS |
| TTTATCGGAGCTGCTGACGG+TGG | 0.623928 | 7.3:-24769052 | MS.gene065485:CDS |
| GGGGCCATTCTCTGAATCCG+AGG | 0.624339 | 7.3:+24769265 | None:intergenic |
| TTGGCTTCATAAGGTGTAGG+CGG | 0.624918 | 7.3:+24762797 | None:intergenic |
| TCAGGAAATCAAATTCACCT+CGG | 0.625452 | 7.3:-24769282 | MS.gene065485:CDS |
| TTACATTAGGAGGGCCTCTG+AGG | 0.626545 | 7.3:-24764925 | MS.gene065485:intron |
| ATGTCCTGTTATATCCTGGA+GGG | 0.629187 | 7.3:-24762273 | MS.gene065485:CDS |
| AACCGCGAACCACACTCCAA+CGG | 0.632073 | 7.3:+24769010 | None:intergenic |
| TTAGTACAAGATCAATATCA+CGG | 0.633196 | 7.3:+24766598 | None:intergenic |
| TCAGGCAAAGTTTCCAACAA+TGG | 0.636770 | 7.3:+24765815 | None:intergenic |
| CTCCGTAAATTTGATGACAG+TGG | 0.637460 | 7.3:-24763072 | MS.gene065485:CDS |
| GAGCTGCAACAGCCAGTGCG+AGG | 0.638770 | 7.3:+24766625 | None:intergenic |
| TTATAAATTCGAGAAACCAA+GGG | 0.642809 | 7.3:+24762457 | None:intergenic |
| TTATCCAAAACCAGCCTCAG+AGG | 0.643378 | 7.3:+24764911 | None:intergenic |
| GACCTGGTAACCATCCTCAA+GGG | 0.659371 | 7.3:-24762872 | MS.gene065485:CDS |
| CATGTCCTGTTATATCCTGG+AGG | 0.662328 | 7.3:-24762274 | MS.gene065485:CDS |
| ATATCCTGGAGGGATGCGTG+AGG | 0.665086 | 7.3:-24762263 | MS.gene065485:CDS |
| CAGACTGAGAATGTTAGGCA+AGG | 0.665768 | 7.3:+24765778 | None:intergenic |
| TCCGGCGACAATTGTAACTG+AGG | 0.668679 | 7.3:-24769215 | MS.gene065485:CDS |
| CATAGTCATGATACTTGCCA+CGG | 0.669005 | 7.3:+24762834 | None:intergenic |
| GATGTGCTATTCCTCTAACA+AGG | 0.670143 | 7.3:+24762422 | None:intergenic |
| GGAGAAAAGAACAACGACAG+AGG | 0.670501 | 7.3:-24769194 | MS.gene065485:CDS |
| GAGGAGAAAGAGAGACGGAG+CGG | 0.671066 | 7.3:-24769106 | MS.gene065485:CDS |
| GGTAGTAAGAAGCTCCCTTG+AGG | 0.674200 | 7.3:+24762858 | None:intergenic |
| CTGCTGACGGTGGACCTCCG+CGG | 0.689424 | 7.3:-24769042 | MS.gene065485:CDS |
| ATTCCAATCCTAGCAACATG+TGG | 0.689864 | 7.3:+24762485 | None:intergenic |
| AACGGCGAAAACCACCGCGG+AGG | 0.696752 | 7.3:+24769028 | None:intergenic |
| CTGACGGTGGACCTCCGCGG+TGG | 0.699075 | 7.3:-24769039 | MS.gene065485:CDS |
| TTACTACCTAGCCAACAGGA+AGG | 0.706722 | 7.3:-24763129 | MS.gene065485:CDS |
| ATACTCCAGATTGATTAATG+CGG | 0.708885 | 7.3:-24762605 | MS.gene065485:intron |
| GGAGCTTCTTACTACCGCCG+TGG | 0.715510 | 7.3:-24762851 | MS.gene065485:CDS |
| AGTCATGATACTTGCCACGG+CGG | 0.728282 | 7.3:+24762837 | None:intergenic |
| TCCAACGGCGAAAACCACCG+CGG | 0.754753 | 7.3:+24769025 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24760553 | 24769377 | 24760553 | ID=MS.gene065485 |
| chr7.3 | mRNA | 24760553 | 24769377 | 24760553 | ID=MS.gene065485.t1;Parent=MS.gene065485 |
| chr7.3 | exon | 24768978 | 24769377 | 24768978 | ID=MS.gene065485.t1.exon1;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24768978 | 24769377 | 24768978 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24767276 | 24767327 | 24767276 | ID=MS.gene065485.t1.exon2;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24767276 | 24767327 | 24767276 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24767041 | 24767096 | 24767041 | ID=MS.gene065485.t1.exon3;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24767041 | 24767096 | 24767041 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24766583 | 24766741 | 24766583 | ID=MS.gene065485.t1.exon4;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24766583 | 24766741 | 24766583 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24765771 | 24765875 | 24765771 | ID=MS.gene065485.t1.exon5;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24765771 | 24765875 | 24765771 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24764832 | 24764938 | 24764832 | ID=MS.gene065485.t1.exon6;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24764832 | 24764938 | 24764832 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24764522 | 24764643 | 24764522 | ID=MS.gene065485.t1.exon7;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24764522 | 24764643 | 24764522 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24763056 | 24763164 | 24763056 | ID=MS.gene065485.t1.exon8;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24763056 | 24763164 | 24763056 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24762776 | 24762906 | 24762776 | ID=MS.gene065485.t1.exon9;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24762776 | 24762906 | 24762776 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24762249 | 24762618 | 24762249 | ID=MS.gene065485.t1.exon10;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24762249 | 24762618 | 24762249 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24761465 | 24761578 | 24761465 | ID=MS.gene065485.t1.exon11;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24761465 | 24761578 | 24761465 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24761197 | 24761282 | 24761197 | ID=MS.gene065485.t1.exon12;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24761197 | 24761282 | 24761197 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24760850 | 24760959 | 24760850 | ID=MS.gene065485.t1.exon13;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24760850 | 24760959 | 24760850 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| chr7.3 | exon | 24760553 | 24760743 | 24760553 | ID=MS.gene065485.t1.exon14;Parent=MS.gene065485.t1 |
| chr7.3 | CDS | 24760553 | 24760743 | 24760553 | ID=cds.MS.gene065485.t1;Parent=MS.gene065485.t1 |
| Gene Sequence |
| Protein sequence |
