Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060940.t1 | XP_003609761.1 | 96.3 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 4.90E-118 | 433.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060940.t1 | Q9SWB6 | 82.4 | 216 | 38 | 0 | 1 | 216 | 14 | 229 | 6.6e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060940.t1 | G7JMU3 | 96.3 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 3.6e-118 | 433.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene060940 | 0.815172 | 1.06E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene060940 | 0.845965 | 2.92E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene060940 | 0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene060940 | -0.819836 | 9.42E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene060940 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene060940 | 0.826829 | 2.19E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene060940 | 0.818278 | 2.13E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene060940 | 0.844515 | 7.21E-59 | -1.69E-46 |
| MS.gene053494 | MS.gene060940 | 0.812386 | 4.35E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene060940 | 0.83146 | 1.65E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene060940 | 0.838016 | 3.69E-57 | -1.69E-46 |
| MS.gene055701 | MS.gene060940 | 0.820621 | 6.23E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene060940 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene060940 | 0.8347 | 2.58E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene060942 | 0.936674 | 1.19E-97 | -1.69E-46 |
| MS.gene060940 | MS.gene060943 | 0.911657 | 4.74E-83 | -1.69E-46 |
| MS.gene060940 | MS.gene060998 | 0.819386 | 1.19E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene061002 | 0.969365 | 5.14E-130 | -1.69E-46 |
| MS.gene060940 | MS.gene06344 | 0.804403 | 2.20E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene06503 | 0.82508 | 5.70E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene065164 | 0.832845 | 7.49E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene065485 | 0.800874 | 1.17E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene066362 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene06652 | 0.829335 | 5.45E-55 | -1.69E-46 |
| MS.gene060940 | MS.gene068592 | 0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene069025 | 0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene069559 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene070491 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene071343 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene071407 | 0.818283 | 2.13E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene071438 | -0.82347 | 1.36E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene072564 | 0.806933 | 6.47E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene072565 | 0.807141 | 5.84E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene074091 | 0.810586 | 1.07E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene074499 | 0.804817 | 1.80E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene08779 | 0.82374 | 1.18E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene09310 | 0.812282 | 4.58E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene22820 | -0.804249 | 2.37E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene23318 | 0.823213 | 1.56E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene24227 | 0.821792 | 3.34E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene26483 | -0.806559 | 7.75E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene26514 | 0.828305 | 9.68E-55 | -1.69E-46 |
| MS.gene060940 | MS.gene27008 | 0.811566 | 6.57E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene27271 | 0.812079 | 5.08E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene28862 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene29000 | 0.842767 | 2.12E-58 | -1.69E-46 |
| MS.gene060940 | MS.gene29405 | 0.814669 | 1.37E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene29986 | 0.840893 | 6.61E-58 | -1.69E-46 |
| MS.gene060940 | MS.gene31059 | 0.840448 | 8.64E-58 | -1.69E-46 |
| MS.gene060940 | MS.gene31116 | 0.850152 | 2.04E-60 | -1.69E-46 |
| MS.gene060940 | MS.gene33065 | 0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene33198 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene34028 | 0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene35523 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene39313 | 0.822879 | 1.87E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene39638 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene40946 | 0.812646 | 3.82E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene41037 | 0.812804 | 3.53E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene42572 | -0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene43782 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene45171 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene45533 | 0.854825 | 9.51E-62 | -1.69E-46 |
| MS.gene060940 | MS.gene47798 | 0.810059 | 1.39E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene50108 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene50741 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene51067 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene51182 | 0.812203 | 4.77E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene52448 | 0.827561 | 1.46E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene52512 | 0.821856 | 3.23E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene53483 | 0.801898 | 7.24E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene54787 | 0.84913 | 3.94E-60 | -1.69E-46 |
| MS.gene060940 | MS.gene56290 | 0.829582 | 4.75E-55 | -1.69E-46 |
| MS.gene060940 | MS.gene56488 | 0.84424 | 8.55E-59 | -1.69E-46 |
| MS.gene060940 | MS.gene56870 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene59149 | 0.815174 | 1.06E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene60024 | 0.804124 | 2.51E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene60286 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene62587 | 0.816355 | 5.77E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene62623 | 0.860651 | 1.78E-63 | -1.69E-46 |
| MS.gene060940 | MS.gene63058 | 0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene63882 | 0.803318 | 3.69E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene66968 | 0.836776 | 7.67E-57 | -1.69E-46 |
| MS.gene060940 | MS.gene69268 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene70819 | 0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene72142 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene73759 | 0.811079 | 8.38E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene75128 | 0.814713 | 1.34E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene75614 | 0.847812 | 9.12E-60 | -1.69E-46 |
| MS.gene060940 | MS.gene76514 | 0.808628 | 2.82E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene77971 | -0.81865 | 1.75E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene77972 | -0.81184 | 5.72E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene78166 | 0.802886 | 4.54E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene78202 | 0.808279 | 3.35E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene78205 | 0.834138 | 3.56E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene78405 | 0.819363 | 1.21E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene78629 | -0.822385 | 2.44E-53 | -1.69E-46 |
| MS.gene060940 | MS.gene79683 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene79842 | 0.804564 | 2.03E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene80298 | 0.831676 | 1.46E-55 | -1.69E-46 |
| MS.gene060940 | MS.gene80919 | 0.814581 | 1.43E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene81381 | 0.800782 | 1.23E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene81388 | 0.815511 | 8.91E-52 | -1.69E-46 |
| MS.gene060940 | MS.gene82350 | 0.838518 | 2.74E-57 | -1.69E-46 |
| MS.gene060940 | MS.gene82352 | 0.834976 | 2.19E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene82358 | 0.833832 | 4.25E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene82976 | 0.827877 | 1.23E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene82978 | 0.85078 | 1.36E-60 | -1.69E-46 |
| MS.gene060940 | MS.gene83132 | 0.800066 | 1.72E-48 | -1.69E-46 |
| MS.gene060940 | MS.gene84382 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene84401 | 0.836798 | 7.58E-57 | -1.69E-46 |
| MS.gene060940 | MS.gene84404 | 0.81034 | 1.21E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene87170 | 0.840294 | 9.48E-58 | -1.69E-46 |
| MS.gene060940 | MS.gene88755 | 0.806053 | 9.91E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene89434 | 0.806165 | 9.39E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene92043 | 0.82409 | 9.75E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene92548 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene93128 | 0.814361 | 1.60E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene93890 | 0.805769 | 1.14E-49 | -1.69E-46 |
| MS.gene060940 | MS.gene96220 | 0.810571 | 1.08E-50 | -1.69E-46 |
| MS.gene060940 | MS.gene97270 | 0.839215 | 1.81E-57 | -1.69E-46 |
| MS.gene060940 | MS.gene98543 | 0.800991 | 1.11E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060940.t1 | MTR_4g121940 | 96.296 | 216 | 8 | 0 | 1 | 216 | 16 | 231 | 1.42e-158 | 437 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060940.t1 | AT3G16990 | 61.395 | 215 | 83 | 0 | 1 | 215 | 6 | 220 | 1.17e-99 | 288 |
Find 0 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATATTAATAGAGATG+TGG | - | 32442:15140-15159 | MS.gene060940:intron | 20.0% |
| !! | TCAAATAAGTCAATTTAAAC+AGG | + | 32442:15012-15031 | None:intergenic | 20.0% |
| !!! | AGTTGTTTTTCCATATAAAA+GGG | - | 32442:15077-15096 | MS.gene060940:intron | 20.0% |
| !!! | TCAATTTATTTCAATTTTGC+AGG | - | 32442:14650-14669 | MS.gene060940:CDS | 20.0% |
| !!! | TTCATAATGAGTTCTAATAA+CGG | + | 32442:14930-14949 | None:intergenic | 20.0% |
| ! | ACTCATTATGAAGGTTTATT+TGG | - | 32442:14938-14957 | MS.gene060940:intron | 25.0% |
| ! | ATACATGCTCATAATTATCT+AGG | + | 32442:15506-15525 | None:intergenic | 25.0% |
| ! | CTCATTATGAAGGTTTATTT+GGG | - | 32442:14939-14958 | MS.gene060940:intron | 25.0% |
| ! | GTTATTAGAACTCATTATGA+AGG | - | 32442:14929-14948 | MS.gene060940:intron | 25.0% |
| ! | TACATGCTCATAATTATCTA+GGG | + | 32442:15505-15524 | None:intergenic | 25.0% |
| ! | TCATTATGAAGGTTTATTTG+GGG | - | 32442:14940-14959 | MS.gene060940:intron | 25.0% |
| !! | TAGTTTTTGTTAGGTTTTTG+AGG | + | 32442:14864-14883 | None:intergenic | 25.0% |
| !!! | CAGTTGTTTTTCCATATAAA+AGG | - | 32442:15076-15095 | MS.gene060940:intron | 25.0% |
| AACCTAACAAAAACTATTGC+AGG | - | 32442:14868-14887 | MS.gene060940:intron | 30.0% | |
| AATCTCATTCCTTCAAAACA+TGG | - | 32442:14572-14591 | MS.gene060940:CDS | 30.0% | |
| ACATGCTCATAATTATCTAG+GGG | + | 32442:15504-15523 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | 32442:15402-15421 | MS.gene060940:intron | 30.0% | |
| CTCTCAAGGATGAAATATTA+TGG | - | 32442:14790-14809 | MS.gene060940:intron | 30.0% | |
| GATGATGTGGAAGTTATATT+GGG | - | 32442:14756-14775 | MS.gene060940:CDS | 30.0% | |
| TTGAACATGAAGTTCATTTC+TGG | - | 32442:15806-15825 | MS.gene060940:CDS | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | 32442:15431-15450 | MS.gene060940:intron | 30.0% | |
| TTGCAATTTCTCTTCATTCA+GGG | + | 32442:15281-15300 | None:intergenic | 30.0% | |
| TTTGAAGGAATGAGATTGAA+CGG | + | 32442:14569-14588 | None:intergenic | 30.0% | |
| TTTGACCTTATCTACTGTAT+AGG | - | 32442:15027-15046 | MS.gene060940:intron | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | 32442:15430-15449 | MS.gene060940:intron | 30.0% | |
| TTTGCAATTTCTCTTCATTC+AGG | + | 32442:15282-15301 | None:intergenic | 30.0% | |
| ! | TACCTGCAATAGTTTTTGTT+AGG | + | 32442:14873-14892 | None:intergenic | 30.0% |
| ! | TGATGATGTGGAAGTTATAT+TGG | - | 32442:14755-14774 | MS.gene060940:CDS | 30.0% |
| !!! | TCTAGTTTTTGCTAGTATAC+CGG | - | 32442:14982-15001 | MS.gene060940:intron | 30.0% |
| AAAAACACCACCAGAATTGA+AGG | - | 32442:15651-15670 | MS.gene060940:intron | 35.0% | |
| AAGTTTGATGAGTCAAGATG+TGG | - | 32442:15546-15565 | MS.gene060940:CDS | 35.0% | |
| ACTAACGAAGTTTGCATTCA+GGG | - | 32442:15338-15357 | MS.gene060940:intron | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | 32442:15401-15420 | MS.gene060940:intron | 35.0% | |
| GTTCTCCTATACAGTAGATA+AGG | + | 32442:15035-15054 | None:intergenic | 35.0% | |
| TAAGAGAGAAGCCAACAAAT+GGG | - | 32442:14815-14834 | MS.gene060940:intron | 35.0% | |
| TTAAGAGAGAAGCCAACAAA+TGG | - | 32442:14814-14833 | MS.gene060940:intron | 35.0% | |
| TTTGCACACTGTATTGAAGA+AGG | - | 32442:15625-15644 | MS.gene060940:CDS | 35.0% | |
| ! | AATGAGTTCTAATAACGGCA+TGG | + | 32442:14925-14944 | None:intergenic | 35.0% |
| ! | GTTACACACACCCTTTTATA+TGG | + | 32442:15090-15109 | None:intergenic | 35.0% |
| ! | TATTTCAATTTTGCAGGCTC+AGG | - | 32442:14656-14675 | MS.gene060940:CDS | 35.0% |
| ! | TGACTATCTTTTGCAGAGAT+TGG | + | 32442:15720-15739 | None:intergenic | 35.0% |
| ! | TTCTGATGATGAGCTAAAGA+AGG | - | 32442:15759-15778 | MS.gene060940:CDS | 35.0% |
| !! | AGTCATTTTAGTCCCTGAAT+GGG | - | 32442:15235-15254 | MS.gene060940:intron | 35.0% |
| !! | TAGTCATTTTAGTCCCTGAA+TGG | - | 32442:15234-15253 | MS.gene060940:intron | 35.0% |
| AAGAGAGAAGCCAACAAATG+GGG | - | 32442:14816-14835 | MS.gene060940:intron | 40.0% | |
| AAGGAGACTTGTGAAAGATG+GGG | - | 32442:15670-15689 | MS.gene060940:intron | 40.0% | |
| ATCAGCACACTAGCAACAAA+TGG | + | 32442:14708-14727 | None:intergenic | 40.0% | |
| CACGGATGGAGAGAATAAAA+GGG | + | 32442:14540-14559 | None:intergenic | 40.0% | |
| GAAGGAGACTTGTGAAAGAT+GGG | - | 32442:15669-15688 | MS.gene060940:intron | 40.0% | |
| GACTAACGAAGTTTGCATTC+AGG | - | 32442:15337-15356 | MS.gene060940:intron | 40.0% | |
| GAGTGAAATACCCCATTTGT+TGG | + | 32442:14829-14848 | None:intergenic | 40.0% | |
| GATGTGGAAGTTATATTGGG+AGG | - | 32442:14759-14778 | MS.gene060940:CDS | 40.0% | |
| GGAAGTTATATTGGGAGGTA+TGG | - | 32442:14764-14783 | MS.gene060940:CDS | 40.0% | |
| GTCAATTTAAACAGGCCTAC+CGG | + | 32442:15004-15023 | None:intergenic | 40.0% | |
| TCACAAGTCTCCTTCAATTC+TGG | + | 32442:15664-15683 | None:intergenic | 40.0% | |
| TCACGGATGGAGAGAATAAA+AGG | + | 32442:14541-14560 | None:intergenic | 40.0% | |
| TGAAGGAGACTTGTGAAAGA+TGG | - | 32442:15668-15687 | MS.gene060940:intron | 40.0% | |
| TGAGCATGTATTGTTGTGAC+AGG | - | 32442:15515-15534 | MS.gene060940:CDS | 40.0% | |
| TTTATTCTCTCCATCCGTGA+TGG | - | 32442:14541-14560 | MS.gene060940:CDS | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | + | 32442:15477-15496 | None:intergenic | 40.0% |
| ! | ATCAGATGACAGTGATGATG+TGG | - | 32442:14743-14762 | MS.gene060940:CDS | 40.0% |
| ! | GTTTTTGCTAGTATACCGGT+AGG | - | 32442:14986-15005 | MS.gene060940:intron | 40.0% |
| ! | TCAAGATGTGGATTATACCG+TGG | - | 32442:15558-15577 | MS.gene060940:CDS | 40.0% |
| ! | TGCATTTTGGGCAATTGAAG+TGG | - | 32442:15588-15607 | MS.gene060940:CDS | 40.0% |
| !! | ACTTACGAGCCATGTTTTGA+AGG | + | 32442:14584-14603 | None:intergenic | 40.0% |
| !! | TGTGCTGATTAAAGCTTGCA+AGG | - | 32442:14719-14738 | MS.gene060940:CDS | 40.0% |
| ACTTTAGTCCCTGAATCGGA+AGG | + | 32442:15473-15492 | None:intergenic | 45.0% | |
| AGTCAATCAACGCTTGCAGA+AGG | - | 32442:15735-15754 | MS.gene060940:intron | 45.0% | |
| ATTGCAAAACAGTCCCTGCA+TGG | - | 32442:15294-15313 | MS.gene060940:intron | 45.0% | |
| CAAGTCTCCTTCAATTCTGG+TGG | + | 32442:15661-15680 | None:intergenic | 45.0% | |
| CCAAAATGCAGTAAGAGCCA+CGG | + | 32442:15578-15597 | None:intergenic | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | + | 32442:15472-15491 | None:intergenic | 45.0% | |
| GACGAATCATCTCCCATTCA+GGG | + | 32442:15250-15269 | None:intergenic | 45.0% | |
| GTATTGTTGTGACAGGTTGC+TGG | - | 32442:15522-15541 | MS.gene060940:CDS | 45.0% | |
| GTGAAAGATGGGGCAATGAA+GGG | - | 32442:15680-15699 | MS.gene060940:intron | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | 32442:15310-15329 | None:intergenic | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | 32442:15306-15325 | MS.gene060940:intron | 45.0% | |
| TGACGAATCATCTCCCATTC+AGG | + | 32442:15251-15270 | None:intergenic | 45.0% | |
| TGTGAAAGATGGGGCAATGA+AGG | - | 32442:15679-15698 | MS.gene060940:intron | 45.0% | |
| ! | CGTGGCTCTTACTGCATTTT+GGG | - | 32442:15576-15595 | MS.gene060940:CDS | 45.0% |
| !! | CATTTCTGGAATATGAGCCG+TGG | - | 32442:15820-15839 | MS.gene060940:CDS | 45.0% |
| !! | GGAGAGAATAAAAGGGTGTC+TGG | + | 32442:14533-14552 | None:intergenic | 45.0% |
| AGATGGGGCAATGAAGGGTT+TGG | - | 32442:15685-15704 | MS.gene060940:intron | 50.0% | |
| GACGAATCCCTTCCGATTCA+GGG | - | 32442:15462-15481 | MS.gene060940:CDS | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | 32442:15311-15330 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | 32442:15305-15324 | MS.gene060940:intron | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | - | 32442:15461-15480 | MS.gene060940:CDS | 50.0% | |
| TTGCTGCGTCGTAGATAGGA+CGG | + | 32442:14510-14529 | None:intergenic | 50.0% | |
| ! | CCGTGGCTCTTACTGCATTT+TGG | - | 32442:15575-15594 | MS.gene060940:CDS | 50.0% |
| !! | GAGATTGAACGGTGCCATCA+CGG | + | 32442:14558-14577 | None:intergenic | 50.0% |
| CTGGTTGCTGCGTCGTAGAT+AGG | + | 32442:14514-14533 | None:intergenic | 55.0% | |
| ! | GGGAGGTATGGCTTCTCTCA+AGG | - | 32442:14776-14795 | MS.gene060940:CDS | 55.0% |
| !! | TTGAACGGTGCCATCACGGA+TGG | + | 32442:14554-14573 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32442 | gene | 14481 | 15852 | 14481 | ID=MS.gene060940 |
| 32442 | mRNA | 14481 | 15852 | 14481 | ID=MS.gene060940.t1;Parent=MS.gene060940 |
| 32442 | exon | 15736 | 15852 | 15736 | ID=MS.gene060940.t1.exon1;Parent=MS.gene060940.t1 |
| 32442 | CDS | 15736 | 15852 | 15736 | ID=cds.MS.gene060940.t1;Parent=MS.gene060940.t1 |
| 32442 | exon | 15444 | 15661 | 15444 | ID=MS.gene060940.t1.exon2;Parent=MS.gene060940.t1 |
| 32442 | CDS | 15444 | 15661 | 15444 | ID=cds.MS.gene060940.t1;Parent=MS.gene060940.t1 |
| 32442 | exon | 14481 | 14796 | 14481 | ID=MS.gene060940.t1.exon3;Parent=MS.gene060940.t1 |
| 32442 | CDS | 14481 | 14796 | 14481 | ID=cds.MS.gene060940.t1;Parent=MS.gene060940.t1 |
| Gene Sequence |
| Protein sequence |
