AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068742

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068742.t1 MTR_2g085330 96.388 609 22 0 1 609 1 609 0.0 1180
MS.gene068742.t1 MTR_2g085330 96.388 609 22 0 1 609 66 674 0.0 1177
MS.gene068742.t1 MTR_4g132200 76.325 604 133 2 16 609 3 606 0.0 855
MS.gene068742.t1 MTR_2g090520 30.088 339 195 4 80 381 38 371 6.83e-32 128
MS.gene068742.t1 MTR_2g090520 35.326 184 118 1 199 381 45 228 2.57e-27 111
MS.gene068742.t1 MTR_1g035040 26.396 591 340 17 83 604 712 1276 8.94e-27 116
MS.gene068742.t1 MTR_0370s0010 30.748 361 171 11 76 383 11 345 4.18e-26 110
MS.gene068742.t1 MTR_2g090525 35.366 164 106 0 220 383 47 210 3.68e-24 101
MS.gene068742.t1 MTR_2g090525 35.366 164 106 0 220 383 48 211 4.07e-24 101
MS.gene068742.t1 MTR_2g090525 35.366 164 106 0 220 383 121 284 2.08e-23 101
MS.gene068742.t1 MTR_2g090520 26.923 312 185 5 80 353 38 344 6.65e-18 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068742.t1 AT4G27500 51.629 614 258 14 1 593 1 596 2.47e-161 475
MS.gene068742.t1 AT4G27500 52.381 504 204 14 1 483 1 489 3.66e-153 451
MS.gene068742.t1 AT3G15340 36.296 540 314 8 62 589 49 570 1.05e-61 215
MS.gene068742.t1 AT3G15340 36.296 540 314 8 62 589 49 570 1.05e-61 215
MS.gene068742.t1 AT5G36780 36.347 531 274 10 82 589 68 557 2.75e-60 211
MS.gene068742.t1 AT5G36690 36.347 531 274 10 82 589 68 557 2.75e-60 211
MS.gene068742.t1 AT3G15340 36.324 457 262 7 145 589 11 450 2.02e-47 173
MS.gene068742.t1 AT1G53110 36.571 350 178 6 248 590 107 419 3.13e-46 169

Find 151 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCAATTTGCTTGATTT+TGG 0.111540 2.3:-18700905 None:intergenic
TTCATCTCTTTCAACTTTGC+TGG 0.226290 2.3:-18702267 None:intergenic
CAAATCCCTCCCTTTGGATT+TGG 0.231361 2.3:-18702169 None:intergenic
AACTTTGCTGGATCAATTTC+AGG 0.232710 2.3:-18702255 None:intergenic
CATTCTTCAGCAACATCTTT+CGG 0.267373 2.3:-18699450 None:intergenic
AGCAACATCTTTCGGGGTAT+TGG 0.273346 2.3:-18699442 None:intergenic
CAGATCAATCTTAGCTTTGA+TGG 0.282733 2.3:-18699535 None:intergenic
CTTGGTCCTCATTGCAGAAT+TGG 0.291841 2.3:-18700666 None:intergenic
TTCCGCTTCAGGATAGCTTT+TGG 0.293390 2.3:-18703018 None:intergenic
ATTCTTCAGCAACATCTTTC+GGG 0.294393 2.3:-18699449 None:intergenic
CTGCAGCTTCCTGTTCCTCC+TGG 0.295012 2.3:-18702870 None:intergenic
GCAGCTTATAGGTGGGGATT+TGG 0.308350 2.3:+18700849 MS.gene068742:intron
GGGACGGGCGCATGAGGAAC+TGG 0.314104 2.3:+18702016 MS.gene068742:CDS
CTTCCTTTCAGCAGCAAGCT+TGG 0.352645 2.3:-18702313 None:intergenic
TTGCTAATCCTGATGCTGTT+GGG 0.354733 2.3:+18703081 MS.gene068742:CDS
TCAGGTTCAGCAGCAGGTTT+CGG 0.355438 2.3:-18702063 None:intergenic
CCTCAAGCTGTTTGATTTCA+CGG 0.356491 2.3:-18700622 None:intergenic
AGTCCAACAATGACTTGCTT+TGG 0.356615 2.3:+18703043 MS.gene068742:CDS
TGCAGCTTCCTGTTCCTCCT+GGG 0.369455 2.3:-18702869 None:intergenic
TGAGCCTCTGCAGCAGGCAC+TGG 0.386505 2.3:+18700345 MS.gene068742:CDS
ATCTTACCTTAACCTGGTCT+TGG 0.388792 2.3:-18700721 None:intergenic
ACCAAGTTGCATGATACTAT+TGG 0.389606 2.3:+18700683 MS.gene068742:CDS
CAATTCAAATAATGCTGGTC+GGG 0.390770 2.3:+18700378 MS.gene068742:CDS
TGAAACTTTGCCAGCTCAAA+AGG 0.391668 2.3:+18702143 MS.gene068742:CDS
CAAATCCAAAGGGAGGGATT+TGG 0.392397 2.3:+18702170 MS.gene068742:CDS
TGCCACTCCCCAGGAGGAAC+AGG 0.395697 2.3:+18702861 MS.gene068742:CDS
TCCATGTGAGCCAAACTTGA+TGG 0.400631 2.3:-18699379 None:intergenic
TGCTGCCAAATCCCTCCCTT+TGG 0.402163 2.3:-18702175 None:intergenic
TGAGCTGGCAAAGTTTCAAC+TGG 0.408310 2.3:-18702138 None:intergenic
TGGAAAGCTGGAGAAAGATC+TGG 0.412718 2.3:+18699344 MS.gene068742:CDS
TGTACGACTTTGGTAGAAAT+AGG 0.413785 2.3:-18701671 None:intergenic
CTTGCTAATCCTGATGCTGT+TGG 0.420732 2.3:+18703080 MS.gene068742:CDS
AAGAAAGCAAAGAAGAAGTC+TGG 0.421019 2.3:+18702832 MS.gene068742:CDS
GAAGGCTTAGGCGCTTCCTT+TGG 0.421567 2.3:-18702114 None:intergenic
AGCTATGTCGGTTGAGGTTG+TGG 0.422235 2.3:+18699248 None:intergenic
TGGTCTTGGATGGTATCTTT+CGG 0.424912 2.3:-18700707 None:intergenic
TTTCCCAGTGCCTGCTGCAG+AGG 0.426953 2.3:-18700349 None:intergenic
ATGCAAGCCCCAACAGCATC+AGG 0.437559 2.3:-18703089 None:intergenic
GCTGGTGAGACCATCAAGTT+TGG 0.437796 2.3:+18699369 MS.gene068742:CDS
CCAAGTTGCATGATACTATT+GGG 0.439438 2.3:+18700684 MS.gene068742:CDS
GCAGTTCTGCCTGCAGAGAC+TGG 0.443782 2.3:-18700954 None:intergenic
CAAATAATGCTGGTCGGGGC+GGG 0.455885 2.3:+18700383 MS.gene068742:CDS
AGCAGCCAGCTCACGTGCCT+TGG 0.460860 2.3:-18701701 None:intergenic
TGGAGCTGCTGCCACTCCCC+AGG 0.461464 2.3:+18702852 MS.gene068742:CDS
TGGATATGAGGCAGCTGAGT+AGG 0.465768 2.3:+18701995 MS.gene068742:CDS
ACCATCAAGTTTGGCTCACA+TGG 0.470558 2.3:+18699378 MS.gene068742:CDS
TGCTAATCCTGATGCTGTTG+GGG 0.471387 2.3:+18703082 MS.gene068742:CDS
CCCAATAGTATCATGCAACT+TGG 0.473579 2.3:-18700684 None:intergenic
CGAGGCAACTGAACAAGAAA+AGG 0.475621 2.3:+18702897 MS.gene068742:CDS
AGATTCTAAGAGAGGACAAC+AGG 0.475720 2.3:+18700284 MS.gene068742:CDS
TTCCTGTTCCTCCTGGGGAG+TGG 0.477279 2.3:-18702863 None:intergenic
TAAGATTGATCTGCTTGATA+AGG 0.478327 2.3:+18699545 MS.gene068742:CDS
AGTCCAAAGCAAGTCATTGT+TGG 0.480935 2.3:-18703046 None:intergenic
AGCAGCTCTCAAAGCACAAA+AGG 0.480940 2.3:+18702365 MS.gene068742:CDS
CCAATGGATAACGGTGTTGA+AGG 0.480966 2.3:+18699291 MS.gene068742:CDS
GGAGATTGAGCCTCTGCAGC+AGG 0.481162 2.3:+18700339 MS.gene068742:CDS
CAAACCTGTTGCTCTTGAAA+AGG 0.483744 2.3:+18699317 MS.gene068742:CDS
TGCAAGCTGTCACTCAGAAG+AGG 0.485856 2.3:+18700974 MS.gene068742:CDS
CGAAAGATGTTGCTGAAGAA+TGG 0.485859 2.3:+18699451 MS.gene068742:CDS
TCTGACCAAGGCACGTGAGC+TGG 0.488490 2.3:+18701696 MS.gene068742:CDS
TGGAGTGAAGAAAGAGAGAC+AGG 0.490509 2.3:+18700873 MS.gene068742:CDS
AATGCCTCAGGTTCAGCAGC+AGG 0.491219 2.3:-18702069 None:intergenic
GTGGGATTCGAGATGGTTCA+AGG 0.491500 2.3:+18699267 MS.gene068742:CDS
TACCATCCAAGACCAGGTTA+AGG 0.491989 2.3:+18700715 MS.gene068742:CDS
TGAAAAGGAGAATGGAAAGC+TGG 0.492438 2.3:+18699332 MS.gene068742:CDS
TCACAAAGGAAAGCAGTGTC+AGG 0.492731 2.3:+18702962 MS.gene068742:CDS
AACAATGACTTGCTTTGGAC+TGG 0.494249 2.3:+18703048 MS.gene068742:CDS
GAAAGAGATGAAAAGAGAAG+AGG 0.494570 2.3:+18702278 MS.gene068742:CDS
GGAAGCTGAGAAGAAACTTA+AGG 0.497358 2.3:+18702386 MS.gene068742:CDS
GTTGCTCTTGAAAAGGAGAA+TGG 0.498587 2.3:+18699324 MS.gene068742:CDS
GGCAAAGTTTCAACTGGAGA+AGG 0.502305 2.3:-18702132 None:intergenic
CTGGGATGAAAAGCCACTGC+TGG 0.503793 2.3:+18702035 MS.gene068742:CDS
TCAATCTTAGCTTTGATGGA+TGG 0.508062 2.3:-18699531 None:intergenic
TTGATGGATGGATCGTCATA+AGG 0.508832 2.3:-18699519 None:intergenic
GAGCCTCTGCAGCAGGCACT+GGG 0.509435 2.3:+18700346 MS.gene068742:CDS
AGAAAGAGAGACAGGCGATT+CGG 0.510994 2.3:+18700881 MS.gene068742:CDS
GTGAGAAATTCATGTCACTT+TGG 0.511048 2.3:+18701920 MS.gene068742:CDS
CGCTGCCCCAGTGAAGGAAA+AGG 0.514924 2.3:+18702939 MS.gene068742:CDS
CTGAAGCGCTGAAGGCAAAG+AGG 0.515275 2.3:+18699604 MS.gene068742:CDS
CGTGAAATCAAACAGCTTGA+GGG 0.518878 2.3:+18700623 MS.gene068742:CDS
CTGAGAAAACAGCGTGATGA+GGG 0.528558 2.3:+18701024 MS.gene068742:CDS
TCAAACAGCTTGAGGGGACA+AGG 0.528670 2.3:+18700630 MS.gene068742:CDS
CATTGATATCCAGTCTCTGC+AGG 0.528692 2.3:+18700945 MS.gene068742:CDS
GAATGAATCTGCTTAGGTGC+AGG 0.530702 2.3:-18699474 None:intergenic
GGATATGAGGCAGCTGAGTA+GGG 0.531918 2.3:+18701996 MS.gene068742:CDS
AAGCCAAGCTTGCTGCTGAA+AGG 0.532045 2.3:+18702310 MS.gene068742:CDS
TCAGATTAAGATTCTAAGAG+AGG 0.532456 2.3:+18700276 MS.gene068742:CDS
TGAGGTTGTGGGATTCGAGA+TGG 0.533216 2.3:+18699260 MS.gene068742:CDS
TACCTTAACCTGGTCTTGGA+TGG 0.533508 2.3:-18700717 None:intergenic
TCAAATAATGCTGGTCGGGG+CGG 0.535701 2.3:+18700382 MS.gene068742:CDS
GCTATGTCGGTTGAGGTTGT+GGG 0.536778 2.3:+18699249 None:intergenic
TGGTCAGAAGTGTACGACTT+TGG 0.536978 2.3:-18701681 None:intergenic
CCTTCAACACCGTTATCCAT+TGG 0.538584 2.3:-18699291 None:intergenic
CTGGAGAAAGATCTGGGAGC+TGG 0.541553 2.3:+18699351 MS.gene068742:CDS
TTTCTTGCAGCTTATAGGTG+GGG 0.542002 2.3:+18700843 MS.gene068742:intron
CTTATAGGTGGGGATTTGGA+TGG 0.542716 2.3:+18700853 MS.gene068742:CDS
TCAGATCACTGAAGCGCTGA+AGG 0.551190 2.3:+18699596 MS.gene068742:CDS
AGTTGGAGCTATGTCGGTTG+AGG 0.551195 2.3:+18699242 None:intergenic
CTGCGCAATTCAAATAATGC+TGG 0.554404 2.3:+18700373 MS.gene068742:CDS
GCAGCTTCCTGTTCCTCCTG+GGG 0.556632 2.3:-18702868 None:intergenic
GGACGGGCGCATGAGGAACT+GGG 0.558746 2.3:+18702017 MS.gene068742:CDS
TGAGGCCGCTGCCCCAGTGA+AGG 0.558876 2.3:+18702933 MS.gene068742:CDS
ATGAGGCAGCTGAGTAGGGA+CGG 0.559224 2.3:+18702000 MS.gene068742:CDS
AAGTATATCTTACCTTAACC+TGG 0.559544 2.3:-18700727 None:intergenic
TGGAGACGAATCTGCGAAAG+CGG 0.559547 2.3:+18699398 MS.gene068742:CDS
GCAGCAGGAGTGTCCTTGTG+AGG 0.562150 2.3:-18702225 None:intergenic
GGAAAGCTGGAGAAAGATCT+GGG 0.565324 2.3:+18699345 MS.gene068742:CDS
TGAGGCAGCTGAGTAGGGAC+GGG 0.566320 2.3:+18702001 MS.gene068742:CDS
AGACTGGATATCAATGTCAA+TGG 0.567778 2.3:-18700938 None:intergenic
TGAGTAGGGACGGGCGCATG+AGG 0.567990 2.3:+18702010 MS.gene068742:CDS
GTTCAAGGACCAATGGATAA+CGG 0.571232 2.3:+18699282 MS.gene068742:CDS
GTTTCAACTGGAGAAGGCTT+AGG 0.571402 2.3:-18702126 None:intergenic
CCGTGAAATCAAACAGCTTG+AGG 0.572761 2.3:+18700622 MS.gene068742:CDS
GCAATTCAAATAATGCTGGT+CGG 0.573197 2.3:+18700377 MS.gene068742:CDS
TGAAGCGCTGAAGGCAAAGA+GGG 0.576662 2.3:+18699605 MS.gene068742:CDS
AAAAGGAAACCAAATCCAAA+GGG 0.578316 2.3:+18702160 MS.gene068742:CDS
AAGCCGAGCAAAAGCACCAG+AGG 0.579229 2.3:+18702990 MS.gene068742:CDS
CAAAAGGAAACCAAATCCAA+AGG 0.582095 2.3:+18702159 MS.gene068742:CDS
CGAGATGGTTCAAGGACCAA+TGG 0.588098 2.3:+18699275 MS.gene068742:CDS
AGCTGTCGCAAAACAGCCAA+AGG 0.590306 2.3:+18702098 MS.gene068742:CDS
TTCCAAAAGCTATCCTGAAG+CGG 0.593143 2.3:+18703016 MS.gene068742:CDS
AATTCAAATAATGCTGGTCG+GGG 0.593857 2.3:+18700379 MS.gene068742:CDS
GCTGAGAAAACAGCGTGATG+AGG 0.596421 2.3:+18701023 MS.gene068742:CDS
GGTTTCGGTTCTTCCAGCAG+TGG 0.599116 2.3:-18702048 None:intergenic
TTCTTCAGCAACATCTTTCG+GGG 0.600013 2.3:-18699448 None:intergenic
GGCAACTGAACAAGAAAAGG+TGG 0.602981 2.3:+18702900 MS.gene068742:CDS
GCAAGCTGTCACTCAGAAGA+GGG 0.603004 2.3:+18700975 MS.gene068742:CDS
GATCGTCATAAGGCCTGCAT+CGG 0.604055 2.3:-18699509 None:intergenic
AAATTCATGTCACTTTGGAA+CGG 0.608700 2.3:+18701925 MS.gene068742:CDS
TGATGAACTTTCACAGACAG+AGG 0.613362 2.3:+18701744 MS.gene068742:CDS
GGAAACCAAATCCAAAGGGA+GGG 0.616930 2.3:+18702164 MS.gene068742:CDS
GAAAGATACCATCCAAGACC+AGG 0.617247 2.3:+18700709 MS.gene068742:CDS
ACAGGAAGCTGCAGAACTCG+AGG 0.625503 2.3:+18702879 MS.gene068742:CDS
CGGGATCTTCTCATCTGAGG+AGG 0.625527 2.3:+18700402 MS.gene068742:CDS
TGCTGAAAGGAAGAAGAAGA+TGG 0.626148 2.3:+18702323 MS.gene068742:CDS
TTCATGTCACTTTGGAACGG+CGG 0.628904 2.3:+18701928 MS.gene068742:CDS
AGGAAACCAAATCCAAAGGG+AGG 0.629120 2.3:+18702163 MS.gene068742:CDS
AGCTGCTGCCACTCCCCAGG+AGG 0.630145 2.3:+18702855 MS.gene068742:CDS
GTGAAATCAAACAGCTTGAG+GGG 0.632326 2.3:+18700624 MS.gene068742:CDS
GGGCGGGATCTTCTCATCTG+AGG 0.634376 2.3:+18700399 MS.gene068742:CDS
CAAACAGCTTGAGGGGACAA+GGG 0.634784 2.3:+18700631 MS.gene068742:CDS
GAAACCTGCTGCTGAACCTG+AGG 0.636535 2.3:+18702065 MS.gene068742:CDS
GAGAAAACAGCGTGATGAGG+GGG 0.638113 2.3:+18701026 MS.gene068742:CDS
TGAATTTGAAAATCCTCACA+AGG 0.649669 2.3:+18702212 MS.gene068742:CDS
TGAGAAAACAGCGTGATGAG+GGG 0.650058 2.3:+18701025 MS.gene068742:CDS
AAGTCGTACACTTCTGACCA+AGG 0.666972 2.3:+18701684 MS.gene068742:CDS
GAATGCTCTCGTGCTGAATG+CGG 0.668048 2.3:-18700574 None:intergenic
AAAGGTGGATGATGTTGTTG+AGG 0.673026 2.3:+18702915 MS.gene068742:CDS
AGTGAAGGAAAAGGTCACAA+AGG 0.676979 2.3:+18702948 MS.gene068742:CDS
TCATTGCCAATTCTGCAATG+AGG 0.677058 2.3:+18700660 MS.gene068742:CDS
CAAGCTGTTTGATTTCACGG+AGG 0.715767 2.3:-18700619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCAAATTTATGTAT+AGG + chr2.3:18701212-18701231 MS.gene068742:intron 10.0%
!! AAACTAAAAATGTTTGTAAT+TGG + chr2.3:18702666-18702685 MS.gene068742:intron 15.0%
!! AATAAAATATTAAATCGCTA+CGG - chr2.3:18699768-18699787 None:intergenic 15.0%
!! AATATTGAAAATTAATGCAA+AGG + chr2.3:18699821-18699840 MS.gene068742:intron 15.0%
!! AGATGAAAATGTAAAAATAA+GGG - chr2.3:18701249-18701268 None:intergenic 15.0%
!! AGTAAAATAGTTTGATATTT+AGG - chr2.3:18699685-18699704 None:intergenic 15.0%
!! ATAAATTGTTTATCCAAATA+AGG + chr2.3:18702725-18702744 MS.gene068742:intron 15.0%
!! ATATTGAAAATTAATGCAAA+GGG + chr2.3:18699822-18699841 MS.gene068742:intron 15.0%
!! GTAAAATAGTTTGATATTTA+GGG - chr2.3:18699684-18699703 None:intergenic 15.0%
!! TCTTATTATAATTGCATATT+TGG + chr2.3:18700211-18700230 MS.gene068742:intron 15.0%
!!! AAAAAGTTCCTTTTTTTTAA+AGG - chr2.3:18700161-18700180 None:intergenic 15.0%
!!! AAAATCAAACAGAAAATTTT+AGG - chr2.3:18701437-18701456 None:intergenic 15.0%
!!! ATTACAAACATTTTTAGTTT+AGG - chr2.3:18702666-18702685 None:intergenic 15.0%
!!! TTACAAACATTTTTAGTTTA+GGG - chr2.3:18702665-18702684 None:intergenic 15.0%
!!! TTTTTTCTCCTTTAAAAAAA+AGG + chr2.3:18700150-18700169 MS.gene068742:intron 15.0%
!! AAAAATCTTCAAATAGTTGA+AGG - chr2.3:18702634-18702653 None:intergenic 20.0%
!! AAATTATATCTCAATGGAAT+AGG - chr2.3:18702779-18702798 None:intergenic 20.0%
!! AGGTAATTTAATTCTTGATT+TGG + chr2.3:18702406-18702425 MS.gene068742:intron 20.0%
!! CTAAATCCATAAAGATATTA+CGG - chr2.3:18702556-18702575 None:intergenic 20.0%
!! GAGATGAAAATGTAAAAATA+AGG - chr2.3:18701250-18701269 None:intergenic 20.0%
!! GTCATATTCAGAAATTAATT+TGG - chr2.3:18701628-18701647 None:intergenic 20.0%
!! TTGGATAAACAATTTATTCA+AGG - chr2.3:18702722-18702741 None:intergenic 20.0%
!!! AATTAGTGTAATTTGTAATG+AGG + chr2.3:18702696-18702715 MS.gene068742:intron 20.0%
!!! ATTTGATTGTGAATTTTTTC+TGG + chr2.3:18701147-18701166 MS.gene068742:intron 20.0%
!!! ATTTTACCGTAATATCTTTA+TGG + chr2.3:18702547-18702566 MS.gene068742:intron 20.0%
!!! CTATTTGAAGATTTTTAAGT+AGG + chr2.3:18702638-18702657 MS.gene068742:intron 20.0%
!!! TATTTTACTTGTTATTACTG+TGG + chr2.3:18699696-18699715 MS.gene068742:intron 20.0%
!!! TTTTGGAAATTATATCTCAA+TGG - chr2.3:18702785-18702804 None:intergenic 20.0%
!!! TTTTTTGTAAGTTTTGCTAT+TGG + chr2.3:18700748-18700767 MS.gene068742:intron 20.0%
! AACCTGTAAAATTAGTTCAA+AGG + chr2.3:18699957-18699976 MS.gene068742:intron 25.0%
! ACTATTAGTCAGATTAAATG+TGG - chr2.3:18701404-18701423 None:intergenic 25.0%
! CAAGAAAATTGAACATGTAA+AGG - chr2.3:18700830-18700849 None:intergenic 25.0%
! CCACATAAATATTCATTCTT+CGG + chr2.3:18701776-18701795 MS.gene068742:intron 25.0%
! CGAAGAATGAATATTTATGT+GGG - chr2.3:18701778-18701797 None:intergenic 25.0%
! GAAAGATTGAATACAAAATG+TGG + chr2.3:18701291-18701310 MS.gene068742:intron 25.0%
! GAGATATAATTTCCAAAATC+TGG + chr2.3:18702787-18702806 MS.gene068742:intron 25.0%
! TAAAAAGAATGAATCTGCTT+AGG - chr2.3:18699483-18699502 None:intergenic 25.0%
! TCAAATTTATGTATAGGATG+TGG + chr2.3:18701218-18701237 MS.gene068742:intron 25.0%
! TCAATATTAATTGACAACTC+AGG - chr2.3:18699809-18699828 None:intergenic 25.0%
! TTATATCTACATTAACTCGA+TGG - chr2.3:18699724-18699743 None:intergenic 25.0%
! TTGAACAATAAAACCCTTAA+CGG + chr2.3:18700034-18700053 MS.gene068742:intron 25.0%
!! CTTTTATGGATACAGATATA+TGG + chr2.3:18700542-18700561 MS.gene068742:intron 25.0%
!! TACAAAACAATTCCAGATTT+TGG - chr2.3:18702802-18702821 None:intergenic 25.0%
!! TCTTTTTGATGAGAAAATGA+AGG + chr2.3:18700318-18700337 MS.gene068742:CDS 25.0%
!!! AAAATCTGGAATTGTTTTGT+AGG + chr2.3:18702801-18702820 MS.gene068742:intron 25.0%
!!! ATCATCAATTTGCTTGATTT+TGG - chr2.3:18700908-18700927 None:intergenic 25.0%
AAAAGGAAACCAAATCCAAA+GGG + chr2.3:18702160-18702179 MS.gene068742:CDS 30.0%
AAGTATATCTTACCTTAACC+TGG - chr2.3:18700730-18700749 None:intergenic 30.0%
ACTAAAACACAAGTAAAGTG+AGG - chr2.3:18700481-18700500 None:intergenic 30.0%
ATCTCAATGGAATAGGAAAA+TGG - chr2.3:18702772-18702791 None:intergenic 30.0%
CCGAAGAATGAATATTTATG+TGG - chr2.3:18701779-18701798 None:intergenic 30.0%
CTAAAACACAAGTAAAGTGA+GGG - chr2.3:18700480-18700499 None:intergenic 30.0%
CTTCTATTCATCTGAAAATG+TGG + chr2.3:18701323-18701342 MS.gene068742:intron 30.0%
GAGATTCATAACATACGAAA+TGG - chr2.3:18700435-18700454 None:intergenic 30.0%
GATTAAATGTGGTATGATAC+TGG - chr2.3:18701393-18701412 None:intergenic 30.0%
GGAAGATTTAAAAACAGACT+GGG - chr2.3:18701361-18701380 None:intergenic 30.0%
GGGAAAAAAGGTAACAAATT+AGG + chr2.3:18702607-18702626 MS.gene068742:intron 30.0%
GTATGATACTGGATGAAAAT+CGG - chr2.3:18701382-18701401 None:intergenic 30.0%
TAAGATTGATCTGCTTGATA+AGG + chr2.3:18699545-18699564 MS.gene068742:CDS 30.0%
TGAATTTGAAAATCCTCACA+AGG + chr2.3:18702212-18702231 MS.gene068742:CDS 30.0%
! ATTTTACAGGTTACATCTCA+AGG - chr2.3:18699949-18699968 None:intergenic 30.0%
! CTCCTTTGAACTAATTTTAC+AGG - chr2.3:18699962-18699981 None:intergenic 30.0%
! GAAAAGAATTTTGTCATCGT+TGG + chr2.3:18701975-18701994 MS.gene068742:CDS 30.0%
! TATCCATAAAAGCATATCAG+TGG - chr2.3:18700534-18700553 None:intergenic 30.0%
! TCAATTTTCTTGCAGCTTAT+AGG + chr2.3:18700838-18700857 MS.gene068742:intron 30.0%
! TCAGATTAAGATTCTAAGAG+AGG + chr2.3:18700276-18700295 MS.gene068742:CDS 30.0%
!! AAATTCATGTCACTTTGGAA+CGG + chr2.3:18701925-18701944 MS.gene068742:CDS 30.0%
!! ATTTGCTTTTCTTCAGTCAA+TGG - chr2.3:18700599-18700618 None:intergenic 30.0%
!!! GGGTCAAATACTTTATTTTC+CGG + chr2.3:18699842-18699861 MS.gene068742:intron 30.0%
!!! TTTGTTACCTTTTTTCCCTA+TGG - chr2.3:18702605-18702624 None:intergenic 30.0%
AACTTTGCTGGATCAATTTC+AGG - chr2.3:18702258-18702277 None:intergenic 35.0%
AAGAAAGCAAAGAAGAAGTC+TGG + chr2.3:18702832-18702851 MS.gene068742:CDS 35.0%
AATTCAAATAATGCTGGTCG+GGG + chr2.3:18700379-18700398 MS.gene068742:CDS 35.0%
ACCAAGTTGCATGATACTAT+TGG + chr2.3:18700683-18700702 MS.gene068742:CDS 35.0%
ACTCTATTGTCTAGTCTCAA+AGG + chr2.3:18701079-18701098 MS.gene068742:intron 35.0%
AGACTGGATATCAATGTCAA+TGG - chr2.3:18700941-18700960 None:intergenic 35.0%
ATCGAGAATTACACATTGAC+GGG - chr2.3:18701515-18701534 None:intergenic 35.0%
ATTCTTCAGCAACATCTTTC+GGG - chr2.3:18699452-18699471 None:intergenic 35.0%
ATTCTTCGGAGCTATCAAAT+AGG + chr2.3:18701790-18701809 MS.gene068742:intron 35.0%
CAAAAGGAAACCAAATCCAA+AGG + chr2.3:18702159-18702178 MS.gene068742:CDS 35.0%
CAATTCAAATAATGCTGGTC+GGG + chr2.3:18700378-18700397 MS.gene068742:CDS 35.0%
CATCGAGAATTACACATTGA+CGG - chr2.3:18701516-18701535 None:intergenic 35.0%
CATTCTTCAGCAACATCTTT+CGG - chr2.3:18699453-18699472 None:intergenic 35.0%
CCAAGTTGCATGATACTATT+GGG + chr2.3:18700684-18700703 MS.gene068742:CDS 35.0%
CGACTCATCATTATTTGTGT+CGG + chr2.3:18702516-18702535 MS.gene068742:intron 35.0%
CGGAAGATTTAAAAACAGAC+TGG - chr2.3:18701362-18701381 None:intergenic 35.0%
GAAAGAGATGAAAAGAGAAG+AGG + chr2.3:18702278-18702297 MS.gene068742:CDS 35.0%
GACTCATCATTATTTGTGTC+GGG + chr2.3:18702517-18702536 MS.gene068742:intron 35.0%
GAGAAATCAGCAAAAAGAGA+TGG - chr2.3:18701838-18701857 None:intergenic 35.0%
GCAATTCAAATAATGCTGGT+CGG + chr2.3:18700377-18700396 MS.gene068742:CDS 35.0%
TCAGCAAGAAAAATCAAGCT+CGG + chr2.3:18699571-18699590 MS.gene068742:CDS 35.0%
TGTACGACTTTGGTAGAAAT+AGG - chr2.3:18701674-18701693 None:intergenic 35.0%
TTCAACCACAACCAATATCA+CGG - chr2.3:18701864-18701883 None:intergenic 35.0%
TTCATCTCTTTCAACTTTGC+TGG - chr2.3:18702270-18702289 None:intergenic 35.0%
! AATGTGCCTTTTACAGTTTG+CGG - chr2.3:18699915-18699934 None:intergenic 35.0%
! AATTTTCCCCTCTGATTGTA+GGG + chr2.3:18701898-18701917 MS.gene068742:intron 35.0%
! ATGTCAAGACATCCATGTTT+TGG + chr2.3:18700001-18700020 MS.gene068742:intron 35.0%
! ATTTTCTTGCAGCTTATAGG+TGG + chr2.3:18700841-18700860 MS.gene068742:intron 35.0%
! GTGAGAAATTCATGTCACTT+TGG + chr2.3:18701920-18701939 MS.gene068742:CDS 35.0%
! TAATTTTCCCCTCTGATTGT+AGG + chr2.3:18701897-18701916 MS.gene068742:intron 35.0%
! TCACCACTGATATGCTTTTA+TGG + chr2.3:18700528-18700547 MS.gene068742:intron 35.0%
! TCTTCTTTGCTTTCTTTTCG+AGG - chr2.3:18702828-18702847 None:intergenic 35.0%
! TTTTCTTGCAGCTTATAGGT+GGG + chr2.3:18700842-18700861 MS.gene068742:intron 35.0%
! TTTTGTCATCGTTGGATATG+AGG + chr2.3:18701983-18702002 MS.gene068742:CDS 35.0%
!! CAGATCAATCTTAGCTTTGA+TGG - chr2.3:18699538-18699557 None:intergenic 35.0%
!! CTAGTTTTTGTCATGCCATA+GGG + chr2.3:18702587-18702606 MS.gene068742:intron 35.0%
!! TCAATCTTAGCTTTGATGGA+TGG - chr2.3:18699534-18699553 None:intergenic 35.0%
!!! ACTTTATTTTCCGGTCTTGA+AGG + chr2.3:18699851-18699870 MS.gene068742:intron 35.0%
!!! CTTTATTTTCCGGTCTTGAA+GGG + chr2.3:18699852-18699871 MS.gene068742:intron 35.0%
AAAGGTGGATGATGTTGTTG+AGG + chr2.3:18702915-18702934 MS.gene068742:CDS 40.0%
AGCTATCAAATAGGCAACGA+TGG + chr2.3:18701799-18701818 MS.gene068742:intron 40.0%
AGTCCAAAGCAAGTCATTGT+TGG - chr2.3:18703049-18703068 None:intergenic 40.0%
AGTGAAGGAAAAGGTCACAA+AGG + chr2.3:18702948-18702967 MS.gene068742:CDS 40.0%
ATCTTACCTTAACCTGGTCT+TGG - chr2.3:18700724-18700743 None:intergenic 40.0%
ATTTCTCACCCTACAATCAG+AGG - chr2.3:18701909-18701928 None:intergenic 40.0%
CAAACCTGTTGCTCTTGAAA+AGG + chr2.3:18699317-18699336 MS.gene068742:CDS 40.0%
CCAAATAAGGCCTTACTAGT+GGG + chr2.3:18702738-18702757 MS.gene068742:intron 40.0%
CCCAATAGTATCATGCAACT+TGG - chr2.3:18700687-18700706 None:intergenic 40.0%
CGAAAGATGTTGCTGAAGAA+TGG + chr2.3:18699451-18699470 MS.gene068742:CDS 40.0%
CGTGAAATCAAACAGCTTGA+GGG + chr2.3:18700623-18700642 MS.gene068742:CDS 40.0%
CTGCGCAATTCAAATAATGC+TGG + chr2.3:18700373-18700392 MS.gene068742:CDS 40.0%
GAGAGTTAGATCATGACACT+AGG - chr2.3:18701606-18701625 None:intergenic 40.0%
GATTTCTCTGACCGTGATAT+TGG + chr2.3:18701850-18701869 MS.gene068742:intron 40.0%
GCTATCAAATAGGCAACGAT+GGG + chr2.3:18701800-18701819 MS.gene068742:intron 40.0%
GGAAGCTGAGAAGAAACTTA+AGG + chr2.3:18702386-18702405 MS.gene068742:CDS 40.0%
GGATTTAGATCCCACTAGTA+AGG - chr2.3:18702751-18702770 None:intergenic 40.0%
GTGAAATCAAACAGCTTGAG+GGG + chr2.3:18700624-18700643 MS.gene068742:CDS 40.0%
GTTCAAGGACCAATGGATAA+CGG + chr2.3:18699282-18699301 MS.gene068742:CDS 40.0%
GTTGCTCTTGAAAAGGAGAA+TGG + chr2.3:18699324-18699343 MS.gene068742:CDS 40.0%
TCACAATCAAATGCACCCTT+GGG - chr2.3:18701139-18701158 None:intergenic 40.0%
TCATTGCCAATTCTGCAATG+AGG + chr2.3:18700660-18700679 MS.gene068742:CDS 40.0%
TCCAAATAAGGCCTTACTAG+TGG + chr2.3:18702737-18702756 MS.gene068742:intron 40.0%
TCTTAGTGTCTCTTGACTCA+AGG + chr2.3:18699882-18699901 MS.gene068742:intron 40.0%
TGAAAAGGAGAATGGAAAGC+TGG + chr2.3:18699332-18699351 MS.gene068742:CDS 40.0%
TGAAACTTTGCCAGCTCAAA+AGG + chr2.3:18702143-18702162 MS.gene068742:CDS 40.0%
TGATGAACTTTCACAGACAG+AGG + chr2.3:18701744-18701763 MS.gene068742:CDS 40.0%
TGCTGAAAGGAAGAAGAAGA+TGG + chr2.3:18702323-18702342 MS.gene068742:CDS 40.0%
TGTCATGCCATAGGGAAAAA+AGG + chr2.3:18702595-18702614 MS.gene068742:intron 40.0%
TGTTGCACATGACTTGACTA+CGG + chr2.3:18700123-18700142 MS.gene068742:intron 40.0%
TTCACAATCAAATGCACCCT+TGG - chr2.3:18701140-18701159 None:intergenic 40.0%
TTCCAAAAGCTATCCTGAAG+CGG + chr2.3:18703016-18703035 MS.gene068742:CDS 40.0%
TTCTTCAGCAACATCTTTCG+GGG - chr2.3:18699451-18699470 None:intergenic 40.0%
TTGCTAATCCTGATGCTGTT+GGG + chr2.3:18703081-18703100 MS.gene068742:CDS 40.0%
TTTCTCACCCTACAATCAGA+GGG - chr2.3:18701908-18701927 None:intergenic 40.0%
TTTCTTGCAGCTTATAGGTG+GGG + chr2.3:18700843-18700862 MS.gene068742:intron 40.0%
! AGACAAAAACGTGCCGTTAA+GGG - chr2.3:18700050-18700069 None:intergenic 40.0%
! AGATTCTAAGAGAGGACAAC+AGG + chr2.3:18700284-18700303 MS.gene068742:CDS 40.0%
! CCTCAAGCTGTTTGATTTCA+CGG - chr2.3:18700625-18700644 None:intergenic 40.0%
! CTTTTTACTTTGTCCGATGC+AGG + chr2.3:18699496-18699515 MS.gene068742:CDS 40.0%
! TAGACAAAAACGTGCCGTTA+AGG - chr2.3:18700051-18700070 None:intergenic 40.0%
! TGGTCTTGGATGGTATCTTT+CGG - chr2.3:18700710-18700729 None:intergenic 40.0%
! TTGATGGATGGATCGTCATA+AGG - chr2.3:18699522-18699541 None:intergenic 40.0%
! TTGTGACCTTTTCCTTCACT+GGG - chr2.3:18702948-18702967 None:intergenic 40.0%
! TTTGTGACCTTTTCCTTCAC+TGG - chr2.3:18702949-18702968 None:intergenic 40.0%
!! AACAATGACTTGCTTTGGAC+TGG + chr2.3:18703048-18703067 MS.gene068742:CDS 40.0%
!! AGTCCAACAATGACTTGCTT+TGG + chr2.3:18703043-18703062 MS.gene068742:CDS 40.0%
!! GATTTGGTTTCCTTTTGAGC+TGG - chr2.3:18702156-18702175 None:intergenic 40.0%
!! TTCTCCTTTTCAAGAGCAAC+AGG - chr2.3:18699324-18699343 None:intergenic 40.0%
!!! AACGGTTTTGTTTGAACCCA+AGG + chr2.3:18701120-18701139 MS.gene068742:intron 40.0%
!!! ACGGTTTTGTTTGAACCCAA+GGG + chr2.3:18701121-18701140 MS.gene068742:intron 40.0%
!!! ATAGCTTTTGGAATTGCCTC+TGG - chr2.3:18703009-18703028 None:intergenic 40.0%
!!! GCTAGTTTTTGTCATGCCAT+AGG + chr2.3:18702586-18702605 MS.gene068742:intron 40.0%
!!! GGTTTTATTGTTCAATGCCG+AGG - chr2.3:18700029-18700048 None:intergenic 40.0%
AAGTCGTACACTTCTGACCA+AGG + chr2.3:18701684-18701703 MS.gene068742:CDS 45.0%
AGAAAGAGAGACAGGCGATT+CGG + chr2.3:18700881-18700900 MS.gene068742:CDS 45.0%
AGCAACATCTTTCGGGGTAT+TGG - chr2.3:18699445-18699464 None:intergenic 45.0%
AGCAGCTCTCAAAGCACAAA+AGG + chr2.3:18702365-18702384 MS.gene068742:CDS 45.0%
AGGAAACCAAATCCAAAGGG+AGG + chr2.3:18702163-18702182 MS.gene068742:CDS 45.0%
CAAATCCAAAGGGAGGGATT+TGG + chr2.3:18702170-18702189 MS.gene068742:CDS 45.0%
CAAATCCCTCCCTTTGGATT+TGG - chr2.3:18702172-18702191 None:intergenic 45.0%
CACAAGTAAAGTGAGGGCTT+TGG - chr2.3:18700474-18700493 None:intergenic 45.0%
CATTGATATCCAGTCTCTGC+AGG + chr2.3:18700945-18700964 MS.gene068742:CDS 45.0%
CCGTGAAATCAAACAGCTTG+AGG + chr2.3:18700622-18700641 MS.gene068742:CDS 45.0%
CCTTCAACACCGTTATCCAT+TGG - chr2.3:18699294-18699313 None:intergenic 45.0%
CGAGGCAACTGAACAAGAAA+AGG + chr2.3:18702897-18702916 MS.gene068742:CDS 45.0%
CTGAGAAAACAGCGTGATGA+GGG + chr2.3:18701024-18701043 MS.gene068742:CDS 45.0%
CTTATAGGTGGGGATTTGGA+TGG + chr2.3:18700853-18700872 MS.gene068742:CDS 45.0%
CTTGCTAATCCTGATGCTGT+TGG + chr2.3:18703080-18703099 MS.gene068742:CDS 45.0%
CTTGGTCCTCATTGCAGAAT+TGG - chr2.3:18700669-18700688 None:intergenic 45.0%
GAAAGATACCATCCAAGACC+AGG + chr2.3:18700709-18700728 MS.gene068742:CDS 45.0%
GAATGAATCTGCTTAGGTGC+AGG - chr2.3:18699477-18699496 None:intergenic 45.0%
GGAAACCAAATCCAAAGGGA+GGG + chr2.3:18702164-18702183 MS.gene068742:CDS 45.0%
GGAAAGCTGGAGAAAGATCT+GGG + chr2.3:18699345-18699364 MS.gene068742:CDS 45.0%
GGCAAAGTTTCAACTGGAGA+AGG - chr2.3:18702135-18702154 None:intergenic 45.0%
GGCAACTGAACAAGAAAAGG+TGG + chr2.3:18702900-18702919 MS.gene068742:CDS 45.0%
GTTGAGCCGCAAACTGTAAA+AGG + chr2.3:18699906-18699925 MS.gene068742:intron 45.0%
GTTGCACATGACTTGACTAC+GGG + chr2.3:18700124-18700143 MS.gene068742:intron 45.0%
GTTTCAACTGGAGAAGGCTT+AGG - chr2.3:18702129-18702148 None:intergenic 45.0%
TACCATCCAAGACCAGGTTA+AGG + chr2.3:18700715-18700734 MS.gene068742:CDS 45.0%
TCACAAAGGAAAGCAGTGTC+AGG + chr2.3:18702962-18702981 MS.gene068742:CDS 45.0%
TCCATGTGAGCCAAACTTGA+TGG - chr2.3:18699382-18699401 None:intergenic 45.0%
TCTTTACTCTTCCCTGCAGT+CGG + chr2.3:18700234-18700253 MS.gene068742:intron 45.0%
TGAGAAAACAGCGTGATGAG+GGG + chr2.3:18701025-18701044 MS.gene068742:CDS 45.0%
TGAGCTGGCAAAGTTTCAAC+TGG - chr2.3:18702141-18702160 None:intergenic 45.0%
TGCTAATCCTGATGCTGTTG+GGG + chr2.3:18703082-18703101 MS.gene068742:CDS 45.0%
TGGAAAGCTGGAGAAAGATC+TGG + chr2.3:18699344-18699363 MS.gene068742:CDS 45.0%
TGGAGTGAAGAAAGAGAGAC+AGG + chr2.3:18700873-18700892 MS.gene068742:CDS 45.0%
TTCTCACCCTACAATCAGAG+GGG - chr2.3:18701907-18701926 None:intergenic 45.0%
! AACGGCACGTTTTTGTCTAC+TGG + chr2.3:18700052-18700071 MS.gene068742:intron 45.0%
! ACCATCAAGTTTGGCTCACA+TGG + chr2.3:18699378-18699397 MS.gene068742:CDS 45.0%
! ACTCAGATTTTTCCGACTGC+AGG - chr2.3:18700249-18700268 None:intergenic 45.0%
! ATTTCAGGCTCTTTTGCAGC+AGG - chr2.3:18702243-18702262 None:intergenic 45.0%
! CAAGCTGTTTGATTTCACGG+AGG - chr2.3:18700622-18700641 None:intergenic 45.0%
! CCAATGGATAACGGTGTTGA+AGG + chr2.3:18699291-18699310 MS.gene068742:CDS 45.0%
! CTCAGATTTTTCCGACTGCA+GGG - chr2.3:18700248-18700267 None:intergenic 45.0%
! TCTGACCGTGATATTGGTTG+TGG + chr2.3:18701856-18701875 MS.gene068742:intron 45.0%
! TGGTCAGAAGTGTACGACTT+TGG - chr2.3:18701684-18701703 None:intergenic 45.0%
! TGTGACCTTTTCCTTCACTG+GGG - chr2.3:18702947-18702966 None:intergenic 45.0%
! TTCCGCTTCAGGATAGCTTT+TGG - chr2.3:18703021-18703040 None:intergenic 45.0%
!! CCCACTAGTAAGGCCTTATT+TGG - chr2.3:18702741-18702760 None:intergenic 45.0%
!! TACCTTAACCTGGTCTTGGA+TGG - chr2.3:18700720-18700739 None:intergenic 45.0%
!! TGTTGGACTTTTTCCGCTTC+AGG - chr2.3:18703032-18703051 None:intergenic 45.0%
!! TTCATGTCACTTTGGAACGG+CGG + chr2.3:18701928-18701947 MS.gene068742:CDS 45.0%
!!! ACAGCTTTTGGTAATGCCTC+AGG - chr2.3:18702084-18702103 None:intergenic 45.0%
!!! ACATCCATGTTTTGGTGCCT+CGG + chr2.3:18700009-18700028 MS.gene068742:intron 45.0%
!! AATATTGTTAAAATTAAAAA+CGG + chr2.3:18701102-18701121 MS.gene068742:intron 5.0%
AGCTGTCGCAAAACAGCCAA+AGG + chr2.3:18702098-18702117 MS.gene068742:CDS 50.0%
CAAACAGCTTGAGGGGACAA+GGG + chr2.3:18700631-18700650 MS.gene068742:CDS 50.0%
CGAGATGGTTCAAGGACCAA+TGG + chr2.3:18699275-18699294 MS.gene068742:CDS 50.0%
CTTCCTTTCAGCAGCAAGCT+TGG - chr2.3:18702316-18702335 None:intergenic 50.0%
GAATGCTCTCGTGCTGAATG+CGG - chr2.3:18700577-18700596 None:intergenic 50.0%
GACACGAATCCCTTCAAGAC+CGG - chr2.3:18699864-18699883 None:intergenic 50.0%
GAGAAAACAGCGTGATGAGG+GGG + chr2.3:18701026-18701045 MS.gene068742:CDS 50.0%
GATCGTCATAAGGCCTGCAT+CGG - chr2.3:18699512-18699531 None:intergenic 50.0%
GCAAGCTGTCACTCAGAAGA+GGG + chr2.3:18700975-18700994 MS.gene068742:CDS 50.0%
GCAGCTTATAGGTGGGGATT+TGG + chr2.3:18700849-18700868 MS.gene068742:intron 50.0%
GCTGAGAAAACAGCGTGATG+AGG + chr2.3:18701023-18701042 MS.gene068742:CDS 50.0%
GCTGGTGAGACCATCAAGTT+TGG + chr2.3:18699369-18699388 MS.gene068742:CDS 50.0%
GGATATGAGGCAGCTGAGTA+GGG + chr2.3:18701996-18702015 MS.gene068742:CDS 50.0%
GTGGGATTCGAGATGGTTCA+AGG + chr2.3:18699267-18699286 MS.gene068742:CDS 50.0%
TCAAACAGCTTGAGGGGACA+AGG + chr2.3:18700630-18700649 MS.gene068742:CDS 50.0%
TCAAATAATGCTGGTCGGGG+CGG + chr2.3:18700382-18700401 MS.gene068742:CDS 50.0%
TCAGGTTCAGCAGCAGGTTT+CGG - chr2.3:18702066-18702085 None:intergenic 50.0%
TGAAGGCAAAGAGGGTGAGT+TGG + chr2.3:18699613-18699632 MS.gene068742:intron 50.0%
TGAGGTTGTGGGATTCGAGA+TGG + chr2.3:18699260-18699279 MS.gene068742:CDS 50.0%
TGCAAGCTGTCACTCAGAAG+AGG + chr2.3:18700974-18700993 MS.gene068742:CDS 50.0%
TGGAGACGAATCTGCGAAAG+CGG + chr2.3:18699398-18699417 MS.gene068742:CDS 50.0%
TGGATATGAGGCAGCTGAGT+AGG + chr2.3:18701995-18702014 MS.gene068742:CDS 50.0%
! AATGCCGAGGCACCAAAACA+TGG - chr2.3:18700016-18700035 None:intergenic 50.0%
! GAACGGCGGCAAAGCTTTTA+GGG + chr2.3:18701942-18701961 MS.gene068742:CDS 50.0%
! TTGCCTCTGGTGCTTTTGCT+CGG - chr2.3:18702996-18703015 None:intergenic 50.0%
!! AAGCCAAGCTTGCTGCTGAA+AGG + chr2.3:18702310-18702329 MS.gene068742:CDS 50.0%
!! GGCTGTTTTGCGACAGCTTT+TGG - chr2.3:18702096-18702115 None:intergenic 50.0%
!! TCAGATCACTGAAGCGCTGA+AGG + chr2.3:18699596-18699615 MS.gene068742:CDS 50.0%
!! TGAAGCGCTGAAGGCAAAGA+GGG + chr2.3:18699605-18699624 MS.gene068742:CDS 50.0%
AATGCCTCAGGTTCAGCAGC+AGG - chr2.3:18702072-18702091 None:intergenic 55.0%
ACAGGAAGCTGCAGAACTCG+AGG + chr2.3:18702879-18702898 MS.gene068742:CDS 55.0%
ATGAGGCAGCTGAGTAGGGA+CGG + chr2.3:18702000-18702019 MS.gene068742:CDS 55.0%
ATGCAAGCCCCAACAGCATC+AGG - chr2.3:18703092-18703111 None:intergenic 55.0%
CAAATAATGCTGGTCGGGGC+GGG + chr2.3:18700383-18700402 MS.gene068742:CDS 55.0%
CGGGATCTTCTCATCTGAGG+AGG + chr2.3:18700402-18700421 MS.gene068742:CDS 55.0%
CTGGAGAAAGATCTGGGAGC+TGG + chr2.3:18699351-18699370 MS.gene068742:CDS 55.0%
CTGGGATGAAAAGCCACTGC+TGG + chr2.3:18702035-18702054 MS.gene068742:CDS 55.0%
GAAACCTGCTGCTGAACCTG+AGG + chr2.3:18702065-18702084 MS.gene068742:CDS 55.0%
GAAGGCTTAGGCGCTTCCTT+TGG - chr2.3:18702117-18702136 None:intergenic 55.0%
GGTTTCGGTTCTTCCAGCAG+TGG - chr2.3:18702051-18702070 None:intergenic 55.0%
TGCAGCTTCCTGTTCCTCCT+GGG - chr2.3:18702872-18702891 None:intergenic 55.0%
TGCTGCCAAATCCCTCCCTT+TGG - chr2.3:18702178-18702197 None:intergenic 55.0%
! CTTTTCCTTCACTGGGGCAG+CGG - chr2.3:18702941-18702960 None:intergenic 55.0%
! GGAACGGCGGCAAAGCTTTT+AGG + chr2.3:18701941-18701960 MS.gene068742:CDS 55.0%
! TGGTGCTTTTGCTCGGCTTC+TGG - chr2.3:18702989-18703008 None:intergenic 55.0%
!! AAGCCGAGCAAAAGCACCAG+AGG + chr2.3:18702990-18703009 MS.gene068742:CDS 55.0%
!! CTGAAGCGCTGAAGGCAAAG+AGG + chr2.3:18699604-18699623 MS.gene068742:CDS 55.0%
CGCTGCCCCAGTGAAGGAAA+AGG + chr2.3:18702939-18702958 MS.gene068742:CDS 60.0%
CTGCAGCTTCCTGTTCCTCC+TGG - chr2.3:18702873-18702892 None:intergenic 60.0%
GCAGCTTCCTGTTCCTCCTG+GGG - chr2.3:18702871-18702890 None:intergenic 60.0%
GCAGTTCTGCCTGCAGAGAC+TGG - chr2.3:18700957-18700976 None:intergenic 60.0%
GGAGATTGAGCCTCTGCAGC+AGG + chr2.3:18700339-18700358 MS.gene068742:CDS 60.0%
GGGCGGGATCTTCTCATCTG+AGG + chr2.3:18700399-18700418 MS.gene068742:CDS 60.0%
TCTGACCAAGGCACGTGAGC+TGG + chr2.3:18701696-18701715 MS.gene068742:CDS 60.0%
TGAGGCAGCTGAGTAGGGAC+GGG + chr2.3:18702001-18702020 MS.gene068742:CDS 60.0%
TTCCTGTTCCTCCTGGGGAG+TGG - chr2.3:18702866-18702885 None:intergenic 60.0%
TTTCCCAGTGCCTGCTGCAG+AGG - chr2.3:18700352-18700371 None:intergenic 60.0%
!! GCAGCAGGAGTGTCCTTGTG+AGG - chr2.3:18702228-18702247 None:intergenic 60.0%
AGCAGCCAGCTCACGTGCCT+TGG - chr2.3:18701704-18701723 None:intergenic 65.0%
GAGCCTCTGCAGCAGGCACT+GGG + chr2.3:18700346-18700365 MS.gene068742:CDS 65.0%
GGACGGGCGCATGAGGAACT+GGG + chr2.3:18702017-18702036 MS.gene068742:CDS 65.0%
TGAGCCTCTGCAGCAGGCAC+TGG + chr2.3:18700345-18700364 MS.gene068742:CDS 65.0%
TGAGTAGGGACGGGCGCATG+AGG + chr2.3:18702010-18702029 MS.gene068742:CDS 65.0%
TGCCACTCCCCAGGAGGAAC+AGG + chr2.3:18702861-18702880 MS.gene068742:CDS 65.0%
AGCTGCTGCCACTCCCCAGG+AGG + chr2.3:18702855-18702874 MS.gene068742:CDS 70.0%
GGGACGGGCGCATGAGGAAC+TGG + chr2.3:18702016-18702035 MS.gene068742:CDS 70.0%
TGAGGCCGCTGCCCCAGTGA+AGG + chr2.3:18702933-18702952 MS.gene068742:CDS 70.0%
TGGAGCTGCTGCCACTCCCC+AGG + chr2.3:18702852-18702871 MS.gene068742:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 18699252 18703128 18699252 ID=MS.gene068742
chr2.3 mRNA 18699252 18703128 18699252 ID=MS.gene068742.t1;Parent=MS.gene068742
chr2.3 exon 18699252 18699626 18699252 ID=MS.gene068742.t1.exon1;Parent=MS.gene068742.t1
chr2.3 CDS 18699252 18699626 18699252 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18700253 18700438 18700253 ID=MS.gene068742.t1.exon2;Parent=MS.gene068742.t1
chr2.3 CDS 18700253 18700438 18700253 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18700557 18700736 18700557 ID=MS.gene068742.t1.exon3;Parent=MS.gene068742.t1
chr2.3 CDS 18700557 18700736 18700557 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18700853 18701047 18700853 ID=MS.gene068742.t1.exon4;Parent=MS.gene068742.t1
chr2.3 CDS 18700853 18701047 18700853 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18701667 18701765 18701667 ID=MS.gene068742.t1.exon5;Parent=MS.gene068742.t1
chr2.3 CDS 18701667 18701765 18701667 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18701919 18702407 18701919 ID=MS.gene068742.t1.exon6;Parent=MS.gene068742.t1
chr2.3 CDS 18701919 18702407 18701919 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
chr2.3 exon 18702823 18703128 18702823 ID=MS.gene068742.t1.exon7;Parent=MS.gene068742.t1
chr2.3 CDS 18702823 18703128 18702823 ID=cds.MS.gene068742.t1;Parent=MS.gene068742.t1
Gene Sequence

>MS.gene068742

ATGTCGGTTGAGGTTGTGGGATTCGAGATGGTTCAAGGACCAATGGATAACGGTGTTGAAGGAGACAAACCTGTTGCTCTTGAAAAGGAGAATGGAAAGCTGGAGAAAGATCTGGGAGCTGGTGAGACCATCAAGTTTGGCTCACATGGAGACGAATCTGCGAAAGCGGAAGTCAACGATGTTGCTGATTCCAATACCCCGAAAGATGTTGCTGAAGAATGGCCTGCACCTAAGCAGATTCATTCTTTTTACTTTGTCCGATGCAGGCCTTATGACGATCCATCCATCAAAGCTAAGATTGATCTGCTTGATAAGGAGATCAGCAAGAAAAATCAAGCTCGGTTTCAGATCACTGAAGCGCTGAAGGCAAAGAGGGTGAGTTGGTGATAATTCACTATTGTTGATTGTCGTGTTTGTTACTGTACAAAACCCTAAATATCAAACTATTTTACTTGTTATTACTGTGGTGCCATCGAGTTAATGTAGATATAAGATAATCAGAATGTTTTAAAACCGTAGCGATTTAATATTTTATTTGAGCTATTAGTGCTATGCCTGAGTTGTCAATTAATATTGAAAATTAATGCAAAGGGTCAAATACTTTATTTTCCGGTCTTGAAGGGATTCGTGTCTTAGTGTCTCTTGACTCAAGGCGTTGAGCCGCAAACTGTAAAAGGCACATTTTGTCGTATTACCTTGAGATGTAACCTGTAAAATTAGTTCAAAGGAGTCAAATCATTTATTTTCTGATGTCAAGACATCCATGTTTTGGTGCCTCGGCATTGAACAATAAAACCCTTAACGGCACGTTTTTGTCTACTGGCGAAGTTATTTCTCAAAATCATTTGATATGTAATAAAAAATTAATGTGTGTTGCACATGACTTGACTACGGGAAGTTTTTTCTCCTTTAAAAAAAAGGAACTTTTTTCTATGAAAGTTTTATAATCTCAATATACATCTTATTATAATTGCATATTTGGTCTTTACTCTTCCCTGCAGTCGGAAAAATCTGAGTTGATTTCTCAGATTAAGATTCTAAGAGAGGACAACAGGCAATATCAGAGTCTTTTTGATGAGAAAATGAAGGAGATTGAGCCTCTGCAGCAGGCACTGGGAAAGCTGCGCAATTCAAATAATGCTGGTCGGGGCGGGATCTTCTCATCTGAGGAGGAACTTGACCATTTCGTATGTTATGAATCTCTTAGTTGCTTTTTAATCCAAAGCCCTCACTTTACTTGTGTTTTAGTTAATTCGAACATGTATTCTTCATTCACTCACCACTGATATGCTTTTATGGATACAGATATATGGCTTACAGTACCGCATTCAGCACGAGAGCATTCCATTGACTGAAGAAAAGCAAATCCTCCGTGAAATCAAACAGCTTGAGGGGACAAGGGAGAAAGTCATTGCCAATTCTGCAATGAGGACCAAGTTGCATGATACTATTGGGCCGAAAGATACCATCCAAGACCAGGTTAAGGTAAGATATACTTTTTTGTAAGTTTTGCTATTGGTTTTTTTTCAAGAGTTTTGAATTTTTTTCATTATGTTTTATTATTAGTTAAATAGTCCTTTACATGTTCAATTTTCTTGCAGCTTATAGGTGGGGATTTGGATGGAGTGAAGAAAGAGAGACAGGCGATTCGGTCCAAAATCAAGCAAATTGATGATGTGCTGAAAGCCATTGACATTGATATCCAGTCTCTGCAGGCAGAACTGCAAGCTGTCACTCAGAAGAGGGAACAAGCTTTTGAGAGCATTCAGAAGCTGAGAAAACAGCGTGATGAGGGGGTATGTTTTGCTATAATTATGAGCATTGTCTACTCTATTGTCTAGTCTCAAAGGAATATTGTTAAAATTAAAAACGGTTTTGTTTGAACCCAAGGGTGCATTTGATTGTGAATTTTTTCTGGTAACGTTTTCTATATTCAGTCTTAACTACAAAAATGTCTTCTTTTTTTTCAAATTTATGTATAGGATGTGGTGAAACCCTTATTTTTACATTTTCATCTCAGTTTACATGAATAAACTTTTGAAAGATTGAATACAAAATGTGGAAGATGTCACTTCTATTCATCTGAAAATGTGGCATTCAATGACTCCCAGTCTGTTTTTAAATCTTCCGATTTTCATCCAGTATCATACCACATTTAATCTGACTAATAGTGAAGTTTGCACCTAAAATTTTCTGTTTGATTTTTAGTTGAAATTGCGATAAGAATCTGATGATTGTTTAGCATATCTATTGTCATGAACCCGTCAATGTGTAATTCTCGATGCTGTTGCTAATGTAACTATCTACTAATTTTTGTCGTTATTTCATAACTTGTTTTTCTTTCTTTCTTTCCTAGTGTCATGATCTAACTCTCCAAATTAATTTCTGAATATGACTTCGTATTTTCTTTTTCAGAACACCTATTTCTACCAAAGTCGTACACTTCTGACCAAGGCACGTGAGCTGGCTGCTAAGAAAGATGTTGCTGCTATTGATGAACTTTCACAGACAGAGGTTAGTTAGCCCACATAAATATTCATTCTTCGGAGCTATCAAATAGGCAACGATGGGATTACACAGCAACCATCTCTTTTTGCTGATTTCTCTGACCGTGATATTGGTTGTGGTTGAATCTTGCTTTTTTCTAATTTTCCCCTCTGATTGTAGGGTGAGAAATTCATGTCACTTTGGAACGGCGGCAAAGCTTTTAGGGCTGATTATGAGAAAAGAATTTTGTCATCGTTGGATATGAGGCAGCTGAGTAGGGACGGGCGCATGAGGAACTGGGATGAAAAGCCACTGCTGGAAGAACCGAAACCTGCTGCTGAACCTGAGGCATTACCAAAAGCTGTCGCAAAACAGCCAAAGGAAGCGCCTAAGCCTTCTCCAGTTGAAACTTTGCCAGCTCAAAAGGAAACCAAATCCAAAGGGAGGGATTTGGCAGCAGTTGATGATGATTATGAATTTGAAAATCCTCACAAGGACACTCCTGCTGCAAAAGAGCCTGAAATTGATCCAGCAAAGTTGAAAGAGATGAAAAGAGAAGAGGAAATTGCAAAAGCCAAGCTTGCTGCTGAAAGGAAGAAGAAGATGGCAGAGAAAGCTGCAGCAAAAGCAGCTCTCAAAGCACAAAAGGAAGCTGAGAAGAAACTTAAGGTAATTTAATTCTTGATTTGGTTCTTTTTTTATTTAGATTCTCTCGTGCTAGTTTATATCATGCTATAGAGATTTTTTTTTTTTTAAAAAAAAAAATAAACTATCTTTCGACTCATCATTATTTGTGTCGGGTCTATTAATTTTACCGTAATATCTTTATGGATTTAGATTCTCTCGTGCTAGTTTTTGTCATGCCATAGGGAAAAAAGGTAACAAATTAGGTCCTTCAACTATTTGAAGATTTTTAAGTAGGTCCCTAAACTAAAAATGTTTGTAATTGGATCTCTGAATTAGTGTAATTTGTAATGAGGCCTTGAATAAATTGTTTATCCAAATAAGGCCTTACTAGTGGGATCTAAATCCATTTTCCTATTCCATTGAGATATAATTTCCAAAATCTGGAATTGTTTTGTAGGTCCTCGAAAAGAAAGCAAAGAAGAAGTCTGGAGCTGCTGCCACTCCCCAGGAGGAACAGGAAGCTGCAGAACTCGAGGCAACTGAACAAGAAAAGGTGGATGATGTTGTTGAGGCCGCTGCCCCAGTGAAGGAAAAGGTCACAAAGGAAAGCAGTGTCAGGTCCAGAAGCCGAGCAAAAGCACCAGAGGCAATTCCAAAAGCTATCCTGAAGCGGAAAAAGTCCAACAATGACTTGCTTTGGACTGGTATTGCTGTCTTGCTAATCCTGATGCTGTTGGGGCTTGCATACGTCTATTTTGTCTAA
Protein sequence

>MS.gene068742.t1

MSVEVVGFEMVQGPMDNGVEGDKPVALEKENGKLEKDLGAGETIKFGSHGDESAKAEVNDVADSNTPKDVAEEWPAPKQIHSFYFVRCRPYDDPSIKAKIDLLDKEISKKNQARFQITEALKAKRSEKSELISQIKILREDNRQYQSLFDEKMKEIEPLQQALGKLRNSNNAGRGGIFSSEEELDHFIYGLQYRIQHESIPLTEEKQILREIKQLEGTREKVIANSAMRTKLHDTIGPKDTIQDQVKLIGGDLDGVKKERQAIRSKIKQIDDVLKAIDIDIQSLQAELQAVTQKREQAFESIQKLRKQRDEGNTYFYQSRTLLTKARELAAKKDVAAIDELSQTEGEKFMSLWNGGKAFRADYEKRILSSLDMRQLSRDGRMRNWDEKPLLEEPKPAAEPEALPKAVAKQPKEAPKPSPVETLPAQKETKSKGRDLAAVDDDYEFENPHKDTPAAKEPEIDPAKLKEMKREEEIAKAKLAAERKKKMAEKAAAKAALKAQKEAEKKLKVLEKKAKKKSGAAATPQEEQEAAELEATEQEKVDDVVEAAAPVKEKVTKESSVRSRSRAKAPEAIPKAILKRKKSNNDLLWTGIAVLLILMLLGLAYVYFV