Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066387.t1 | XP_003613950.2 | 96.4 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 1.80E-180 | 641.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066387.t1 | F4I241 | 53.4 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 4.3e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066387.t1 | G7JWN6 | 96.4 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 1.3e-180 | 641.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene066387 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene066387 | 0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene066387 | 0.831799 | 1.36E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene066387 | 0.826246 | 3.01E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene066387 | 0.809275 | 2.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90774 | MS.gene066387 | PPI |
| MS.gene048337 | MS.gene066387 | PPI |
| MS.gene046944 | MS.gene066387 | PPI |
| MS.gene008905 | MS.gene066387 | PPI |
| MS.gene024963 | MS.gene066387 | PPI |
| MS.gene92360 | MS.gene066387 | PPI |
| MS.gene066387 | MS.gene046944 | PPI |
| MS.gene066387 | MS.gene40528 | PPI |
| MS.gene066387 | MS.gene065201 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066387.t1 | MTR_5g043000 | 96.407 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 0.0 | 662 |
| MS.gene066387.t1 | MTR_5g005120 | 37.037 | 324 | 196 | 5 | 8 | 325 | 11 | 332 | 7.50e-69 | 219 |
| MS.gene066387.t1 | MTR_7g033060 | 86.765 | 68 | 9 | 0 | 12 | 79 | 25 | 92 | 1.74e-32 | 116 |
| MS.gene066387.t1 | MTR_2g008410 | 27.217 | 327 | 210 | 12 | 9 | 318 | 17 | 332 | 3.92e-30 | 117 |
| MS.gene066387.t1 | MTR_8g068875 | 26.959 | 319 | 218 | 7 | 2 | 312 | 8 | 319 | 5.96e-30 | 117 |
| MS.gene066387.t1 | MTR_2g008410 | 26.087 | 322 | 202 | 10 | 9 | 318 | 17 | 314 | 1.60e-26 | 107 |
| MS.gene066387.t1 | MTR_1g492860 | 25.664 | 339 | 233 | 8 | 8 | 334 | 12 | 343 | 3.37e-26 | 107 |
| MS.gene066387.t1 | MTR_2g008410 | 27.481 | 262 | 169 | 10 | 67 | 318 | 17 | 267 | 3.29e-22 | 94.7 |
| MS.gene066387.t1 | MTR_2g008410 | 26.070 | 257 | 161 | 8 | 67 | 318 | 17 | 249 | 1.26e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066387.t1 | AT1G69400 | 53.443 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 8.19e-117 | 340 |
| MS.gene066387.t1 | AT1G69400 | 49.569 | 232 | 116 | 1 | 16 | 247 | 11 | 241 | 1.20e-75 | 234 |
| MS.gene066387.t1 | AT1G49910 | 37.695 | 321 | 192 | 5 | 11 | 325 | 9 | 327 | 1.77e-73 | 231 |
| MS.gene066387.t1 | AT3G19590 | 37.730 | 326 | 195 | 6 | 6 | 325 | 5 | 328 | 9.34e-72 | 226 |
| MS.gene066387.t1 | AT1G80670 | 27.134 | 328 | 220 | 9 | 3 | 318 | 10 | 330 | 3.81e-31 | 120 |
Find 70 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGACCATCCTTTGATTT+TGG | 0.181469 | 5.1:+32554615 | None:intergenic |
| GCAGGTCTGTTAATTACTTC+TGG | 0.226200 | 5.1:-32556227 | MS.gene066387:intron |
| AATCAACAATTTCTTTGATT+TGG | 0.234591 | 5.1:+32558918 | None:intergenic |
| GAATCTTCGTTTATACGATT+TGG | 0.245023 | 5.1:-32558726 | MS.gene066387:CDS |
| GGATGGACGGGTTGCGTTGC+AGG | 0.250415 | 5.1:-32555363 | MS.gene066387:CDS |
| TATAGGTATGACTTGCATTC+TGG | 0.273951 | 5.1:-32557320 | MS.gene066387:intron |
| CATGTCTGTCTCGGGGTTTA+AGG | 0.290281 | 5.1:-32556120 | MS.gene066387:CDS |
| ATTCGGTGCAAATTGAATTC+TGG | 0.294536 | 5.1:+32558876 | None:intergenic |
| CTGGAAATTGCGTCATTGAT+TGG | 0.299551 | 5.1:+32558895 | None:intergenic |
| CAAGGCTCCATTGACAGGTT+TGG | 0.364972 | 5.1:+32556041 | None:intergenic |
| ATAATTTCTATTAGTATGTC+TGG | 0.377820 | 5.1:-32554484 | MS.gene066387:intron |
| ACAACCTTCTCATTTCATCT+TGG | 0.384200 | 5.1:-32558849 | MS.gene066387:CDS |
| ATCCTTGTCTTACAACCATT+CGG | 0.387136 | 5.1:-32554247 | MS.gene066387:CDS |
| ATGAGAAGGTTGTTAGAATT+CGG | 0.387365 | 5.1:+32558859 | None:intergenic |
| CAACCTTCTCATTTCATCTT+GGG | 0.388828 | 5.1:-32558848 | MS.gene066387:CDS |
| GCTTTCTCTGTTGCTTCTGA+TGG | 0.394841 | 5.1:-32558626 | MS.gene066387:CDS |
| GATGACATGGCAACATGTAT+TGG | 0.408681 | 5.1:-32557272 | MS.gene066387:CDS |
| AAGTAACTTACATGTTTCAT+TGG | 0.411144 | 5.1:+32557244 | None:intergenic |
| ACGAAGGTTATGCTACCATA+TGG | 0.423142 | 5.1:-32554441 | MS.gene066387:CDS |
| TCCTTGTCTTACAACCATTC+GGG | 0.424268 | 5.1:-32554246 | MS.gene066387:CDS |
| AAAGGATGGTCAGCATCATT+TGG | 0.429051 | 5.1:-32554607 | MS.gene066387:CDS |
| CATTGCAAGGCTCCATTGAC+AGG | 0.429640 | 5.1:+32556036 | None:intergenic |
| ATTGACTCCATGTCTGTCTC+GGG | 0.434117 | 5.1:-32556128 | MS.gene066387:CDS |
| TCTGGAATTGTTGACTCAAT+GGG | 0.452206 | 5.1:-32557302 | MS.gene066387:CDS |
| CATCAAATTCGAATGACATT+GGG | 0.454646 | 5.1:-32555331 | MS.gene066387:intron |
| CCTACTTCTAGCATCCCATA+TGG | 0.464155 | 5.1:+32554426 | None:intergenic |
| TCAAGTGTTTATACATAAAG+TGG | 0.465769 | 5.1:-32554069 | MS.gene066387:CDS |
| TTTCTCAATTTCAGTTTCCC+AGG | 0.466397 | 5.1:-32554287 | MS.gene066387:intron |
| CAGTTGGATCAGTGGATGGA+CGG | 0.467705 | 5.1:-32555376 | MS.gene066387:CDS |
| TTGACAAGAAGTTATTATCA+TGG | 0.470217 | 5.1:-32556202 | MS.gene066387:CDS |
| CTTCTGATGGATTCATTCGA+AGG | 0.471299 | 5.1:-32558613 | MS.gene066387:intron |
| TGCAACACTATTTGAGTACC+TGG | 0.472971 | 5.1:+32554269 | None:intergenic |
| TTTAAGGTTACTGTAGGCAT+TGG | 0.475663 | 5.1:-32556104 | MS.gene066387:CDS |
| CGACAAACCAAACCTGTCAA+TGG | 0.476431 | 5.1:-32556048 | MS.gene066387:CDS |
| TTCTGGAATTGTTGACTCAA+TGG | 0.476624 | 5.1:-32557303 | MS.gene066387:CDS |
| GATTGACTCCATGTCTGTCT+CGG | 0.477649 | 5.1:-32556129 | MS.gene066387:CDS |
| TCATCAAATTCGAATGACAT+TGG | 0.478333 | 5.1:-32555332 | MS.gene066387:CDS |
| TGGTACATACCTTCTGCATA+AGG | 0.481320 | 5.1:+32555984 | None:intergenic |
| AAAGTGGACAACATTGATAT+CGG | 0.487576 | 5.1:-32554053 | MS.gene066387:CDS |
| TTTCTTGCAGGATTTGCAGT+TGG | 0.488184 | 5.1:-32555392 | MS.gene066387:intron |
| TGACAAGAAGTTATTATCAT+GGG | 0.507588 | 5.1:-32556201 | MS.gene066387:CDS |
| ATGTCTGGTGCATTTGTCAC+TGG | 0.544544 | 5.1:-32554469 | MS.gene066387:CDS |
| TCGGGGTTTAAGGTTACTGT+AGG | 0.551548 | 5.1:-32556110 | MS.gene066387:CDS |
| AGTTCAATTCCTTATGCAGA+AGG | 0.553343 | 5.1:-32555993 | MS.gene066387:intron |
| AAGTAGGAAAAGACTAATTG+AGG | 0.554607 | 5.1:-32554410 | MS.gene066387:intron |
| CGAAGGTTATGCTACCATAT+GGG | 0.555039 | 5.1:-32554440 | MS.gene066387:CDS |
| CTTAATTGTGTACCATTGCA+AGG | 0.556384 | 5.1:+32556023 | None:intergenic |
| ATACGATTTGGACGCTTCTG+TGG | 0.562700 | 5.1:-32558714 | MS.gene066387:CDS |
| CCATATGGGATGCTAGAAGT+AGG | 0.571549 | 5.1:-32554426 | MS.gene066387:CDS |
| TCTTGATTGTTGTTTCTCTG+AGG | 0.576939 | 5.1:-32558660 | MS.gene066387:CDS |
| ACTCTGACAGATATACGTTC+CGG | 0.578341 | 5.1:-32554644 | MS.gene066387:intron |
| TTTGCAGTTGGATCAGTGGA+TGG | 0.578867 | 5.1:-32555380 | MS.gene066387:CDS |
| CCGGTGTCATCCAAAATCAA+AGG | 0.586288 | 5.1:-32554625 | MS.gene066387:CDS |
| TCCCGAATGGTTGTAAGACA+AGG | 0.598890 | 5.1:+32554245 | None:intergenic |
| CTTAAACCCCGAGACAGACA+TGG | 0.605467 | 5.1:+32556121 | None:intergenic |
| CAGCTAGAAGCTGTCCCGAA+TGG | 0.610239 | 5.1:+32554232 | None:intergenic |
| AGTTGGATCAGTGGATGGAC+GGG | 0.611964 | 5.1:-32555375 | MS.gene066387:CDS |
| TTGACTCCATGTCTGTCTCG+GGG | 0.612513 | 5.1:-32556127 | MS.gene066387:CDS |
| CTGTCAATGGAGCCTTGCAA+TGG | 0.616655 | 5.1:-32556035 | MS.gene066387:CDS |
| AATGGGTAGTCACGATGACA+TGG | 0.618721 | 5.1:-32557285 | MS.gene066387:CDS |
| TCGGATCAAGTTCTGCTCGA+AGG | 0.619168 | 5.1:-32554034 | MS.gene066387:CDS |
| ACTTTATGTATAAACACTTG+AGG | 0.625298 | 5.1:+32554071 | None:intergenic |
| TGTCATCCAAAATCAAAGGA+TGG | 0.627782 | 5.1:-32554621 | MS.gene066387:CDS |
| TTATGTATAAACACTTGAGG+AGG | 0.628759 | 5.1:+32554074 | None:intergenic |
| AGTTGCGTAAATCATAAACA+TGG | 0.628890 | 5.1:+32556072 | None:intergenic |
| AGGATTTGCAGTTGGATCAG+TGG | 0.634576 | 5.1:-32555384 | MS.gene066387:CDS |
| TGTCCCAAGATGAAATGAGA+AGG | 0.640689 | 5.1:+32558845 | None:intergenic |
| TTTGTCACTGGTGATAACGA+AGG | 0.671951 | 5.1:-32554457 | MS.gene066387:CDS |
| GCAACACTATTTGAGTACCT+GGG | 0.674620 | 5.1:+32554270 | None:intergenic |
| AGAAGCAACAGAGAAAGCAA+CGG | 0.681074 | 5.1:+32558631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTATAATAATTTAAA+TGG | + | chr5.1:32558439-32558458 | None:intergenic | 0.0% |
| !! | TTGTTAATAATTCTAAATTA+TGG | - | chr5.1:32557932-32557951 | MS.gene066387:intron | 10.0% |
| !! | AAATTGAGAAAAAAAAAAGA+TGG | + | chr5.1:32558669-32558688 | None:intergenic | 15.0% |
| !! | AATATACTACATTTATGATA+TGG | + | chr5.1:32556511-32556530 | None:intergenic | 15.0% |
| !! | ATATTTAAGTGATCTATTAT+TGG | - | chr5.1:32556028-32556047 | MS.gene066387:CDS | 15.0% |
| !! | ATCTATGTTAATTTAAATTG+AGG | - | chr5.1:32554478-32554497 | MS.gene066387:intron | 15.0% |
| !! | ATGATTAATAAATTCTGAAT+AGG | - | chr5.1:32556419-32556438 | MS.gene066387:intron | 15.0% |
| !! | CTATATTATATGGTAAAAAA+TGG | + | chr5.1:32555254-32555273 | None:intergenic | 15.0% |
| !! | TAACAATATAAAAAACATGT+TGG | - | chr5.1:32554617-32554636 | MS.gene066387:CDS | 15.0% |
| !! | TATTCATGAAAATTGAAAAA+TGG | + | chr5.1:32556244-32556263 | None:intergenic | 15.0% |
| !! | TCTATGTTAATTTAAATTGA+GGG | - | chr5.1:32554479-32554498 | MS.gene066387:intron | 15.0% |
| !! | TGATTAATAAATTCTGAATA+GGG | - | chr5.1:32556420-32556439 | MS.gene066387:intron | 15.0% |
| !! | TTTGTTAATATGATATTGAA+AGG | - | chr5.1:32556122-32556141 | MS.gene066387:CDS | 15.0% |
| !!! | ATACTTTTAAGAATATGATT+TGG | + | chr5.1:32556613-32556632 | None:intergenic | 15.0% |
| !!! | ATTTTCAAATTTGAGTTTAA+AGG | - | chr5.1:32555173-32555192 | MS.gene066387:intron | 15.0% |
| !!! | TGAATCAAAATATTTTATGT+TGG | - | chr5.1:32558242-32558261 | MS.gene066387:intron | 15.0% |
| !! | AAATGGAACAAATAAAAACA+AGG | + | chr5.1:32555761-32555780 | None:intergenic | 20.0% |
| !! | AAATTACTAATAAATGCAAC+TGG | + | chr5.1:32558050-32558069 | None:intergenic | 20.0% |
| !! | AATAAAAATTGTTTGGATGT+TGG | - | chr5.1:32556638-32556657 | MS.gene066387:intron | 20.0% |
| !! | AATCAACAATTTCTTTGATT+TGG | + | chr5.1:32554050-32554069 | None:intergenic | 20.0% |
| !! | AATTTGAAAAAAATGCTGTT+AGG | + | chr5.1:32554979-32554998 | None:intergenic | 20.0% |
| !! | ATAAAATAAGACAGATTTGA+TGG | + | chr5.1:32557004-32557023 | None:intergenic | 20.0% |
| !! | ATAATTTCTATTAGTATGTC+TGG | - | chr5.1:32558481-32558500 | MS.gene066387:intron | 20.0% |
| !! | ATCATAATATGAACTTTACA+GGG | + | chr5.1:32556708-32556727 | None:intergenic | 20.0% |
| !! | ATGATATTGAAAGGATATAT+TGG | - | chr5.1:32556131-32556150 | MS.gene066387:CDS | 20.0% |
| !! | ATGTAATGTATAATTACAAC+TGG | + | chr5.1:32556564-32556583 | None:intergenic | 20.0% |
| !! | ATTCTTCTAACAAAAAAGTA+TGG | - | chr5.1:32557207-32557226 | MS.gene066387:intron | 20.0% |
| !! | ATTTGAAAAAAATGCTGTTA+GGG | + | chr5.1:32554978-32554997 | None:intergenic | 20.0% |
| !! | CTTATAAGAGCTATATTATA+TGG | + | chr5.1:32555264-32555283 | None:intergenic | 20.0% |
| !! | GTATGCCTAATAATTATATT+AGG | + | chr5.1:32558023-32558042 | None:intergenic | 20.0% |
| !! | TGTAAAATAGTCATTAATGT+CGG | + | chr5.1:32554525-32554544 | None:intergenic | 20.0% |
| !!! | AAAACAAATTTAGTTTTGAG+AGG | + | chr5.1:32558217-32558236 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGTTAGAAGAATA+GGG | + | chr5.1:32557206-32557225 | None:intergenic | 20.0% |
| !!! | ATAATGCACCTAATTTTTTT+GGG | + | chr5.1:32557709-32557728 | None:intergenic | 20.0% |
| !!! | TACTTTTTTGTTAGAAGAAT+AGG | + | chr5.1:32557207-32557226 | None:intergenic | 20.0% |
| !!! | TATAATGCACCTAATTTTTT+TGG | + | chr5.1:32557710-32557729 | None:intergenic | 20.0% |
| !!! | TATCTTATTTTTAGTTGCTT+GGG | - | chr5.1:32557451-32557470 | MS.gene066387:intron | 20.0% |
| !!! | TTATCTTATTTTTAGTTGCT+TGG | - | chr5.1:32557450-32557469 | MS.gene066387:intron | 20.0% |
| !!! | TTATTTTATTTTGTCAACCT+TGG | - | chr5.1:32557015-32557034 | MS.gene066387:intron | 20.0% |
| !!! | TTTTTATTTGTTCCATTTGT+TGG | - | chr5.1:32555763-32555782 | MS.gene066387:intron | 20.0% |
| ! | AACTAAACACAAATGAAACA+TGG | + | chr5.1:32558591-32558610 | None:intergenic | 25.0% |
| ! | AAGTAACTTACATGTTTCAT+TGG | + | chr5.1:32555724-32555743 | None:intergenic | 25.0% |
| ! | AATCATTAGAGAGAATGTTA+GGG | - | chr5.1:32555824-32555843 | MS.gene066387:intron | 25.0% |
| ! | ACTTTATGTATAAACACTTG+AGG | + | chr5.1:32558897-32558916 | None:intergenic | 25.0% |
| ! | ATATAAAACACTCTTGCATA+TGG | - | chr5.1:32557242-32557261 | MS.gene066387:intron | 25.0% |
| ! | ATTAAGACTGTGTAAGAAAT+TGG | + | chr5.1:32555029-32555048 | None:intergenic | 25.0% |
| ! | ATTTCTTACACAGTCTTAAT+CGG | - | chr5.1:32555029-32555048 | MS.gene066387:intron | 25.0% |
| ! | CCTATTCTTAACCTAATATT+GGG | - | chr5.1:32557128-32557147 | MS.gene066387:intron | 25.0% |
| ! | GAAAACTTTCTTAAACTTCA+TGG | + | chr5.1:32558830-32558849 | None:intergenic | 25.0% |
| ! | GATCATAATATGAACTTTAC+AGG | + | chr5.1:32556709-32556728 | None:intergenic | 25.0% |
| ! | GGAAAACCAAGAAAAAATAT+AGG | - | chr5.1:32555984-32556003 | MS.gene066387:intron | 25.0% |
| ! | GTTTAAATATCTGCATTCTA+AGG | - | chr5.1:32556327-32556346 | MS.gene066387:intron | 25.0% |
| ! | TACAGGGACATAATAAAATA+TGG | + | chr5.1:32556692-32556711 | None:intergenic | 25.0% |
| ! | TAGCAAATTATTAGAACATG+TGG | + | chr5.1:32558295-32558314 | None:intergenic | 25.0% |
| ! | TAGTCAAATGTTTATGCTAA+AGG | + | chr5.1:32556365-32556384 | None:intergenic | 25.0% |
| ! | TATTTAAACACAAAACACCA+AGG | + | chr5.1:32556316-32556335 | None:intergenic | 25.0% |
| ! | TCAAGTGTTTATACATAAAG+TGG | - | chr5.1:32558896-32558915 | MS.gene066387:CDS | 25.0% |
| ! | TGACAAGAAGTTATTATCAT+GGG | - | chr5.1:32556764-32556783 | MS.gene066387:intron | 25.0% |
| ! | TTAAATATGCATACGTGAAA+TGG | + | chr5.1:32557667-32557686 | None:intergenic | 25.0% |
| ! | TTGACAAGAAGTTATTATCA+TGG | - | chr5.1:32556763-32556782 | MS.gene066387:intron | 25.0% |
| !! | AACATGTTGCTATTAAGATT+TGG | - | chr5.1:32557038-32557057 | MS.gene066387:intron | 25.0% |
| !! | CTAATGAAATGACATTGATT+TGG | + | chr5.1:32554594-32554613 | None:intergenic | 25.0% |
| !! | TCTACAATTTTGTTAAACAG+CGG | - | chr5.1:32557837-32557856 | MS.gene066387:intron | 25.0% |
| !! | TGAAGTTTAAGAAAGTTTTC+TGG | - | chr5.1:32558830-32558849 | MS.gene066387:intron | 25.0% |
| !! | TTTTGAATTAGACTCTTAAC+AGG | + | chr5.1:32555101-32555120 | None:intergenic | 25.0% |
| !!! | ATGCTATTTGCATAGTTTTT+AGG | + | chr5.1:32557386-32557405 | None:intergenic | 25.0% |
| !!! | ATTGAATCGATTTTGTGTTT+TGG | - | chr5.1:32554209-32554228 | MS.gene066387:CDS | 25.0% |
| !!! | CTTTTTTGTTAGAAGAATAG+GGG | + | chr5.1:32557205-32557224 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGCTGAAAT+GGG | - | chr5.1:32554429-32554448 | MS.gene066387:CDS | 25.0% |
| !!! | TGACATTTATTTTGCTGAAA+TGG | - | chr5.1:32554428-32554447 | MS.gene066387:CDS | 25.0% |
| AAAACATGCATCATGATCAT+AGG | + | chr5.1:32555582-32555601 | None:intergenic | 30.0% | |
| AAACACAAATGAAACATGGT+AGG | + | chr5.1:32558587-32558606 | None:intergenic | 30.0% | |
| AAAGATCTTGTCAATCATGA+TGG | - | chr5.1:32555052-32555071 | MS.gene066387:intron | 30.0% | |
| AAAGTGGACAACATTGATAT+CGG | - | chr5.1:32558912-32558931 | MS.gene066387:CDS | 30.0% | |
| AAGTAGGAAAAGACTAATTG+AGG | - | chr5.1:32558555-32558574 | MS.gene066387:intron | 30.0% | |
| AATTCAATAACTAGCAGTAG+AGG | - | chr5.1:32555963-32555982 | MS.gene066387:intron | 30.0% | |
| ACAAATAAAAACAAGGAGCA+AGG | + | chr5.1:32555754-32555773 | None:intergenic | 30.0% | |
| AGTTGCGTAAATCATAAACA+TGG | + | chr5.1:32556896-32556915 | None:intergenic | 30.0% | |
| ATAAGAGTAGTAGGAAAGAT+AGG | + | chr5.1:32556186-32556205 | None:intergenic | 30.0% | |
| ATGAGAAGGTTGTTAGAATT+CGG | + | chr5.1:32554109-32554128 | None:intergenic | 30.0% | |
| ATTATGATCATGATTGTTGC+AGG | - | chr5.1:32556720-32556739 | MS.gene066387:intron | 30.0% | |
| ATTGTCCTTCATAGTTCATA+TGG | + | chr5.1:32555946-32555965 | None:intergenic | 30.0% | |
| CAATCATTAGAGAGAATGTT+AGG | - | chr5.1:32555823-32555842 | MS.gene066387:intron | 30.0% | |
| CATCAAATTCGAATGACATT+GGG | - | chr5.1:32557634-32557653 | MS.gene066387:intron | 30.0% | |
| CCCAATATTAGGTTAAGAAT+AGG | + | chr5.1:32557131-32557150 | None:intergenic | 30.0% | |
| CCTATAAATTTCAGCTTAAC+AGG | + | chr5.1:32555631-32555650 | None:intergenic | 30.0% | |
| CCTGTTAAGCTGAAATTTAT+AGG | - | chr5.1:32555628-32555647 | MS.gene066387:intron | 30.0% | |
| CTCTGTAAGGAACAAAATAA+AGG | + | chr5.1:32558866-32558885 | None:intergenic | 30.0% | |
| GAATCTCACTAAAAACATAG+GGG | - | chr5.1:32554639-32554658 | MS.gene066387:intron | 30.0% | |
| GAATCTTCGTTTATACGATT+TGG | - | chr5.1:32554239-32554258 | MS.gene066387:CDS | 30.0% | |
| GCCTATTCTTAACCTAATAT+TGG | - | chr5.1:32557127-32557146 | MS.gene066387:intron | 30.0% | |
| GGAATCTCACTAAAAACATA+GGG | - | chr5.1:32554638-32554657 | MS.gene066387:intron | 30.0% | |
| GGAGCACAAATGAAATAAAA+AGG | - | chr5.1:32556441-32556460 | MS.gene066387:intron | 30.0% | |
| GGGAATGACTAAATCTATTT+GGG | - | chr5.1:32554890-32554909 | MS.gene066387:intron | 30.0% | |
| GTAAGGAACAAAATAAAGGT+TGG | + | chr5.1:32558862-32558881 | None:intergenic | 30.0% | |
| GTTTAAAGGACATGCATTAT+CGG | - | chr5.1:32555187-32555206 | MS.gene066387:intron | 30.0% | |
| TACATTTATGATATGGCAAG+TGG | + | chr5.1:32556504-32556523 | None:intergenic | 30.0% | |
| TCATCAAATTCGAATGACAT+TGG | - | chr5.1:32557633-32557652 | MS.gene066387:intron | 30.0% | |
| TGATAAGATGAAACATACAG+TGG | + | chr5.1:32558410-32558429 | None:intergenic | 30.0% | |
| TGGAATCTCACTAAAAACAT+AGG | - | chr5.1:32554637-32554656 | MS.gene066387:CDS | 30.0% | |
| TGGGAATGACTAAATCTATT+TGG | - | chr5.1:32554889-32554908 | MS.gene066387:intron | 30.0% | |
| TTAAATATCCCACGTAGTAT+CGG | + | chr5.1:32557481-32557500 | None:intergenic | 30.0% | |
| TTATGTATAAACACTTGAGG+AGG | + | chr5.1:32558894-32558913 | None:intergenic | 30.0% | |
| TTTCAAATGCACAACATACA+AGG | - | chr5.1:32557884-32557903 | MS.gene066387:intron | 30.0% | |
| ! | ACATGGATTTTATCAATGCT+AGG | + | chr5.1:32555506-32555525 | None:intergenic | 30.0% |
| ! | AGACTTTGAAAAAGTTCTCA+AGG | + | chr5.1:32557431-32557450 | None:intergenic | 30.0% |
| ! | ATAGTAGAGTCTTGTCTTAA+AGG | - | chr5.1:32555867-32555886 | MS.gene066387:intron | 30.0% |
| ! | TAGTAGAGTCTTGTCTTAAA+GGG | - | chr5.1:32555868-32555887 | MS.gene066387:intron | 30.0% |
| ! | TGTGTAAACTATCTTTTGAC+TGG | - | chr5.1:32555424-32555443 | MS.gene066387:intron | 30.0% |
| !! | AGCATTGATAAAATCCATGT+TGG | - | chr5.1:32555506-32555525 | MS.gene066387:intron | 30.0% |
| !! | CTATTATTGGTCTTGATTTG+TGG | - | chr5.1:32556041-32556060 | MS.gene066387:CDS | 30.0% |
| !! | GCATTTTGGTCATTTACTTT+GGG | - | chr5.1:32554870-32554889 | MS.gene066387:intron | 30.0% |
| !! | GCATTTTGGTCATTTACTTT+GGG | + | chr5.1:32554889-32554870 | None:intergenic | 30.0% |
| !! | TCTTTAGAATTGAGAGTTCA+GGG | + | chr5.1:32557107-32557126 | None:intergenic | 30.0% |
| !! | TTAAGCTTTGTTATGATCCT+TGG | - | chr5.1:32556296-32556315 | MS.gene066387:intron | 30.0% |
| !!! | ACCTAATTTTTTTGGGAAGA+GGG | + | chr5.1:32557702-32557721 | None:intergenic | 30.0% |
| !!! | ATTGTTTGGATGTTGGTTTT+AGG | - | chr5.1:32556645-32556664 | MS.gene066387:intron | 30.0% |
| !!! | GCTTGACCTATATTTTTTCT+TGG | + | chr5.1:32555993-32556012 | None:intergenic | 30.0% |
| !!! | GTTTTTAGGATGTAGTTAAC+TGG | + | chr5.1:32557372-32557391 | None:intergenic | 30.0% |
| !!! | TTCTAGAGTGATTTTGAACT+CGG | - | chr5.1:32554549-32554568 | MS.gene066387:intron | 30.0% |
| AAGATAATTCCTTCTCTGCA+TGG | - | chr5.1:32556212-32556231 | MS.gene066387:CDS | 35.0% | |
| ACAACAGGAAAAAGGGAAAA+AGG | + | chr5.1:32557742-32557761 | None:intergenic | 35.0% | |
| ACAACCTTCTCATTTCATCT+TGG | - | chr5.1:32554116-32554135 | MS.gene066387:intron | 35.0% | |
| ACAAGATGGAGTATGATACA+TGG | + | chr5.1:32555463-32555482 | None:intergenic | 35.0% | |
| ACTAATAAATGCAACTGGCT+AGG | + | chr5.1:32558045-32558064 | None:intergenic | 35.0% | |
| AGAGAAGGAATTATCTTGTG+TGG | + | chr5.1:32556209-32556228 | None:intergenic | 35.0% | |
| AGTTCAATTCCTTATGCAGA+AGG | - | chr5.1:32556972-32556991 | MS.gene066387:intron | 35.0% | |
| ATCCTTGTCTTACAACCATT+CGG | - | chr5.1:32558718-32558737 | MS.gene066387:CDS | 35.0% | |
| ATGGATTTCTAAGCTTCACA+AGG | - | chr5.1:32557158-32557177 | MS.gene066387:intron | 35.0% | |
| CAAACAACAACTCAACAAGA+TGG | + | chr5.1:32555477-32555496 | None:intergenic | 35.0% | |
| CAACCTTCTCATTTCATCTT+GGG | - | chr5.1:32554117-32554136 | MS.gene066387:intron | 35.0% | |
| CTTAATAGCAACATGTTCCA+AGG | + | chr5.1:32557035-32557054 | None:intergenic | 35.0% | |
| CTTAATTGTGTACCATTGCA+AGG | + | chr5.1:32556945-32556964 | None:intergenic | 35.0% | |
| GAATGAGCAAATCCATTTCT+TGG | + | chr5.1:32554722-32554741 | None:intergenic | 35.0% | |
| GACTTATAAACCATATGCTC+TGG | - | chr5.1:32557995-32558014 | MS.gene066387:intron | 35.0% | |
| GTAGACCATATGAACTATGA+AGG | - | chr5.1:32555938-32555957 | MS.gene066387:intron | 35.0% | |
| TAAAACACTCTTGCATATGG+AGG | - | chr5.1:32557245-32557264 | MS.gene066387:intron | 35.0% | |
| TAAATATCCCACGTAGTATC+GGG | + | chr5.1:32557480-32557499 | None:intergenic | 35.0% | |
| TAATTCAAAATCCAACCCTG+CGG | - | chr5.1:32555111-32555130 | MS.gene066387:intron | 35.0% | |
| TCCCTCTTCCCAAAAAAATT+AGG | - | chr5.1:32557698-32557717 | MS.gene066387:intron | 35.0% | |
| TGTAAGAGAAAATCAGCCTA+GGG | + | chr5.1:32558121-32558140 | None:intergenic | 35.0% | |
| TGTCATCCAAAATCAAAGGA+TGG | - | chr5.1:32558344-32558363 | MS.gene066387:intron | 35.0% | |
| TTGACTACTTCTCAAGCTTT+GGG | - | chr5.1:32556378-32556397 | MS.gene066387:intron | 35.0% | |
| TTGTAAGAGAAAATCAGCCT+AGG | + | chr5.1:32558122-32558141 | None:intergenic | 35.0% | |
| TTTCTCAATTTCAGTTTCCC+AGG | - | chr5.1:32558678-32558697 | MS.gene066387:CDS | 35.0% | |
| TTTGACTACTTCTCAAGCTT+TGG | - | chr5.1:32556377-32556396 | MS.gene066387:intron | 35.0% | |
| ! | AAGTGAGCAAGTTCTTTTGT+GGG | + | chr5.1:32557767-32557786 | None:intergenic | 35.0% |
| ! | AATCCATGTTGGTCTATATG+TGG | - | chr5.1:32555517-32555536 | MS.gene066387:intron | 35.0% |
| ! | AATGGGCAATTTTCGTTGAA+AGG | - | chr5.1:32554446-32554465 | MS.gene066387:CDS | 35.0% |
| ! | AGTAGAGTCTTGTCTTAAAG+GGG | - | chr5.1:32555869-32555888 | MS.gene066387:intron | 35.0% |
| ! | ATGGATTAAAGACACGAGAA+AGG | - | chr5.1:32557951-32557970 | MS.gene066387:intron | 35.0% |
| ! | ATGGGCAATTTTCGTTGAAA+GGG | - | chr5.1:32554447-32554466 | MS.gene066387:CDS | 35.0% |
| ! | CTCACATTTCTTTTGCTTCT+TGG | + | chr5.1:32558778-32558797 | None:intergenic | 35.0% |
| ! | CTTTGAAAAAGTTCTCAAGG+TGG | + | chr5.1:32557428-32557447 | None:intergenic | 35.0% |
| ! | GGCAAATGAAAGGTATATCA+AGG | - | chr5.1:32556666-32556685 | MS.gene066387:intron | 35.0% |
| ! | GGGTTAAGGGTTAAGTTTTT+GGG | + | chr5.1:32554682-32554701 | None:intergenic | 35.0% |
| ! | TATAGGTATGACTTGCATTC+TGG | - | chr5.1:32555645-32555664 | MS.gene066387:intron | 35.0% |
| ! | TCTAAGTCTGATTTTCTTGC+AGG | - | chr5.1:32557561-32557580 | MS.gene066387:intron | 35.0% |
| ! | TGTTCCATTTGTTGGATGAA+TGG | - | chr5.1:32555771-32555790 | MS.gene066387:intron | 35.0% |
| ! | TTTAAGGTTACTGTAGGCAT+TGG | - | chr5.1:32556861-32556880 | MS.gene066387:intron | 35.0% |
| !! | ATTCGGTGCAAATTGAATTC+TGG | + | chr5.1:32554092-32554111 | None:intergenic | 35.0% |
| !! | CTCTTTAGAATTGAGAGTTC+AGG | + | chr5.1:32557108-32557127 | None:intergenic | 35.0% |
| !! | GGCATTTTGGTCATTTACTT+TGG | - | chr5.1:32554869-32554888 | MS.gene066387:intron | 35.0% |
| !! | GGCATTTTGGTCATTTACTT+TGG | + | chr5.1:32554888-32554869 | None:intergenic | 35.0% |
| !! | TATTGGTCTTGATTTGTGGT+TGG | - | chr5.1:32556045-32556064 | MS.gene066387:CDS | 35.0% |
| !! | TCTGGAATTGTTGACTCAAT+GGG | - | chr5.1:32555663-32555682 | MS.gene066387:intron | 35.0% |
| !! | TCTTGATTGTTGTTTCTCTG+AGG | - | chr5.1:32554305-32554324 | MS.gene066387:intron | 35.0% |
| !! | TTCTGGAATTGTTGACTCAA+TGG | - | chr5.1:32555662-32555681 | MS.gene066387:intron | 35.0% |
| !!! | CACCTAATTTTTTTGGGAAG+AGG | + | chr5.1:32557703-32557722 | None:intergenic | 35.0% |
| !!! | CATTTTGCACGTGTTGTTTA+CGG | + | chr5.1:32555373-32555392 | None:intergenic | 35.0% |
| !!! | GTTGGTTTTAGGCAAATGAA+AGG | - | chr5.1:32556656-32556675 | MS.gene066387:intron | 35.0% |
| !!! | TGTGTTTCTTTTTTAGCCCT+AGG | - | chr5.1:32558102-32558121 | MS.gene066387:intron | 35.0% |
| AAAACTTAACCCTTAACCCC+AGG | - | chr5.1:32554683-32554702 | MS.gene066387:intron | 40.0% | |
| AAAGGATGGTCAGCATCATT+TGG | - | chr5.1:32558358-32558377 | MS.gene066387:intron | 40.0% | |
| ACGAAGGTTATGCTACCATA+TGG | - | chr5.1:32558524-32558543 | MS.gene066387:intron | 40.0% | |
| ACTCTGACAGATATACGTTC+CGG | - | chr5.1:32558321-32558340 | MS.gene066387:intron | 40.0% | |
| AGAAGCAACAGAGAAAGCAA+CGG | + | chr5.1:32554337-32554356 | None:intergenic | 40.0% | |
| AGCCTTCAAAATCAGGCATT+TGG | - | chr5.1:32555541-32555560 | MS.gene066387:intron | 40.0% | |
| AGGAAAAAGGGAAAAAGGAG+AGG | + | chr5.1:32557737-32557756 | None:intergenic | 40.0% | |
| ATGTGGTAGCCTTCAAAATC+AGG | - | chr5.1:32555534-32555553 | MS.gene066387:intron | 40.0% | |
| CCATCTTGTAGCCCAATATT+AGG | + | chr5.1:32557142-32557161 | None:intergenic | 40.0% | |
| CCTAATATTGGGCTACAAGA+TGG | - | chr5.1:32557139-32557158 | MS.gene066387:intron | 40.0% | |
| CGAAGGTTATGCTACCATAT+GGG | - | chr5.1:32558525-32558544 | MS.gene066387:intron | 40.0% | |
| CTACCACATATAGACCAACA+TGG | + | chr5.1:32555523-32555542 | None:intergenic | 40.0% | |
| CTGGAAATTGCGTCATTGAT+TGG | + | chr5.1:32554073-32554092 | None:intergenic | 40.0% | |
| CTTGTGTGGATAAGAGTAGT+AGG | + | chr5.1:32556195-32556214 | None:intergenic | 40.0% | |
| GATCTTGTCAATCATGATGG+AGG | - | chr5.1:32555055-32555074 | MS.gene066387:intron | 40.0% | |
| GATGACATGGCAACATGTAT+TGG | - | chr5.1:32555693-32555712 | MS.gene066387:intron | 40.0% | |
| GCAACACTATTTGAGTACCT+GGG | + | chr5.1:32558698-32558717 | None:intergenic | 40.0% | |
| GCAGGTCTGTTAATTACTTC+TGG | - | chr5.1:32556738-32556757 | MS.gene066387:intron | 40.0% | |
| GTGTCCATTCATCCAACAAA+TGG | + | chr5.1:32555778-32555797 | None:intergenic | 40.0% | |
| TAACCCCAAAAACTAGCTGA+AGG | + | chr5.1:32557077-32557096 | None:intergenic | 40.0% | |
| TCCTTGTCTTACAACCATTC+GGG | - | chr5.1:32558719-32558738 | MS.gene066387:CDS | 40.0% | |
| TGCAACACTATTTGAGTACC+TGG | + | chr5.1:32558699-32558718 | None:intergenic | 40.0% | |
| TGGTACATACCTTCTGCATA+AGG | + | chr5.1:32556984-32557003 | None:intergenic | 40.0% | |
| TGTCCCAAGATGAAATGAGA+AGG | + | chr5.1:32554123-32554142 | None:intergenic | 40.0% | |
| TTTCTTGCAGGATTTGCAGT+TGG | - | chr5.1:32557573-32557592 | MS.gene066387:intron | 40.0% | |
| ! | AAACCAGTTTTACACTGACG+CGG | - | chr5.1:32555213-32555232 | MS.gene066387:intron | 40.0% |
| ! | AGCCAAATGCCTGATTTTGA+AGG | + | chr5.1:32555546-32555565 | None:intergenic | 40.0% |
| ! | CAAGTGAGCAAGTTCTTTTG+TGG | + | chr5.1:32557768-32557787 | None:intergenic | 40.0% |
| ! | GGGGTTAAGGGTTAAGTTTT+TGG | + | chr5.1:32554683-32554702 | None:intergenic | 40.0% |
| ! | TGGGCAATTTTCGTTGAAAG+GGG | - | chr5.1:32554448-32554467 | MS.gene066387:CDS | 40.0% |
| ! | TTGTCAATCATGATGGAGGA+CGG | - | chr5.1:32555059-32555078 | MS.gene066387:intron | 40.0% |
| ! | TTTGTCACTGGTGATAACGA+AGG | - | chr5.1:32558508-32558527 | MS.gene066387:intron | 40.0% |
| !! | CAAGGATCTTGTTGACTCAA+GGG | - | chr5.1:32557796-32557815 | MS.gene066387:intron | 40.0% |
| !! | CCTTTGATTTTGGATGACAC+CGG | + | chr5.1:32558343-32558362 | None:intergenic | 40.0% |
| !! | CTTCTGATGGATTCATTCGA+AGG | - | chr5.1:32554352-32554371 | MS.gene066387:intron | 40.0% |
| !! | GTCTTGATTTGTGGTTGGAT+AGG | - | chr5.1:32556050-32556069 | MS.gene066387:CDS | 40.0% |
| !! | TCAAGGATCTTGTTGACTCA+AGG | - | chr5.1:32557795-32557814 | MS.gene066387:intron | 40.0% |
| !! | TGCTGACCATCCTTTGATTT+TGG | + | chr5.1:32558353-32558372 | None:intergenic | 40.0% |
| AAAAACTAGCTGAAGGAGGG+AGG | + | chr5.1:32557070-32557089 | None:intergenic | 45.0% | |
| AAAACTAGCTGAAGGAGGGA+GGG | + | chr5.1:32557069-32557088 | None:intergenic | 45.0% | |
| AAATGCTGTTAGGGCTTGTG+AGG | + | chr5.1:32554969-32554988 | None:intergenic | 45.0% | |
| AAGTCTGAGTTCAGGGATTC+AGG | - | chr5.1:32557533-32557552 | MS.gene066387:intron | 45.0% | |
| AATGGGTAGTCACGATGACA+TGG | - | chr5.1:32555680-32555699 | MS.gene066387:intron | 45.0% | |
| ACACCAAGAAGTCTGAGTTC+AGG | - | chr5.1:32557525-32557544 | MS.gene066387:intron | 45.0% | |
| AGGAAAGATAGGAAGAGCAG+AGG | + | chr5.1:32556175-32556194 | None:intergenic | 45.0% | |
| AGGATTTGCAGTTGGATCAG+TGG | - | chr5.1:32557581-32557600 | MS.gene066387:intron | 45.0% | |
| ATAATGTGTACAACCTCCGC+AGG | + | chr5.1:32555130-32555149 | None:intergenic | 45.0% | |
| ATCCCTGAACTCAGACTTCT+TGG | + | chr5.1:32557531-32557550 | None:intergenic | 45.0% | |
| ATGTCTGGTGCATTTGTCAC+TGG | - | chr5.1:32558496-32558515 | MS.gene066387:intron | 45.0% | |
| CACCAAGAAGTCTGAGTTCA+GGG | - | chr5.1:32557526-32557545 | MS.gene066387:intron | 45.0% | |
| CCATATGGGATGCTAGAAGT+AGG | - | chr5.1:32558539-32558558 | MS.gene066387:intron | 45.0% | |
| CCATGCTTTGTGTGTGCAAT+AGG | + | chr5.1:32557910-32557929 | None:intergenic | 45.0% | |
| CCCAAAAACTAGCTGAAGGA+GGG | + | chr5.1:32557073-32557092 | None:intergenic | 45.0% | |
| CCTACTTCTAGCATCCCATA+TGG | + | chr5.1:32558542-32558561 | None:intergenic | 45.0% | |
| CCTATTGCACACACAAAGCA+TGG | - | chr5.1:32557907-32557926 | MS.gene066387:intron | 45.0% | |
| CGACAAACCAAACCTGTCAA+TGG | - | chr5.1:32556917-32556936 | MS.gene066387:intron | 45.0% | |
| GTGGGCAACAACAGGAAAAA+GGG | + | chr5.1:32557749-32557768 | None:intergenic | 45.0% | |
| TAATGTGTACAACCTCCGCA+GGG | + | chr5.1:32555129-32555148 | None:intergenic | 45.0% | |
| TAGAAGAATAGGGGTAGCAG+CGG | + | chr5.1:32557196-32557215 | None:intergenic | 45.0% | |
| TCCCGAATGGTTGTAAGACA+AGG | + | chr5.1:32558723-32558742 | None:intergenic | 45.0% | |
| TGGAAGAAACCATGCAGAGA+AGG | + | chr5.1:32556224-32556243 | None:intergenic | 45.0% | |
| TGTGGGCAACAACAGGAAAA+AGG | + | chr5.1:32557750-32557769 | None:intergenic | 45.0% | |
| TTTGCAGTTGGATCAGTGGA+TGG | - | chr5.1:32557585-32557604 | MS.gene066387:intron | 45.0% | |
| ! | AACCAGTTTTACACTGACGC+GGG | - | chr5.1:32555214-32555233 | MS.gene066387:intron | 45.0% |
| ! | ATACGATTTGGACGCTTCTG+TGG | - | chr5.1:32554251-32554270 | MS.gene066387:CDS | 45.0% |
| ! | ATTGACTCCATGTCTGTCTC+GGG | - | chr5.1:32556837-32556856 | MS.gene066387:intron | 45.0% |
| ! | GATTGACTCCATGTCTGTCT+CGG | - | chr5.1:32556836-32556855 | MS.gene066387:intron | 45.0% |
| ! | GCTTTCTCTGTTGCTTCTGA+TGG | - | chr5.1:32554339-32554358 | MS.gene066387:intron | 45.0% |
| ! | GTTCTTTTGTGGGCAACAAC+AGG | + | chr5.1:32557757-32557776 | None:intergenic | 45.0% |
| ! | TCGGGGTTTAAGGTTACTGT+AGG | - | chr5.1:32556855-32556874 | MS.gene066387:intron | 45.0% |
| !! | CCGGTGTCATCCAAAATCAA+AGG | - | chr5.1:32558340-32558359 | MS.gene066387:intron | 45.0% |
| !!! | CCCTCCTTCAGCTAGTTTTT+GGG | - | chr5.1:32557070-32557089 | MS.gene066387:intron | 45.0% |
| !!! | CCTCCTTCAGCTAGTTTTTG+GGG | - | chr5.1:32557071-32557090 | MS.gene066387:intron | 45.0% |
| !!! | TCCCTCCTTCAGCTAGTTTT+TGG | - | chr5.1:32557069-32557088 | MS.gene066387:intron | 45.0% |
| !!! | TTTTTTGGGAAGAGGGAGAG+AGG | + | chr5.1:32557695-32557714 | None:intergenic | 45.0% |
| !! | ATATAAAAATAAAAATTGTT+TGG | - | chr5.1:32556631-32556650 | MS.gene066387:intron | 5.0% |
| !! | TTATTATAAATTATAAAACT+TGG | - | chr5.1:32558445-32558464 | MS.gene066387:intron | 5.0% |
| AAACTAGCTGAAGGAGGGAG+GGG | + | chr5.1:32557068-32557087 | None:intergenic | 50.0% | |
| AGCGTGAGTTAACTCACGCA+GGG | + | chr5.1:32554767-32554786 | None:intergenic | 50.0% | |
| AGGAGTCAACTCCTGCTAGT+GGG | - | chr5.1:32556070-32556089 | MS.gene066387:CDS | 50.0% | |
| AGTTGGATCAGTGGATGGAC+GGG | - | chr5.1:32557590-32557609 | MS.gene066387:intron | 50.0% | |
| CAAGGCTCCATTGACAGGTT+TGG | + | chr5.1:32556927-32556946 | None:intergenic | 50.0% | |
| CAGTTGGATCAGTGGATGGA+CGG | - | chr5.1:32557589-32557608 | MS.gene066387:intron | 50.0% | |
| CATGTCTGTCTCGGGGTTTA+AGG | - | chr5.1:32556845-32556864 | MS.gene066387:intron | 50.0% | |
| CATTGCAAGGCTCCATTGAC+AGG | + | chr5.1:32556932-32556951 | None:intergenic | 50.0% | |
| CCCCAAAAACTAGCTGAAGG+AGG | + | chr5.1:32557074-32557093 | None:intergenic | 50.0% | |
| CCTGCTAGTGGGAAATGCTT+TGG | - | chr5.1:32556081-32556100 | MS.gene066387:CDS | 50.0% | |
| CGTGAGTTAACTCATGCTGC+GGG | - | chr5.1:32554830-32554849 | MS.gene066387:intron | 50.0% | |
| CTGTCAATGGAGCCTTGCAA+TGG | - | chr5.1:32556930-32556949 | MS.gene066387:intron | 50.0% | |
| CTTAAACCCCGAGACAGACA+TGG | + | chr5.1:32556847-32556866 | None:intergenic | 50.0% | |
| GCATGTTGTGGGCCAAGAAA+TGG | - | chr5.1:32554707-32554726 | MS.gene066387:intron | 50.0% | |
| GCGTGAGTTAACTCATGCTG+CGG | - | chr5.1:32554829-32554848 | MS.gene066387:intron | 50.0% | |
| TAGCGTGAGTTAACTCACGC+AGG | + | chr5.1:32554768-32554787 | None:intergenic | 50.0% | |
| TAGGAGTCAACTCCTGCTAG+TGG | - | chr5.1:32556069-32556088 | MS.gene066387:CDS | 50.0% | |
| TCGGATCAAGTTCTGCTCGA+AGG | - | chr5.1:32558931-32558950 | MS.gene066387:CDS | 50.0% | |
| TGAGGAGGCTCTACTCTGTA+AGG | + | chr5.1:32558879-32558898 | None:intergenic | 50.0% | |
| TGGGTTTCCCGATACTACGT+GGG | - | chr5.1:32557470-32557489 | MS.gene066387:intron | 50.0% | |
| TTCAAAATCCAACCCTGCGG+AGG | - | chr5.1:32555114-32555133 | MS.gene066387:intron | 50.0% | |
| TTGACTCCATGTCTGTCTCG+GGG | - | chr5.1:32556838-32556857 | MS.gene066387:intron | 50.0% | |
| TTGGGTTTCCCGATACTACG+TGG | - | chr5.1:32557469-32557488 | MS.gene066387:intron | 50.0% | |
| ! | CCAAAGCATTTCCCACTAGC+AGG | + | chr5.1:32556084-32556103 | None:intergenic | 50.0% |
| ! | TCAATCATGATGGAGGACGG+AGG | - | chr5.1:32555062-32555081 | MS.gene066387:intron | 50.0% |
| ! | TGCTCACTTGCTGAACGTCA+AGG | - | chr5.1:32557778-32557797 | MS.gene066387:intron | 50.0% |
| !!! | TAACTCACGCAGGGGCATTT+TGG | - | chr5.1:32554856-32554875 | MS.gene066387:intron | 50.0% |
| !!! | TAACTCACGCAGGGGCATTT+TGG | + | chr5.1:32554875-32554856 | None:intergenic | 50.0% |
| AACTAGCTGAAGGAGGGAGG+GGG | + | chr5.1:32557067-32557086 | None:intergenic | 55.0% | |
| ACAACATGCGCCTGGGGTTA+AGG | + | chr5.1:32554696-32554715 | None:intergenic | 55.0% | |
| AGAACACCCCCAAAGCCCTA+TGG | - | chr5.1:32554933-32554952 | MS.gene066387:intron | 55.0% | |
| AGCCCTAACCCATAGGGCTT+TGG | + | chr5.1:32554945-32554964 | None:intergenic | 55.0% | |
| CAACATGCGCCTGGGGTTAA+GGG | + | chr5.1:32554695-32554714 | None:intergenic | 55.0% | |
| CAGCTAGAAGCTGTCCCGAA+TGG | + | chr5.1:32558736-32558755 | None:intergenic | 55.0% | |
| CCCTAACCCATAGGGCTTTG+GGG | + | chr5.1:32554943-32554962 | None:intergenic | 55.0% | |
| GAACACCCCCAAAGCCCTAT+GGG | - | chr5.1:32554934-32554953 | MS.gene066387:intron | 55.0% | |
| GCCCTAACCCATAGGGCTTT+GGG | + | chr5.1:32554944-32554963 | None:intergenic | 55.0% | |
| GCGTGAGTTAACTCACGCAG+GGG | + | chr5.1:32554766-32554785 | None:intergenic | 55.0% | |
| GTCCCGCGTCAGTGTAAAAC+TGG | + | chr5.1:32555219-32555238 | None:intergenic | 55.0% | |
| TAACCCCAGGCGCATGTTGT+GGG | - | chr5.1:32554696-32554715 | MS.gene066387:intron | 55.0% | |
| TGAGGCAGCCCTAACCCATA+GGG | + | chr5.1:32554951-32554970 | None:intergenic | 55.0% | |
| TGCGGGAGTTAACTCACGCA+GGG | - | chr5.1:32554847-32554866 | MS.gene066387:intron | 55.0% | |
| TTAACCCCAGGCGCATGTTG+TGG | - | chr5.1:32554695-32554714 | MS.gene066387:intron | 55.0% | |
| ! | CCCCAAAGCCCTATGGGTTA+GGG | - | chr5.1:32554940-32554959 | MS.gene066387:intron | 55.0% |
| ! | CCTAACCCATAGGGCTTTGG+GGG | + | chr5.1:32554942-32554961 | None:intergenic | 55.0% |
| CACTGACGCGGGACATCAGT+AGG | - | chr5.1:32555225-32555244 | MS.gene066387:intron | 60.0% | |
| CCCCCAAAGCCCTATGGGTT+AGG | - | chr5.1:32554939-32554958 | MS.gene066387:intron | 60.0% | |
| CTGCGGGAGTTAACTCACGC+AGG | - | chr5.1:32554846-32554865 | MS.gene066387:intron | 60.0% | |
| GCGGGAGTTAACTCACGCAG+GGG | - | chr5.1:32554848-32554867 | MS.gene066387:intron | 60.0% | |
| GTGAGGCAGCCCTAACCCAT+AGG | + | chr5.1:32554952-32554971 | None:intergenic | 60.0% | |
| GTGTACAACCTCCGCAGGGT+TGG | + | chr5.1:32555125-32555144 | None:intergenic | 60.0% | |
| TTGGCCCACAACATGCGCCT+GGG | + | chr5.1:32554703-32554722 | None:intergenic | 60.0% | |
| CTTGGCCCACAACATGCGCC+TGG | + | chr5.1:32554704-32554723 | None:intergenic | 65.0% | |
| TGGCCCACAACATGCGCCTG+GGG | + | chr5.1:32554702-32554721 | None:intergenic | 65.0% | |
| !! | GGATGGACGGGTTGCGTTGC+AGG | - | chr5.1:32557602-32557621 | MS.gene066387:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 32554025 | 32558962 | 32554025 | ID=MS.gene066387 |
| chr5.1 | mRNA | 32554025 | 32558962 | 32554025 | ID=MS.gene066387.t1;Parent=MS.gene066387 |
| chr5.1 | exon | 32558843 | 32558962 | 32558843 | ID=MS.gene066387.t1.exon1;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32558843 | 32558962 | 32558843 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32558614 | 32558747 | 32558614 | ID=MS.gene066387.t1.exon2;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32558614 | 32558747 | 32558614 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32557255 | 32557337 | 32557255 | ID=MS.gene066387.t1.exon3;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32557255 | 32557337 | 32557255 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32555994 | 32556245 | 32555994 | ID=MS.gene066387.t1.exon4;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32555994 | 32556245 | 32555994 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32555332 | 32555404 | 32555332 | ID=MS.gene066387.t1.exon5;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32555332 | 32555404 | 32555332 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32554576 | 32554656 | 32554576 | ID=MS.gene066387.t1.exon6;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32554576 | 32554656 | 32554576 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32554411 | 32554492 | 32554411 | ID=MS.gene066387.t1.exon7;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32554411 | 32554492 | 32554411 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32554195 | 32554295 | 32554195 | ID=MS.gene066387.t1.exon8;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32554195 | 32554295 | 32554195 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| chr5.1 | exon | 32554025 | 32554103 | 32554025 | ID=MS.gene066387.t1.exon9;Parent=MS.gene066387.t1 |
| chr5.1 | CDS | 32554025 | 32554103 | 32554025 | ID=cds.MS.gene066387.t1;Parent=MS.gene066387.t1 |
| Gene Sequence |
| Protein sequence |
