AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069595


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069595.t1 MTR_8g099550 99.508 610 3 0 1 610 1 610 0.0 1248
MS.gene069595.t1 MTR_5g009150 89.853 611 61 1 1 610 1 611 0.0 1152
MS.gene069595.t1 MTR_8g027675 83.553 608 99 1 1 608 1 607 0.0 1077
MS.gene069595.t1 MTR_4g098920 67.541 610 193 2 1 609 1 606 0.0 897
MS.gene069595.t1 MTR_8g105580 66.505 618 191 4 1 608 4 615 0.0 890
MS.gene069595.t1 MTR_7g451010 67.974 612 192 2 1 608 4 615 0.0 887
MS.gene069595.t1 MTR_8g009510 66.139 632 190 2 1 608 4 635 0.0 887
MS.gene069595.t1 MTR_1g032550 67.047 613 195 2 1 608 4 614 0.0 887
MS.gene069595.t1 MTR_8g105580 67.474 578 172 4 1 568 4 575 0.0 840
MS.gene069595.t1 MTR_8g009510 65.465 527 161 1 103 608 2 528 0.0 734
MS.gene069595.t1 MTR_2g009690 39.596 495 278 6 4 489 24 506 6.61e-106 338
MS.gene069595.t1 MTR_4g093750 38.742 493 281 5 4 487 15 495 9.74e-101 322
MS.gene069595.t1 MTR_4g093750 38.259 494 286 4 4 488 15 498 4.56e-100 321
MS.gene069595.t1 MTR_4g030140 29.808 520 318 12 1 495 4 501 1.48e-58 211
MS.gene069595.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.86e-58 208
MS.gene069595.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 1.24e-57 208
MS.gene069595.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.47e-57 207
MS.gene069595.t1 MTR_4g134680 33.333 201 134 0 295 495 1 201 1.12e-32 133
MS.gene069595.t1 MTR_8g087770 42.632 190 99 3 34 219 68 251 4.84e-32 132
MS.gene069595.t1 MTR_8g087750 33.546 313 190 8 34 340 71 371 8.30e-31 128
MS.gene069595.t1 MTR_8g463270 26.331 338 217 6 9 326 31 356 1.25e-18 90.5
MS.gene069595.t1 MTR_4g094300 27.723 202 135 5 21 214 28 226 1.43e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069595.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene069595.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene069595.t1 AT5G42080 85.902 610 80 1 1 610 1 604 0.0 1107
MS.gene069595.t1 AT3G61760 82.651 611 104 2 1 610 1 610 0.0 1071
MS.gene069595.t1 AT3G61760 83.831 569 90 2 1 568 1 568 0.0 1010
MS.gene069595.t1 AT3G60190 67.690 619 189 2 1 608 4 622 0.0 910
MS.gene069595.t1 AT1G14830 68.791 612 185 3 1 608 4 613 0.0 907
MS.gene069595.t1 AT2G44590 63.948 613 217 3 1 610 1 612 0.0 852
MS.gene069595.t1 AT2G44590 61.375 611 215 4 1 608 1 593 0.0 808
MS.gene069595.t1 AT2G44590 61.275 612 215 5 1 608 1 594 0.0 804
MS.gene069595.t1 AT5G42080 88.345 429 50 0 1 429 1 429 0.0 804
MS.gene069595.t1 AT3G61760 84.270 445 68 2 1 444 1 444 0.0 795
MS.gene069595.t1 AT2G14120 36.273 499 293 7 3 487 20 507 1.35e-93 304
MS.gene069595.t1 AT2G14120 36.128 501 295 7 3 489 20 509 4.15e-93 303
MS.gene069595.t1 AT2G14120 36.273 499 293 7 3 487 20 507 4.51e-93 303
MS.gene069595.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.23e-92 303
MS.gene069595.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.36e-92 303
MS.gene069595.t1 AT2G14120 34.659 528 291 9 3 487 20 536 9.88e-89 293
MS.gene069595.t1 AT1G59610 30.561 517 315 14 1 495 4 498 1.22e-61 220
MS.gene069595.t1 AT1G10290 30.250 519 314 13 1 495 4 498 8.56e-61 218
MS.gene069595.t1 AT1G60500 29.810 473 284 14 34 483 65 512 2.37e-39 154
MS.gene069595.t1 AT1G60530 46.524 187 96 3 34 219 62 245 3.09e-39 146
MS.gene069595.t1 AT1G53140 31.651 218 120 5 9 214 47 247 1.77e-18 90.1

Find 151 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTTCATTCGCTATTAA+AGG 0.155423 4.4:-4779120 MS.gene069595:intron
AGGAAAAGATTCACCGATTT+TGG 0.158213 4.4:-4783393 MS.gene069595:intron
GCAGCCGAACTGTATAATTT+TGG 0.190369 4.4:-4781738 MS.gene069595:intron
GAATGAGGATCCTGCAATTA+TGG 0.256115 4.4:-4777015 MS.gene069595:CDS
AAGCCTGTTGCAGCTGATGC+TGG 0.280429 4.4:-4780107 MS.gene069595:CDS
TGAAACCGAACTGGCTCGTT+TGG 0.280984 4.4:-4780132 MS.gene069595:CDS
CTGGTTTACGGGCTGAGGTT+GGG 0.283613 4.4:-4777827 MS.gene069595:CDS
GTCGTTGGTGGCCAGAGTTC+TGG 0.296472 4.4:-4783631 MS.gene069595:CDS
TTAGCTAGGTGTTTATATTC+AGG 0.300523 4.4:+4780378 None:intergenic
CTAAGGCGGTGCAAGCTCTT+TGG 0.312942 4.4:+4783713 None:intergenic
TTTGACGAAGATTGATCTAA+TGG 0.319005 4.4:-4781372 MS.gene069595:CDS
ATCTGACGGTTGATTTCTTT+CGG 0.331884 4.4:-4777722 MS.gene069595:CDS
TGAAGCAATACCCTGGTTTA+CGG 0.336223 4.4:-4777839 MS.gene069595:CDS
CAGAATGGGGTCTGAGCATC+TGG 0.343447 4.4:-4780355 MS.gene069595:CDS
TGTGCATGATATTGAGAATA+TGG 0.345216 4.4:-4782617 MS.gene069595:CDS
TAGTGCACTCCCTACTCTTT+GGG 0.348707 4.4:-4783674 MS.gene069595:CDS
CTAGTGCACTCCCTACTCTT+TGG 0.351916 4.4:-4783675 MS.gene069595:CDS
GATATAATGATTCTTATCTA+AGG 0.354606 4.4:-4777644 MS.gene069595:CDS
AGGGACAGTTGAAATTTGTT+TGG 0.356007 4.4:+4783049 None:intergenic
GAATATATGCTAAGATGAAT+AGG 0.359659 4.4:+4783029 None:intergenic
AGCTTTCAATGGAAAATATA+AGG 0.374495 4.4:-4779587 MS.gene069595:CDS
AGACTGAATGCCTGGAATCT+TGG 0.385851 4.4:+4780181 None:intergenic
TTGACACTCATCGATCTTCC+TGG 0.386900 4.4:-4782792 MS.gene069595:CDS
TGGTTTACGGGCTGAGGTTG+GGG 0.387468 4.4:-4777826 MS.gene069595:CDS
GAAGCAATACCCTGGTTTAC+GGG 0.387693 4.4:-4777838 MS.gene069595:CDS
GCATCAACAGCTGCCTCGGC+AGG 0.388371 4.4:+4779465 None:intergenic
CCTGGTTTACGGGCTGAGGT+TGG 0.394247 4.4:-4777828 MS.gene069595:CDS
AACTGCATCTATTTCAGCTT+GGG 0.397169 4.4:+4776947 None:intergenic
AAAAGAAAAGTTACCAAAAT+CGG 0.399826 4.4:+4783380 None:intergenic
AATCCACTCTAGTTACAATC+AGG 0.400990 4.4:-4779491 MS.gene069595:CDS
GTTTGACAAGCAGCTTTCAA+TGG 0.401921 4.4:-4779598 MS.gene069595:CDS
CAAAGAGCTTGCACCGCCTT+AGG 0.402102 4.4:-4783712 MS.gene069595:CDS
AACACTACAACTGGTCGATA+TGG 0.405406 4.4:-4777754 MS.gene069595:CDS
GAAACCGAACTGGCTCGTTT+GGG 0.407691 4.4:-4780131 MS.gene069595:CDS
CTAATTAGAGACTGAATGCC+TGG 0.416975 4.4:+4780173 None:intergenic
GATTTCTTACCTCGTGGATC+AGG 0.421686 4.4:-4783574 MS.gene069595:intron
AAACACCTAGCTAACAGAAT+GGG 0.429971 4.4:-4780369 MS.gene069595:CDS
CTTTCCCAAACGAGCCAGTT+CGG 0.441013 4.4:+4780127 None:intergenic
ACCCCAGCATCAGCTGCAAC+AGG 0.443010 4.4:+4780104 None:intergenic
ATATTCAAAGACCATCTTGA+TGG 0.447318 4.4:-4779790 MS.gene069595:CDS
CCATTGTTTATTGTCAAGTA+CGG 0.448290 4.4:-4777267 MS.gene069595:CDS
CAAAAGGGCAACACTACAAC+TGG 0.449599 4.4:-4777763 MS.gene069595:CDS
CAAAGCTGTTAGTGAGACTC+TGG 0.449716 4.4:-4779087 MS.gene069595:intron
GAATGAGAGATGAAAGCAAA+AGG 0.450845 4.4:-4777779 MS.gene069595:CDS
CACTAACAGCTTTGTGAACC+AGG 0.457295 4.4:+4779096 None:intergenic
CCTGCTATCGCCGTCGTTGG+TGG 0.458671 4.4:-4783643 MS.gene069595:CDS
TTCTGGAAAATCCTCCGTAT+TGG 0.463410 4.4:-4783614 MS.gene069595:CDS
AGCCTGTTGCAGCTGATGCT+GGG 0.466361 4.4:-4780106 MS.gene069595:CDS
CCAACCTCAGCCCGTAAACC+AGG 0.468070 4.4:+4777828 None:intergenic
CAGACCCCATTCTGTTAGCT+AGG 0.470784 4.4:+4780364 None:intergenic
TCCGTATTGGAGAGTGTTGT+CGG 0.471538 4.4:-4783601 MS.gene069595:CDS
AATATATGCTAAGATGAATA+GGG 0.472521 4.4:+4783030 None:intergenic
AGCTCCCTGCTGCTCTGAAA+AGG 0.472526 4.4:-4779626 MS.gene069595:CDS
CATATAGGTTAAAGTTCCCT+TGG 0.473662 4.4:-4780494 MS.gene069595:CDS
AAATGAAATTGAAACCGAAC+TGG 0.477658 4.4:-4780141 MS.gene069595:CDS
GAAGGAAATTCAAGATGAAA+CGG 0.484800 4.4:-4783090 MS.gene069595:CDS
CTGAAATAGATGCAGTTGCT+TGG 0.485487 4.4:-4776941 MS.gene069595:CDS
TGAAATTTGTTTGGATCGAC+CGG 0.492583 4.4:+4783058 None:intergenic
TTGCTTGCTCAGATGTTGGA+AGG 0.493499 4.4:-4780522 MS.gene069595:intron
AGACGACGGTATCCTTGCTC+TGG 0.498380 4.4:+4779519 None:intergenic
CTACGACGTTCCATAATTGC+AGG 0.498628 4.4:+4777005 None:intergenic
CAACTGGTCGATATGGAGTC+TGG 0.501050 4.4:-4777747 MS.gene069595:CDS
GTAATCAAGTCCAAGATTCC+AGG 0.501222 4.4:-4780191 MS.gene069595:CDS
CAACTGCATCTATTTCAGCT+TGG 0.501627 4.4:+4776946 None:intergenic
TTTGTCCTCATTACTGAATG+AGG 0.502603 4.4:-4777030 MS.gene069595:CDS
TATTTGTAGGGATCGTTACT+CGG 0.504045 4.4:-4783488 MS.gene069595:intron
ATAGCCAAAATTATACAGTT+CGG 0.504975 4.4:+4781734 None:intergenic
ATACCCTGGTTTACGGGCTG+AGG 0.506554 4.4:-4777832 MS.gene069595:CDS
CCACCAACGACGGCGATAGC+AGG 0.509781 4.4:+4783643 None:intergenic
CATTGTTTATTGTCAAGTAC+GGG 0.511383 4.4:-4777266 MS.gene069595:CDS
TACCGGTAGGATCCACTTCA+CGG 0.512959 4.4:+4781663 None:intergenic
TGTTGGAAGGGAGAGCATAT+AGG 0.515104 4.4:-4780509 MS.gene069595:CDS
CTGAGTTTCTTCACCTTCCG+AGG 0.516849 4.4:-4783413 MS.gene069595:CDS
GATTCTTATCTAAGGCGAAT+CGG 0.517945 4.4:-4777636 MS.gene069595:intron
GATGAAACGGATAGAGAAAC+CGG 0.518246 4.4:-4783077 MS.gene069595:CDS
TGCTTGCTCAGATGTTGGAA+GGG 0.521748 4.4:-4780521 MS.gene069595:intron
CCACCCTTGTCCACATCTTG+AGG 0.522131 4.4:+4777693 None:intergenic
AATTAAAATTTCCCGTGAAG+TGG 0.523008 4.4:-4781675 MS.gene069595:CDS
TACCGCATCAACAGCTGCCT+CGG 0.523525 4.4:+4779461 None:intergenic
TAAACACCTAGCTAACAGAA+TGG 0.524545 4.4:-4780370 MS.gene069595:CDS
GGGCAAGTTATATGCAATCA+TGG 0.524553 4.4:-4779836 MS.gene069595:CDS
TAGTGGCCTTGCAAAGAGAC+TGG 0.526892 4.4:-4776985 MS.gene069595:CDS
TCAATTTCCTACAGGCGACC+TGG 0.527613 4.4:-4779681 MS.gene069595:intron
GGAAGAGAATCCCAAAGAGT+AGG 0.528008 4.4:+4783664 None:intergenic
AGATTCACCGTGGTCACCTA+AGG 0.530232 4.4:+4783696 None:intergenic
ATATCATGCACAATACTCTC+AGG 0.530313 4.4:+4782628 None:intergenic
TTGTGTAGCTGCGGTGAGGA+AGG 0.537663 4.4:-4783108 MS.gene069595:intron
TGACACTCATCGATCTTCCT+GGG 0.537665 4.4:-4782791 MS.gene069595:CDS
CAGTAATGAGGACAAACGCT+TGG 0.541024 4.4:+4777037 None:intergenic
GTTGCAATATCTTGATTAGC+CGG 0.541684 4.4:+4781707 None:intergenic
GCCGACAACACTCTCCAATA+CGG 0.542785 4.4:+4783600 None:intergenic
GAAGAGAATCCCAAAGAGTA+GGG 0.542886 4.4:+4783665 None:intergenic
CTATTTCAGCTTGGGCACTT+CGG 0.542999 4.4:+4776955 None:intergenic
CTTCCTGCTATCGCCGTCGT+TGG 0.543291 4.4:-4783646 MS.gene069595:CDS
TGCCGAGGCAGCTGTTGATG+CGG 0.543898 4.4:-4779463 MS.gene069595:intron
CAGCTTCACAAGAGTGATGA+GGG 0.550682 4.4:-4783450 MS.gene069595:CDS
GAACATTACCTTCTCAATGT+AGG 0.558262 4.4:+4782588 None:intergenic
TCATTCGCTATTAAAGGACC+TGG 0.558428 4.4:-4779114 MS.gene069595:CDS
AGGTTAAAGTTCCCTTGGAT+CGG 0.560301 4.4:-4780489 MS.gene069595:CDS
AATGAGAGATGAAAGCAAAA+GGG 0.561742 4.4:-4777778 MS.gene069595:CDS
AAACTTATTACAGAAGCTGA+TGG 0.561888 4.4:-4779564 MS.gene069595:CDS
TACAATCAGGGGCCCTGCCG+AGG 0.565034 4.4:-4779478 MS.gene069595:CDS
CATCTTATTGCTCCAGAGCA+AGG 0.566493 4.4:-4779531 MS.gene069595:CDS
CATCAACAGCTGCCTCGGCA+GGG 0.569211 4.4:+4779466 None:intergenic
TCGGAAGCTTCCTCAAGATG+TGG 0.572910 4.4:-4777703 MS.gene069595:CDS
CTGTTCACAACACCGATCCA+AGG 0.576821 4.4:+4780477 None:intergenic
CGATCTTCCTGGGCTTACGA+AGG 0.578446 4.4:-4782781 MS.gene069595:CDS
CTGGAGCAATAAGATGAGGT+TGG 0.582750 4.4:+4779538 None:intergenic
TGACAATAAACAATGGACTT+CGG 0.583582 4.4:+4777274 None:intergenic
AGGATCCTCATTCAGTAATG+AGG 0.586057 4.4:+4777025 None:intergenic
GGCAAAGATTTCTTACCTCG+TGG 0.586975 4.4:-4783580 MS.gene069595:CDS
CTTAGCATATATTCTCCCAA+TGG 0.587409 4.4:-4783020 MS.gene069595:intron
TCCCGTGAAGTGGATCCTAC+CGG 0.593357 4.4:-4781665 MS.gene069595:intron
TTGTGAAGCTGCAAAACAAG+TGG 0.596364 4.4:+4783462 None:intergenic
AATCTTCGTCAAAACTCCAA+TGG 0.598241 4.4:+4781382 None:intergenic
GCCCCTGATTGTAACTAGAG+TGG 0.598316 4.4:+4779488 None:intergenic
GCAGCTTCACAAGAGTGATG+AGG 0.600736 4.4:-4783451 MS.gene069595:CDS
ACAGCGACCTTCGTAAGCCC+AGG 0.603913 4.4:+4782774 None:intergenic
ATCCACTCTAGTTACAATCA+GGG 0.605709 4.4:-4779490 MS.gene069595:CDS
ACCGGTAGGATCCACTTCAC+GGG 0.605810 4.4:+4781664 None:intergenic
GCTTCCTCAAGATGTGGACA+AGG 0.607803 4.4:-4777697 MS.gene069595:CDS
ACACATACACGCCATCAAGA+TGG 0.610251 4.4:+4779779 None:intergenic
AGAACTCTGGCCACCAACGA+CGG 0.610611 4.4:+4783633 None:intergenic
GCCTGTTGCAGCTGATGCTG+GGG 0.614544 4.4:-4780105 MS.gene069595:intron
TATGGAGTCTGGCTATCTGA+CGG 0.622814 4.4:-4777736 MS.gene069595:CDS
ACAACTCCAGTCTCTTTGCA+AGG 0.623060 4.4:+4776979 None:intergenic
TGCTCTGGAGCAATAAGATG+AGG 0.624218 4.4:+4779534 None:intergenic
CCGTACTTGACAATAAACAA+TGG 0.625270 4.4:+4777267 None:intergenic
CAGGATTTGAAGCAATACCC+TGG 0.628775 4.4:-4777846 MS.gene069595:CDS
GGGCTTACGAAGGTCGCTGT+AGG 0.630278 4.4:-4782771 MS.gene069595:intron
TGTTCACAACACCGATCCAA+GGG 0.632790 4.4:+4780478 None:intergenic
GGTTCGCTCCTACATTGAGA+AGG 0.633877 4.4:-4782596 MS.gene069595:intron
TCTGGCGAAGATGCTCTCAA+AGG 0.634471 4.4:-4780337 MS.gene069595:intron
TCCACTCTAGTTACAATCAG+GGG 0.638669 4.4:-4779489 MS.gene069595:CDS
TGGACTTACATCAACAGCAT+CGG 0.640860 4.4:+4781340 None:intergenic
AACACCTAGCTAACAGAATG+GGG 0.640990 4.4:-4780368 MS.gene069595:CDS
GCAATTATGGAACGTCGTAG+TGG 0.642760 4.4:-4777002 MS.gene069595:CDS
TGTTTATTGTCAAGTACGGG+AGG 0.645558 4.4:-4777263 MS.gene069595:CDS
CCTCAAGATGTGGACAAGGG+TGG 0.645800 4.4:-4777693 MS.gene069595:CDS
GAAGATTGATCTAATGGACA+AGG 0.654022 4.4:-4781366 MS.gene069595:CDS
TTCACCGTGGTCACCTAAGG+CGG 0.656734 4.4:+4783699 None:intergenic
CAACCTCAGCCCGTAAACCA+GGG 0.671483 4.4:+4777829 None:intergenic
TGCACCGCCTTAGGTGACCA+CGG 0.675185 4.4:-4783703 MS.gene069595:CDS
TAATTTGTGTAGCTGCGGTG+AGG 0.676029 4.4:-4783112 MS.gene069595:intron
ATTTCCTACAGGCGACCTGG+AGG 0.691883 4.4:-4779678 MS.gene069595:intron
GACAACACTCTCCAATACGG+AGG 0.703245 4.4:+4783603 None:intergenic
CTTCCTCAAGATGTGGACAA+GGG 0.710629 4.4:-4777696 MS.gene069595:CDS
GAGTGGATTCAATGAGACGA+CGG 0.714501 4.4:+4779505 None:intergenic
AAGATTGATCTAATGGACAA+GGG 0.722186 4.4:-4781365 MS.gene069595:CDS
ATGTTGACATGATTGCTGCA+AGG 0.728270 4.4:-4780431 MS.gene069595:CDS
GGAGTGCACTAGATTCACCG+TGG 0.804143 4.4:+4783686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAAAAAAAATAAT+TGG + chr4.4:4779360-4779379 None:intergenic 0.0%
!! AAAAAAATCTATATATGTTT+CGG + chr4.4:4778352-4778371 None:intergenic 10.0%
!! ACATATTATATATAAGAATA+AGG + chr4.4:4777748-4777767 None:intergenic 10.0%
!! ATAAATAACTAAGAAAAATA+TGG - chr4.4:4778184-4778203 MS.gene069595:intron 10.0%
!! CATATTATATATAAGAATAA+GGG + chr4.4:4777747-4777766 None:intergenic 10.0%
!! TTATATAGATATACATAATT+GGG + chr4.4:4779579-4779598 None:intergenic 10.0%
!!! GTATTTTTTTTTATACAATT+GGG - chr4.4:4777125-4777144 MS.gene069595:intron 10.0%
!!! TATTTTTTTTTATACAATTG+GGG - chr4.4:4777126-4777145 MS.gene069595:intron 10.0%
!! AAAATAAATGGATATTATGT+GGG + chr4.4:4780710-4780729 None:intergenic 15.0%
!! AATAGAAGTAAATATATGAA+TGG + chr4.4:4782191-4782210 None:intergenic 15.0%
!! ATAACATTTGTGTAAAAATT+AGG - chr4.4:4778875-4778894 MS.gene069595:intron 15.0%
!! ATAGAAGTAAATATATGAAT+GGG + chr4.4:4782190-4782209 None:intergenic 15.0%
!! CATGATTAAATTAATACAAT+TGG - chr4.4:4782753-4782772 MS.gene069595:intron 15.0%
!! GTTATATAGATATACATAAT+TGG + chr4.4:4779580-4779599 None:intergenic 15.0%
!! TAAATAAATTGTATAATTGC+TGG - chr4.4:4781673-4781692 MS.gene069595:CDS 15.0%
!! TTTCATATTTATAAGAACTA+AGG - chr4.4:4779949-4779968 MS.gene069595:intron 15.0%
!!! AAATTAGTGATTTTTCTAAT+TGG - chr4.4:4781417-4781436 MS.gene069595:intron 15.0%
!!! AATAAATGAAAAGTATAATC+AGG + chr4.4:4783518-4783537 None:intergenic 15.0%
!!! ACTTCACTTTTTAAATATAT+TGG + chr4.4:4783229-4783248 None:intergenic 15.0%
!!! ATAATACATACAATTTTACA+TGG - chr4.4:4779634-4779653 MS.gene069595:CDS 15.0%
!!! ATAGGAAATAAAATATTTTC+AGG - chr4.4:4778133-4778152 MS.gene069595:intron 15.0%
!!! ATATAGAAACATTTTGAAAA+TGG + chr4.4:4777391-4777410 None:intergenic 15.0%
!!! GGTATTTTTTTTTATACAAT+TGG - chr4.4:4777124-4777143 MS.gene069595:intron 15.0%
!!! TATATTTTGTTACATGATAA+GGG - chr4.4:4782277-4782296 MS.gene069595:intron 15.0%
!!! TTACTTCTATTTTCTATTTA+TGG - chr4.4:4782200-4782219 MS.gene069595:intron 15.0%
!!! TTATATTTTGTTACATGATA+AGG - chr4.4:4782276-4782295 MS.gene069595:intron 15.0%
!!! TTTAAGTTCATCAAAATAAA+TGG + chr4.4:4780722-4780741 None:intergenic 15.0%
!! AAAAGAAAAGTTACCAAAAT+CGG + chr4.4:4777300-4777319 None:intergenic 20.0%
!! AATATATGCTAAGATGAATA+GGG + chr4.4:4777650-4777669 None:intergenic 20.0%
!! ACATAAGTTCTCAAAAAAAT+TGG + chr4.4:4781286-4781305 None:intergenic 20.0%
!! ACATTAAGTAAATAGTTTGA+TGG - chr4.4:4779227-4779246 MS.gene069595:intron 20.0%
!! ATCATTAATTTCAAAAACTG+TGG - chr4.4:4778840-4778859 MS.gene069595:intron 20.0%
!! ATGAACAACTATTACAAAAA+GGG + chr4.4:4782736-4782755 None:intergenic 20.0%
!! ATTATCATTGTTTAGTCAAA+TGG + chr4.4:4782257-4782276 None:intergenic 20.0%
!! ATTCAAATCAGTAAAATCAA+TGG + chr4.4:4777350-4777369 None:intergenic 20.0%
!! CAAAATAAATGGATATTATG+TGG + chr4.4:4780711-4780730 None:intergenic 20.0%
!! CATAAGTTCTCAAAAAAATT+GGG + chr4.4:4781285-4781304 None:intergenic 20.0%
!! GATATAATGATTCTTATCTA+AGG - chr4.4:4783033-4783052 MS.gene069595:CDS 20.0%
!! TAATCTATGCAATTATCATT+CGG + chr4.4:4778392-4778411 None:intergenic 20.0%
!! TATATAATATGTAGATCTGT+CGG - chr4.4:4777756-4777775 MS.gene069595:CDS 20.0%
!! TTATTTAAATATAGGGACTT+GGG + chr4.4:4778453-4778472 None:intergenic 20.0%
!! TTCAAATCAGTAAAATCAAT+GGG + chr4.4:4777349-4777368 None:intergenic 20.0%
!! TTGAAAGCAGAAAATTTATA+GGG + chr4.4:4781914-4781933 None:intergenic 20.0%
!! TTTATTTAAATATAGGGACT+TGG + chr4.4:4778454-4778473 None:intergenic 20.0%
!!! AAATGCAGTTAAATTGTTTT+TGG + chr4.4:4782444-4782463 None:intergenic 20.0%
!!! AATTTTGTCATATGTCAATA+TGG - chr4.4:4783354-4783373 MS.gene069595:intron 20.0%
!!! AATTTTTTTGAGAACTTATG+TGG - chr4.4:4781285-4781304 MS.gene069595:intron 20.0%
!!! CTATAATTTTGTCTATTTGT+GGG + chr4.4:4778238-4778257 None:intergenic 20.0%
!!! GATAAAAGTTATGTTTCTAT+AGG + chr4.4:4778299-4778318 None:intergenic 20.0%
!!! GGGGTTTTTATTTAAATATA+GGG + chr4.4:4778460-4778479 None:intergenic 20.0%
!!! GTTTATTTGTTTCAACTTTT+AGG - chr4.4:4779264-4779283 MS.gene069595:intron 20.0%
!!! TCTATAATTTTGTCTATTTG+TGG + chr4.4:4778239-4778258 None:intergenic 20.0%
!!! TGGGGTTTTTATTTAAATAT+AGG + chr4.4:4778461-4778480 None:intergenic 20.0%
!!! TTATCTTTTTGTAATGCTAT+GGG - chr4.4:4782633-4782652 MS.gene069595:CDS 20.0%
!!! TTATTCAAGTGTTGAATTAT+GGG - chr4.4:4777832-4777851 MS.gene069595:CDS 20.0%
!!! TTGATTTTTATATCAGCATT+TGG - chr4.4:4780458-4780477 MS.gene069595:CDS 20.0%
!!! TTTATTCAAGTGTTGAATTA+TGG - chr4.4:4777831-4777850 MS.gene069595:CDS 20.0%
!!! TTTCAATATTTCCTTTTCTT+TGG - chr4.4:4779038-4779057 MS.gene069595:intron 20.0%
! AAAACAACTGATCATTATCA+GGG + chr4.4:4780077-4780096 None:intergenic 25.0%
! AAATAGCAATGAGAAAAAGA+AGG + chr4.4:4777439-4777458 None:intergenic 25.0%
! AAATTAATACAATTGGAACC+TGG - chr4.4:4782760-4782779 MS.gene069595:intron 25.0%
! AATAGCAATGAGAAAAAGAA+GGG + chr4.4:4777438-4777457 None:intergenic 25.0%
! AATATAATAGCATGCAAACA+TGG - chr4.4:4779377-4779396 MS.gene069595:intron 25.0%
! AATTGAAACCAGAAATTTAG+AGG - chr4.4:4782071-4782090 MS.gene069595:intron 25.0%
! ACATGGAAACATTTCAAAAT+CGG + chr4.4:4777519-4777538 None:intergenic 25.0%
! AGACCTTAAAAAAAGTCATT+TGG + chr4.4:4781979-4781998 None:intergenic 25.0%
! AGCTTTCAATGGAAAATATA+AGG - chr4.4:4781090-4781109 MS.gene069595:intron 25.0%
! AGTGCAAAAAGTTAGAATAA+TGG + chr4.4:4779171-4779190 None:intergenic 25.0%
! ATAATTGATGCGTATTTGTA+GGG - chr4.4:4777177-4777196 MS.gene069595:intron 25.0%
! ATAGCCAAAATTATACAGTT+CGG + chr4.4:4778946-4778965 None:intergenic 25.0%
! ATATATTCAAACGTACCATT+GGG + chr4.4:4777675-4777694 None:intergenic 25.0%
! ATCAATATGACTTTAGTTGT+TGG + chr4.4:4780443-4780462 None:intergenic 25.0%
! ATTTATAAGAACTAAGGAGT+TGG - chr4.4:4779955-4779974 MS.gene069595:intron 25.0%
! CAACATGAAAACACTTAATA+AGG + chr4.4:4780793-4780812 None:intergenic 25.0%
! CAACTTAGTGTTAGAATATT+GGG - chr4.4:4779545-4779564 MS.gene069595:CDS 25.0%
! CATGAACAACTATTACAAAA+AGG + chr4.4:4782737-4782756 None:intergenic 25.0%
! CTATCAAAAATTGAATGAGT+GGG + chr4.4:4783014-4783033 None:intergenic 25.0%
! GAATATATGCTAAGATGAAT+AGG + chr4.4:4777651-4777670 None:intergenic 25.0%
! GATATACATAATTGGGATTA+TGG + chr4.4:4779572-4779591 None:intergenic 25.0%
! GATGAACTTAAATATTGATG+TGG - chr4.4:4780730-4780749 MS.gene069595:intron 25.0%
! GATTTAATCATAAAGATGAG+AGG - chr4.4:4778322-4778341 MS.gene069595:intron 25.0%
! GTTGAAAGCAGAAAATTTAT+AGG + chr4.4:4781915-4781934 None:intergenic 25.0%
! TAAAACAACTGATCATTATC+AGG + chr4.4:4780078-4780097 None:intergenic 25.0%
! TAAATAAGCTCAATTCATAC+TGG + chr4.4:4782303-4782322 None:intergenic 25.0%
! TAGAGAATAAATAAGAATGC+AGG + chr4.4:4779893-4779912 None:intergenic 25.0%
! TATATATTCAAACGTACCAT+TGG + chr4.4:4777676-4777695 None:intergenic 25.0%
! TATCAAAAATTGAATGAGTG+GGG + chr4.4:4783013-4783032 None:intergenic 25.0%
! TATCATCTGTCATTGTTAAA+TGG - chr4.4:4783284-4783303 MS.gene069595:intron 25.0%
! TCAAATCAGTAAAATCAATG+GGG + chr4.4:4777348-4777367 None:intergenic 25.0%
! TCGTTAAATGCATTCAAAAT+GGG + chr4.4:4779076-4779095 None:intergenic 25.0%
! TCTATAGGATGATTATGTAA+AGG + chr4.4:4778284-4778303 None:intergenic 25.0%
! TCTATCAAAAATTGAATGAG+TGG + chr4.4:4783015-4783034 None:intergenic 25.0%
! TGATGTTCATACATAATACA+AGG + chr4.4:4778824-4778843 None:intergenic 25.0%
! TTCGTTAAATGCATTCAAAA+TGG + chr4.4:4779077-4779096 None:intergenic 25.0%
! TTGGAACAGAGAATTTAAAA+TGG + chr4.4:4780620-4780639 None:intergenic 25.0%
! TTTATAAGAACTAAGGAGTT+GGG - chr4.4:4779956-4779975 MS.gene069595:intron 25.0%
!! AAAAGTATAATCAGGAAACT+TGG + chr4.4:4783510-4783529 None:intergenic 25.0%
!! AAAGGAAATATTGAAAGTAC+CGG + chr4.4:4779034-4779053 None:intergenic 25.0%
!! ATTTTTGCATAACTGTAGAT+GGG - chr4.4:4778023-4778042 MS.gene069595:intron 25.0%
!! CAAAAATCAAAGGAGAATTT+TGG - chr4.4:4782096-4782115 MS.gene069595:intron 25.0%
!! CAAGTACTAAAGCTTTTAAT+AGG - chr4.4:4778115-4778134 MS.gene069595:intron 25.0%
!! GCATTTAACGAATCTTTTTA+TGG - chr4.4:4779085-4779104 MS.gene069595:intron 25.0%
!! GTTATCTTTTTGTAATGCTA+TGG - chr4.4:4782632-4782651 MS.gene069595:CDS 25.0%
!! TAATTTACAGCTTTTAGACA+GGG + chr4.4:4781403-4781422 None:intergenic 25.0%
!! TGAACTTTTGTAAAAAAAGC+AGG + chr4.4:4781945-4781964 None:intergenic 25.0%
!! TTATAAATTTTATCACCTCC+AGG + chr4.4:4781017-4781036 None:intergenic 25.0%
!!! ATAAGTTTTATGAGACTGTT+TGG - chr4.4:4782328-4782347 MS.gene069595:intron 25.0%
!!! ATTTTCAGGATCAACTTATA+TGG - chr4.4:4778147-4778166 MS.gene069595:intron 25.0%
!!! CAAAATTCTCCTTTGATTTT+TGG + chr4.4:4782098-4782117 None:intergenic 25.0%
!!! CTGTTTTTTCATTGCATAAA+GGG + chr4.4:4778519-4778538 None:intergenic 25.0%
!!! GTTCCAAATGACTTTTTTTA+AGG - chr4.4:4781973-4781992 MS.gene069595:intron 25.0%
!!! TAAGTTTTATGAGACTGTTT+GGG - chr4.4:4782329-4782348 MS.gene069595:intron 25.0%
!!! TATAATTTTGGCTATTTCAC+CGG - chr4.4:4778951-4778970 MS.gene069595:intron 25.0%
!!! TATTTTTGCATAACTGTAGA+TGG - chr4.4:4778022-4778041 MS.gene069595:intron 25.0%
!!! TCTGTTTTTTCATTGCATAA+AGG + chr4.4:4778520-4778539 None:intergenic 25.0%
!!! TGAACTTGGACTTTTTTTAT+GGG + chr4.4:4778490-4778509 None:intergenic 25.0%
!!! TGTATTATGTGTTTTTGTCT+TGG - chr4.4:4781451-4781470 MS.gene069595:intron 25.0%
!!! TTTGATGGTTTTCTAATCAT+TGG - chr4.4:4779242-4779261 MS.gene069595:intron 25.0%
!!! TTTTGTTGACTAATGAGATT+AGG + chr4.4:4776943-4776962 None:intergenic 25.0%
AAACTTATTACAGAAGCTGA+TGG - chr4.4:4781113-4781132 MS.gene069595:intron 30.0%
AAATGAAATTGAAACCGAAC+TGG - chr4.4:4780536-4780555 MS.gene069595:intron 30.0%
AAGGTCAAAACAATGGAAAA+GGG - chr4.4:4779414-4779433 MS.gene069595:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr4.4:4782543-4782562 MS.gene069595:intron 30.0%
AATGAGAGATGAAAGCAAAA+GGG - chr4.4:4782899-4782918 MS.gene069595:intron 30.0%
AATTAAAATTTCCCGTGAAG+TGG - chr4.4:4779002-4779021 MS.gene069595:intron 30.0%
AATTCTCAAAGCAAATTCAG+AGG + chr4.4:4781838-4781857 None:intergenic 30.0%
ACTCGATAATGAACAGATTT+AGG + chr4.4:4782570-4782589 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr4.4:4782544-4782563 MS.gene069595:intron 30.0%
ATAGCAGCAAGAAATAAAAC+TGG + chr4.4:4781645-4781664 None:intergenic 30.0%
ATATTCAAAGACCATCTTGA+TGG - chr4.4:4780887-4780906 MS.gene069595:intron 30.0%
ATTCTCAAAGCAAATTCAGA+GGG + chr4.4:4781837-4781856 None:intergenic 30.0%
ATTTGGAAACAGCATTTGAA+TGG - chr4.4:4781734-4781753 MS.gene069595:CDS 30.0%
CAAATCAGTAAAATCAATGG+GGG + chr4.4:4777347-4777366 None:intergenic 30.0%
CATAATTGATGCGTATTTGT+AGG - chr4.4:4777176-4777195 MS.gene069595:intron 30.0%
CATTGTTTATTGTCAAGTAC+GGG - chr4.4:4783411-4783430 MS.gene069595:CDS 30.0%
CCATTGTTTATTGTCAAGTA+CGG - chr4.4:4783410-4783429 MS.gene069595:CDS 30.0%
CGTTAAATGCATTCAAAATG+GGG + chr4.4:4779075-4779094 None:intergenic 30.0%
GAAATGTTTCCATGTATGTA+TGG - chr4.4:4777524-4777543 MS.gene069595:intron 30.0%
GAAGGAAATTCAAGATGAAA+CGG - chr4.4:4777587-4777606 MS.gene069595:intron 30.0%
GAGAAATTACTTCCAAACTT+GGG + chr4.4:4778422-4778441 None:intergenic 30.0%
GCAAAGAATGAGTATTTACA+AGG + chr4.4:4779602-4779621 None:intergenic 30.0%
GCAACTTAGTGTTAGAATAT+TGG - chr4.4:4779544-4779563 MS.gene069595:CDS 30.0%
GTAGGAAATTGACACAAATA+AGG + chr4.4:4780988-4781007 None:intergenic 30.0%
GTCATTTGTGTGTGTTTATA+CGG - chr4.4:4780676-4780695 MS.gene069595:intron 30.0%
TATTTGTGTCAATTTCCTAC+AGG - chr4.4:4780988-4781007 MS.gene069595:intron 30.0%
TCATTTGTGTGTGTTTATAC+GGG - chr4.4:4780677-4780696 MS.gene069595:intron 30.0%
TGAGAAATTACTTCCAAACT+TGG + chr4.4:4778423-4778442 None:intergenic 30.0%
TGATGAGTAGAAATTTACAG+AGG - chr4.4:4779771-4779790 MS.gene069595:intron 30.0%
TGTAACTGAAATAGTGATGT+AGG - chr4.4:4782610-4782629 MS.gene069595:CDS 30.0%
TGTAAGATCGTTTGAATTGT+AGG - chr4.4:4778209-4778228 MS.gene069595:intron 30.0%
TGTGCATGATATTGAGAATA+TGG - chr4.4:4778060-4778079 MS.gene069595:intron 30.0%
TTAATAAGGATCCCTGAAAA+TGG + chr4.4:4780779-4780798 None:intergenic 30.0%
TTAGCTAGGTGTTTATATTC+AGG + chr4.4:4780302-4780321 None:intergenic 30.0%
TTCTAGTGACAATGTTCATT+TGG - chr4.4:4781717-4781736 MS.gene069595:CDS 30.0%
TTGTTACAAGGTCAAAACAA+TGG - chr4.4:4779407-4779426 MS.gene069595:intron 30.0%
TTTAGAGGACCAAAAATCAA+AGG - chr4.4:4782086-4782105 MS.gene069595:intron 30.0%
TTTGACGAAGATTGATCTAA+TGG - chr4.4:4779305-4779324 MS.gene069595:intron 30.0%
! AAATCAAAGGAGAATTTTGG+AGG - chr4.4:4782099-4782118 MS.gene069595:intron 30.0%
! AAGATTGATCTAATGGACAA+GGG - chr4.4:4779312-4779331 MS.gene069595:intron 30.0%
! AATATGACACTCCATTTTCA+GGG - chr4.4:4780765-4780784 MS.gene069595:intron 30.0%
! AATATTGATGTGGTGATGAT+TGG - chr4.4:4780740-4780759 MS.gene069595:intron 30.0%
! AATCAAAGGAGAATTTTGGA+GGG - chr4.4:4782100-4782119 MS.gene069595:intron 30.0%
! CGTGAACTTTTGTAAAAAAC+AGG - chr4.4:4782042-4782061 MS.gene069595:intron 30.0%
! CTAATTTACAGCTTTTAGAC+AGG + chr4.4:4781404-4781423 None:intergenic 30.0%
! GCAAGATAAACTTTCTAGAA+TGG + chr4.4:4778768-4778787 None:intergenic 30.0%
! GCAAGCAAAAGTATATATCA+TGG + chr4.4:4780143-4780162 None:intergenic 30.0%
! GCATCATTTGCTGAAATATT+AGG - chr4.4:4780383-4780402 MS.gene069595:CDS 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr4.4:4783266-4783247 None:intergenic 30.0%
! TAATATGACACTCCATTTTC+AGG - chr4.4:4780764-4780783 MS.gene069595:intron 30.0%
! TAATCTTTTGCTGATCTCTT+TGG - chr4.4:4781498-4781517 MS.gene069595:intron 30.0%
! TGACAATAAACAATGGACTT+CGG + chr4.4:4783406-4783425 None:intergenic 30.0%
! TGAGATAAAGGGTTTTCTTT+CGG - chr4.4:4781869-4781888 MS.gene069595:intron 30.0%
! TTTTGCTTATAATAGTGACC+CGG - chr4.4:4783248-4783267 MS.gene069595:intron 30.0%
!! AAGTTTTATGAGACTGTTTG+GGG - chr4.4:4782330-4782349 MS.gene069595:intron 30.0%
!! CATGGTTATAGTTTGTTACA+AGG - chr4.4:4779395-4779414 MS.gene069595:intron 30.0%
!! CTAGAAGTGTTTGAGATAAA+GGG - chr4.4:4781858-4781877 MS.gene069595:intron 30.0%
!! GTTGTTTTCAAAAGCTATCT+TGG + chr4.4:4782410-4782429 None:intergenic 30.0%
!! TCTAGAAGTGTTTGAGATAA+AGG - chr4.4:4781857-4781876 MS.gene069595:intron 30.0%
!! TGAAAGTTGGTATACTTAGA+GGG - chr4.4:4782131-4782150 MS.gene069595:intron 30.0%
!! TGTTTTGAATTGATTCTTCC+AGG - chr4.4:4781539-4781558 MS.gene069595:intron 30.0%
!! TTTTTGGTCCTCTAAATTTC+TGG + chr4.4:4782082-4782101 None:intergenic 30.0%
!!! CTGAACTTGGACTTTTTTTA+TGG + chr4.4:4778491-4778510 None:intergenic 30.0%
!!! CTTTTTGCACTGTTGATTTT+TGG - chr4.4:4779180-4779199 MS.gene069595:intron 30.0%
AAAAAAATACCTGATCCACG+AGG + chr4.4:4777115-4777134 None:intergenic 35.0%
AAACAAAACCCAGGTTGTAA+AGG - chr4.4:4778557-4778576 MS.gene069595:intron 35.0%
AAACACCTAGCTAACAGAAT+GGG - chr4.4:4780308-4780327 MS.gene069595:intron 35.0%
AAAGCAGTCTCAAACTTGAA+CGG - chr4.4:4783076-4783095 MS.gene069595:CDS 35.0%
AACGCTAAAAGCCAAAGAAA+AGG + chr4.4:4779052-4779071 None:intergenic 35.0%
AACTGCATCTATTTCAGCTT+GGG + chr4.4:4783733-4783752 None:intergenic 35.0%
AATCCACTCTAGTTACAATC+AGG - chr4.4:4781186-4781205 MS.gene069595:intron 35.0%
AATCTTCGTCAAAACTCCAA+TGG + chr4.4:4779298-4779317 None:intergenic 35.0%
AATGCAGGTCAATTGAAATC+AGG + chr4.4:4779878-4779897 None:intergenic 35.0%
AATGTAAAATGAGAAGTCCC+AGG + chr4.4:4781622-4781641 None:intergenic 35.0%
ACAAATGACAAAAGTCTGGA+GGG + chr4.4:4780665-4780684 None:intergenic 35.0%
ACACACAAATGACAAAAGTC+TGG + chr4.4:4780669-4780688 None:intergenic 35.0%
AGAGGAAAATCGTTGAATCA+TGG + chr4.4:4778645-4778664 None:intergenic 35.0%
AGGAAAATCGTTGAATCATG+GGG + chr4.4:4778643-4778662 None:intergenic 35.0%
AGGTCAAAACAATGGAAAAG+GGG - chr4.4:4779415-4779434 MS.gene069595:intron 35.0%
ATATCATGCACAATACTCTC+AGG + chr4.4:4778052-4778071 None:intergenic 35.0%
ATCCACTCTAGTTACAATCA+GGG - chr4.4:4781187-4781206 MS.gene069595:intron 35.0%
ATGAAAATCGTTGAAGAGAC+CGG + chr4.4:4778682-4778701 None:intergenic 35.0%
ATGATATACTATACTCCCTC+CGG + chr4.4:4783270-4783289 None:intergenic 35.0%
ATTCTCTGTTCCAAAACCAT+TGG - chr4.4:4780626-4780645 MS.gene069595:intron 35.0%
ATTGCCAGTAAATGAAAACC+AGG + chr4.4:4782781-4782800 None:intergenic 35.0%
CAAGGTCAAAACAATGGAAA+AGG - chr4.4:4779413-4779432 MS.gene069595:intron 35.0%
CAGATAAGCTCATTAGTCAT+AGG + chr4.4:4779736-4779755 None:intergenic 35.0%
CAGTGAAAAAGTGATCAAGT+AGG + chr4.4:4783450-4783469 None:intergenic 35.0%
CATATAGGTTAAAGTTCCCT+TGG - chr4.4:4780183-4780202 MS.gene069595:CDS 35.0%
CATGTATGTATGGATGGTAA+TGG - chr4.4:4777534-4777553 MS.gene069595:intron 35.0%
CATTACCATCCATACATACA+TGG + chr4.4:4777536-4777555 None:intergenic 35.0%
CCGTACTTGACAATAAACAA+TGG + chr4.4:4783413-4783432 None:intergenic 35.0%
CTATGACTAATGAGCTTATC+TGG - chr4.4:4779734-4779753 MS.gene069595:intron 35.0%
CTTAGCATATATTCTCCCAA+TGG - chr4.4:4777657-4777676 MS.gene069595:CDS 35.0%
GAACATTACCTTCTCAATGT+AGG + chr4.4:4778092-4778111 None:intergenic 35.0%
GAATGAGAGATGAAAGCAAA+AGG - chr4.4:4782898-4782917 MS.gene069595:intron 35.0%
GAGGAAAATCGTTGAATCAT+GGG + chr4.4:4778644-4778663 None:intergenic 35.0%
GATTAAGAAGTTCCCAAGTT+TGG - chr4.4:4778407-4778426 MS.gene069595:intron 35.0%
GTTGCAATATCTTGATTAGC+CGG + chr4.4:4778973-4778992 None:intergenic 35.0%
TAAACACCTAGCTAACAGAA+TGG - chr4.4:4780307-4780326 MS.gene069595:intron 35.0%
TAAGGTTGGGTATCATTCTA+TGG - chr4.4:4779701-4779720 MS.gene069595:intron 35.0%
TATAATCAGGAAACTTGGAG+AGG + chr4.4:4783505-4783524 None:intergenic 35.0%
TATTTGTAGGGATCGTTACT+CGG - chr4.4:4777189-4777208 MS.gene069595:intron 35.0%
TCATAGTTTAATACTCCCTC+CGG - chr4.4:4783116-4783135 MS.gene069595:intron 35.0%
TCTATGCAATTATCATTCGG+TGG + chr4.4:4778389-4778408 None:intergenic 35.0%
TGAGTTGTTTGGGTCAAAAA+CGG - chr4.4:4778582-4778601 MS.gene069595:intron 35.0%
TGTCATCAAAAAAAGTCGCT+TGG - chr4.4:4782010-4782029 MS.gene069595:intron 35.0%
TGTTTCCATGTATGTATGGA+TGG - chr4.4:4777528-4777547 MS.gene069595:intron 35.0%
TTTCACTGAGCTAGGAAAAA+TGG - chr4.4:4783462-4783481 MS.gene069595:CDS 35.0%
TTTGAGAACTTATGTGGTAG+TGG - chr4.4:4781291-4781310 MS.gene069595:intron 35.0%
TTTGTCCTCATTACTGAATG+AGG - chr4.4:4783647-4783666 MS.gene069595:CDS 35.0%
! AAATCGGTGAATCTTTTCCT+CGG + chr4.4:4777284-4777303 None:intergenic 35.0%
! AGGGACAGTTGAAATTTGTT+TGG + chr4.4:4777631-4777650 None:intergenic 35.0%
! ATCTGACGGTTGATTTCTTT+CGG - chr4.4:4782955-4782974 MS.gene069595:intron 35.0%
! GAAGATTGATCTAATGGACA+AGG - chr4.4:4779311-4779330 MS.gene069595:intron 35.0%
! GAGATAAAGGGTTTTCTTTC+GGG - chr4.4:4781870-4781889 MS.gene069595:intron 35.0%
! GATTCTTATCTAAGGCGAAT+CGG - chr4.4:4783041-4783060 MS.gene069595:CDS 35.0%
! GGCAATTTTCTCATCAATAC+TGG - chr4.4:4782795-4782814 MS.gene069595:CDS 35.0%
! TCTTCAACGATTTTCATGGT+TGG - chr4.4:4778685-4778704 MS.gene069595:intron 35.0%
! TGAAATTTGTTTGGATCGAC+CGG + chr4.4:4777622-4777641 None:intergenic 35.0%
! TGTAAAGGTGTGAGTTGTTT+GGG - chr4.4:4778572-4778591 MS.gene069595:intron 35.0%
! TTGTAAAGGTGTGAGTTGTT+TGG - chr4.4:4778571-4778590 MS.gene069595:intron 35.0%
! TTTTGTAATGCTATGGGCAT+TGG - chr4.4:4782639-4782658 MS.gene069595:CDS 35.0%
!! AATGGACTTTTCACAAGTAC+AGG + chr4.4:4782239-4782258 None:intergenic 35.0%
!! AGTTTTATGAGACTGTTTGG+GGG - chr4.4:4782331-4782350 MS.gene069595:intron 35.0%
!! CTGAAAGTTGGTATACTTAG+AGG - chr4.4:4782130-4782149 MS.gene069595:intron 35.0%
!! GAAAGTTGGTATACTTAGAG+GGG - chr4.4:4782132-4782151 MS.gene069595:intron 35.0%
!! GAAATATTGAAAGTACCGGT+AGG + chr4.4:4779030-4779049 None:intergenic 35.0%
!! TACTGGCTTTGTTTATTCTC+AGG - chr4.4:4782812-4782831 MS.gene069595:intron 35.0%
!! TGGTTTAATTTGTGTAGCTG+CGG - chr4.4:4777560-4777579 MS.gene069595:intron 35.0%
!!! AGGAAAAGATTCACCGATTT+TGG - chr4.4:4777284-4777303 MS.gene069595:CDS 35.0%
!!! TGGACTTTTTTTATGGGACT+CGG + chr4.4:4778484-4778503 None:intergenic 35.0%
AAACTTGAACGGACGGTATA+TGG - chr4.4:4783087-4783106 MS.gene069595:CDS 40.0%
AACACCTAGCTAACAGAATG+GGG - chr4.4:4780309-4780328 MS.gene069595:intron 40.0%
AACACTACAACTGGTCGATA+TGG - chr4.4:4782923-4782942 MS.gene069595:intron 40.0%
AACTCACACCTTTACAACCT+GGG + chr4.4:4778568-4778587 None:intergenic 40.0%
ACAACTGCAAGAGTCACAAA+AGG + chr4.4:4777861-4777880 None:intergenic 40.0%
ACATTGTCACTAGAATTCCC+CGG + chr4.4:4781712-4781731 None:intergenic 40.0%
AGCCTTCCATATTGAGGATA+TGG - chr4.4:4779851-4779870 MS.gene069595:intron 40.0%
AGGATCCTCATTCAGTAATG+AGG + chr4.4:4783655-4783674 None:intergenic 40.0%
AGGGTTATGCTATAAACTCG+AGG + chr4.4:4780058-4780077 None:intergenic 40.0%
AGGTTAAAGTTCCCTTGGAT+CGG - chr4.4:4780188-4780207 MS.gene069595:CDS 40.0%
ATAAAGGGATGCACTGAACT+TGG + chr4.4:4778504-4778523 None:intergenic 40.0%
ATGTTGACATGATTGCTGCA+AGG - chr4.4:4780246-4780265 MS.gene069595:intron 40.0%
CAAAAACTGTGGCAAGTTCT+AGG - chr4.4:4778851-4778870 MS.gene069595:intron 40.0%
CAACTGCATCTATTTCAGCT+TGG + chr4.4:4783734-4783753 None:intergenic 40.0%
CACAAATGACAAAAGTCTGG+AGG + chr4.4:4780666-4780685 None:intergenic 40.0%
CCAGGTTCATTCGCTATTAA+AGG - chr4.4:4781557-4781576 MS.gene069595:intron 40.0%
CCTTTAATAGCGAATGAACC+TGG + chr4.4:4781560-4781579 None:intergenic 40.0%
CGAGTCAAAAAACAAAACCC+AGG - chr4.4:4778548-4778567 MS.gene069595:intron 40.0%
CTAATTAGAGACTGAATGCC+TGG + chr4.4:4780507-4780526 None:intergenic 40.0%
CTGAAATAGATGCAGTTGCT+TGG - chr4.4:4783736-4783755 MS.gene069595:CDS 40.0%
GAAGAGAATCCCAAAGAGTA+GGG + chr4.4:4777015-4777034 None:intergenic 40.0%
GAATGAGGATCCTGCAATTA+TGG - chr4.4:4783662-4783681 MS.gene069595:CDS 40.0%
GAGAACAAGCTGACTGAATT+GGG - chr4.4:4779202-4779221 MS.gene069595:intron 40.0%
GATGAAACGGATAGAGAAAC+CGG - chr4.4:4777600-4777619 MS.gene069595:intron 40.0%
GCCTTCCATATTGAGGATAT+GGG - chr4.4:4779852-4779871 MS.gene069595:intron 40.0%
GGGCAAGTTATATGCAATCA+TGG - chr4.4:4780841-4780860 MS.gene069595:intron 40.0%
GGGTTATGCTATAAACTCGA+GGG + chr4.4:4780057-4780076 None:intergenic 40.0%
GGTTATGCTATAAACTCGAG+GGG + chr4.4:4780056-4780075 None:intergenic 40.0%
GTAATCAAGTCCAAGATTCC+AGG - chr4.4:4780486-4780505 MS.gene069595:CDS 40.0%
GTTATGCTATAAACTCGAGG+GGG + chr4.4:4780055-4780074 None:intergenic 40.0%
GTTGAAATGTGCAGAGCTTT+CGG - chr4.4:4781771-4781790 MS.gene069595:intron 40.0%
GTTGAGTTAGTGCTAAGGTT+GGG - chr4.4:4779688-4779707 MS.gene069595:intron 40.0%
GTTTGACAAGCAGCTTTCAA+TGG - chr4.4:4781079-4781098 MS.gene069595:intron 40.0%
TCATTCGCTATTAAAGGACC+TGG - chr4.4:4781563-4781582 MS.gene069595:intron 40.0%
TCCACTCTAGTTACAATCAG+GGG - chr4.4:4781188-4781207 MS.gene069595:intron 40.0%
TGAAGCAATACCCTGGTTTA+CGG - chr4.4:4782838-4782857 MS.gene069595:intron 40.0%
TGACATGTCTTTCCTGTACA+CGG - chr4.4:4777941-4777960 MS.gene069595:intron 40.0%
TGATATACTATACTCCCTCC+GGG + chr4.4:4783269-4783288 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4.4:4783134-4783153 None:intergenic 40.0%
TGGACTTACATCAACAGCAT+CGG + chr4.4:4779340-4779359 None:intergenic 40.0%
TGGGTATCATTCTATGGCAT+TGG - chr4.4:4779707-4779726 MS.gene069595:intron 40.0%
TGTTTATTGTCAAGTACGGG+AGG - chr4.4:4783414-4783433 MS.gene069595:CDS 40.0%
TTGAAATGTGCAGAGCTTTC+GGG - chr4.4:4781772-4781791 MS.gene069595:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4.4:4783135-4783154 None:intergenic 40.0%
TTGTGAAGCTGCAAAACAAG+TGG + chr4.4:4777218-4777237 None:intergenic 40.0%
! ACTTTTGCTTGCTCAGATGT+TGG - chr4.4:4780151-4780170 MS.gene069595:CDS 40.0%
! ATAGCCTTAAAACCGTGTAC+AGG + chr4.4:4777956-4777975 None:intergenic 40.0%
! CAACGATTTTCATGGTTGGA+GGG - chr4.4:4778689-4778708 MS.gene069595:intron 40.0%
! CTTTCCTGTACACGGTTTTA+AGG - chr4.4:4777949-4777968 MS.gene069595:intron 40.0%
! CTTTTAGGCGAAAGAACCAT+TGG - chr4.4:4779279-4779298 MS.gene069595:intron 40.0%
! GACAAGGTAACCAATGGTTT+TGG + chr4.4:4780639-4780658 None:intergenic 40.0%
! GCAGCCGAACTGTATAATTT+TGG - chr4.4:4778939-4778958 MS.gene069595:intron 40.0%
! GGTCTCTTCAACGATTTTCA+TGG - chr4.4:4778681-4778700 MS.gene069595:intron 40.0%
! GGTCTGCAAAGAGTATATAC+AGG + chr4.4:4783622-4783641 None:intergenic 40.0%
! TCAACGATTTTCATGGTTGG+AGG - chr4.4:4778688-4778707 MS.gene069595:intron 40.0%
! TGCAATTATCATTCGGTGGT+AGG + chr4.4:4778385-4778404 None:intergenic 40.0%
! TTCTGGAAAATCCTCCGTAT+TGG - chr4.4:4777063-4777082 MS.gene069595:intron 40.0%
!! ACTGTTAGCCTTCCATATTG+AGG - chr4.4:4779845-4779864 MS.gene069595:intron 40.0%
!! AGCAAGGATTAATCGGTTTG+AGG + chr4.4:4780030-4780049 None:intergenic 40.0%
!! AGCATACTGCTTTTCGTACA+TGG + chr4.4:4778902-4778921 None:intergenic 40.0%
!! AGTACAGAAGCATCATCTTG+TGG - chr4.4:4777791-4777810 MS.gene069595:CDS 40.0%
!! GCATACTGCTTTTCGTACAT+GGG + chr4.4:4778901-4778920 None:intergenic 40.0%
!! GGAACCTGGTTTTCATTTAC+TGG - chr4.4:4782774-4782793 MS.gene069595:CDS 40.0%
!! TGTATGGATGGTAATGGTGA+TGG - chr4.4:4777540-4777559 MS.gene069595:intron 40.0%
!! TTAGACAGGGTTGATGTTTG+AGG + chr4.4:4781390-4781409 None:intergenic 40.0%
!!! ACTTTTTTTATGGGACTCGG+TGG + chr4.4:4778481-4778500 None:intergenic 40.0%
!!! CTTTTTTTATGGGACTCGGT+GGG + chr4.4:4778480-4778499 None:intergenic 40.0%
!!! GATCACTTTTTCACTGAGCT+AGG - chr4.4:4783454-4783473 MS.gene069595:CDS 40.0%
!!! TTTTTTTATGGGACTCGGTG+GGG + chr4.4:4778479-4778498 None:intergenic 40.0%
AAAGTCTGGAGGGAAAGACA+AGG + chr4.4:4780655-4780674 None:intergenic 45.0%
ACAACTCCAGTCTCTTTGCA+AGG + chr4.4:4783701-4783720 None:intergenic 45.0%
ACACATACACGCCATCAAGA+TGG + chr4.4:4780901-4780920 None:intergenic 45.0%
AGACTGAATGCCTGGAATCT+TGG + chr4.4:4780499-4780518 None:intergenic 45.0%
AGACTGTTTGGGGGAACATA+TGG - chr4.4:4782340-4782359 MS.gene069595:intron 45.0%
CAAAAGGGCAACACTACAAC+TGG - chr4.4:4782914-4782933 MS.gene069595:intron 45.0%
CAAAGCTGTTAGTGAGACTC+TGG - chr4.4:4781590-4781609 MS.gene069595:intron 45.0%
CAACTCACACCTTTACAACC+TGG + chr4.4:4778569-4778588 None:intergenic 45.0%
CAATCTCACTCTGCGTATTC+AGG - chr4.4:4783325-4783344 MS.gene069595:intron 45.0%
CACTGAGCTAGGAAAAATGG+AGG - chr4.4:4783465-4783484 MS.gene069595:CDS 45.0%
CAGCTTCACAAGAGTGATGA+GGG - chr4.4:4777227-4777246 MS.gene069595:CDS 45.0%
CAGTAATGAGGACAAACGCT+TGG + chr4.4:4783643-4783662 None:intergenic 45.0%
CAGTCTCAAACTTGAACGGA+CGG - chr4.4:4783080-4783099 MS.gene069595:CDS 45.0%
CATCTTATTGCTCCAGAGCA+AGG - chr4.4:4781146-4781165 MS.gene069595:intron 45.0%
CCTTAGCACTAACTCAACCA+AGG + chr4.4:4779686-4779705 None:intergenic 45.0%
CCTTGGTTGAGTTAGTGCTA+AGG - chr4.4:4779683-4779702 MS.gene069595:intron 45.0%
CTACGACGTTCCATAATTGC+AGG + chr4.4:4783675-4783694 None:intergenic 45.0%
CTATTTCAGCTTGGGCACTT+CGG + chr4.4:4783725-4783744 None:intergenic 45.0%
CTGGAGCAATAAGATGAGGT+TGG + chr4.4:4781142-4781161 None:intergenic 45.0%
CTTCCTCAAGATGTGGACAA+GGG - chr4.4:4782981-4783000 MS.gene069595:intron 45.0%
GAACAGATTTAGGCCCTGTT+TGG + chr4.4:4782560-4782579 None:intergenic 45.0%
GAAGCAATACCCTGGTTTAC+GGG - chr4.4:4782839-4782858 MS.gene069595:intron 45.0%
GAGGGACGAAAACTGAAAGT+TGG - chr4.4:4782118-4782137 MS.gene069595:intron 45.0%
GATTTCTTACCTCGTGGATC+AGG - chr4.4:4777103-4777122 MS.gene069595:intron 45.0%
GCAATTATGGAACGTCGTAG+TGG - chr4.4:4783675-4783694 MS.gene069595:CDS 45.0%
GCCCATATCCTCAATATGGA+AGG + chr4.4:4779856-4779875 None:intergenic 45.0%
GCTTATAATAGTGACCCGGA+GGG - chr4.4:4783252-4783271 MS.gene069595:intron 45.0%
GGAAGAGAATCCCAAAGAGT+AGG + chr4.4:4777016-4777035 None:intergenic 45.0%
GGAGAACAAGCTGACTGAAT+TGG - chr4.4:4779201-4779220 MS.gene069595:intron 45.0%
GGCAAAGATTTCTTACCTCG+TGG - chr4.4:4777097-4777116 MS.gene069595:intron 45.0%
GGGAAAGACAAGGTAACCAA+TGG + chr4.4:4780645-4780664 None:intergenic 45.0%
GGTCAAAAACGGTTCACCAT+GGG - chr4.4:4778593-4778612 MS.gene069595:intron 45.0%
GGTTGAGTTAGTGCTAAGGT+TGG - chr4.4:4779687-4779706 MS.gene069595:intron 45.0%
TAGTGCACTCCCTACTCTTT+GGG - chr4.4:4777003-4777022 MS.gene069595:CDS 45.0%
TATGGAGTCTGGCTATCTGA+CGG - chr4.4:4782941-4782960 MS.gene069595:intron 45.0%
TCAGGCCCATATCCTCAATA+TGG + chr4.4:4779860-4779879 None:intergenic 45.0%
TGACACTCATCGATCTTCCT+GGG - chr4.4:4777886-4777905 MS.gene069595:intron 45.0%
TGCTTATAATAGTGACCCGG+AGG - chr4.4:4783251-4783270 MS.gene069595:intron 45.0%
TGCTTGCTCAGATGTTGGAA+GGG - chr4.4:4780156-4780175 MS.gene069595:CDS 45.0%
TGTTCACAACACCGATCCAA+GGG + chr4.4:4780202-4780221 None:intergenic 45.0%
TTCTTGCAGTTCTTCTGCAC+AGG - chr4.4:4782702-4782721 MS.gene069595:intron 45.0%
TTGACACTCATCGATCTTCC+TGG - chr4.4:4777885-4777904 MS.gene069595:intron 45.0%
TTGCTTGCTCAGATGTTGGA+AGG - chr4.4:4780155-4780174 MS.gene069595:CDS 45.0%
! ATAACTTGCCCTGCATGTGA+TGG + chr4.4:4780832-4780851 None:intergenic 45.0%
! CACTAACAGCTTTGTGAACC+AGG + chr4.4:4781584-4781603 None:intergenic 45.0%
! CAGGATTTGAAGCAATACCC+TGG - chr4.4:4782831-4782850 MS.gene069595:intron 45.0%
! GAGTGGATTCAATGAGACGA+CGG + chr4.4:4781175-4781194 None:intergenic 45.0%
! TAATTTGTGTAGCTGCGGTG+AGG - chr4.4:4777565-4777584 MS.gene069595:intron 45.0%
! TGTTGGAAGGGAGAGCATAT+AGG - chr4.4:4780168-4780187 MS.gene069595:CDS 45.0%
!! GAGAACTTATGTGGTAGTGG+TGG - chr4.4:4781294-4781313 MS.gene069595:intron 45.0%
!! TCCGTATTGGAGAGTGTTGT+CGG - chr4.4:4777076-4777095 MS.gene069595:intron 45.0%
!! TCTCTAGTGTTGGTTTCCCA+TGG + chr4.4:4778612-4778631 None:intergenic 45.0%
!! TGAGACTCTGGTTTGTTCCT+GGG - chr4.4:4781602-4781621 MS.gene069595:intron 45.0%
!! TGCTCTGGAGCAATAAGATG+AGG + chr4.4:4781146-4781165 None:intergenic 45.0%
!!! TGGGCATTGGCAATGACTTT+TGG - chr4.4:4782652-4782671 MS.gene069595:intron 45.0%
AATCGTTGAAGAGACCGGAG+TGG + chr4.4:4778677-4778696 None:intergenic 50.0%
ACTGCTTTGCCATCACATGC+AGG - chr4.4:4780820-4780839 MS.gene069595:intron 50.0%
AGATTCACCGTGGTCACCTA+AGG + chr4.4:4776984-4777003 None:intergenic 50.0%
CAACTGGTCGATATGGAGTC+TGG - chr4.4:4782930-4782949 MS.gene069595:intron 50.0%
CAGACCCCATTCTGTTAGCT+AGG + chr4.4:4780316-4780335 None:intergenic 50.0%
CTAGTGCACTCCCTACTCTT+TGG - chr4.4:4777002-4777021 MS.gene069595:CDS 50.0%
CTGAGTTTCTTCACCTTCCG+AGG - chr4.4:4777264-4777283 MS.gene069595:CDS 50.0%
CTGCTTTGCCATCACATGCA+GGG - chr4.4:4780821-4780840 MS.gene069595:intron 50.0%
CTGTTCACAACACCGATCCA+AGG + chr4.4:4780203-4780222 None:intergenic 50.0%
CTTTCCCAAACGAGCCAGTT+CGG + chr4.4:4780553-4780572 None:intergenic 50.0%
GACAACACTCTCCAATACGG+AGG + chr4.4:4777077-4777096 None:intergenic 50.0%
GCAATGAAACAGCAGACCAG+AGG + chr4.4:4782678-4782697 None:intergenic 50.0%
GCAGCTTCACAAGAGTGATG+AGG - chr4.4:4777226-4777245 MS.gene069595:CDS 50.0%
GCCCCTGATTGTAACTAGAG+TGG + chr4.4:4781192-4781211 None:intergenic 50.0%
GCCGACAACACTCTCCAATA+CGG + chr4.4:4777080-4777099 None:intergenic 50.0%
GCTTCCTCAAGATGTGGACA+AGG - chr4.4:4782980-4782999 MS.gene069595:intron 50.0%
GGGGGTGAGCAAGGATTAAT+CGG + chr4.4:4780037-4780056 None:intergenic 50.0%
GGGTCAAAAACGGTTCACCA+TGG - chr4.4:4778592-4778611 MS.gene069595:intron 50.0%
GGTTCGCTCCTACATTGAGA+AGG - chr4.4:4778081-4778100 MS.gene069595:intron 50.0%
TACCGGTAGGATCCACTTCA+CGG + chr4.4:4779017-4779036 None:intergenic 50.0%
TCAATTTCCTACAGGCGACC+TGG - chr4.4:4780996-4781015 MS.gene069595:intron 50.0%
TCGGAAGCTTCCTCAAGATG+TGG - chr4.4:4782974-4782993 MS.gene069595:intron 50.0%
TCTGGCGAAGATGCTCTCAA+AGG - chr4.4:4780340-4780359 MS.gene069595:CDS 50.0%
! AACCAAGGAGCCTGACTTGA+TGG + chr4.4:4779671-4779690 None:intergenic 50.0%
! CGGAGGATTTTCCAGAACTC+TGG + chr4.4:4777060-4777079 None:intergenic 50.0%
! CGGTGAATCTTTTCCTCGGA+AGG + chr4.4:4777280-4777299 None:intergenic 50.0%
! GCAACCTTTTCAGAGCAGCA+GGG + chr4.4:4781058-4781077 None:intergenic 50.0%
! GGCAGCGTTTTCTCTAGTGT+TGG + chr4.4:4778622-4778641 None:intergenic 50.0%
! TAGTGGCCTTGCAAAGAGAC+TGG - chr4.4:4783692-4783711 MS.gene069595:CDS 50.0%
! TGCAACCTTTTCAGAGCAGC+AGG + chr4.4:4781059-4781078 None:intergenic 50.0%
! TGCTGGTGCTCTTATTTCGC+CGG - chr4.4:4781690-4781709 MS.gene069595:CDS 50.0%
! TGGCAATGACTTTTGGCCTC+TGG - chr4.4:4782659-4782678 MS.gene069595:intron 50.0%
!! GAAACCGAACTGGCTCGTTT+GGG - chr4.4:4780546-4780565 MS.gene069595:intron 50.0%
!! GTGAGACTCTGGTTTGTTCC+TGG - chr4.4:4781601-4781620 MS.gene069595:intron 50.0%
!! TGAAACCGAACTGGCTCGTT+TGG - chr4.4:4780545-4780564 MS.gene069595:intron 50.0%
AAGCCTGTTGCAGCTGATGC+TGG - chr4.4:4780570-4780589 MS.gene069595:intron 55.0%
ACCGGTAGGATCCACTTCAC+GGG + chr4.4:4779016-4779035 None:intergenic 55.0%
AGAACTCTGGCCACCAACGA+CGG + chr4.4:4777047-4777066 None:intergenic 55.0%
AGACGACGGTATCCTTGCTC+TGG + chr4.4:4781161-4781180 None:intergenic 55.0%
AGCCTGTTGCAGCTGATGCT+GGG - chr4.4:4780571-4780590 MS.gene069595:intron 55.0%
ATTTCCTACAGGCGACCTGG+AGG - chr4.4:4780999-4781018 MS.gene069595:intron 55.0%
CAAAGAGCTTGCACCGCCTT+AGG - chr4.4:4776965-4776984 MS.gene069595:CDS 55.0%
CAACCTCAGCCCGTAAACCA+GGG + chr4.4:4782851-4782870 None:intergenic 55.0%
CAGAATGGGGTCTGAGCATC+TGG - chr4.4:4780322-4780341 MS.gene069595:intron 55.0%
CCACCCTTGTCCACATCTTG+AGG + chr4.4:4782987-4783006 None:intergenic 55.0%
CCTCAAGATGTGGACAAGGG+TGG - chr4.4:4782984-4783003 MS.gene069595:intron 55.0%
CGATCTTCCTGGGCTTACGA+AGG - chr4.4:4777896-4777915 MS.gene069595:intron 55.0%
CTAAGGCGGTGCAAGCTCTT+TGG + chr4.4:4776967-4776986 None:intergenic 55.0%
CTCCATCAAGTCAGGCTCCT+TGG - chr4.4:4779666-4779685 MS.gene069595:CDS 55.0%
GGAGTGCACTAGATTCACCG+TGG + chr4.4:4776994-4777013 None:intergenic 55.0%
TAAACTCGAGGGGGTGAGCA+AGG + chr4.4:4780046-4780065 None:intergenic 55.0%
TCATCCGCCTCCATCAAGTC+AGG - chr4.4:4779658-4779677 MS.gene069595:CDS 55.0%
TCCCGTGAAGTGGATCCTAC+CGG - chr4.4:4779012-4779031 MS.gene069595:intron 55.0%
TTCACCGTGGTCACCTAAGG+CGG + chr4.4:4776981-4777000 None:intergenic 55.0%
TTGTGTAGCTGCGGTGAGGA+AGG - chr4.4:4777569-4777588 MS.gene069595:intron 55.0%
! ATACCCTGGTTTACGGGCTG+AGG - chr4.4:4782845-4782864 MS.gene069595:intron 55.0%
! CAAGGAGCCTGACTTGATGG+AGG + chr4.4:4779668-4779687 None:intergenic 55.0%
! CTGGTGCTCTTATTTCGCCG+GGG - chr4.4:4781692-4781711 MS.gene069595:CDS 55.0%
! CTGGTTTACGGGCTGAGGTT+GGG - chr4.4:4782850-4782869 MS.gene069595:intron 55.0%
! GCTGGTGCTCTTATTTCGCC+GGG - chr4.4:4781691-4781710 MS.gene069595:CDS 55.0%
! TGGTTTACGGGCTGAGGTTG+GGG - chr4.4:4782851-4782870 MS.gene069595:intron 55.0%
! TTTTCAGAGCAGCAGGGAGC+TGG + chr4.4:4781052-4781071 None:intergenic 55.0%
!! AGCTCCCTGCTGCTCTGAAA+AGG - chr4.4:4781051-4781070 MS.gene069595:intron 55.0%
ACAGCGACCTTCGTAAGCCC+AGG + chr4.4:4777906-4777925 None:intergenic 60.0%
ACCCCAGCATCAGCTGCAAC+AGG + chr4.4:4780576-4780595 None:intergenic 60.0%
ATCACCTCCAGGTCGCCTGT+AGG + chr4.4:4781006-4781025 None:intergenic 60.0%
CCAACCTCAGCCCGTAAACC+AGG + chr4.4:4782852-4782871 None:intergenic 60.0%
CCTCTGCGTGCTTACCACTC+CGG - chr4.4:4778660-4778679 MS.gene069595:intron 60.0%
CTTCCTGCTATCGCCGTCGT+TGG - chr4.4:4777031-4777050 MS.gene069595:CDS 60.0%
GCCTGTTGCAGCTGATGCTG+GGG - chr4.4:4780572-4780591 MS.gene069595:intron 60.0%
GGGCTTACGAAGGTCGCTGT+AGG - chr4.4:4777906-4777925 MS.gene069595:intron 60.0%
TGCACCGCCTTAGGTGACCA+CGG - chr4.4:4776974-4776993 MS.gene069595:CDS 60.0%
! CCTGGTTTACGGGCTGAGGT+TGG - chr4.4:4782849-4782868 MS.gene069595:intron 60.0%
! GGAGCCTGACTTGATGGAGG+CGG + chr4.4:4779665-4779684 None:intergenic 60.0%
!! GTCGTTGGTGGCCAGAGTTC+TGG - chr4.4:4777046-4777065 MS.gene069595:intron 60.0%
CCACCAACGACGGCGATAGC+AGG + chr4.4:4777037-4777056 None:intergenic 65.0%
CCGGAGTGGTAAGCACGCAG+AGG + chr4.4:4778663-4778682 None:intergenic 65.0%
CCTGCTATCGCCGTCGTTGG+TGG - chr4.4:4777034-4777053 MS.gene069595:CDS 65.0%
TACAATCAGGGGCCCTGCCG+AGG - chr4.4:4781199-4781218 MS.gene069595:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 4776932 4783767 4776932 ID=MS.gene069595
chr4.4 mRNA 4776932 4783767 4776932 ID=MS.gene069595.t1;Parent=MS.gene069595
chr4.4 exon 4783575 4783767 4783575 ID=MS.gene069595.t1.exon1;Parent=MS.gene069595.t1
chr4.4 CDS 4783575 4783767 4783575 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4783394 4783501 4783394 ID=MS.gene069595.t1.exon2;Parent=MS.gene069595.t1
chr4.4 CDS 4783394 4783501 4783394 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4783021 4783122 4783021 ID=MS.gene069595.t1.exon3;Parent=MS.gene069595.t1
chr4.4 CDS 4783021 4783122 4783021 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4782772 4782822 4782772 ID=MS.gene069595.t1.exon4;Parent=MS.gene069595.t1
chr4.4 CDS 4782772 4782822 4782772 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4782597 4782658 4782597 ID=MS.gene069595.t1.exon5;Parent=MS.gene069595.t1
chr4.4 CDS 4782597 4782658 4782597 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4781666 4781756 4781666 ID=MS.gene069595.t1.exon6;Parent=MS.gene069595.t1
chr4.4 CDS 4781666 4781756 4781666 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4781349 4781413 4781349 ID=MS.gene069595.t1.exon7;Parent=MS.gene069595.t1
chr4.4 CDS 4781349 4781413 4781349 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4780338 4780532 4780338 ID=MS.gene069595.t1.exon8;Parent=MS.gene069595.t1
chr4.4 CDS 4780338 4780532 4780338 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4780106 4780225 4780106 ID=MS.gene069595.t1.exon9;Parent=MS.gene069595.t1
chr4.4 CDS 4780106 4780225 4780106 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4779787 4779857 4779787 ID=MS.gene069595.t1.exon10;Parent=MS.gene069595.t1
chr4.4 CDS 4779787 4779857 4779787 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4779464 4779689 4779464 ID=MS.gene069595.t1.exon11;Parent=MS.gene069595.t1
chr4.4 CDS 4779464 4779689 4779464 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4779088 4779138 4779088 ID=MS.gene069595.t1.exon12;Parent=MS.gene069595.t1
chr4.4 CDS 4779088 4779138 4779088 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4777637 4777865 4777637 ID=MS.gene069595.t1.exon13;Parent=MS.gene069595.t1
chr4.4 CDS 4777637 4777865 4777637 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4777213 4777352 4777213 ID=MS.gene069595.t1.exon14;Parent=MS.gene069595.t1
chr4.4 CDS 4777213 4777352 4777213 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
chr4.4 exon 4776932 4777060 4776932 ID=MS.gene069595.t1.exon15;Parent=MS.gene069595.t1
chr4.4 CDS 4776932 4777060 4776932 ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1
Gene Sequence

>MS.gene069595

ATGGAAAACCTAATCTCATTAGTCAACAAAATCCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACTCTTTGGGATTCTCTTCCTGCTATCGCCGTCGTTGGTGGCCAGAGTTCTGGAAAATCCTCCGTATTGGAGAGTGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGTATTTTTTTTTATACAATTGGGGATTGTGAATTGTGATTTGAAATTTGTTCATAATTGATGCGTATTTGTAGGGATCGTTACTCGGAGACCACTTGTTTTGCAGCTTCACAAGAGTGATGAGGGAACAAGAGAATATGCTGAGTTTCTTCACCTTCCGAGGAAAAGATTCACCGATTTTGGTAACTTTTCTTTTGTCACTCTAATCTTCGCGTTTTTTCCCCCATTGATTTTACTGATTTGAATGTTATTGACTCTATTTGACCATTTTCAAAATGTTTCTATATATGTATGAGTTTTTGTGTTTTTTTCCCTTCTTTTTCTCATTGCTATTTAGTAAATGATCGTGCTATTTAGATTTTACTGATTCAAATGTTTTTGACTCTATTTGACCGATTTTGAAATGTTTCCATGTATGTATGGATGGTAATGGTGATGGTTTAATTTGTGTAGCTGCGGTGAGGAAGGAAATTCAAGATGAAACGGATAGAGAAACCGGTCGATCCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCAATGGTACGTTTGAATATATATATATATATATATATATATATATTTTATTATCTATTGTTGTACTGCATCCCTTATTCTTATATATAATATGTAGATCTGTCGGTAACAATGCTTAAGTACAGAAGCATCATCTTGTGGTCTATTTGTTTGCTCATTTTATTCAAGTGTTGAATTATGGGTGACCTTTTGTGACTCTTGCAGTTGTTAACTTGACACTCATCGATCTTCCTGGGCTTACGAAGGTCGCTGTAGGTATGCAATCAATTGACATGTCTTTCCTGTACACGGTTTTAAGGCTATTTAGTGTGAATTTTATTTTCGTAATGATGTACGAGATGCTCATAGATATTTTTGCATAACTGTAGATGGGCAACCTGAGAGTATTGTGCATGATATTGAGAATATGGTTCGCTCCTACATTGAGAAGGTAATGTTCATTCAAGTACTAAAGCTTTTAATAGGAAATAAAATATTTTCAGGATCAACTTATATGGTTTAATTTTTAAAAATAAATAACTAAGAAAAATATGGAGTGTAAGATCGTTTGAATTGTAGGATTCCCACAAATAGACAAAATTATAGAGATAAATAACTGAGAAAAATAACCTTTACATAATCATCCTATAGAAACATAACTTTTATCACTGATTTAATCATAAAGATGAGAGGTTGACCGAAACATATATAGATTTTTTTTTTATTAATTCCTACCACCGAATGATAATTGCATAGATTAAGAAGTTCCCAAGTTTGGAAGTAATTTCTCAACTAAAACCCAAGTCCCTATATTTAAATAAAAACCCCACCGAGTCCCATAAAAAAAGTCCAAGTTCAGTGCATCCCTTTATGCAATGAAAAAACAGATCAACTTTCGAGTCAAAAAACAAAACCCAGGTTGTAAAGGTGTGAGTTGTTTGGGTCAAAAACGGTTCACCATGGGAAACCAACACTAGAGAAAACGCTGCCCCATGATTCAACGATTTTCCTCTGCGTGCTTACCACTCCGGTCTCTTCAACGATTTTCATGGTTGGAGGGAGAAAAACACGTGAGATCTAATGATATCACAATCTTAATCGTGCTCTTAACAACCATTCTAGAAAGTTTATCTTGCAAAGTTCTCTGATGTGCAAAAATGACGTGCTTACCTTGTATTATGTATGAACATCATTAATTTCAAAAACTGTGGCAAGTTCTAGGTATAACATTTGTGTAAAAATTAGGCCCATGTACGAAAAGCAGTATGCTGAAATTGATGTTATTTTGCAGCCGAACTGTATAATTTTGGCTATTTCACCGGCTAATCAAGATATTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGTACTTTCAATATTTCCTTTTCTTTGGCTTTTAGCGTTCCCCATTTTGAATGCATTTAACGAATCTTTTTATGGTTTGTTGAGAATCAATAATTCAATATTTCAATATGTTGTATATTTACATCGCAGATTTAACCATTATTCTAACTTTTTGCACTGTTGATTTTTGGAGAACAAGCTGACTGAATTGGGCAACATTAAGTAAATAGTTTGATGGTTTTCTAATCATTGGTTTATTTGTTTCAACTTTTAGGCGAAAGAACCATTGGAGTTTTGACGAAGATTGATCTAATGGACAAGGGTACCGATGCTGTTGATGTAAGTCCAATTATTTTTTTTATTTTAATATAATAGCATGCAAACATGGTTATAGTTTGTTACAAGGTCAAAACAATGGAAAAGGGGTCGAAGATCTTGCATATGTCTACTATTATTATTATTGTTGTTGTTATTATTATTATTATTATTATTACTATCATCATCATCATCATCATTATTATCTGTGAACTCTGCAACTTAGTGTTAGAATATTGGGTCCATAATCCCAATTATGTATATCTATATAACCTTGTAAATACTCATTCTTTGCAAGTAGTAAAATATAATACATACAATTTTACATGGTTCATCCGCCTCCATCAAGTCAGGCTCCTTGGTTGAGTTAGTGCTAAGGTTGGGTATCATTCTATGGCATTGGTCACCTATGACTAATGAGCTTATCTGGATCAAGCAGCTAACTGATGAGTAGAAATTTACAGAGGTCTCTCATATGAAGTTGCTTTTTGATAATTATTAGTTGCTCTGTCAAAATAACTGTTAGCCTTCCATATTGAGGATATGGGCCTGATTTCAATTGACCTGCATTCTTATTTATTCTCTATGAGAATAACTTGTTAAGTATAGAATCTAGACATAGTTTCATATTTATAAGAACTAAGGAGTTGGGTGAATTGTTCATAAAGCTTGAAATTTCTCGTGTTAAAGTGTCTTTCTGCCTCAAACCGATTAATCCTTGCTCACCCCCTCGAGTTTATAGCATAACCCTGATAATGATCAGTTGTTTTATTCTAAGAAGCTATAAAAGTAAATACTTGATTCTGTACTGATCCATGATATATACTTTTGCTTGCTCAGATGTTGGAAGGGAGAGCATATAGGTTAAAGTTCCCTTGGATCGGTGTTGTGAACAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATAGTACTCCTGAATATAAACACCTAGCTAACAGAATGGGGTCTGAGCATCTGGCGAAGATGCTCTCAAAGGTACATCAAAAACAATATATAGCATCATTTGCTGAAATATTAGGTGTTCATTTTTATGTAAATCTGTTTTAGTAGCTTCCAACAACTAAAGTCATATTGATTTTTATATCAGCATTTGGAGACAGTAATCAAGTCCAAGATTCCAGGCATTCAGTCTCTAATTAGCAAAACAATAAATGAAATTGAAACCGAACTGGCTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGTAAGTTTGCTCTTATTTTCTAGCCATTTTAAATTCTCTGTTCCAAAACCATTGGTTACCTTGTCTTTCCCTCCAGACTTTTGTCATTTGTGTGTGTTTATACGGGCATTCGTCCCACATAATATCCATTTATTTTGATGAACTTAAATATTGATGTGGTGATGATTGGATAATATGACACTCCATTTTCAGGGATCCTTATTAAGTGTTTTCATGTTGACTAATGACTGCTTTGCCATCACATGCAGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTCAAAGACCATCTTGATGGCGTGTATGTGTTATACTTTTCTGATTGAAGTTAACATTTTACTGTGCAATTCGTTTGTTTTTTCATGCTGTATTTCCTTATTTGTGTCAATTTCCTACAGGCGACCTGGAGGTGATAAAATTTATAACGTCTTTGACAACCAGCTCCCTGCTGCTCTGAAAAGGTTGCAGTTTGACAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGATACCAACCTCATCTTATTGCTCCAGAGCAAGGATACCGTCGTCTCATTGAATCCACTCTAGTTACAATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCGGTATGTTTTTCACAAGAGAATTATCAATAGCAATTGAAATTTTGTACCCAATTTTTTTGAGAACTTATGTGGTAGTGGTGGTGTGCTATAAAGAATGTGTTGAAATAAAATACTTGATTAAAGAGAAAAAAAAAAAAAAAAAAAACTTTAGCCTCAAACATCAACCCTGTCTAAAAGCTGTAAATTAGTGATTTTTCTAATTGGATACTTTTTTATGTATTATGTGTTTTTGTCTTGGTTAATCTACTTAAGCATTCAGCTTTAATCTTTTGCTGATCTCTTTGGTCATACTCATTGAATTCTTGTTTTGAATTGATTCTTCCAGGTTCATTCGCTATTAAAGGACCTGGTTCACAAAGCTGTTAGTGAGACTCTGGTTTGTTCCTGGGACTTCTCATTTTACATTCCAGTTTTATTTCTTGCTGCTATATTTGTTCTAAATAAATTGTATAATTGCTGGTGCTCTTATTTCGCCGGGGAATTCTAGTGACAATGTTCATTTGGAAACAGCATTTGAATGGCTTCAATTTTAGAAGTTGAAATGTGCAGAGCTTTCGGGTTTTCTTTGATTGAGTATTAAGATATTTGTTCTAACTATCCCTCTGAATTTGCTTTGAGAATTCTAGAAGTGTTTGAGATAAAGGGTTTTCTTTCGGGTTTTCTTCGATTTTTTGTCCCTATAAATTTTCTGCTTTCAACTTCAGTACCTGCTTTTTTTACAAAAGTTCATGTTTTGTGTTCCAAATGACTTTTTTTAAGGTCTTATCAGTGATATGTCATCAAAAAAAGTCGCTTGGAACATGAAACGTGAACTTTTGTAAAAAACAGGAATTGAAATTGAAACCAGAAATTTAGAGGACCAAAAATCAAAGGAGAATTTTGGAGGGACGAAAACTGAAAGTTGGTATACTTAGAGGGGAGTAAAAACAATTTTAACACTACAAAATATAACCCATTCATATATTTACTTCTATTTTCTATTTATGGAATTATCATATAACCTGTACTTGTGAAAAGTCCATTTGACTAAACAATGATAATTATATTTTGTTACATGATAAGGGCCAGTATGAATTGAGCTTATTTACTGTCATAAGTTTTATGAGACTGTTTGGGGGAACATATGGAAACAGCTTATGACATTTTTCATAAGCTTATTTTAATTAGTTCTCCAAGATAGCTTTTGAAAACAACTTATATCATATCCAAAAACAATTTAACTGCATTTTATCTTCTGCTATAGAAATAGCATATGTAAGCTTATACATACGTGCTTATCATAATAAGCAGTTGTGACATAAGCTGCAAATAAGCTGTTTATCCAAACAGGGCCTAAATCTGTTCATTATCGAGTTCAAGTGTTAAAATAAAATATGTAACTGAAATAGTGATGTAGGTTATCTTTTTGTAATGCTATGGGCATTGGCAATGACTTTTGGCCTCTGGTCTGCTGTTTCATTGCTACTTTCTTGCAGTTCTTCTGCACAGGTTTACTTGCCCTTTTTGTAATAGTTGTTCATGATTAAATTAATACAATTGGAACCTGGTTTTCATTTACTGGCAATTTTCTCATCAATACTGGCTTTGTTTATTCTCAGGATTTGAAGCAATACCCTGGTTTACGGGCTGAGGTTGGGGCTGCAGCTATTGATTCGTTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACACTACAACTGGTCGATATGGAGTCTGGCTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGACAAGGGTGGCAACCCCACTCATTCAATTTTTGATAGATATAATGATTCTTATCTAAGGCGAATCGGTATGTCTTATTAAAAGCAGTCTCAAACTTGAACGGACGGTATATGGTTGCTCTCATAGTTTAATACTCCCTCCGGTCACTATTATAAGCAAAACTTCACTTTTTAGATACATTGAATAATTAATGTATCTAGTCTTTATTATAAACTAGATACATTAATTATCCAATATATTTAAAAAGTGAAGTTTTGCTTATAATAGTGACCCGGAGGGAGTATAGTATATCATCTGTCATTGTTAAATGGAACTTAAAACTGACTGTTCAATCTCACTCTGCGTATTCAGGAACAACAATTTTGTCATATGTCAATATGGTCTGCGCTACTCTACGACATTCAATTCCGAAGTCCATTGTTTATTGTCAAGTACGGGAGGCAAAAAGAAGCCTACTTGATCACTTTTTCACTGAGCTAGGAAAAATGGAGGTGAGAATAAATTTGCCTCTCCAAGTTTCCTGATTATACTTTTCATTTATTCAAAAAACTTGCTTAAAAGCAAAAAATTATTGAGCTGCTTTTAATTTAGTTTTTAAAGTTAAATAAATTAAGCGTTGTCTGCCTGTATATACTCTTTGCAGACCAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGCAAAGAGACTGGAGTTGTACCGAAGTGCCCAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAA

Protein sequence

>MS.gene069595.t1

MENLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTINEIETELARLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK