Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067073.t1 | XP_003601876.2 | 94.2 | 414 | 23 | 1 | 2 | 415 | 1 | 413 | 2.30E-220 | 774.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067073.t1 | A1L4V7 | 57.9 | 411 | 157 | 6 | 8 | 414 | 22 | 420 | 1.8e-128 | 460.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067073.t1 | G7J2M0 | 94.2 | 414 | 23 | 1 | 2 | 415 | 1 | 413 | 1.6e-220 | 774.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene067073 | 0.82283 | 1.92E-53 | -1.69E-46 |
| MS.gene049382 | MS.gene067073 | 0.801849 | 7.42E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene067073 | 0.802377 | 5.78E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene067073 | -0.805964 | 1.03E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene067073 | 0.804011 | 2.65E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene067073 | 0.836292 | 1.02E-56 | -1.69E-46 |
| MS.gene052286 | MS.gene067073 | 0.819292 | 1.25E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene067073 | 0.828004 | 1.14E-54 | -1.69E-46 |
| MS.gene052376 | MS.gene067073 | 0.827063 | 1.92E-54 | -1.69E-46 |
| MS.gene052860 | MS.gene067073 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene067073 | 0.8225 | 2.29E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene067073 | 0.802383 | 5.76E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene067073 | 0.830402 | 3.00E-55 | -1.69E-46 |
| MS.gene056069 | MS.gene067073 | -0.843555 | 1.30E-58 | -1.69E-46 |
| MS.gene056760 | MS.gene067073 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene067073 | 0.830518 | 2.81E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene067073 | 0.80678 | 6.97E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene067073 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene058851 | MS.gene067073 | 0.814215 | 1.73E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene067073 | 0.825636 | 4.21E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene067073 | 0.809001 | 2.35E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067073.t1 | MTR_3g086360 | 93.976 | 415 | 24 | 1 | 2 | 416 | 1 | 414 | 0.0 | 800 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067073.t1 | AT3G26115 | 57.908 | 411 | 157 | 6 | 8 | 414 | 22 | 420 | 4.30e-167 | 476 |
| MS.gene067073.t1 | AT3G26115 | 63.081 | 344 | 114 | 4 | 73 | 414 | 5 | 337 | 2.14e-158 | 450 |
| MS.gene067073.t1 | AT3G26115 | 63.081 | 344 | 114 | 4 | 73 | 414 | 5 | 337 | 2.14e-158 | 450 |
| MS.gene067073.t1 | AT3G26115 | 56.560 | 343 | 135 | 5 | 8 | 346 | 22 | 354 | 3.15e-133 | 387 |
| MS.gene067073.t1 | AT3G26115 | 59.862 | 289 | 103 | 4 | 128 | 414 | 18 | 295 | 5.16e-120 | 351 |
| MS.gene067073.t1 | AT1G48420 | 25.519 | 337 | 199 | 11 | 78 | 406 | 77 | 369 | 2.48e-11 | 65.5 |
| MS.gene067073.t1 | AT1G48420 | 25.519 | 337 | 199 | 11 | 78 | 406 | 77 | 369 | 2.48e-11 | 65.5 |
| MS.gene067073.t1 | AT1G48420 | 25.519 | 337 | 199 | 11 | 78 | 406 | 77 | 369 | 2.48e-11 | 65.5 |
Find 97 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATAACTTGATGAATTT+TGG | 0.113989 | 3.4:-80512659 | None:intergenic |
| TTCTAGATTTGGCAATATTT+TGG | 0.158592 | 3.4:+80517021 | MS.gene067073:intron |
| TTGAACACAAATCCAGATTT+TGG | 0.179164 | 3.4:+80512712 | MS.gene067073:CDS |
| GCTTCCATTTGCATAAAATT+TGG | 0.188543 | 3.4:-80513981 | None:intergenic |
| TCTATAACATCTTACTTTCT+TGG | 0.200155 | 3.4:-80515473 | None:intergenic |
| GACTCCTCACTTAGGAGTTT+TGG | 0.229745 | 3.4:-80512589 | None:intergenic |
| GGAGGCACATTGGGCTTGTT+TGG | 0.235639 | 3.4:+80517190 | MS.gene067073:CDS |
| TTATAGCCAGTCAAGATTTC+AGG | 0.239597 | 3.4:-80513789 | None:intergenic |
| CTGTTGGCGTAAACATTTCT+TGG | 0.300656 | 3.4:-80513849 | None:intergenic |
| TTGTTGCACCCGCTGATTAA+TGG | 0.301555 | 3.4:+80512793 | MS.gene067073:CDS |
| TAGGACAGAACCATTGTTTC+CGG | 0.305021 | 3.4:-80513907 | None:intergenic |
| ACTCCTAAGTGAGGAGTCTA+TGG | 0.308398 | 3.4:+80512594 | MS.gene067073:CDS |
| TTCTTTGTATAGGTATTATT+CGG | 0.317658 | 3.4:+80515025 | MS.gene067073:intron |
| CAAGAAATGTTTACGCCAAC+AGG | 0.321119 | 3.4:+80513850 | MS.gene067073:CDS |
| GAGGCACATTGGGCTTGTTT+GGG | 0.331209 | 3.4:+80517191 | MS.gene067073:CDS |
| AACTTGATGTCTACAATATA+CGG | 0.331391 | 3.4:+80513810 | MS.gene067073:CDS |
| TGGTAATAAAGCAAGAAAAT+TGG | 0.340129 | 3.4:+80512813 | MS.gene067073:CDS |
| ACATTGCCATTACCAAAATC+TGG | 0.350689 | 3.4:-80512724 | None:intergenic |
| CACATTGGGCTTGTTTGGGT+TGG | 0.353121 | 3.4:+80517195 | MS.gene067073:CDS |
| GGACTGGCAGCGCTTTGCTT+AGG | 0.368886 | 3.4:+80515144 | MS.gene067073:CDS |
| CTTCATACTGGAGGCACATT+GGG | 0.385183 | 3.4:+80517181 | MS.gene067073:CDS |
| CCACTAGAATACCAGTTTGC+TGG | 0.406758 | 3.4:-80517075 | None:intergenic |
| GTGAAGTTTGTTGTGGATGC+TGG | 0.420790 | 3.4:+80515096 | MS.gene067073:CDS |
| AATTGATGGGTACCGAAAAC+AGG | 0.432157 | 3.4:+80515346 | MS.gene067073:CDS |
| GGTGATTCTGTTGCTCTACT+AGG | 0.439298 | 3.4:+80514059 | MS.gene067073:CDS |
| GACTGGCAGCGCTTTGCTTA+GGG | 0.442766 | 3.4:+80515145 | MS.gene067073:CDS |
| TTTGTTGTGGATGCTGGTAC+TGG | 0.444120 | 3.4:+80515102 | MS.gene067073:CDS |
| CAGCAAATTGCCCAGCAAAC+TGG | 0.448004 | 3.4:+80517064 | MS.gene067073:CDS |
| TGTCTACACATTAGCTGCTT+GGG | 0.449660 | 3.4:+80517102 | MS.gene067073:CDS |
| CTTTAGCATTTCTTCCCTGT+TGG | 0.450134 | 3.4:-80513865 | None:intergenic |
| AGTGCCCACACAGCTGCTAT+TGG | 0.450794 | 3.4:+80513584 | MS.gene067073:CDS |
| CACGATGTAAACAAAGATGA+TGG | 0.462326 | 3.4:+80515422 | MS.gene067073:CDS |
| TTGTCGCAGAATCATTTACT+TGG | 0.469233 | 3.4:+80515060 | MS.gene067073:CDS |
| TGCTTCTGTGCAGACTCCCA+TGG | 0.469456 | 3.4:+80515294 | MS.gene067073:intron |
| CTTTATTACCATTAATCAGC+GGG | 0.489787 | 3.4:-80512801 | None:intergenic |
| ATCATTTACTTGGGAAACAA+AGG | 0.490526 | 3.4:+80515070 | MS.gene067073:CDS |
| GAAGTGGTGATGCTTCATAC+TGG | 0.490583 | 3.4:+80517169 | MS.gene067073:CDS |
| AGTTATTCATAAACATGGAC+TGG | 0.493891 | 3.4:+80512672 | MS.gene067073:CDS |
| CACTAGAATACCAGTTTGCT+GGG | 0.498244 | 3.4:-80517074 | None:intergenic |
| CTGTCTACACATTAGCTGCT+TGG | 0.498673 | 3.4:+80517101 | MS.gene067073:CDS |
| GAATGAAGACGGAGCAGAAG+TGG | 0.505718 | 3.4:+80517153 | MS.gene067073:CDS |
| ATGCTGGCTGATAAAATTGA+TGG | 0.508131 | 3.4:+80515332 | MS.gene067073:CDS |
| TAACATCTTACTTTCTTGGA+TGG | 0.510447 | 3.4:-80515469 | None:intergenic |
| GAAACAATGGTTCTGTCCTA+TGG | 0.515150 | 3.4:+80513910 | MS.gene067073:CDS |
| CAAGCAGCTAATGTGTAGAC+AGG | 0.521364 | 3.4:-80517100 | None:intergenic |
| AAGATGATGGGATTGTGCAC+TGG | 0.522667 | 3.4:+80515435 | MS.gene067073:CDS |
| GGCACAACAGCAGTTGGTAT+AGG | 0.525800 | 3.4:+80515123 | MS.gene067073:CDS |
| TTAATTGTCAATGAAGGGGC+TGG | 0.526047 | 3.4:+80514038 | MS.gene067073:CDS |
| GGCACTCTGACAACCTCCAC+AGG | 0.529946 | 3.4:-80513567 | None:intergenic |
| GCTTCATACTGGAGGCACAT+TGG | 0.536337 | 3.4:+80517180 | MS.gene067073:CDS |
| CATCAAGTTATTCATAAACA+TGG | 0.536859 | 3.4:+80512667 | MS.gene067073:CDS |
| AGCTATGCCGAGTCAGTGGC+CGG | 0.538289 | 3.4:+80513888 | MS.gene067073:CDS |
| TCATTTACTTGGGAAACAAA+GGG | 0.538446 | 3.4:+80515071 | MS.gene067073:CDS |
| TTTCCATAGACTCCTCACTT+AGG | 0.538776 | 3.4:-80512597 | None:intergenic |
| GAATGATATCACTGAACCAT+AGG | 0.540099 | 3.4:-80513926 | None:intergenic |
| AATAAAGCAAGAAAATTGGA+TGG | 0.546969 | 3.4:+80512817 | MS.gene067073:CDS |
| ATTGTTTCCGGCCACTGACT+CGG | 0.547238 | 3.4:-80513895 | None:intergenic |
| GCTTCTGTGCAGACTCCCAT+GGG | 0.548103 | 3.4:+80515295 | MS.gene067073:intron |
| TGTCGCAGAATCATTTACTT+GGG | 0.550672 | 3.4:+80515061 | MS.gene067073:CDS |
| CACATTAGCTGCTTGGGAAG+CGG | 0.554018 | 3.4:+80517108 | MS.gene067073:CDS |
| GACTTTATAATCATGAAGCA+AGG | 0.554313 | 3.4:-80512848 | None:intergenic |
| GAGCAACCTGAAATCTTGAC+TGG | 0.557621 | 3.4:+80513783 | MS.gene067073:CDS |
| AGATGATGGGATTGTGCACT+GGG | 0.557894 | 3.4:+80515436 | MS.gene067073:CDS |
| ATGACTGCATATACCTCCCA+TGG | 0.564868 | 3.4:-80515311 | None:intergenic |
| GGAGGTATATGCAGTCATGC+TGG | 0.575564 | 3.4:+80515316 | MS.gene067073:CDS |
| GAGTCAGTGGCCGGAAACAA+TGG | 0.576023 | 3.4:+80513897 | MS.gene067073:CDS |
| AACAGCAGTTGGTATAGGAC+TGG | 0.582658 | 3.4:+80515128 | MS.gene067073:CDS |
| GCTGTTCTGGGTGCTGAGAG+AGG | 0.588523 | 3.4:+80513732 | MS.gene067073:intron |
| CATACCAATAGCAGCTGTGT+GGG | 0.593164 | 3.4:-80513588 | None:intergenic |
| ACGATGTAAACAAAGATGAT+GGG | 0.599833 | 3.4:+80515423 | MS.gene067073:CDS |
| GCTTGTTTGGGTTGGCACAG+AGG | 0.603118 | 3.4:+80517203 | MS.gene067073:CDS |
| GTTATTCATAAACATGGACT+GGG | 0.608725 | 3.4:+80512673 | MS.gene067073:CDS |
| CATCATCTTTGTTTACATCG+TGG | 0.609610 | 3.4:-80515421 | None:intergenic |
| AAGGGCTGTGAAGTTTGTTG+TGG | 0.613607 | 3.4:+80515089 | MS.gene067073:CDS |
| AAAGAGCTATGCCGAGTCAG+TGG | 0.614125 | 3.4:+80513884 | MS.gene067073:CDS |
| CTCTTCGCTAGAAAGAAGCA+TGG | 0.618633 | 3.4:-80517131 | None:intergenic |
| CCAGCAAACTGGTATTCTAG+TGG | 0.620364 | 3.4:+80517075 | MS.gene067073:CDS |
| ACTTTATAATCATGAAGCAA+GGG | 0.622788 | 3.4:-80512847 | None:intergenic |
| GCTTTATTACCATTAATCAG+CGG | 0.623719 | 3.4:-80512802 | None:intergenic |
| TGATTATAAAGTCACTGATG+TGG | 0.625747 | 3.4:+80512858 | MS.gene067073:CDS |
| TGCTGGCTGATAAAATTGAT+GGG | 0.627219 | 3.4:+80515333 | MS.gene067073:CDS |
| AATGGAAGCTAGTCAAAGTG+AGG | 0.628363 | 3.4:+80513995 | MS.gene067073:CDS |
| GGTACTGGCACAACAGCAGT+TGG | 0.628373 | 3.4:+80515117 | MS.gene067073:CDS |
| AAGAAATGTTTACGCCAACA+GGG | 0.631071 | 3.4:+80513851 | MS.gene067073:CDS |
| TCTGTGCAGACTCCCATGGG+AGG | 0.637900 | 3.4:+80515298 | MS.gene067073:intron |
| TCTAGCGAAGAGAATGAAGA+CGG | 0.643292 | 3.4:+80517142 | MS.gene067073:CDS |
| ACATACCAATAGCAGCTGTG+TGG | 0.653521 | 3.4:-80513589 | None:intergenic |
| AAAAGTTACTCAACAGAACG+TGG | 0.653642 | 3.4:+80512617 | MS.gene067073:CDS |
| ATGTTGAAATCGATAAACAA+AGG | 0.654558 | 3.4:+80512743 | MS.gene067073:CDS |
| GAAACCAAAACTCCTAAGTG+AGG | 0.658643 | 3.4:+80512585 | MS.gene067073:CDS |
| TGACTGCATATACCTCCCAT+GGG | 0.661084 | 3.4:-80515310 | None:intergenic |
| ATGGAAGCTAGTCAAAGTGA+GGG | 0.664903 | 3.4:+80513996 | MS.gene067073:CDS |
| GTGGTGATGCTTCATACTGG+AGG | 0.678053 | 3.4:+80517172 | MS.gene067073:CDS |
| ATTCATAAACATGGACTGGG+AGG | 0.691026 | 3.4:+80512676 | MS.gene067073:CDS |
| TACCTTGTAGGGGTAAGACG+TGG | 0.703169 | 3.4:+80517335 | MS.gene067073:intron |
| TGATGGGATTGTGCACTGGG+TGG | 0.714319 | 3.4:+80515439 | MS.gene067073:CDS |
| ATGTCACATCTGCTTCTACG+AGG | 0.730665 | 3.4:+80513759 | MS.gene067073:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATAATATCTTTAATATA+TGG | - | chr3.4:80514300-80514319 | None:intergenic | 10.0% |
| !! | TCTTATTATATACTATTAAT+GGG | + | chr3.4:80513122-80513141 | MS.gene067073:intron | 10.0% |
| !! | TTCTTATTATATACTATTAA+TGG | + | chr3.4:80513121-80513140 | MS.gene067073:intron | 10.0% |
| !!! | GAACAATAAATTAATATTTT+TGG | + | chr3.4:80514332-80514351 | MS.gene067073:intron | 10.0% |
| !!! | TTTACTATTCTTTATTTTAT+TGG | + | chr3.4:80512942-80512961 | MS.gene067073:intron | 10.0% |
| !!! | TTTTTTTTCTTTCTTTTTTA+TGG | + | chr3.4:80515499-80515518 | MS.gene067073:intron | 10.0% |
| !! | GAAAATTTAATATATAAGTG+AGG | + | chr3.4:80514236-80514255 | MS.gene067073:intron | 15.0% |
| !! | GATTATCATTTATTAAGAAT+AGG | + | chr3.4:80514834-80514853 | MS.gene067073:intron | 15.0% |
| !! | GTTCATATAAATATAAAAGA+AGG | - | chr3.4:80516350-80516369 | None:intergenic | 15.0% |
| !! | TAATAAGATTTAGTTAAGAA+CGG | - | chr3.4:80514485-80514504 | None:intergenic | 15.0% |
| !! | TATTAAAGATATTATTGAAC+AGG | + | chr3.4:80514302-80514321 | MS.gene067073:intron | 15.0% |
| !! | TTCTTAATAAATGATAATCA+AGG | - | chr3.4:80514833-80514852 | None:intergenic | 15.0% |
| !! | TTGATATATATTGTTGTAAT+TGG | + | chr3.4:80514710-80514729 | MS.gene067073:intron | 15.0% |
| !! | TTTATTTAATTCTACAAAGT+TGG | + | chr3.4:80514943-80514962 | MS.gene067073:intron | 15.0% |
| !!! | AAAATGTTATTTCTTTGTAT+AGG | + | chr3.4:80515015-80515034 | MS.gene067073:intron | 15.0% |
| !!! | AGTAAATTTTGCAATTAATA+AGG | - | chr3.4:80513233-80513252 | None:intergenic | 15.0% |
| !!! | ATAGATTTTTTTTAGTAGTA+AGG | + | chr3.4:80515914-80515933 | MS.gene067073:intron | 15.0% |
| !!! | ATTTTATTATTTACCTTGTA+GGG | + | chr3.4:80517324-80517343 | MS.gene067073:intron | 15.0% |
| !!! | CAAATAATGTAATTTCTTTT+GGG | + | chr3.4:80517299-80517318 | MS.gene067073:intron | 15.0% |
| !!! | TAATACTACTTTTCATATAA+TGG | + | chr3.4:80513693-80513712 | MS.gene067073:intron | 15.0% |
| !!! | TAGATTTTTTTTAGTAGTAA+GGG | + | chr3.4:80515915-80515934 | MS.gene067073:intron | 15.0% |
| !!! | TATTTTATTATTTACCTTGT+AGG | + | chr3.4:80517323-80517342 | MS.gene067073:intron | 15.0% |
| !!! | TCAAATAATGTAATTTCTTT+TGG | + | chr3.4:80517298-80517317 | MS.gene067073:intron | 15.0% |
| !! | AAAAAGTGAGTTAACTTTAA+CGG | + | chr3.4:80513187-80513206 | MS.gene067073:intron | 20.0% |
| !! | AAATACAGATAACTTTATCT+AGG | - | chr3.4:80514211-80514230 | None:intergenic | 20.0% |
| !! | ACTAAAAAAAATCTATCCTT+CGG | - | chr3.4:80515910-80515929 | None:intergenic | 20.0% |
| !! | AGTTTAAATTTACCTATTTG+AGG | - | chr3.4:80516049-80516068 | None:intergenic | 20.0% |
| !! | ATAAATGATAATCAAGGAAA+AGG | - | chr3.4:80514827-80514846 | None:intergenic | 20.0% |
| !! | ATATATTGTTGTAATTGGAA+TGG | + | chr3.4:80514715-80514734 | MS.gene067073:intron | 20.0% |
| !! | ATTATAAATATCTCAGATTG+TGG | + | chr3.4:80513360-80513379 | MS.gene067073:intron | 20.0% |
| !! | CACTTGTATTTATTTGAAAA+AGG | - | chr3.4:80516834-80516853 | None:intergenic | 20.0% |
| !! | TATGATAAGGAACAAATTAA+AGG | - | chr3.4:80513460-80513479 | None:intergenic | 20.0% |
| !! | TCATTTATTAAGAATAGGAT+AGG | + | chr3.4:80514839-80514858 | MS.gene067073:intron | 20.0% |
| !! | TGAAATTCAGTTAACTTTAA+TGG | + | chr3.4:80514969-80514988 | MS.gene067073:intron | 20.0% |
| !! | TTATAAATATCTCAGATTGT+GGG | + | chr3.4:80513361-80513380 | MS.gene067073:intron | 20.0% |
| !! | TTCTTTGTATAGGTATTATT+CGG | + | chr3.4:80515025-80515044 | MS.gene067073:intron | 20.0% |
| !!! | AAGATTTTAATTGTCAATGA+AGG | + | chr3.4:80514032-80514051 | MS.gene067073:CDS | 20.0% |
| !!! | AGAAAATCCATACTTTTAAA+AGG | + | chr3.4:80516608-80516627 | MS.gene067073:intron | 20.0% |
| !!! | AGATTTTAATTGTCAATGAA+GGG | + | chr3.4:80514033-80514052 | MS.gene067073:CDS | 20.0% |
| !!! | ATGAATAACTTGATGAATTT+TGG | - | chr3.4:80512662-80512681 | None:intergenic | 20.0% |
| !!! | GAAAATCCATACTTTTAAAA+GGG | + | chr3.4:80516609-80516628 | MS.gene067073:intron | 20.0% |
| !!! | GAATTAAAGGCTTAATTTTT+GGG | - | chr3.4:80513025-80513044 | None:intergenic | 20.0% |
| !!! | GTTTTTAACCATATTAGAAA+AGG | + | chr3.4:80515242-80515261 | MS.gene067073:intron | 20.0% |
| !!! | TACACTATTGTTTTTTGTTT+GGG | - | chr3.4:80515956-80515975 | None:intergenic | 20.0% |
| !!! | TCATATATCCTTTTCTAATA+TGG | - | chr3.4:80515253-80515272 | None:intergenic | 20.0% |
| !!! | TGAATTAAAGGCTTAATTTT+TGG | - | chr3.4:80513026-80513045 | None:intergenic | 20.0% |
| !!! | TTACACTATTGTTTTTTGTT+TGG | - | chr3.4:80515957-80515976 | None:intergenic | 20.0% |
| !!! | TTTATTTGAAAAAGGCATAT+TGG | - | chr3.4:80516826-80516845 | None:intergenic | 20.0% |
| !!! | TTTTATTATTTACCTTGTAG+GGG | + | chr3.4:80517325-80517344 | MS.gene067073:intron | 20.0% |
| ! | AAAAACAATAGTGTAAAGAC+AGG | + | chr3.4:80515961-80515980 | MS.gene067073:intron | 25.0% |
| ! | AAAACAACAAAGCATATCTT+TGG | + | chr3.4:80514103-80514122 | MS.gene067073:intron | 25.0% |
| ! | AAAAGTGAGTTAACTTTAAC+GGG | + | chr3.4:80513188-80513207 | MS.gene067073:intron | 25.0% |
| ! | AAACAACAAAGCATATCTTT+GGG | + | chr3.4:80514104-80514123 | MS.gene067073:intron | 25.0% |
| ! | AACTTGATGTCTACAATATA+CGG | + | chr3.4:80513810-80513829 | MS.gene067073:CDS | 25.0% |
| ! | AATAAAGCAAGAAAATTGGA+TGG | + | chr3.4:80512817-80512836 | MS.gene067073:CDS | 25.0% |
| ! | ACTTCTTACTATTTCACTAA+AGG | - | chr3.4:80516399-80516418 | None:intergenic | 25.0% |
| ! | ACTTTATAATCATGAAGCAA+GGG | - | chr3.4:80512850-80512869 | None:intergenic | 25.0% |
| ! | AGGTAAAAATCTAGATATGA+GGG | + | chr3.4:80514144-80514163 | MS.gene067073:intron | 25.0% |
| ! | ATGTTGAAATCGATAAACAA+AGG | + | chr3.4:80512743-80512762 | MS.gene067073:CDS | 25.0% |
| ! | ATTGGCATTACAAATTACAA+AGG | - | chr3.4:80516808-80516827 | None:intergenic | 25.0% |
| ! | CATCAAGTTATTCATAAACA+TGG | + | chr3.4:80512667-80512686 | MS.gene067073:CDS | 25.0% |
| ! | CTCATAATTATACACTATCA+TGG | - | chr3.4:80514791-80514810 | None:intergenic | 25.0% |
| ! | GTTTATGATAAATCTACGAT+GGG | + | chr3.4:80516749-80516768 | MS.gene067073:intron | 25.0% |
| ! | TAACTGATTGATAAGTTTCT+AGG | - | chr3.4:80514903-80514922 | None:intergenic | 25.0% |
| ! | TACTGAGCATTCATTATTAA+AGG | - | chr3.4:80516197-80516216 | None:intergenic | 25.0% |
| ! | TAGGTAAAAATCTAGATATG+AGG | + | chr3.4:80514143-80514162 | MS.gene067073:intron | 25.0% |
| ! | TATGAACGAACATTTATAGT+TGG | + | chr3.4:80516991-80517010 | MS.gene067073:intron | 25.0% |
| ! | TCTATAACATCTTACTTTCT+TGG | - | chr3.4:80515476-80515495 | None:intergenic | 25.0% |
| ! | TGGTAATAAAGCAAGAAAAT+TGG | + | chr3.4:80512813-80512832 | MS.gene067073:CDS | 25.0% |
| ! | TTAACTTTAATGGTTTGATG+TGG | + | chr3.4:80514979-80514998 | MS.gene067073:intron | 25.0% |
| ! | TTTATCTAGATGATACAAAG+AGG | - | chr3.4:80516954-80516973 | None:intergenic | 25.0% |
| !! | ATAAAAAAGCGCAAACAAAA+AGG | + | chr3.4:80515818-80515837 | MS.gene067073:intron | 25.0% |
| !! | CAATTAAAATCTTTTGACGA+TGG | - | chr3.4:80514025-80514044 | None:intergenic | 25.0% |
| !! | CATGATAGTGTATAATTATG+AGG | + | chr3.4:80514789-80514808 | MS.gene067073:intron | 25.0% |
| !! | CTTGACTGATAATGAATTAA+AGG | - | chr3.4:80513038-80513057 | None:intergenic | 25.0% |
| !! | GTATGTAATTTTCTGAGTTA+TGG | + | chr3.4:80513606-80513625 | MS.gene067073:intron | 25.0% |
| !! | TAAAAAAGCGCAAACAAAAA+GGG | + | chr3.4:80515819-80515838 | MS.gene067073:intron | 25.0% |
| !! | TAATTTTATTGCTAAACCAG+TGG | - | chr3.4:80513168-80513187 | None:intergenic | 25.0% |
| !! | TATAGAAGTTTAAGATGTGA+AGG | + | chr3.4:80516282-80516301 | MS.gene067073:intron | 25.0% |
| !! | TGTTGAATGTTATTTGATCT+TGG | - | chr3.4:80513529-80513548 | None:intergenic | 25.0% |
| !! | TGTTTGGTTCATATTGATAA+TGG | - | chr3.4:80514265-80514284 | None:intergenic | 25.0% |
| !! | TTCTAGATTTGGCAATATTT+TGG | + | chr3.4:80517021-80517040 | MS.gene067073:intron | 25.0% |
| !! | TTCTCCAAATTTTATGCAAA+TGG | + | chr3.4:80513977-80513996 | MS.gene067073:CDS | 25.0% |
| !!! | ACAGTAGTTTTAAGAAGAAA+AGG | - | chr3.4:80514690-80514709 | None:intergenic | 25.0% |
| !!! | CAGAGGTACAAAAATTATTT+TGG | + | chr3.4:80517220-80517239 | MS.gene067073:intron | 25.0% |
| !!! | GATTTTAATTGTCAATGAAG+GGG | + | chr3.4:80514034-80514053 | MS.gene067073:CDS | 25.0% |
| !!! | TATAGAAGTTTAAGTTGTGA+AGG | + | chr3.4:80516237-80516256 | MS.gene067073:intron | 25.0% |
| !!! | TTAGTTTTTTATGATCTGCT+AGG | + | chr3.4:80516127-80516146 | MS.gene067073:intron | 25.0% |
| !!! | TTTGTTTGCGCTTTTTTATA+GGG | - | chr3.4:80515817-80515836 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGCGCTTTTTTAT+AGG | - | chr3.4:80515818-80515837 | None:intergenic | 25.0% |
| AAAATGTAAGGGTTTAAGGA+AGG | - | chr3.4:80516781-80516800 | None:intergenic | 30.0% | |
| AAAGAAGAGGATATTGTGTT+AGG | - | chr3.4:80515663-80515682 | None:intergenic | 30.0% | |
| AAATGTAAGGGTTTAAGGAA+GGG | - | chr3.4:80516780-80516799 | None:intergenic | 30.0% | |
| AAGAAGAGGATATTGTGTTA+GGG | - | chr3.4:80515662-80515681 | None:intergenic | 30.0% | |
| ACGATGTAAACAAAGATGAT+GGG | + | chr3.4:80515423-80515442 | MS.gene067073:CDS | 30.0% | |
| AGTTATTCATAAACATGGAC+TGG | + | chr3.4:80512672-80512691 | MS.gene067073:CDS | 30.0% | |
| AGTTATTGTTACCAACAGAA+CGG | - | chr3.4:80516908-80516927 | None:intergenic | 30.0% | |
| ATCATTTACTTGGGAAACAA+AGG | + | chr3.4:80515070-80515089 | MS.gene067073:CDS | 30.0% | |
| ATGGTATGAAATGAGATGTT+TGG | - | chr3.4:80514281-80514300 | None:intergenic | 30.0% | |
| ATTATCAGTCAAGACTCAAA+AGG | + | chr3.4:80513045-80513064 | MS.gene067073:intron | 30.0% | |
| CTAAAATCAATTTCATTGCG+TGG | - | chr3.4:80513501-80513520 | None:intergenic | 30.0% | |
| CTTCAGTAGAAAATGTAACA+AGG | - | chr3.4:80516079-80516098 | None:intergenic | 30.0% | |
| CTTTATTACCATTAATCAGC+GGG | - | chr3.4:80512804-80512823 | None:intergenic | 30.0% | |
| GAAATTACCTATCAAAGGAA+AGG | - | chr3.4:80512565-80512584 | None:intergenic | 30.0% | |
| GACTTTATAATCATGAAGCA+AGG | - | chr3.4:80512851-80512870 | None:intergenic | 30.0% | |
| GCAAATAGTATAAGACAAGA+CGG | + | chr3.4:80516727-80516746 | MS.gene067073:intron | 30.0% | |
| GCTTCCATTTGCATAAAATT+TGG | - | chr3.4:80513984-80514003 | None:intergenic | 30.0% | |
| GGTTTATGATAAATCTACGA+TGG | + | chr3.4:80516748-80516767 | MS.gene067073:intron | 30.0% | |
| GTTATTCATAAACATGGACT+GGG | + | chr3.4:80512673-80512692 | MS.gene067073:CDS | 30.0% | |
| GTTTCGAAATTACCTATCAA+AGG | - | chr3.4:80512570-80512589 | None:intergenic | 30.0% | |
| TAACATCTTACTTTCTTGGA+TGG | - | chr3.4:80515472-80515491 | None:intergenic | 30.0% | |
| TCAGGTCTAAATCATAGAAT+CGG | + | chr3.4:80516687-80516706 | MS.gene067073:intron | 30.0% | |
| TCATTTACTTGGGAAACAAA+GGG | + | chr3.4:80515071-80515090 | MS.gene067073:CDS | 30.0% | |
| TGATTATAAAGTCACTGATG+TGG | + | chr3.4:80512858-80512877 | MS.gene067073:CDS | 30.0% | |
| TGGCAAGCTAAAAAATGATT+TGG | + | chr3.4:80517240-80517259 | MS.gene067073:intron | 30.0% | |
| TGTAAGGTTCTTGAAAAGTA+AGG | - | chr3.4:80514658-80514677 | None:intergenic | 30.0% | |
| TTACTGCTACTATTCATGTT+GGG | + | chr3.4:80515220-80515239 | MS.gene067073:intron | 30.0% | |
| TTAGTATAGCAGAAAAGAAG+AGG | - | chr3.4:80515676-80515695 | None:intergenic | 30.0% | |
| TTATCAGTCAAGACTCAAAA+GGG | + | chr3.4:80513046-80513065 | MS.gene067073:intron | 30.0% | |
| TTTACTGCTACTATTCATGT+TGG | + | chr3.4:80515219-80515238 | MS.gene067073:intron | 30.0% | |
| ! | AAAAAAGCGCAAACAAAAAG+GGG | + | chr3.4:80515820-80515839 | MS.gene067073:intron | 30.0% |
| ! | AAAGGGTTTTCAGTAAAATC+AGG | + | chr3.4:80513063-80513082 | MS.gene067073:intron | 30.0% |
| ! | AAATCACTAGGAGTATGATA+AGG | - | chr3.4:80513473-80513492 | None:intergenic | 30.0% |
| ! | AAATTGTTTTCCAAGAGAGA+TGG | + | chr3.4:80516458-80516477 | MS.gene067073:intron | 30.0% |
| ! | ACAAAGGAAAAGCTTTTATG+TGG | + | chr3.4:80512759-80512778 | MS.gene067073:CDS | 30.0% |
| ! | ATTCAACAACGACATTTTCT+AGG | + | chr3.4:80513541-80513560 | MS.gene067073:intron | 30.0% |
| ! | ATTGATAAGTTTCTAGGTAC+AGG | - | chr3.4:80514897-80514916 | None:intergenic | 30.0% |
| ! | CTTGTTACATTTTCTACTGA+AGG | + | chr3.4:80516077-80516096 | MS.gene067073:intron | 30.0% |
| ! | GCTTTATTACCATTAATCAG+CGG | - | chr3.4:80512805-80512824 | None:intergenic | 30.0% |
| ! | TTAAAAGCGTAATATGCTGA+CGG | - | chr3.4:80516428-80516447 | None:intergenic | 30.0% |
| ! | TTCCTTAAACCCTTACATTT+TGG | + | chr3.4:80516780-80516799 | MS.gene067073:intron | 30.0% |
| ! | TTCGACAAGAGTATATATGT+TGG | + | chr3.4:80514869-80514888 | MS.gene067073:intron | 30.0% |
| ! | TTGAACACAAATCCAGATTT+TGG | + | chr3.4:80512712-80512731 | MS.gene067073:CDS | 30.0% |
| ! | TTGGTCTCTTTTTCTAGATT+TGG | + | chr3.4:80517010-80517029 | MS.gene067073:intron | 30.0% |
| ! | TTTTGGTATTAATAACCCTC+CGG | + | chr3.4:80514349-80514368 | MS.gene067073:intron | 30.0% |
| !! | ACAAATCCAGATTTTGGTAA+TGG | + | chr3.4:80512718-80512737 | MS.gene067073:CDS | 30.0% |
| !! | AGATTTGGCAATATTTTGGA+TGG | + | chr3.4:80517025-80517044 | MS.gene067073:intron | 30.0% |
| !! | ATTTGGCAATATTTTGGATG+GGG | + | chr3.4:80517027-80517046 | MS.gene067073:CDS | 30.0% |
| !! | CACGCAATGAAATTGATTTT+AGG | + | chr3.4:80513499-80513518 | MS.gene067073:intron | 30.0% |
| !! | GATTTGGCAATATTTTGGAT+GGG | + | chr3.4:80517026-80517045 | MS.gene067073:intron | 30.0% |
| !! | GTTGTAAAGTATCAAGTTGA+AGG | - | chr3.4:80512892-80512911 | None:intergenic | 30.0% |
| !! | TTCTGTTGGTAACAATAACT+AGG | + | chr3.4:80516908-80516927 | MS.gene067073:intron | 30.0% |
| !!! | ACTTGATGAATTTTGGTTTC+AGG | - | chr3.4:80512655-80512674 | None:intergenic | 30.0% |
| !!! | CATACTTTTAAAAGGGTGTT+GGG | + | chr3.4:80516616-80516635 | MS.gene067073:intron | 30.0% |
| !!! | CTTGATGAATTTTGGTTTCA+GGG | - | chr3.4:80512654-80512673 | None:intergenic | 30.0% |
| !!! | TTTTTTTAGTAGTAAGGGCA+GGG | + | chr3.4:80515920-80515939 | MS.gene067073:intron | 30.0% |
| !!! | TTTTTTTTAGTAGTAAGGGC+AGG | + | chr3.4:80515919-80515938 | MS.gene067073:intron | 30.0% |
| AAAAGTTACTCAACAGAACG+TGG | + | chr3.4:80512617-80512636 | MS.gene067073:CDS | 35.0% | |
| AACCAAGATTCTTGCTCAAA+AGG | - | chr3.4:80513092-80513111 | None:intergenic | 35.0% | |
| AAGAAATGTTTACGCCAACA+GGG | + | chr3.4:80513851-80513870 | MS.gene067073:CDS | 35.0% | |
| AAGCATGTTTCACTCAAAAC+AGG | + | chr3.4:80516513-80516532 | MS.gene067073:intron | 35.0% | |
| AATTCCAAAGAAAGAAGGTG+AGG | - | chr3.4:80515743-80515762 | None:intergenic | 35.0% | |
| ACAAAGGAGCCAAAATGTAA+GGG | - | chr3.4:80516792-80516811 | None:intergenic | 35.0% | |
| ACAATCATTCTGAGTTAGTG+AGG | - | chr3.4:80512501-80512520 | None:intergenic | 35.0% | |
| ACATTGCCATTACCAAAATC+TGG | - | chr3.4:80512727-80512746 | None:intergenic | 35.0% | |
| ACCTATCAAAGGAAAGGAAA+GGG | - | chr3.4:80512559-80512578 | None:intergenic | 35.0% | |
| AGCCAAAATGTAAGGGTTTA+AGG | - | chr3.4:80516785-80516804 | None:intergenic | 35.0% | |
| AGGCTTGAAATTAAAGACAG+TGG | - | chr3.4:80515996-80516015 | None:intergenic | 35.0% | |
| ATAATGAATGCTCAGTAGTC+AGG | + | chr3.4:80516200-80516219 | MS.gene067073:intron | 35.0% | |
| ATTTGAGAGTAAGGAAGGTT+TGG | - | chr3.4:80515634-80515653 | None:intergenic | 35.0% | |
| CACGATGTAAACAAAGATGA+TGG | + | chr3.4:80515422-80515441 | MS.gene067073:CDS | 35.0% | |
| CAGTAGAAAATGTAACAAGG+AGG | - | chr3.4:80516076-80516095 | None:intergenic | 35.0% | |
| CTCAGAATGATTGTTATAGC+TGG | + | chr3.4:80512507-80512526 | MS.gene067073:intron | 35.0% | |
| GAATGATATCACTGAACCAT+AGG | - | chr3.4:80513929-80513948 | None:intergenic | 35.0% | |
| GACCTAATTCCAAAGAAAGA+AGG | - | chr3.4:80515748-80515767 | None:intergenic | 35.0% | |
| GACTAAAGATTGTTTCAGTC+AGG | + | chr3.4:80514432-80514451 | MS.gene067073:intron | 35.0% | |
| GATACCACTTCAGTTGTTTA+TGG | - | chr3.4:80513273-80513292 | None:intergenic | 35.0% | |
| GATTCTATGATTTAGACCTG+AGG | - | chr3.4:80516688-80516707 | None:intergenic | 35.0% | |
| GCTTGAAATTAAAGACAGTG+GGG | - | chr3.4:80515994-80516013 | None:intergenic | 35.0% | |
| GGCTTGAAATTAAAGACAGT+GGG | - | chr3.4:80515995-80516014 | None:intergenic | 35.0% | |
| GGGAACAAGTATATGAAATC+TGG | - | chr3.4:80513005-80513024 | None:intergenic | 35.0% | |
| TACAAAGGAGCCAAAATGTA+AGG | - | chr3.4:80516793-80516812 | None:intergenic | 35.0% | |
| TACCTATCAAAGGAAAGGAA+AGG | - | chr3.4:80512560-80512579 | None:intergenic | 35.0% | |
| TACTATGATCACTTCTGTGA+GGG | - | chr3.4:80516376-80516395 | None:intergenic | 35.0% | |
| TCTTAGTTGTGTCCTCAAAT+AGG | + | chr3.4:80516034-80516053 | MS.gene067073:intron | 35.0% | |
| TGTCGCAGAATCATTTACTT+GGG | + | chr3.4:80515061-80515080 | MS.gene067073:CDS | 35.0% | |
| TTAAGATGTGAAGGCAAACA+TGG | + | chr3.4:80516291-80516310 | MS.gene067073:intron | 35.0% | |
| TTATAGCCAGTCAAGATTTC+AGG | - | chr3.4:80513792-80513811 | None:intergenic | 35.0% | |
| TTGTCGCAGAATCATTTACT+TGG | + | chr3.4:80515060-80515079 | MS.gene067073:CDS | 35.0% | |
| TTGTTTCCTGCAGTCATAAA+GGG | + | chr3.4:80513410-80513429 | MS.gene067073:intron | 35.0% | |
| TTTGCCATAAACAACTGAAG+TGG | + | chr3.4:80513266-80513285 | MS.gene067073:intron | 35.0% | |
| ! | AAAAAGCGCAAACAAAAAGG+GGG | + | chr3.4:80515821-80515840 | MS.gene067073:intron | 35.0% |
| ! | AGAGTTGCTGATCTAGAATT+AGG | + | chr3.4:80516662-80516681 | MS.gene067073:intron | 35.0% |
| ! | ATGCTGGCTGATAAAATTGA+TGG | + | chr3.4:80515332-80515351 | MS.gene067073:CDS | 35.0% |
| ! | CATCATCTTTGTTTACATCG+TGG | - | chr3.4:80515424-80515443 | None:intergenic | 35.0% |
| ! | CTTCAAAGCTCAAGTTGTAA+AGG | + | chr3.4:80513330-80513349 | MS.gene067073:intron | 35.0% |
| ! | CTTTAATTTCAAGCCTGCTT+TGG | + | chr3.4:80516000-80516019 | MS.gene067073:intron | 35.0% |
| ! | GAAAAGGTTGTGATGATGTA+AGG | - | chr3.4:80514674-80514693 | None:intergenic | 35.0% |
| ! | GGGAACATTTTCTCTTTACT+AGG | + | chr3.4:80514124-80514143 | MS.gene067073:intron | 35.0% |
| ! | TGCTGGCTGATAAAATTGAT+GGG | + | chr3.4:80515333-80515352 | MS.gene067073:CDS | 35.0% |
| ! | TTCCTTTTGAGCAAGAATCT+TGG | + | chr3.4:80513087-80513106 | MS.gene067073:intron | 35.0% |
| !! | CAATATTTTGGATGGGGAAA+TGG | + | chr3.4:80517033-80517052 | MS.gene067073:CDS | 35.0% |
| !! | CACCTTCTTTCTTTGGAATT+AGG | + | chr3.4:80515743-80515762 | MS.gene067073:intron | 35.0% |
| !! | CCAACACCCTTTTAAAAGTA+TGG | - | chr3.4:80516618-80516637 | None:intergenic | 35.0% |
| !! | CCATACTTTTAAAAGGGTGT+TGG | + | chr3.4:80516615-80516634 | MS.gene067073:intron | 35.0% |
| !! | TAGTTAAGAACGGATTGTTC+AGG | - | chr3.4:80514475-80514494 | None:intergenic | 35.0% |
| !! | TCTACTAGGTAATGGGAAAT+TGG | + | chr3.4:80514073-80514092 | MS.gene067073:intron | 35.0% |
| !! | TGTTGGTAACAATAACTAGG+TGG | + | chr3.4:80516911-80516930 | MS.gene067073:intron | 35.0% |
| !!! | ACTATTTTTGCAGCTGTTCT+GGG | + | chr3.4:80513720-80513739 | MS.gene067073:intron | 35.0% |
| !!! | TTTTTTAGTAGTAAGGGCAG+GGG | + | chr3.4:80515921-80515940 | MS.gene067073:intron | 35.0% |
| AAGAGGATATTGTGTTAGGG+TGG | - | chr3.4:80515659-80515678 | None:intergenic | 40.0% | |
| AATGGAAGCTAGTCAAAGTG+AGG | + | chr3.4:80513995-80514014 | MS.gene067073:CDS | 40.0% | |
| ACCAAATTCCAGATTACCAG+GGG | - | chr3.4:80514391-80514410 | None:intergenic | 40.0% | |
| ACCCTTTCCTTTCCTTTGAT+AGG | + | chr3.4:80512555-80512574 | MS.gene067073:intron | 40.0% | |
| ACTATGATCACTTCTGTGAG+GGG | - | chr3.4:80516375-80516394 | None:intergenic | 40.0% | |
| AGAGGATATTGTGTTAGGGT+GGG | - | chr3.4:80515658-80515677 | None:intergenic | 40.0% | |
| AGGAGAGAACTACACTATGA+AGG | - | chr3.4:80515606-80515625 | None:intergenic | 40.0% | |
| ATCAGCAACTCTAACCATCA+TGG | - | chr3.4:80516654-80516673 | None:intergenic | 40.0% | |
| ATGGAAGCTAGTCAAAGTGA+GGG | + | chr3.4:80513996-80514015 | MS.gene067073:CDS | 40.0% | |
| CAAGAAATGTTTACGCCAAC+AGG | + | chr3.4:80513850-80513869 | MS.gene067073:CDS | 40.0% | |
| CTATCCTCACCTTCTTTCTT+TGG | + | chr3.4:80515736-80515755 | MS.gene067073:intron | 40.0% | |
| CTGTTGCTCTACTAGGTAAT+GGG | + | chr3.4:80514066-80514085 | MS.gene067073:intron | 40.0% | |
| CTGTTGGCGTAAACATTTCT+TGG | - | chr3.4:80513852-80513871 | None:intergenic | 40.0% | |
| CTTTAGCATTTCTTCCCTGT+TGG | - | chr3.4:80513868-80513887 | None:intergenic | 40.0% | |
| GAAACCAAAACTCCTAAGTG+AGG | + | chr3.4:80512585-80512604 | MS.gene067073:CDS | 40.0% | |
| GACCAAATTCCAGATTACCA+GGG | - | chr3.4:80514392-80514411 | None:intergenic | 40.0% | |
| GAGACAGAAAGAATTGCATC+AGG | - | chr3.4:80515776-80515795 | None:intergenic | 40.0% | |
| GATAGTCATGCTCATGATCT+AGG | + | chr3.4:80516490-80516509 | MS.gene067073:intron | 40.0% | |
| GCTAATTCCTATTTGTCCAC+TGG | + | chr3.4:80513149-80513168 | MS.gene067073:intron | 40.0% | |
| GTACTATGATCACTTCTGTG+AGG | - | chr3.4:80516377-80516396 | None:intergenic | 40.0% | |
| GTCTCACATTTGAGTCCAAT+AGG | + | chr3.4:80515791-80515810 | MS.gene067073:intron | 40.0% | |
| GTGGACAAATAGGAATTAGC+AGG | - | chr3.4:80513149-80513168 | None:intergenic | 40.0% | |
| TAGGACAGAACCATTGTTTC+CGG | - | chr3.4:80513910-80513929 | None:intergenic | 40.0% | |
| TCAATTTGCAACCAAGCGAT+TGG | - | chr3.4:80514519-80514538 | None:intergenic | 40.0% | |
| TCTAGCGAAGAGAATGAAGA+CGG | + | chr3.4:80517142-80517161 | MS.gene067073:CDS | 40.0% | |
| TCTGGACAATTTATGTGACC+TGG | + | chr3.4:80515873-80515892 | MS.gene067073:intron | 40.0% | |
| TCTGTTGCTCTACTAGGTAA+TGG | + | chr3.4:80514065-80514084 | MS.gene067073:intron | 40.0% | |
| TGAGCATGACTATCCAAACA+CGG | - | chr3.4:80516484-80516503 | None:intergenic | 40.0% | |
| TGCTAAACCAGTGGACAAAT+AGG | - | chr3.4:80513159-80513178 | None:intergenic | 40.0% | |
| TGTCTACACATTAGCTGCTT+GGG | + | chr3.4:80517102-80517121 | MS.gene067073:CDS | 40.0% | |
| TGTTTCCTGCAGTCATAAAG+GGG | + | chr3.4:80513411-80513430 | MS.gene067073:intron | 40.0% | |
| TTAATTGTCAATGAAGGGGC+TGG | + | chr3.4:80514038-80514057 | MS.gene067073:CDS | 40.0% | |
| TTTCAGTCAGGATTTGAACC+CGG | + | chr3.4:80514444-80514463 | MS.gene067073:intron | 40.0% | |
| TTTCCATAGACTCCTCACTT+AGG | - | chr3.4:80512600-80512619 | None:intergenic | 40.0% | |
| ! | ATTTTCTAGGTTACCTGTGG+AGG | + | chr3.4:80513554-80513573 | MS.gene067073:intron | 40.0% |
| ! | CACTAGAATACCAGTTTGCT+GGG | - | chr3.4:80517077-80517096 | None:intergenic | 40.0% |
| ! | CTGGTAATCTGGAATTTGGT+CGG | + | chr3.4:80514391-80514410 | MS.gene067073:intron | 40.0% |
| ! | GAAACAATGGTTCTGTCCTA+TGG | + | chr3.4:80513910-80513929 | MS.gene067073:CDS | 40.0% |
| ! | GACATTTTCTAGGTTACCTG+TGG | + | chr3.4:80513551-80513570 | MS.gene067073:intron | 40.0% |
| ! | GTTGTTTCCTGCAGTCATAA+AGG | + | chr3.4:80513409-80513428 | MS.gene067073:intron | 40.0% |
| ! | TCAAGCGCTTTTCCTGTTTT+CGG | - | chr3.4:80515361-80515380 | None:intergenic | 40.0% |
| ! | TGGTAATCTGGAATTTGGTC+GGG | + | chr3.4:80514392-80514411 | MS.gene067073:intron | 40.0% |
| !! | AATTGATGGGTACCGAAAAC+AGG | + | chr3.4:80515346-80515365 | MS.gene067073:CDS | 40.0% |
| !! | ATTCATAAACATGGACTGGG+AGG | + | chr3.4:80512676-80512695 | MS.gene067073:CDS | 40.0% |
| !! | TCGTATTTTTGTGACCTTGC+AGG | - | chr3.4:80516571-80516590 | None:intergenic | 40.0% |
| !!! | ACTTTTAAAAGGGTGTTGGG+AGG | + | chr3.4:80516619-80516638 | MS.gene067073:intron | 40.0% |
| !!! | CGCTTTTTTATAGGGCCTAT+TGG | - | chr3.4:80515809-80515828 | None:intergenic | 40.0% |
| !!! | CTTTTAAAAGGGTGTTGGGA+GGG | + | chr3.4:80516620-80516639 | MS.gene067073:intron | 40.0% |
| !!! | GACTATTTTTGCAGCTGTTC+TGG | + | chr3.4:80513719-80513738 | MS.gene067073:intron | 40.0% |
| ACATACCAATAGCAGCTGTG+TGG | - | chr3.4:80513592-80513611 | None:intergenic | 45.0% | |
| ACTCCTAAGTGAGGAGTCTA+TGG | + | chr3.4:80512594-80512613 | MS.gene067073:CDS | 45.0% | |
| AGATACCCCCAATGAGTCAA+TGG | + | chr3.4:80515578-80515597 | MS.gene067073:intron | 45.0% | |
| ATGACTGCATATACCTCCCA+TGG | - | chr3.4:80515314-80515333 | None:intergenic | 45.0% | |
| ATGTCACATCTGCTTCTACG+AGG | + | chr3.4:80513759-80513778 | MS.gene067073:CDS | 45.0% | |
| CAAGCAGCTAATGTGTAGAC+AGG | - | chr3.4:80517103-80517122 | None:intergenic | 45.0% | |
| CATACCAATAGCAGCTGTGT+GGG | - | chr3.4:80513591-80513610 | None:intergenic | 45.0% | |
| CCACTAGAATACCAGTTTGC+TGG | - | chr3.4:80517078-80517097 | None:intergenic | 45.0% | |
| CCAGCAAACTGGTATTCTAG+TGG | + | chr3.4:80517075-80517094 | MS.gene067073:CDS | 45.0% | |
| CGACCAAATTCCAGATTACC+AGG | - | chr3.4:80514393-80514412 | None:intergenic | 45.0% | |
| CTCTTCGCTAGAAAGAAGCA+TGG | - | chr3.4:80517134-80517153 | None:intergenic | 45.0% | |
| CTGTCTACACATTAGCTGCT+TGG | + | chr3.4:80517101-80517120 | MS.gene067073:CDS | 45.0% | |
| GAAAGAATTGCATCAGGTGC+TGG | - | chr3.4:80515770-80515789 | None:intergenic | 45.0% | |
| GAGCAACCTGAAATCTTGAC+TGG | + | chr3.4:80513783-80513802 | MS.gene067073:CDS | 45.0% | |
| GAGGATATTGTGTTAGGGTG+GGG | - | chr3.4:80515657-80515676 | None:intergenic | 45.0% | |
| GAGTTCCTTACAACCAAAGC+AGG | - | chr3.4:80516016-80516035 | None:intergenic | 45.0% | |
| GGTGATTCTGTTGCTCTACT+AGG | + | chr3.4:80514059-80514078 | MS.gene067073:CDS | 45.0% | |
| TCAAGCCTGCTTTGGTTGTA+AGG | + | chr3.4:80516008-80516027 | MS.gene067073:intron | 45.0% | |
| TCACACTTATGCCGTTCTGT+TGG | + | chr3.4:80516894-80516913 | MS.gene067073:intron | 45.0% | |
| TCTAGTTGCTGCAAAGTCTG+TGG | - | chr3.4:80515535-80515554 | None:intergenic | 45.0% | |
| TGACTGCATATACCTCCCAT+GGG | - | chr3.4:80515313-80515332 | None:intergenic | 45.0% | |
| TGATCTGCTAGGATGCTAGA+AGG | + | chr3.4:80516138-80516157 | MS.gene067073:intron | 45.0% | |
| TGCGTGGTCGAAAAATCACT+AGG | - | chr3.4:80513485-80513504 | None:intergenic | 45.0% | |
| TGGGGATTTGAGAGTAAGGA+AGG | - | chr3.4:80515639-80515658 | None:intergenic | 45.0% | |
| ! | AACAGCAGTTGGTATAGGAC+TGG | + | chr3.4:80515128-80515147 | MS.gene067073:CDS | 45.0% |
| ! | ACGGATTGTTCAGGAGAAAC+CGG | - | chr3.4:80514466-80514485 | None:intergenic | 45.0% |
| ! | CTGATCTAGAATTAGGCCTC+AGG | + | chr3.4:80516669-80516688 | MS.gene067073:intron | 45.0% |
| ! | CTTCATACTGGAGGCACATT+GGG | + | chr3.4:80517181-80517200 | MS.gene067073:CDS | 45.0% |
| ! | GAAGTGGTGATGCTTCATAC+TGG | + | chr3.4:80517169-80517188 | MS.gene067073:CDS | 45.0% |
| ! | GACTCCTCACTTAGGAGTTT+TGG | - | chr3.4:80512592-80512611 | None:intergenic | 45.0% |
| ! | GATTCGTTCAAGCGCTTTTC+AGG | + | chr3.4:80512439-80512458 | MS.gene067073:CDS | 45.0% |
| ! | TCCAGATGCATTGATGTCGA+GGG | - | chr3.4:80515859-80515878 | None:intergenic | 45.0% |
| ! | TTGTTGCACCCGCTGATTAA+TGG | + | chr3.4:80512793-80512812 | MS.gene067073:CDS | 45.0% |
| ! | TTTGTTGTGGATGCTGGTAC+TGG | + | chr3.4:80515102-80515121 | MS.gene067073:CDS | 45.0% |
| !! | AAGATGATGGGATTGTGCAC+TGG | + | chr3.4:80515435-80515454 | MS.gene067073:CDS | 45.0% |
| !! | AAGGAGCCATTGACTCATTG+GGG | - | chr3.4:80515587-80515606 | None:intergenic | 45.0% |
| !! | AAGGGCTGTGAAGTTTGTTG+TGG | + | chr3.4:80515089-80515108 | MS.gene067073:CDS | 45.0% |
| !! | AGATGATGGGATTGTGCACT+GGG | + | chr3.4:80515436-80515455 | MS.gene067073:CDS | 45.0% |
| !! | GAAGGAGCCATTGACTCATT+GGG | - | chr3.4:80515588-80515607 | None:intergenic | 45.0% |
| !! | GTAAGGAAGGTTTGGCTTTG+AGG | - | chr3.4:80515626-80515645 | None:intergenic | 45.0% |
| !! | GTGAAGTTTGTTGTGGATGC+TGG | + | chr3.4:80515096-80515115 | MS.gene067073:CDS | 45.0% |
| !! | TGAAGGAGCCATTGACTCAT+TGG | - | chr3.4:80515589-80515608 | None:intergenic | 45.0% |
| AAAGAGCTATGCCGAGTCAG+TGG | + | chr3.4:80513884-80513903 | MS.gene067073:CDS | 50.0% | |
| ACCAAGCGATTGGACTCAAG+TGG | - | chr3.4:80514509-80514528 | None:intergenic | 50.0% | |
| ACCACTTGAGTCCAATCGCT+TGG | + | chr3.4:80514505-80514524 | MS.gene067073:intron | 50.0% | |
| ACCCTCGACATCAATGCATC+TGG | + | chr3.4:80515855-80515874 | MS.gene067073:intron | 50.0% | |
| AGGGTGGGGATTTGAGAGTA+AGG | - | chr3.4:80515643-80515662 | None:intergenic | 50.0% | |
| CACATTAGCTGCTTGGGAAG+CGG | + | chr3.4:80517108-80517127 | MS.gene067073:CDS | 50.0% | |
| CAGCAAATTGCCCAGCAAAC+TGG | + | chr3.4:80517064-80517083 | MS.gene067073:CDS | 50.0% | |
| CCATAAGCATAGCTCCTGCA+AGG | + | chr3.4:80516554-80516573 | MS.gene067073:intron | 50.0% | |
| CCTGCAGTCATAAAGGGGAA+GGG | + | chr3.4:80513416-80513435 | MS.gene067073:intron | 50.0% | |
| CCTTGCAGGAGCTATGCTTA+TGG | - | chr3.4:80516557-80516576 | None:intergenic | 50.0% | |
| CGGATTGTTCAGGAGAAACC+GGG | - | chr3.4:80514465-80514484 | None:intergenic | 50.0% | |
| CTGCAGTCATAAAGGGGAAG+GGG | + | chr3.4:80513417-80513436 | MS.gene067073:intron | 50.0% | |
| GAATGAAGACGGAGCAGAAG+TGG | + | chr3.4:80517153-80517172 | MS.gene067073:CDS | 50.0% | |
| TACCTTGTAGGGGTAAGACG+TGG | + | chr3.4:80517335-80517354 | MS.gene067073:intron | 50.0% | |
| TCCTGCAGTCATAAAGGGGA+AGG | + | chr3.4:80513415-80513434 | MS.gene067073:intron | 50.0% | |
| TGCAGTCATAAAGGGGAAGG+GGG | + | chr3.4:80513418-80513437 | MS.gene067073:intron | 50.0% | |
| ! | ATCTGGAATTTGGTCGGGAG+AGG | + | chr3.4:80514397-80514416 | MS.gene067073:intron | 50.0% |
| ! | ATTGTTTCCGGCCACTGACT+CGG | - | chr3.4:80513898-80513917 | None:intergenic | 50.0% |
| ! | CACATTGGGCTTGTTTGGGT+TGG | + | chr3.4:80517195-80517214 | MS.gene067073:CDS | 50.0% |
| ! | GAGGCACATTGGGCTTGTTT+GGG | + | chr3.4:80517191-80517210 | MS.gene067073:CDS | 50.0% |
| ! | GCCCCTGGTAATCTGGAATT+TGG | + | chr3.4:80514387-80514406 | MS.gene067073:intron | 50.0% |
| ! | GCTTCATACTGGAGGCACAT+TGG | + | chr3.4:80517180-80517199 | MS.gene067073:CDS | 50.0% |
| ! | GGAGGTATATGCAGTCATGC+TGG | + | chr3.4:80515316-80515335 | MS.gene067073:CDS | 50.0% |
| ! | GGCACAACAGCAGTTGGTAT+AGG | + | chr3.4:80515123-80515142 | MS.gene067073:CDS | 50.0% |
| ! | GTCCAGATGCATTGATGTCG+AGG | - | chr3.4:80515860-80515879 | None:intergenic | 50.0% |
| ! | GTGGTGATGCTTCATACTGG+AGG | + | chr3.4:80517172-80517191 | MS.gene067073:CDS | 50.0% |
| !! | AGGAGCCATTGACTCATTGG+GGG | - | chr3.4:80515586-80515605 | None:intergenic | 50.0% |
| !! | TTAAAAGGGTGTTGGGAGGG+AGG | + | chr3.4:80516623-80516642 | MS.gene067073:intron | 50.0% |
| AATAACCCTCCGGTTCCCAG+TGG | + | chr3.4:80514359-80514378 | MS.gene067073:intron | 55.0% | |
| AGCCACGTCTTACCCCTACA+AGG | - | chr3.4:80517340-80517359 | None:intergenic | 55.0% | |
| AGTGCCCACACAGCTGCTAT+TGG | + | chr3.4:80513584-80513603 | MS.gene067073:CDS | 55.0% | |
| CCAAACACGGCCATCTCTCT+TGG | - | chr3.4:80516471-80516490 | None:intergenic | 55.0% | |
| CCAAGAGAGATGGCCGTGTT+TGG | + | chr3.4:80516468-80516487 | MS.gene067073:intron | 55.0% | |
| CCCTTCCCCTTTATGACTGC+AGG | - | chr3.4:80513419-80513438 | None:intergenic | 55.0% | |
| GACTGGCAGCGCTTTGCTTA+GGG | + | chr3.4:80515145-80515164 | MS.gene067073:CDS | 55.0% | |
| GAGTCAGTGGCCGGAAACAA+TGG | + | chr3.4:80513897-80513916 | MS.gene067073:CDS | 55.0% | |
| GCTTCTGTGCAGACTCCCAT+GGG | + | chr3.4:80515295-80515314 | MS.gene067073:intron | 55.0% | |
| GGAAAGAGCCCCTGGTAATC+TGG | + | chr3.4:80514380-80514399 | MS.gene067073:intron | 55.0% | |
| TACCAGGGGCTCTTTCCACT+GGG | - | chr3.4:80514377-80514396 | None:intergenic | 55.0% | |
| TCTTTCCACTGGGAACCGGA+GGG | - | chr3.4:80514367-80514386 | None:intergenic | 55.0% | |
| TGATGGGATTGTGCACTGGG+TGG | + | chr3.4:80515439-80515458 | MS.gene067073:CDS | 55.0% | |
| TGCTTCTGTGCAGACTCCCA+TGG | + | chr3.4:80515294-80515313 | MS.gene067073:intron | 55.0% | |
| TTACCAGGGGCTCTTTCCAC+TGG | - | chr3.4:80514378-80514397 | None:intergenic | 55.0% | |
| ! | GGAGGCACATTGGGCTTGTT+TGG | + | chr3.4:80517190-80517209 | MS.gene067073:CDS | 55.0% |
| !! | GCTTGTTTGGGTTGGCACAG+AGG | + | chr3.4:80517203-80517222 | MS.gene067073:CDS | 55.0% |
| !! | GGTACTGGCACAACAGCAGT+TGG | + | chr3.4:80515117-80515136 | MS.gene067073:CDS | 55.0% |
| AGCTATGCCGAGTCAGTGGC+CGG | + | chr3.4:80513888-80513907 | MS.gene067073:CDS | 60.0% | |
| CTCTTTCCACTGGGAACCGG+AGG | - | chr3.4:80514368-80514387 | None:intergenic | 60.0% | |
| GGAGGGAGGCTTTGCCATGA+TGG | + | chr3.4:80516637-80516656 | MS.gene067073:intron | 60.0% | |
| GGCACTCTGACAACCTCCAC+AGG | - | chr3.4:80513570-80513589 | None:intergenic | 60.0% | |
| GGCAGCGCTTTGCTTAGGGT+GGG | + | chr3.4:80515149-80515168 | MS.gene067073:intron | 60.0% | |
| GGGCTCTTTCCACTGGGAAC+CGG | - | chr3.4:80514371-80514390 | None:intergenic | 60.0% | |
| TCTGTGCAGACTCCCATGGG+AGG | + | chr3.4:80515298-80515317 | MS.gene067073:intron | 60.0% | |
| TGGCAGCGCTTTGCTTAGGG+TGG | + | chr3.4:80515148-80515167 | MS.gene067073:intron | 60.0% | |
| TTCCCAGTGGAAAGAGCCCC+TGG | + | chr3.4:80514372-80514391 | MS.gene067073:intron | 60.0% | |
| ! | GGACTGGCAGCGCTTTGCTT+AGG | + | chr3.4:80515144-80515163 | MS.gene067073:CDS | 60.0% |
| !! | GCTGTTCTGGGTGCTGAGAG+AGG | + | chr3.4:80513732-80513751 | MS.gene067073:intron | 60.0% |
| CCTGGATGCGCGCTTTCCGA+AGG | + | chr3.4:80515891-80515910 | MS.gene067073:intron | 65.0% | |
| ! | CCTTCGGAAAGCGCGCATCC+AGG | - | chr3.4:80515894-80515913 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 80512425 | 80517363 | 80512425 | ID=MS.gene067073 |
| chr3.4 | mRNA | 80512425 | 80517363 | 80512425 | ID=MS.gene067073.t1;Parent=MS.gene067073 |
| chr3.4 | exon | 80512425 | 80512460 | 80512425 | ID=MS.gene067073.t1.exon1;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80512425 | 80512460 | 80512425 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80512577 | 80512879 | 80512577 | ID=MS.gene067073.t1.exon2;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80512577 | 80512879 | 80512577 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80513563 | 80513605 | 80513563 | ID=MS.gene067073.t1.exon3;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80513563 | 80513605 | 80513563 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80513733 | 80514080 | 80513733 | ID=MS.gene067073.t1.exon4;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80513733 | 80514080 | 80513733 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80515037 | 80515166 | 80515037 | ID=MS.gene067073.t1.exon5;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80515037 | 80515166 | 80515037 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80515307 | 80515480 | 80515307 | ID=MS.gene067073.t1.exon6;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80515307 | 80515480 | 80515307 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80517027 | 80517224 | 80517027 | ID=MS.gene067073.t1.exon7;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80517027 | 80517224 | 80517027 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| chr3.4 | exon | 80517345 | 80517363 | 80517345 | ID=MS.gene067073.t1.exon8;Parent=MS.gene067073.t1 |
| chr3.4 | CDS | 80517345 | 80517363 | 80517345 | ID=cds.MS.gene067073.t1;Parent=MS.gene067073.t1 |
| Gene Sequence |
| Protein sequence |
