Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069421.t1 | XP_013447577.1 | 93.7 | 476 | 29 | 1 | 1 | 475 | 1 | 476 | 1.60E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069421.t1 | Q9FME2 | 46.2 | 394 | 173 | 9 | 1 | 383 | 1 | 366 | 2.3e-76 | 287.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069421.t1 | A0A072TW25 | 93.7 | 476 | 29 | 1 | 1 | 475 | 1 | 476 | 1.1e-201 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene069421 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene069421 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene069421 | 0.81002 | 1.42E-50 | -1.69E-46 |
| MS.gene054551 | MS.gene069421 | 0.820042 | 8.45E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene069421 | 0.838275 | 3.17E-57 | -1.69E-46 |
| MS.gene054850 | MS.gene069421 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene054941 | MS.gene069421 | 0.806933 | 6.47E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene069421 | 0.811765 | 5.95E-51 | -1.69E-46 |
| MS.gene05640 | MS.gene069421 | 0.826153 | 3.17E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene069421 | 0.831009 | 2.13E-55 | -1.69E-46 |
| MS.gene057669 | MS.gene069421 | 0.873801 | 1.11E-67 | -1.69E-46 |
| MS.gene058128 | MS.gene069421 | 0.831713 | 1.43E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene069421 | 0.803658 | 3.14E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene069421 | 0.844544 | 7.08E-59 | -1.69E-46 |
| MS.gene05926 | MS.gene069421 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene059616 | MS.gene069421 | 0.818997 | 1.46E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene069421 | 0.81637 | 5.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069421.t1 | MTR_7g013840 | 95.588 | 476 | 20 | 1 | 1 | 475 | 1 | 476 | 0.0 | 827 |
| MS.gene069421.t1 | MTR_7g013840 | 95.378 | 476 | 20 | 2 | 1 | 475 | 1 | 475 | 0.0 | 821 |
| MS.gene069421.t1 | MTR_4g109640 | 50.481 | 416 | 173 | 10 | 1 | 405 | 1 | 394 | 3.43e-116 | 349 |
| MS.gene069421.t1 | MTR_4g109640 | 50.263 | 380 | 160 | 9 | 1 | 369 | 1 | 362 | 2.39e-105 | 318 |
| MS.gene069421.t1 | MTR_4g109640 | 49.740 | 384 | 164 | 9 | 1 | 373 | 1 | 366 | 6.25e-105 | 317 |
| MS.gene069421.t1 | MTR_7g055610 | 40.082 | 489 | 228 | 15 | 1 | 464 | 6 | 454 | 9.40e-93 | 291 |
| MS.gene069421.t1 | MTR_7g057520 | 40.041 | 487 | 227 | 15 | 3 | 464 | 1 | 447 | 4.49e-92 | 289 |
| MS.gene069421.t1 | MTR_4g083150 | 40.421 | 428 | 191 | 11 | 11 | 413 | 9 | 397 | 1.95e-83 | 265 |
| MS.gene069421.t1 | MTR_7g098440 | 30.105 | 475 | 273 | 14 | 13 | 459 | 9 | 452 | 2.17e-42 | 156 |
| MS.gene069421.t1 | MTR_1g045800 | 50.000 | 120 | 57 | 2 | 17 | 136 | 14 | 130 | 1.03e-30 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069421.t1 | AT5G60980 | 47.073 | 427 | 186 | 10 | 1 | 416 | 1 | 398 | 1.74e-98 | 304 |
| MS.gene069421.t1 | AT5G60980 | 47.073 | 427 | 186 | 10 | 1 | 416 | 1 | 398 | 1.74e-98 | 304 |
| MS.gene069421.t1 | AT5G60980 | 46.838 | 427 | 186 | 11 | 1 | 416 | 1 | 397 | 7.16e-96 | 297 |
| MS.gene069421.t1 | AT5G60980 | 46.838 | 427 | 186 | 11 | 1 | 416 | 1 | 397 | 7.16e-96 | 297 |
| MS.gene069421.t1 | AT3G25150 | 39.644 | 449 | 205 | 12 | 1 | 427 | 1 | 405 | 3.01e-84 | 268 |
| MS.gene069421.t1 | AT3G25150 | 39.644 | 449 | 205 | 12 | 1 | 427 | 100 | 504 | 4.45e-83 | 268 |
| MS.gene069421.t1 | AT5G48650 | 36.384 | 448 | 239 | 12 | 5 | 427 | 4 | 430 | 1.90e-66 | 221 |
| MS.gene069421.t1 | AT1G13730 | 35.748 | 428 | 218 | 12 | 1 | 416 | 1 | 383 | 1.37e-61 | 207 |
| MS.gene069421.t1 | AT1G13730 | 35.748 | 428 | 218 | 12 | 1 | 416 | 1 | 383 | 1.37e-61 | 207 |
| MS.gene069421.t1 | AT2G03640 | 34.186 | 430 | 239 | 10 | 14 | 435 | 12 | 405 | 4.96e-60 | 203 |
| MS.gene069421.t1 | AT2G03640 | 33.260 | 457 | 230 | 14 | 1 | 435 | 1 | 404 | 5.79e-59 | 200 |
| MS.gene069421.t1 | AT2G03640 | 33.260 | 457 | 230 | 14 | 1 | 435 | 1 | 404 | 5.79e-59 | 200 |
| MS.gene069421.t1 | AT2G03640 | 33.260 | 457 | 230 | 14 | 1 | 435 | 1 | 404 | 5.79e-59 | 200 |
| MS.gene069421.t1 | AT2G03640 | 32.632 | 475 | 216 | 16 | 14 | 435 | 12 | 435 | 6.39e-55 | 190 |
| MS.gene069421.t1 | AT1G69250 | 32.308 | 390 | 211 | 11 | 12 | 385 | 8 | 360 | 1.13e-46 | 167 |
| MS.gene069421.t1 | AT1G69250 | 31.868 | 364 | 197 | 10 | 10 | 359 | 6 | 332 | 8.67e-40 | 148 |
| MS.gene069421.t1 | AT5G43960 | 31.818 | 396 | 241 | 13 | 12 | 386 | 6 | 393 | 1.08e-39 | 149 |
| MS.gene069421.t1 | AT5G43960 | 31.471 | 340 | 205 | 12 | 68 | 386 | 2 | 334 | 1.76e-28 | 116 |
| MS.gene069421.t1 | AT3G07250 | 37.226 | 137 | 83 | 2 | 12 | 148 | 5 | 138 | 4.33e-20 | 94.0 |
| MS.gene069421.t1 | AT3G07250 | 40.860 | 93 | 55 | 0 | 294 | 386 | 257 | 349 | 5.62e-13 | 71.6 |
| MS.gene069421.t1 | AT3G55540 | 35.294 | 136 | 81 | 5 | 13 | 142 | 28 | 162 | 3.18e-16 | 80.1 |
Find 129 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCAAATTTCGAATGTAAA+TGG | 0.177373 | 7.2:-83441579 | None:intergenic |
| GAAGCAGAGTTTCAGAAATT+TGG | 0.209981 | 7.2:+83441626 | MS.gene069421:CDS |
| CAGGCTTCACCTATTGCTAT+TGG | 0.217866 | 7.2:+83443155 | MS.gene069421:intron |
| TAAAGTCCCAAAAGGAAATT+TGG | 0.227636 | 7.2:+83441019 | MS.gene069421:CDS |
| AGGCTTCACCTATTGCTATT+GGG | 0.229861 | 7.2:+83443156 | MS.gene069421:intron |
| AATAAGAAAACTTACTTTCA+TGG | 0.246801 | 7.2:-83440219 | None:intergenic |
| AATGCATTACCAACCATTTC+GGG | 0.257065 | 7.2:-83440080 | None:intergenic |
| TCAGAACTATCATTACTTTC+GGG | 0.258085 | 7.2:-83441191 | None:intergenic |
| AAACATTCTCAGCAACAATT+TGG | 0.265731 | 7.2:-83440764 | None:intergenic |
| TTCAGAGGTCGTCGAAATTT+CGG | 0.272165 | 7.2:+83443951 | MS.gene069421:CDS |
| TTTCAGTTGGCGGTGGCACC+GGG | 0.277271 | 7.2:+83443874 | MS.gene069421:intron |
| TTCGGTGGTGGTCGGGGCTA+TGG | 0.280647 | 7.2:+83443969 | MS.gene069421:CDS |
| GCCGGTACCAAATTTCCTTT+TGG | 0.283644 | 7.2:-83441026 | None:intergenic |
| CTCAGAACTATCATTACTTT+CGG | 0.285415 | 7.2:-83441192 | None:intergenic |
| TTCAATGAATAATGCAATTC+AGG | 0.292406 | 7.2:+83441831 | MS.gene069421:CDS |
| ATCGATGCATACGACTTCTT+TGG | 0.299869 | 7.2:-83440918 | None:intergenic |
| TTCTCATTTGACTGAAAATC+AGG | 0.302484 | 7.2:-83440846 | None:intergenic |
| AAATGCATTACCAACCATTT+CGG | 0.303516 | 7.2:-83440081 | None:intergenic |
| TCGAAATTTCGGTGGTGGTC+GGG | 0.308035 | 7.2:+83443962 | MS.gene069421:CDS |
| GTTTCAGTTGGCGGTGGCAC+CGG | 0.312481 | 7.2:+83443873 | MS.gene069421:intron |
| CATCCAAGTCAGAAATAATA+AGG | 0.326652 | 7.2:+83441667 | MS.gene069421:CDS |
| CAGCAGCAGGGATACTGTTT+CGG | 0.338179 | 7.2:+83441784 | MS.gene069421:intron |
| GGATGTGGTTCTGAAGGTTC+AGG | 0.359795 | 7.2:-83440550 | None:intergenic |
| CTAGGACCACGACCTCTAAT+AGG | 0.360777 | 7.2:-83444026 | None:intergenic |
| CCGGAGAATGGTGAAGAATA+TGG | 0.373779 | 7.2:-83440118 | None:intergenic |
| TATTCATTGAATTTACTGAT+AGG | 0.379005 | 7.2:-83441819 | None:intergenic |
| CTTGTGACCGGATGCTTGAC+TGG | 0.391034 | 7.2:+83440427 | MS.gene069421:CDS |
| CGAGGTGAGTTTCCTATTAG+AGG | 0.393112 | 7.2:+83444014 | MS.gene069421:CDS |
| CGCCACCTCTTCCTCTCCCT+TGG | 0.398041 | 7.2:-83444070 | None:intergenic |
| GTCATCACACCATTGGAATC+AGG | 0.399741 | 7.2:-83440185 | None:intergenic |
| TGGAAGACCTAGGTTTCCTT+CGG | 0.401704 | 7.2:+83443902 | MS.gene069421:CDS |
| TGAGCAACCGTAACATTTAA+CGG | 0.403267 | 7.2:-83441599 | None:intergenic |
| TCGGGGTTGCCAACATTATC+CGG | 0.409067 | 7.2:-83441173 | None:intergenic |
| ATAGGCCAATCATCATTAAC+TGG | 0.415415 | 7.2:-83440571 | None:intergenic |
| TCGGTGGTGGTCGGGGCTAT+GGG | 0.418000 | 7.2:+83443970 | MS.gene069421:CDS |
| GTCGAAATTTCGGTGGTGGT+CGG | 0.423012 | 7.2:+83443961 | MS.gene069421:CDS |
| GAGGTTACAGTAACAGCAAT+AGG | 0.425524 | 7.2:-83440589 | None:intergenic |
| ACATGAGAATTCGCGGGGTC+CGG | 0.431165 | 7.2:-83440732 | None:intergenic |
| CACATCCAGTTAATGATGAT+TGG | 0.440658 | 7.2:+83440566 | MS.gene069421:CDS |
| ATTTCGGGACTGGGAGTAGT+TGG | 0.444535 | 7.2:-83440065 | None:intergenic |
| ACATTATCCGGTGCTGCATC+AGG | 0.444678 | 7.2:-83441161 | None:intergenic |
| GGCTTCACCTATTGCTATTG+GGG | 0.444733 | 7.2:+83443157 | MS.gene069421:intron |
| AAATTTGCCGTTAAATGTTA+CGG | 0.446479 | 7.2:+83441592 | MS.gene069421:CDS |
| CGAAATTTCGGTGGTGGTCG+GGG | 0.452567 | 7.2:+83443963 | MS.gene069421:CDS |
| GGAAGACCTAGGTTTCCTTC+GGG | 0.459157 | 7.2:+83443903 | MS.gene069421:CDS |
| AACTACTCCCAGTCCCGAAA+TGG | 0.459367 | 7.2:+83440067 | MS.gene069421:CDS |
| TTACCTTATTATTTCTGACT+TGG | 0.460817 | 7.2:-83441670 | None:intergenic |
| AATCACTTCTCTGTCTCAAA+AGG | 0.464912 | 7.2:+83440890 | MS.gene069421:CDS |
| AAATGAGAATGATGATTCTC+AGG | 0.471569 | 7.2:+83440860 | MS.gene069421:CDS |
| TGCGTTTCATGATGGTTAGA+AGG | 0.471847 | 7.2:-83440792 | None:intergenic |
| CCATATTCTTCACCATTCTC+CGG | 0.472553 | 7.2:+83440118 | MS.gene069421:CDS |
| TTTCTGACTTGGATGCATCC+TGG | 0.473445 | 7.2:-83441659 | None:intergenic |
| TGCAGTGCCTGATGCAGCAC+CGG | 0.476092 | 7.2:+83441154 | MS.gene069421:CDS |
| TATCACCAAGGGAGAGGAAG+AGG | 0.479109 | 7.2:+83444065 | MS.gene069421:CDS |
| ATTACCAACCATTTCGGGAC+TGG | 0.482428 | 7.2:-83440075 | None:intergenic |
| CAACTATCTGCGTTTCATGA+TGG | 0.483930 | 7.2:-83440800 | None:intergenic |
| GATGTGGTTCTGAAGGTTCA+GGG | 0.484345 | 7.2:-83440549 | None:intergenic |
| TTACCAACCATTTCGGGACT+GGG | 0.487486 | 7.2:-83440074 | None:intergenic |
| GCCTGCTTTACAGTATTAGT+TGG | 0.489014 | 7.2:-83441086 | None:intergenic |
| TTGCAGGTTAAAGTCCCAAA+AGG | 0.489323 | 7.2:+83441011 | MS.gene069421:intron |
| TTCGCGGGGTCCGGTGGAGA+AGG | 0.493478 | 7.2:-83440723 | None:intergenic |
| TTCTTTCACATGAGAATTCG+CGG | 0.493732 | 7.2:-83440739 | None:intergenic |
| ATCCTTTCCAGTCAAGCATC+CGG | 0.494347 | 7.2:-83440434 | None:intergenic |
| GTTGGCACATACACTTTAGC+CGG | 0.498098 | 7.2:-83441044 | None:intergenic |
| GAAGGATCAGCAATGTGAAT+CGG | 0.501939 | 7.2:-83440705 | None:intergenic |
| GGAGAGGAAGAGGTGGCGGC+CGG | 0.502292 | 7.2:+83444075 | MS.gene069421:CDS |
| AAATGTTACGGTTGCTCAGT+TGG | 0.504697 | 7.2:+83441604 | MS.gene069421:CDS |
| CAATCATCATTAACTGGATG+TGG | 0.514709 | 7.2:-83440565 | None:intergenic |
| TTTCGAAATGATTCATTCAG+AGG | 0.521602 | 7.2:+83443936 | MS.gene069421:CDS |
| AATAAACTTGCCTGGTTCTG+AGG | 0.523234 | 7.2:-83440608 | None:intergenic |
| TTTCAAATTACCTCGGGCAG+TGG | 0.524229 | 7.2:-83443210 | None:intergenic |
| GGTCCTAGTGGACGTGGAGA+AGG | 0.529839 | 7.2:+83444041 | MS.gene069421:CDS |
| AAATTTGGACCGATCAAGCC+AGG | 0.530806 | 7.2:+83441641 | MS.gene069421:CDS |
| TGGATGCATCCTGGCTTGAT+CGG | 0.535677 | 7.2:-83441650 | None:intergenic |
| AGGTTTCCTTCGGGAAGAAG+TGG | 0.536808 | 7.2:+83443912 | MS.gene069421:CDS |
| TCAGTTGGCGGTGGCACCGG+GGG | 0.537253 | 7.2:+83443876 | MS.gene069421:intron |
| AACTGATGTCATCACACCAT+TGG | 0.537745 | 7.2:-83440192 | None:intergenic |
| GGCTTATCACACTAGACTCC+TGG | 0.538042 | 7.2:-83440160 | None:intergenic |
| GCCAACTAATACTGTAAAGC+AGG | 0.538243 | 7.2:+83441085 | MS.gene069421:CDS |
| CGAAATCCACTTCTTCCCGA+AGG | 0.539572 | 7.2:-83443918 | None:intergenic |
| TTAACTGGATGTGGTTCTGA+AGG | 0.540333 | 7.2:-83440556 | None:intergenic |
| TGACTGAAAATCAGGTTCTA+CGG | 0.540434 | 7.2:-83440838 | None:intergenic |
| TTCAGTTGGCGGTGGCACCG+GGG | 0.541103 | 7.2:+83443875 | MS.gene069421:intron |
| CAAGGGAGAGGAAGAGGTGG+CGG | 0.542822 | 7.2:+83444071 | MS.gene069421:CDS |
| GAAGGTTATCACCAAGGGAG+AGG | 0.543577 | 7.2:+83444059 | MS.gene069421:CDS |
| CATTGCTGATCCTTCTCCAC+CGG | 0.544130 | 7.2:+83440713 | MS.gene069421:CDS |
| GAAACTCACCTCGGTTTCCA+TGG | 0.544875 | 7.2:-83444004 | None:intergenic |
| TTTGTTTGAATACACTAGAC+CGG | 0.547856 | 7.2:-83444094 | None:intergenic |
| GAGTTTCCTATTAGAGGTCG+TGG | 0.548261 | 7.2:+83444020 | MS.gene069421:CDS |
| CTTCTTCCCGAAGGAAACCT+AGG | 0.549762 | 7.2:-83443909 | None:intergenic |
| TCTTTCACATGAGAATTCGC+GGG | 0.549865 | 7.2:-83440738 | None:intergenic |
| TCGGGACTGGGAGTAGTTGG+AGG | 0.551746 | 7.2:-83440062 | None:intergenic |
| GGAGTGACTGTGCTTGTGAC+CGG | 0.552760 | 7.2:+83440415 | MS.gene069421:CDS |
| TAACCTTCTCCACGTCCACT+AGG | 0.554942 | 7.2:-83444044 | None:intergenic |
| GGTCGTCGAAATTTCGGTGG+TGG | 0.556525 | 7.2:+83443957 | MS.gene069421:CDS |
| CCCAAAAGGAAATTTGGTAC+CGG | 0.558103 | 7.2:+83441025 | MS.gene069421:CDS |
| AACCGTTGTCTTGTGGAGCA+AGG | 0.562293 | 7.2:-83440489 | None:intergenic |
| TGAGAATTCGCGGGGTCCGG+TGG | 0.567098 | 7.2:-83440729 | None:intergenic |
| TTTGCTGTTTCAGTTGGCGG+TGG | 0.568996 | 7.2:+83443867 | MS.gene069421:intron |
| GATAGACTAACTCCGGAGAA+TGG | 0.576363 | 7.2:-83440130 | None:intergenic |
| AGGAGTCTAGTGTGATAAGC+CGG | 0.577677 | 7.2:+83440162 | MS.gene069421:CDS |
| CAGAACTATCATTACTTTCG+GGG | 0.579630 | 7.2:-83441190 | None:intergenic |
| ATTCTCCGGAGTTAGTCTAT+CGG | 0.584311 | 7.2:+83440132 | MS.gene069421:CDS |
| GGTCGTGGTCCTAGTGGACG+TGG | 0.588716 | 7.2:+83444035 | MS.gene069421:CDS |
| GCTTCACCTATTGCTATTGG+GGG | 0.602708 | 7.2:+83443158 | MS.gene069421:CDS |
| TTCCTTGCTCCACAAGACAA+CGG | 0.602718 | 7.2:+83440487 | MS.gene069421:CDS |
| GATGCAGCACCGGATAATGT+TGG | 0.603557 | 7.2:+83441164 | MS.gene069421:CDS |
| ATTAGAGGTCGTGGTCCTAG+TGG | 0.604114 | 7.2:+83444029 | MS.gene069421:CDS |
| AGTAATGATAGTTCTGAGGA+AGG | 0.607670 | 7.2:+83441197 | MS.gene069421:CDS |
| CCTAGGTCTTCCAATACCCC+CGG | 0.610120 | 7.2:-83443892 | None:intergenic |
| GTGGAGAAGGTTATCACCAA+GGG | 0.612859 | 7.2:+83444054 | MS.gene069421:CDS |
| CGAAAGTAATGATAGTTCTG+AGG | 0.616610 | 7.2:+83441193 | MS.gene069421:CDS |
| TAAAACCGATAGACTAACTC+CGG | 0.620507 | 7.2:-83440137 | None:intergenic |
| GTTACTGTAACCTCAGAACC+AGG | 0.620655 | 7.2:+83440598 | MS.gene069421:CDS |
| TCACACCATTGGAATCAGGC+CGG | 0.622077 | 7.2:-83440181 | None:intergenic |
| CTTTCACATGAGAATTCGCG+GGG | 0.624026 | 7.2:-83440737 | None:intergenic |
| ACTGGGAGTAGTTGGAGGAG+CGG | 0.638601 | 7.2:-83440057 | None:intergenic |
| TGTCTGTCTTTGCAGCAGCA+GGG | 0.641292 | 7.2:+83441772 | MS.gene069421:intron |
| CTTCACCTATTGCTATTGGG+GGG | 0.642869 | 7.2:+83443159 | MS.gene069421:CDS |
| CACCAAGGGAGAGGAAGAGG+TGG | 0.647559 | 7.2:+83444068 | MS.gene069421:CDS |
| AGAGGTCGTCGAAATTTCGG+TGG | 0.651916 | 7.2:+83443954 | MS.gene069421:CDS |
| ATAAAGAGAACCACTGCCCG+AGG | 0.654446 | 7.2:+83443200 | MS.gene069421:CDS |
| ACTCCCAGTCCCGAAATGGT+TGG | 0.655892 | 7.2:+83440071 | MS.gene069421:CDS |
| CGTGGAGAAGGTTATCACCA+AGG | 0.656146 | 7.2:+83444053 | MS.gene069421:CDS |
| ATAAGCCGGCCTGATTCCAA+TGG | 0.659947 | 7.2:+83440176 | MS.gene069421:CDS |
| AACAATGACCATGGAAACCG+AGG | 0.662335 | 7.2:+83443996 | MS.gene069421:CDS |
| CTCTAATAGGAAACTCACCT+CGG | 0.674552 | 7.2:-83444013 | None:intergenic |
| GACCGGATGCTTGACTGGAA+AGG | 0.678649 | 7.2:+83440432 | MS.gene069421:CDS |
| TATGGGCGAAACAATGACCA+TGG | 0.679339 | 7.2:+83443987 | MS.gene069421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAACCTTTTATATAAT+CGG | + | chr7.2:83443792-83443811 | MS.gene069421:intron | 10.0% |
| !!! | AAATTCTTAATTTTCTTTTT+TGG | + | chr7.2:83443351-83443370 | MS.gene069421:intron | 10.0% |
| !! | AATAAAATTGTTAACTTTCA+TGG | - | chr7.2:83443849-83443868 | None:intergenic | 15.0% |
| !! | ACAAAATATAAAGATATTTC+AGG | - | chr7.2:83442094-83442113 | None:intergenic | 15.0% |
| !! | TGATTAACTACTAAAATTAT+AGG | - | chr7.2:83441887-83441906 | None:intergenic | 15.0% |
| !!! | AAATAACATAATTTTGGTTT+TGG | + | chr7.2:83442254-83442273 | MS.gene069421:intron | 15.0% |
| !!! | ATGATATTTTCTAAAGTATA+AGG | + | chr7.2:83442044-83442063 | MS.gene069421:intron | 15.0% |
| !!! | GAAACTTTTTTTTTTTAGAA+CGG | + | chr7.2:83443282-83443301 | MS.gene069421:intron | 15.0% |
| !!! | GTCTTTTGTAAATAATTTTT+TGG | - | chr7.2:83442800-83442819 | None:intergenic | 15.0% |
| !!! | TATGTTATTGCAAAATATTT+TGG | - | chr7.2:83441525-83441544 | None:intergenic | 15.0% |
| !!! | TTTTTTATCTAGAAAAGTTT+AGG | + | chr7.2:83441253-83441272 | MS.gene069421:intron | 15.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | + | chr7.2:83443638-83443657 | MS.gene069421:intron | 20.0% |
| !! | AAAGAAAAAGAAACTTGTAT+TGG | + | chr7.2:83442132-83442151 | MS.gene069421:intron | 20.0% |
| !! | AATAAGAAAACTTACTTTCA+TGG | - | chr7.2:83440222-83440241 | None:intergenic | 20.0% |
| !! | ACTAAAATTATAGGAATCTA+AGG | - | chr7.2:83441878-83441897 | None:intergenic | 20.0% |
| !! | AGTTCTATTGTATATGTTAA+GGG | - | chr7.2:83442518-83442537 | None:intergenic | 20.0% |
| !! | ATTATTCTTTAGACAATTGT+TGG | + | chr7.2:83442347-83442366 | MS.gene069421:intron | 20.0% |
| !! | TATTCATTGAATTTACTGAT+AGG | - | chr7.2:83441822-83441841 | None:intergenic | 20.0% |
| !! | TTACATATTACTAACAAACA+TGG | + | chr7.2:83441345-83441364 | MS.gene069421:intron | 20.0% |
| !! | TTTGTAGTTTGATAGATTAA+GGG | - | chr7.2:83442683-83442702 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTTTGGACAAA+GGG | + | chr7.2:83443359-83443378 | MS.gene069421:intron | 20.0% |
| !!! | AGTCACATATATTTTTATGT+TGG | + | chr7.2:83441911-83441930 | MS.gene069421:intron | 20.0% |
| !!! | TAATTTTCTTTTTTGGACAA+AGG | + | chr7.2:83443358-83443377 | MS.gene069421:intron | 20.0% |
| !!! | TAGTGTATTTTATCCTTTTT+TGG | + | chr7.2:83442449-83442468 | MS.gene069421:intron | 20.0% |
| !!! | TTTGTTACCGATTATATAAA+AGG | - | chr7.2:83443802-83443821 | None:intergenic | 20.0% |
| !!! | TTTTGTAGTTTGATAGATTA+AGG | - | chr7.2:83442684-83442703 | None:intergenic | 20.0% |
| ! | AAATTTGCCGTTAAATGTTA+CGG | + | chr7.2:83441592-83441611 | MS.gene069421:CDS | 25.0% |
| ! | AATAATACTACTTTCTACGA+AGG | - | chr7.2:83442333-83442352 | None:intergenic | 25.0% |
| ! | ATACAATTATCTTGTTAGTC+AGG | + | chr7.2:83442827-83442846 | MS.gene069421:intron | 25.0% |
| ! | ATACTAGAAGAGATAAGATT+AGG | + | chr7.2:83443460-83443479 | MS.gene069421:intron | 25.0% |
| ! | ATCTATAAAATCCTTTCAAC+TGG | + | chr7.2:83442396-83442415 | MS.gene069421:intron | 25.0% |
| ! | ATGAATATAAGAAACCATGT+TGG | - | chr7.2:83442883-83442902 | None:intergenic | 25.0% |
| ! | ATTAGTGACAGACATTAAAA+GGG | + | chr7.2:83442856-83442875 | MS.gene069421:intron | 25.0% |
| ! | ATTTCCAGAAAAACTTCATT+AGG | - | chr7.2:83441746-83441765 | None:intergenic | 25.0% |
| ! | CAATTATCTAACATAACTGT+TGG | + | chr7.2:83442942-83442961 | MS.gene069421:intron | 25.0% |
| ! | CTAGAAAAGTTTAGGTAAAT+TGG | + | chr7.2:83441261-83441280 | MS.gene069421:intron | 25.0% |
| ! | GAGTTCTATTGTATATGTTA+AGG | - | chr7.2:83442519-83442538 | None:intergenic | 25.0% |
| ! | GATTGAAGAAACAACATAAA+GGG | - | chr7.2:83441724-83441743 | None:intergenic | 25.0% |
| ! | TAAAGTATAAGGATCATATG+TGG | + | chr7.2:83442055-83442074 | MS.gene069421:intron | 25.0% |
| ! | TATAAACTAGAACACAGTAA+AGG | - | chr7.2:83442983-83443002 | None:intergenic | 25.0% |
| ! | TATTAGTGACAGACATTAAA+AGG | + | chr7.2:83442855-83442874 | MS.gene069421:intron | 25.0% |
| ! | TCAAAGCTTAAACAAAAACA+GGG | - | chr7.2:83440977-83440996 | None:intergenic | 25.0% |
| ! | TCTATAAAATCCTTTCAACT+GGG | + | chr7.2:83442397-83442416 | MS.gene069421:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr7.2:83443695-83443714 | MS.gene069421:intron | 25.0% |
| ! | TTCAAAGCTTAAACAAAAAC+AGG | - | chr7.2:83440978-83440997 | None:intergenic | 25.0% |
| ! | TTCAATGAATAATGCAATTC+AGG | + | chr7.2:83441831-83441850 | MS.gene069421:CDS | 25.0% |
| !! | AAACGAGTAAACAATTGTTT+TGG | + | chr7.2:83442625-83442644 | MS.gene069421:intron | 25.0% |
| !! | AAATCAGTTGTTATTGACAA+AGG | + | chr7.2:83443819-83443838 | MS.gene069421:intron | 25.0% |
| !! | AACAATGATGCTATTTAACA+TGG | + | chr7.2:83442164-83442183 | MS.gene069421:intron | 25.0% |
| !! | AGTTGAAAGGATTTTATAGA+TGG | - | chr7.2:83442397-83442416 | None:intergenic | 25.0% |
| !! | GATTCTTTCGCTAAATTTTA+AGG | + | chr7.2:83440342-83440361 | MS.gene069421:CDS | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr7.2:83443634-83443653 | None:intergenic | 25.0% |
| !! | TAGTTAGTTTCAAATTACCT+CGG | - | chr7.2:83443220-83443239 | None:intergenic | 25.0% |
| !! | TATTTTGTAATAAACTTGCC+TGG | - | chr7.2:83440619-83440638 | None:intergenic | 25.0% |
| !! | TTAAAAAGATTTAGAGCCAA+CGG | - | chr7.2:83440250-83440269 | None:intergenic | 25.0% |
| !!! | ACATTCTTTACAGTTTTAGT+TGG | - | chr7.2:83441065-83441084 | None:intergenic | 25.0% |
| !!! | AGGGAAAAATCATTTTTATC+AGG | - | chr7.2:83442499-83442518 | None:intergenic | 25.0% |
| !!! | ATTTTATTTGCTGTTTCAGT+TGG | + | chr7.2:83443861-83443880 | MS.gene069421:intron | 25.0% |
| !!! | GCACATCTTTTAATTTTTGA+AGG | + | chr7.2:83441490-83441509 | MS.gene069421:intron | 25.0% |
| !!! | TAACATAATTTTGGTTTTGG+TGG | + | chr7.2:83442257-83442276 | MS.gene069421:intron | 25.0% |
| !!! | TGTTTTTGAGTAGCTTTTTT+TGG | + | chr7.2:83443320-83443339 | MS.gene069421:intron | 25.0% |
| !!! | TTACCTTATTATTTCTGACT+TGG | - | chr7.2:83441673-83441692 | None:intergenic | 25.0% |
| !!! | TTTTCTCATTTTGTTTCTTC+AGG | + | chr7.2:83443136-83443155 | MS.gene069421:intron | 25.0% |
| AAACATTCTCAGCAACAATT+TGG | - | chr7.2:83440767-83440786 | None:intergenic | 30.0% | |
| AAATGAGAATGATGATTCTC+AGG | + | chr7.2:83440860-83440879 | MS.gene069421:CDS | 30.0% | |
| AAATGCATTACCAACCATTT+CGG | - | chr7.2:83440084-83440103 | None:intergenic | 30.0% | |
| AACTATTAGGAAAGACTTAG+AGG | + | chr7.2:83443651-83443670 | MS.gene069421:intron | 30.0% | |
| AATTCAGGTATGATCTTCAT+TGG | + | chr7.2:83441846-83441865 | MS.gene069421:intron | 30.0% | |
| AATTCGTCTCTAATTCTAAG+GGG | + | chr7.2:83440281-83440300 | MS.gene069421:intron | 30.0% | |
| AGAACATAGAACATAGCTTA+AGG | - | chr7.2:83443075-83443094 | None:intergenic | 30.0% | |
| AGATCAAACTGACTAACAAA+AGG | - | chr7.2:83442722-83442741 | None:intergenic | 30.0% | |
| ATAACACCATTAGAGAAAGT+TGG | + | chr7.2:83443484-83443503 | MS.gene069421:intron | 30.0% | |
| ATGAGAAAAAAGACGATGAA+AGG | - | chr7.2:83443125-83443144 | None:intergenic | 30.0% | |
| CATCCAAGTCAGAAATAATA+AGG | + | chr7.2:83441667-83441686 | MS.gene069421:CDS | 30.0% | |
| CTATAGTAGAAAATAGGCTT+AGG | + | chr7.2:83443515-83443534 | MS.gene069421:intron | 30.0% | |
| CTCAGAACTATCATTACTTT+CGG | - | chr7.2:83441195-83441214 | None:intergenic | 30.0% | |
| GAATTCGTCTCTAATTCTAA+GGG | + | chr7.2:83440280-83440299 | MS.gene069421:intron | 30.0% | |
| GCCTTGAATTATTTGTGTTT+GGG | + | chr7.2:83443095-83443114 | MS.gene069421:intron | 30.0% | |
| GGATTGAAGAAACAACATAA+AGG | - | chr7.2:83441725-83441744 | None:intergenic | 30.0% | |
| GTTCTGTAAAGAAACGTTAT+CGG | - | chr7.2:83440686-83440705 | None:intergenic | 30.0% | |
| TAAAGTCCCAAAAGGAAATT+TGG | + | chr7.2:83441019-83441038 | MS.gene069421:CDS | 30.0% | |
| TAACACCATTAGAGAAAGTT+GGG | + | chr7.2:83443485-83443504 | MS.gene069421:intron | 30.0% | |
| TAGCACCTATAGTAGAAAAT+AGG | + | chr7.2:83443509-83443528 | MS.gene069421:intron | 30.0% | |
| TCAGAACTATCATTACTTTC+GGG | - | chr7.2:83441194-83441213 | None:intergenic | 30.0% | |
| TCCCAAACACAAATAATTCA+AGG | - | chr7.2:83443099-83443118 | None:intergenic | 30.0% | |
| TGCCTTGAATTATTTGTGTT+TGG | + | chr7.2:83443094-83443113 | MS.gene069421:intron | 30.0% | |
| TTCATGATGTAATCTTGAGA+TGG | + | chr7.2:83442898-83442917 | MS.gene069421:intron | 30.0% | |
| TTCTCATTTGACTGAAAATC+AGG | - | chr7.2:83440849-83440868 | None:intergenic | 30.0% | |
| TTTAGGTAAATTGGATTCCT+GGG | + | chr7.2:83441270-83441289 | MS.gene069421:intron | 30.0% | |
| TTTCGAAATGATTCATTCAG+AGG | + | chr7.2:83443936-83443955 | MS.gene069421:CDS | 30.0% | |
| TTTGTTTGAATACACTAGAC+CGG | - | chr7.2:83444097-83444116 | None:intergenic | 30.0% | |
| ! | AGTTAGTTTCAAATTACCTC+GGG | - | chr7.2:83443219-83443238 | None:intergenic | 30.0% |
| ! | CAATCCTAATGAAGTTTTTC+TGG | + | chr7.2:83441739-83441758 | MS.gene069421:intron | 30.0% |
| ! | CTAAGCCTATTTTCTACTAT+AGG | - | chr7.2:83443517-83443536 | None:intergenic | 30.0% |
| ! | GTTTTCTTATTCAAAACCGT+TGG | + | chr7.2:83440231-83440250 | MS.gene069421:intron | 30.0% |
| ! | TAATGAGTTGGATCGAAATA+TGG | + | chr7.2:83443675-83443694 | MS.gene069421:intron | 30.0% |
| ! | TCTAGAGTAAGAAGAATACA+TGG | - | chr7.2:83441999-83442018 | None:intergenic | 30.0% |
| ! | TTTGAACGCTAATTTCAAGT+TGG | + | chr7.2:83441947-83441966 | MS.gene069421:intron | 30.0% |
| ! | TTTTGTGACTGAAATTGTTC+AGG | + | chr7.2:83440647-83440666 | MS.gene069421:intron | 30.0% |
| !! | CTCGTTTTATTCCAAATAGA+AGG | - | chr7.2:83442612-83442631 | None:intergenic | 30.0% |
| !! | TCGTTCTGAATGATGTTTTT+AGG | + | chr7.2:83440515-83440534 | MS.gene069421:CDS | 30.0% |
| !!! | AGTGCAATTGTTTGTTTTTG+TGG | + | chr7.2:83442301-83442320 | MS.gene069421:intron | 30.0% |
| AACACCATTAGAGAAAGTTG+GGG | + | chr7.2:83443486-83443505 | MS.gene069421:intron | 35.0% | |
| AATCACTTCTCTGTCTCAAA+AGG | + | chr7.2:83440890-83440909 | MS.gene069421:CDS | 35.0% | |
| AATGCATTACCAACCATTTC+GGG | - | chr7.2:83440083-83440102 | None:intergenic | 35.0% | |
| AGACTTAGAGGTTAATGAGT+TGG | + | chr7.2:83443663-83443682 | MS.gene069421:intron | 35.0% | |
| ATAGGCCAATCATCATTAAC+TGG | - | chr7.2:83440574-83440593 | None:intergenic | 35.0% | |
| ATTTCACGATAGAGAGAAAG+TGG | + | chr7.2:83442203-83442222 | MS.gene069421:intron | 35.0% | |
| CAAAACAGAAGACACTTTCA+AGG | - | chr7.2:83442775-83442794 | None:intergenic | 35.0% | |
| CAATCATCATTAACTGGATG+TGG | - | chr7.2:83440568-83440587 | None:intergenic | 35.0% | |
| CACATCCAGTTAATGATGAT+TGG | + | chr7.2:83440566-83440585 | MS.gene069421:CDS | 35.0% | |
| CAGAACTATCATTACTTTCG+GGG | - | chr7.2:83441193-83441212 | None:intergenic | 35.0% | |
| CGGCAAATTTCGAATGTAAA+TGG | - | chr7.2:83441582-83441601 | None:intergenic | 35.0% | |
| GAAGCAGAGTTTCAGAAATT+TGG | + | chr7.2:83441626-83441645 | MS.gene069421:CDS | 35.0% | |
| GGAATTCGTCTCTAATTCTA+AGG | + | chr7.2:83440279-83440298 | MS.gene069421:intron | 35.0% | |
| GTTTAGGTAAATTGGATTCC+TGG | + | chr7.2:83441269-83441288 | MS.gene069421:intron | 35.0% | |
| TAAAACCGATAGACTAACTC+CGG | - | chr7.2:83440140-83440159 | None:intergenic | 35.0% | |
| TAGAACATAGCTTAAGGACT+TGG | - | chr7.2:83443069-83443088 | None:intergenic | 35.0% | |
| TAGTAGAAAATAGGCTTAGG+TGG | + | chr7.2:83443518-83443537 | MS.gene069421:intron | 35.0% | |
| TGACTGAAAATCAGGTTCTA+CGG | - | chr7.2:83440841-83440860 | None:intergenic | 35.0% | |
| TGAGCAACCGTAACATTTAA+CGG | - | chr7.2:83441602-83441621 | None:intergenic | 35.0% | |
| TTCTTTCACATGAGAATTCG+CGG | - | chr7.2:83440742-83440761 | None:intergenic | 35.0% | |
| ! | CGAAAGTAATGATAGTTCTG+AGG | + | chr7.2:83441193-83441212 | MS.gene069421:CDS | 35.0% |
| ! | GCACTTTTACTGAAGAGTAA+TGG | - | chr7.2:83442553-83442572 | None:intergenic | 35.0% |
| ! | TTCTACGGTGTCTTCATTTT+CGG | - | chr7.2:83440826-83440845 | None:intergenic | 35.0% |
| !! | AGTAATGATAGTTCTGAGGA+AGG | + | chr7.2:83441197-83441216 | MS.gene069421:CDS | 35.0% |
| !! | GAAGCTTATTAGTTTGTTGC+AGG | + | chr7.2:83440995-83441014 | MS.gene069421:intron | 35.0% |
| !! | GTTTTGGTGGATATCATCAT+GGG | + | chr7.2:83442270-83442289 | MS.gene069421:intron | 35.0% |
| !! | TTATTTGCTGTTTCAGTTGG+CGG | + | chr7.2:83443864-83443883 | MS.gene069421:intron | 35.0% |
| !!! | ATCCTTTTTTGGCTGAAATG+TGG | + | chr7.2:83442460-83442479 | MS.gene069421:intron | 35.0% |
| !!! | CTTCTGTTTTTAACAGTCGA+GGG | + | chr7.2:83441551-83441570 | MS.gene069421:intron | 35.0% |
| !!! | CTTGAAAGTGTCTTCTGTTT+TGG | + | chr7.2:83442773-83442792 | MS.gene069421:intron | 35.0% |
| !!! | TCCTTTTTTGGCTGAAATGT+GGG | + | chr7.2:83442461-83442480 | MS.gene069421:intron | 35.0% |
| !!! | TTTTGGTTCTTGAATGCATG+AGG | + | chr7.2:83442642-83442661 | MS.gene069421:intron | 35.0% |
| AAATGTTACGGTTGCTCAGT+TGG | + | chr7.2:83441604-83441623 | MS.gene069421:CDS | 40.0% | |
| AACAAACATGGTTCTCACAC+CGG | + | chr7.2:83441357-83441376 | MS.gene069421:intron | 40.0% | |
| AACTGATGTCATCACACCAT+TGG | - | chr7.2:83440195-83440214 | None:intergenic | 40.0% | |
| ACCCACATTTCAGCCAAAAA+AGG | - | chr7.2:83442465-83442484 | None:intergenic | 40.0% | |
| ACGAAAAAACCGTTGTCTTG+TGG | - | chr7.2:83440499-83440518 | None:intergenic | 40.0% | |
| AGATGCTCAAAAATCGCACA+AGG | + | chr7.2:83440390-83440409 | MS.gene069421:CDS | 40.0% | |
| ATCGATGCATACGACTTCTT+TGG | - | chr7.2:83440921-83440940 | None:intergenic | 40.0% | |
| ATTCAAACCTAGGTCCTTGT+GGG | + | chr7.2:83441387-83441406 | MS.gene069421:intron | 40.0% | |
| CAACTATCTGCGTTTCATGA+TGG | - | chr7.2:83440803-83440822 | None:intergenic | 40.0% | |
| CATAGCTTAAGGACTTGGAA+TGG | - | chr7.2:83443064-83443083 | None:intergenic | 40.0% | |
| CCATATTCTTCACCATTCTC+CGG | + | chr7.2:83440118-83440137 | MS.gene069421:CDS | 40.0% | |
| CCCAAAAGGAAATTTGGTAC+CGG | + | chr7.2:83441025-83441044 | MS.gene069421:CDS | 40.0% | |
| CTCTAATAGGAAACTCACCT+CGG | - | chr7.2:83444016-83444035 | None:intergenic | 40.0% | |
| GAAGGATCAGCAATGTGAAT+CGG | - | chr7.2:83440708-83440727 | None:intergenic | 40.0% | |
| GAATTGACTAAGATCCCACA+AGG | - | chr7.2:83441404-83441423 | None:intergenic | 40.0% | |
| GACATGTCTAAGCACTTAGA+AGG | + | chr7.2:83442577-83442596 | MS.gene069421:intron | 40.0% | |
| GACATTAAAAGGGACCAACA+TGG | + | chr7.2:83442866-83442885 | MS.gene069421:intron | 40.0% | |
| GACTAACAAAAGGCGACTTT+AGG | - | chr7.2:83442712-83442731 | None:intergenic | 40.0% | |
| GAGGTTACAGTAACAGCAAT+AGG | - | chr7.2:83440592-83440611 | None:intergenic | 40.0% | |
| GCCAACTAATACTGTAAAGC+AGG | + | chr7.2:83441085-83441104 | MS.gene069421:CDS | 40.0% | |
| GCCTGCTTTACAGTATTAGT+TGG | - | chr7.2:83441089-83441108 | None:intergenic | 40.0% | |
| GCTTAAACAAAAACAGGGCT+TGG | - | chr7.2:83440972-83440991 | None:intergenic | 40.0% | |
| TAAGTGCTTAGACATGTCGT+TGG | - | chr7.2:83442575-83442594 | None:intergenic | 40.0% | |
| TCAGGTATGATCTTCATTGG+TGG | + | chr7.2:83441849-83441868 | MS.gene069421:intron | 40.0% | |
| TCTAAGCACTTAGAAGGATG+CGG | + | chr7.2:83442583-83442602 | MS.gene069421:intron | 40.0% | |
| TCTTTCACATGAGAATTCGC+GGG | - | chr7.2:83440741-83440760 | None:intergenic | 40.0% | |
| TGCGTTTCATGATGGTTAGA+AGG | - | chr7.2:83440795-83440814 | None:intergenic | 40.0% | |
| TTCAGAGGTCGTCGAAATTT+CGG | + | chr7.2:83443951-83443970 | MS.gene069421:CDS | 40.0% | |
| TTGCAGGTTAAAGTCCCAAA+AGG | + | chr7.2:83441011-83441030 | MS.gene069421:intron | 40.0% | |
| TTGTTGGACAGTACACATCT+TGG | + | chr7.2:83442363-83442382 | MS.gene069421:intron | 40.0% | |
| ! | AGGCTTCACCTATTGCTATT+GGG | + | chr7.2:83443156-83443175 | MS.gene069421:intron | 40.0% |
| ! | ATTCTCCGGAGTTAGTCTAT+CGG | + | chr7.2:83440132-83440151 | MS.gene069421:CDS | 40.0% |
| ! | CACTGTCTTTTTATGGTGCA+GGG | + | chr7.2:83440307-83440326 | MS.gene069421:intron | 40.0% |
| ! | CCGGTACCAAATTTCCTTTT+GGG | - | chr7.2:83441028-83441047 | None:intergenic | 40.0% |
| ! | GGGGATTCACTGTCTTTTTA+TGG | + | chr7.2:83440300-83440319 | MS.gene069421:intron | 40.0% |
| ! | TCACTGTCTTTTTATGGTGC+AGG | + | chr7.2:83440306-83440325 | MS.gene069421:intron | 40.0% |
| !! | AATAAACTTGCCTGGTTCTG+AGG | - | chr7.2:83440611-83440630 | None:intergenic | 40.0% |
| !! | GGTTTTGGTGGATATCATCA+TGG | + | chr7.2:83442269-83442288 | MS.gene069421:intron | 40.0% |
| !! | TTAACTGGATGTGGTTCTGA+AGG | - | chr7.2:83440559-83440578 | None:intergenic | 40.0% |
| !!! | GCTTCTGTTTTTAACAGTCG+AGG | + | chr7.2:83441550-83441569 | MS.gene069421:intron | 40.0% |
| !!! | GTTAGTCTATCGGTTTTACC+AGG | + | chr7.2:83440142-83440161 | MS.gene069421:CDS | 40.0% |
| !!! | TGCTTTTTGGCTAGTTGTTC+AGG | + | chr7.2:83442420-83442439 | MS.gene069421:intron | 40.0% |
| AAATTTGGACCGATCAAGCC+AGG | + | chr7.2:83441641-83441660 | MS.gene069421:CDS | 45.0% | |
| AACAATGACCATGGAAACCG+AGG | + | chr7.2:83443996-83444015 | MS.gene069421:CDS | 45.0% | |
| AAGGACCTAGGTTTGAATCC+CGG | - | chr7.2:83441385-83441404 | None:intergenic | 45.0% | |
| ACCAACCTACATTGGCACTT+CGG | + | chr7.2:83441436-83441455 | MS.gene069421:intron | 45.0% | |
| AGCAAGATCAGAAGAGGTAG+AGG | + | chr7.2:83443604-83443623 | MS.gene069421:intron | 45.0% | |
| AGGAGTCTAGTGTGATAAGC+CGG | + | chr7.2:83440162-83440181 | MS.gene069421:CDS | 45.0% | |
| ATCCTTTCCAGTCAAGCATC+CGG | - | chr7.2:83440437-83440456 | None:intergenic | 45.0% | |
| ATTACCAACCATTTCGGGAC+TGG | - | chr7.2:83440078-83440097 | None:intergenic | 45.0% | |
| CAGGCTTCACCTATTGCTAT+TGG | + | chr7.2:83443155-83443174 | MS.gene069421:intron | 45.0% | |
| CCAACTGAACCAACCTACAT+TGG | + | chr7.2:83441428-83441447 | MS.gene069421:intron | 45.0% | |
| CCGGAGAATGGTGAAGAATA+TGG | - | chr7.2:83440121-83440140 | None:intergenic | 45.0% | |
| CGAGGTGAGTTTCCTATTAG+AGG | + | chr7.2:83444014-83444033 | MS.gene069421:CDS | 45.0% | |
| CTTTCACATGAGAATTCGCG+GGG | - | chr7.2:83440740-83440759 | None:intergenic | 45.0% | |
| GAGAAGAGCAAGATCAGAAG+AGG | + | chr7.2:83443598-83443617 | MS.gene069421:intron | 45.0% | |
| GATAGACTAACTCCGGAGAA+TGG | - | chr7.2:83440133-83440152 | None:intergenic | 45.0% | |
| GATTCAAACCTAGGTCCTTG+TGG | + | chr7.2:83441386-83441405 | MS.gene069421:intron | 45.0% | |
| GCTACCCCAACTTTCTCTAA+TGG | - | chr7.2:83443493-83443512 | None:intergenic | 45.0% | |
| GCTCAAAAATCGCACAAGGA+AGG | + | chr7.2:83440394-83440413 | MS.gene069421:CDS | 45.0% | |
| GGATGCGGTATCCTTCTATT+TGG | + | chr7.2:83442598-83442617 | MS.gene069421:intron | 45.0% | |
| GTCATCACACCATTGGAATC+AGG | - | chr7.2:83440188-83440207 | None:intergenic | 45.0% | |
| GTGGAGAAGGTTATCACCAA+GGG | + | chr7.2:83444054-83444073 | MS.gene069421:CDS | 45.0% | |
| GTTACTGTAACCTCAGAACC+AGG | + | chr7.2:83440598-83440617 | MS.gene069421:CDS | 45.0% | |
| GTTGGCACATACACTTTAGC+CGG | - | chr7.2:83441047-83441066 | None:intergenic | 45.0% | |
| TATGGGCGAAACAATGACCA+TGG | + | chr7.2:83443987-83444006 | MS.gene069421:CDS | 45.0% | |
| TGGAAGACCTAGGTTTCCTT+CGG | + | chr7.2:83443902-83443921 | MS.gene069421:CDS | 45.0% | |
| TTACCAACCATTTCGGGACT+GGG | - | chr7.2:83440077-83440096 | None:intergenic | 45.0% | |
| TTCCTTGCTCCACAAGACAA+CGG | + | chr7.2:83440487-83440506 | MS.gene069421:CDS | 45.0% | |
| TTTCAAATTACCTCGGGCAG+TGG | - | chr7.2:83443213-83443232 | None:intergenic | 45.0% | |
| ! | CCTTTCAACTGGGTGCTTTT+TGG | + | chr7.2:83442407-83442426 | MS.gene069421:intron | 45.0% |
| ! | CTTCACCTATTGCTATTGGG+GGG | + | chr7.2:83443159-83443178 | MS.gene069421:CDS | 45.0% |
| ! | GCCGGTACCAAATTTCCTTT+TGG | - | chr7.2:83441029-83441048 | None:intergenic | 45.0% |
| ! | GCTTCACCTATTGCTATTGG+GGG | + | chr7.2:83443158-83443177 | MS.gene069421:CDS | 45.0% |
| ! | GGCTTCACCTATTGCTATTG+GGG | + | chr7.2:83443157-83443176 | MS.gene069421:intron | 45.0% |
| ! | TTGGTGGATATCATCATGGG+TGG | + | chr7.2:83442273-83442292 | MS.gene069421:intron | 45.0% |
| ! | TTTGACCGAAGTGCCAATGT+AGG | - | chr7.2:83441444-83441463 | None:intergenic | 45.0% |
| !! | CCAAAAAGCACCCAGTTGAA+AGG | - | chr7.2:83442410-83442429 | None:intergenic | 45.0% |
| !! | CCAATGTAGGTTGGTTCAGT+TGG | - | chr7.2:83441431-83441450 | None:intergenic | 45.0% |
| !! | GATGTGGTTCTGAAGGTTCA+GGG | - | chr7.2:83440552-83440571 | None:intergenic | 45.0% |
| !! | GTAGGTTGGTTCAGTTGGTA+AGG | - | chr7.2:83441426-83441445 | None:intergenic | 45.0% |
| !! | GTGCGATTTTTGAGCATCTG+CGG | - | chr7.2:83440389-83440408 | None:intergenic | 45.0% |
| !! | TTTCTGACTTGGATGCATCC+TGG | - | chr7.2:83441662-83441681 | None:intergenic | 45.0% |
| !!! | AAATCTTTTTAAAAAATTTA+GGG | + | chr7.2:83440258-83440277 | MS.gene069421:intron | 5.0% |
| !!! | ATATTAAAATAACATAATTT+TGG | + | chr7.2:83442248-83442267 | MS.gene069421:intron | 5.0% |
| !!! | TAAATCTTTTTAAAAAATTT+AGG | + | chr7.2:83440257-83440276 | MS.gene069421:intron | 5.0% |
| AACCGTTGTCTTGTGGAGCA+AGG | - | chr7.2:83440492-83440511 | None:intergenic | 50.0% | |
| AACTACTCCCAGTCCCGAAA+TGG | + | chr7.2:83440067-83440086 | MS.gene069421:CDS | 50.0% | |
| AAGCCTTCTCCCACTAAGTG+GGG | - | chr7.2:83443744-83443763 | None:intergenic | 50.0% | |
| AGAGGTCGTCGAAATTTCGG+TGG | + | chr7.2:83443954-83443973 | MS.gene069421:CDS | 50.0% | |
| AGGTTTCCTTCGGGAAGAAG+TGG | + | chr7.2:83443912-83443931 | MS.gene069421:CDS | 50.0% | |
| ATAAAGAGAACCACTGCCCG+AGG | + | chr7.2:83443200-83443219 | MS.gene069421:CDS | 50.0% | |
| ATAAGCCGGCCTGATTCCAA+TGG | + | chr7.2:83440176-83440195 | MS.gene069421:CDS | 50.0% | |
| ATTGGATTCCTGGGTTCACC+AGG | + | chr7.2:83441279-83441298 | MS.gene069421:intron | 50.0% | |
| ATTTCGGGACTGGGAGTAGT+TGG | - | chr7.2:83440068-83440087 | None:intergenic | 50.0% | |
| CAAGCCTTCTCCCACTAAGT+GGG | - | chr7.2:83443745-83443764 | None:intergenic | 50.0% | |
| CAGCAGCAGGGATACTGTTT+CGG | + | chr7.2:83441784-83441803 | MS.gene069421:intron | 50.0% | |
| CATTGCTGATCCTTCTCCAC+CGG | + | chr7.2:83440713-83440732 | MS.gene069421:CDS | 50.0% | |
| CGAAATCCACTTCTTCCCGA+AGG | - | chr7.2:83443921-83443940 | None:intergenic | 50.0% | |
| CGTGGAGAAGGTTATCACCA+AGG | + | chr7.2:83444053-83444072 | MS.gene069421:CDS | 50.0% | |
| CTAAGATCCCACAAGGACCT+AGG | - | chr7.2:83441397-83441416 | None:intergenic | 50.0% | |
| CTTCTTCCCGAAGGAAACCT+AGG | - | chr7.2:83443912-83443931 | None:intergenic | 50.0% | |
| GAAACTCACCTCGGTTTCCA+TGG | - | chr7.2:83444007-83444026 | None:intergenic | 50.0% | |
| GAAGGTTATCACCAAGGGAG+AGG | + | chr7.2:83444059-83444078 | MS.gene069421:CDS | 50.0% | |
| GGAAGACCTAGGTTTCCTTC+GGG | + | chr7.2:83443903-83443922 | MS.gene069421:CDS | 50.0% | |
| GGACAGTACACATCTTGGTG+TGG | + | chr7.2:83442368-83442387 | MS.gene069421:intron | 50.0% | |
| GGCTTATCACACTAGACTCC+TGG | - | chr7.2:83440163-83440182 | None:intergenic | 50.0% | |
| TAACCTTCTCCACGTCCACT+AGG | - | chr7.2:83444047-83444066 | None:intergenic | 50.0% | |
| TATCACCAAGGGAGAGGAAG+AGG | + | chr7.2:83444065-83444084 | MS.gene069421:CDS | 50.0% | |
| TCACACCATTGGAATCAGGC+CGG | - | chr7.2:83440184-83440203 | None:intergenic | 50.0% | |
| TCGGGGTTGCCAACATTATC+CGG | - | chr7.2:83441176-83441195 | None:intergenic | 50.0% | |
| TGTCTGTCTTTGCAGCAGCA+GGG | + | chr7.2:83441772-83441791 | MS.gene069421:intron | 50.0% | |
| TTGGATTCCTGGGTTCACCA+GGG | + | chr7.2:83441280-83441299 | MS.gene069421:intron | 50.0% | |
| TTTAAGCGCTCTCTGAGCCT+TGG | - | chr7.2:83441318-83441337 | None:intergenic | 50.0% | |
| ! | ACCGAAGTGCCAATGTAGGT+TGG | - | chr7.2:83441440-83441459 | None:intergenic | 50.0% |
| ! | GATGCAGCACCGGATAATGT+TGG | + | chr7.2:83441164-83441183 | MS.gene069421:CDS | 50.0% |
| ! | GTCGAAATTTCGGTGGTGGT+CGG | + | chr7.2:83443961-83443980 | MS.gene069421:CDS | 50.0% |
| ! | TCGAAATTTCGGTGGTGGTC+GGG | + | chr7.2:83443962-83443981 | MS.gene069421:CDS | 50.0% |
| ! | TGGATGCATCCTGGCTTGAT+CGG | - | chr7.2:83441653-83441672 | None:intergenic | 50.0% |
| !! | ACATTATCCGGTGCTGCATC+AGG | - | chr7.2:83441164-83441183 | None:intergenic | 50.0% |
| !! | GGATGTGGTTCTGAAGGTTC+AGG | - | chr7.2:83440553-83440572 | None:intergenic | 50.0% |
| !! | TTTGCTGTTTCAGTTGGCGG+TGG | + | chr7.2:83443867-83443886 | MS.gene069421:intron | 50.0% |
| ACATGAGAATTCGCGGGGTC+CGG | - | chr7.2:83440735-83440754 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7.2:83443732-83443751 | None:intergenic | 55.0% | |
| ACTCCCAGTCCCGAAATGGT+TGG | + | chr7.2:83440071-83440090 | MS.gene069421:CDS | 55.0% | |
| ACTGGGAGTAGTTGGAGGAG+CGG | - | chr7.2:83440060-83440079 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7.2:83443731-83443750 | MS.gene069421:intron | 55.0% | |
| CCAAGCCTTCTCCCACTAAG+TGG | - | chr7.2:83443746-83443765 | None:intergenic | 55.0% | |
| CCACTTAGTGGGAGAAGGCT+TGG | + | chr7.2:83443743-83443762 | MS.gene069421:intron | 55.0% | |
| CCTAGGTCTTCCAATACCCC+CGG | - | chr7.2:83443895-83443914 | None:intergenic | 55.0% | |
| CTAGGTTTGAATCCCGGTGC+CGG | - | chr7.2:83441379-83441398 | None:intergenic | 55.0% | |
| CTTCTCCCACTAAGTGGGGT+CGG | - | chr7.2:83443740-83443759 | None:intergenic | 55.0% | |
| CTTGTGACCGGATGCTTGAC+TGG | + | chr7.2:83440427-83440446 | MS.gene069421:CDS | 55.0% | |
| GACCGGATGCTTGACTGGAA+AGG | + | chr7.2:83440432-83440451 | MS.gene069421:CDS | 55.0% | |
| GGAGTGACTGTGCTTGTGAC+CGG | + | chr7.2:83440415-83440434 | MS.gene069421:CDS | 55.0% | |
| GGTCGTCGAAATTTCGGTGG+TGG | + | chr7.2:83443957-83443976 | MS.gene069421:CDS | 55.0% | |
| GTGTCTGTCTTTGCAGCAGC+AGG | + | chr7.2:83441771-83441790 | MS.gene069421:intron | 55.0% | |
| TGACGCCCCCCAATAGCAAT+AGG | - | chr7.2:83443167-83443186 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7.2:83443732-83443751 | MS.gene069421:intron | 55.0% | |
| ! | CGAAATTTCGGTGGTGGTCG+GGG | + | chr7.2:83443963-83443982 | MS.gene069421:CDS | 55.0% |
| ! | CTGAGCCTTGGCGCTTTTCT+TGG | - | chr7.2:83441306-83441325 | None:intergenic | 55.0% |
| !! | GGCTCAGAGAGCGCTTAAAG+AGG | + | chr7.2:83441319-83441338 | MS.gene069421:intron | 55.0% |
| AGTCCCGTTGCCACCGAATG+AGG | + | chr7.2:83444116-83444135 | MS.gene069421:CDS | 60.0% | |
| ATGGTTCTCACACCGGCACC+GGG | + | chr7.2:83441364-83441383 | MS.gene069421:intron | 60.0% | |
| CAAGGGAGAGGAAGAGGTGG+CGG | + | chr7.2:83444071-83444090 | MS.gene069421:CDS | 60.0% | |
| CACCAAGGGAGAGGAAGAGG+TGG | + | chr7.2:83444068-83444087 | MS.gene069421:CDS | 60.0% | |
| CATGGTTCTCACACCGGCAC+CGG | + | chr7.2:83441363-83441382 | MS.gene069421:intron | 60.0% | |
| CGACCCCACTTAGTGGGAGA+AGG | + | chr7.2:83443738-83443757 | MS.gene069421:intron | 60.0% | |
| GTTTCAGTTGGCGGTGGCAC+CGG | + | chr7.2:83443873-83443892 | MS.gene069421:intron | 60.0% | |
| TCGGGACTGGGAGTAGTTGG+AGG | - | chr7.2:83440065-83440084 | None:intergenic | 60.0% | |
| TGCAGTGCCTGATGCAGCAC+CGG | + | chr7.2:83441154-83441173 | MS.gene069421:CDS | 60.0% | |
| TTCTTGGCCCTGGTGAACCC+AGG | - | chr7.2:83441290-83441309 | None:intergenic | 60.0% | |
| TTTCAGTTGGCGGTGGCACC+GGG | + | chr7.2:83443874-83443893 | MS.gene069421:intron | 60.0% | |
| ! | CGGCACCGGGATTCAAACCT+AGG | + | chr7.2:83441377-83441396 | MS.gene069421:intron | 60.0% |
| ! | CTTGGCGCTTTTCTTGGCCC+TGG | - | chr7.2:83441300-83441319 | None:intergenic | 60.0% |
| ! | GGTCCTAGTGGACGTGGAGA+AGG | + | chr7.2:83444041-83444060 | MS.gene069421:CDS | 60.0% |
| !! | CAGGGCCAAGAAAAGCGCCA+AGG | + | chr7.2:83441298-83441317 | MS.gene069421:intron | 60.0% |
| !! | CCGGGGGTATTGGAAGACCT+AGG | + | chr7.2:83443892-83443911 | MS.gene069421:CDS | 60.0% |
| CGCCACCTCTTCCTCTCCCT+TGG | - | chr7.2:83444073-83444092 | None:intergenic | 65.0% | |
| TGAGAATTCGCGGGGTCCGG+TGG | - | chr7.2:83440732-83440751 | None:intergenic | 65.0% | |
| TTCAGTTGGCGGTGGCACCG+GGG | + | chr7.2:83443875-83443894 | MS.gene069421:intron | 65.0% | |
| ! | TCGGTGGTGGTCGGGGCTAT+GGG | + | chr7.2:83443970-83443989 | MS.gene069421:CDS | 65.0% |
| ! | TTCGGTGGTGGTCGGGGCTA+TGG | + | chr7.2:83443969-83443988 | MS.gene069421:CDS | 65.0% |
| TTCGCGGGGTCCGGTGGAGA+AGG | - | chr7.2:83440726-83440745 | None:intergenic | 70.0% | |
| ! | GGAGAGGAAGAGGTGGCGGC+CGG | + | chr7.2:83444075-83444094 | MS.gene069421:CDS | 70.0% |
| ! | TCAGTTGGCGGTGGCACCGG+GGG | + | chr7.2:83443876-83443895 | MS.gene069421:intron | 70.0% |
| ! | GGCGGTGGCACCGGGGGTAT+TGG | + | chr7.2:83443882-83443901 | MS.gene069421:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 83440041 | 83444136 | 83440041 | ID=MS.gene069421 |
| chr7.2 | mRNA | 83440041 | 83444136 | 83440041 | ID=MS.gene069421.t1;Parent=MS.gene069421 |
| chr7.2 | exon | 83440041 | 83440226 | 83440041 | ID=MS.gene069421.t1.exon1;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83440041 | 83440226 | 83440041 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83440328 | 83440619 | 83440328 | ID=MS.gene069421.t1.exon2;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83440328 | 83440619 | 83440328 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83440703 | 83440941 | 83440703 | ID=MS.gene069421.t1.exon3;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83440703 | 83440941 | 83440703 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83441017 | 83441218 | 83441017 | ID=MS.gene069421.t1.exon4;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83441017 | 83441218 | 83441017 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83441567 | 83441688 | 83441567 | ID=MS.gene069421.t1.exon5;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83441567 | 83441688 | 83441567 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83441787 | 83441852 | 83441787 | ID=MS.gene069421.t1.exon6;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83441787 | 83441852 | 83441787 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83443158 | 83443221 | 83443158 | ID=MS.gene069421.t1.exon7;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83443158 | 83443221 | 83443158 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| chr7.2 | exon | 83443880 | 83444136 | 83443880 | ID=MS.gene069421.t1.exon8;Parent=MS.gene069421.t1 |
| chr7.2 | CDS | 83443880 | 83444136 | 83443880 | ID=cds.MS.gene069421.t1;Parent=MS.gene069421.t1 |
| Gene Sequence |
| Protein sequence |
