Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069595.t1 | XP_013447209.1 | 99.5 | 610 | 3 | 0 | 1 | 610 | 1 | 610 | 0.00E+00 | 1189.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069595.t1 | Q39828 | 95.2 | 610 | 29 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1151.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069595.t1 | A0A072TVN2 | 99.5 | 610 | 3 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1189.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053143 | MS.gene069595 | 0.814993 | 1.16E-51 | -1.69E-46 |
MS.gene054178 | MS.gene069595 | 0.824541 | 7.63E-54 | -1.69E-46 |
MS.gene054585 | MS.gene069595 | 0.837855 | 4.06E-57 | -1.69E-46 |
MS.gene055513 | MS.gene069595 | 0.80604 | 9.98E-50 | -1.69E-46 |
MS.gene059778 | MS.gene069595 | 0.828239 | 1.00E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene050237 | MS.gene069595 | PPI |
MS.gene022695 | MS.gene069595 | PPI |
MS.gene39665 | MS.gene069595 | PPI |
MS.gene94912 | MS.gene069595 | PPI |
MS.gene068345 | MS.gene069595 | PPI |
MS.gene26060 | MS.gene069595 | PPI |
MS.gene069595 | MS.gene39347 | PPI |
MS.gene59547 | MS.gene069595 | PPI |
MS.gene069595 | MS.gene010879 | PPI |
MS.gene056130 | MS.gene069595 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069595.t1 | MTR_8g099550 | 99.508 | 610 | 3 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1248 |
MS.gene069595.t1 | MTR_5g009150 | 89.853 | 611 | 61 | 1 | 1 | 610 | 1 | 611 | 0.0 | 1152 |
MS.gene069595.t1 | MTR_8g027675 | 83.553 | 608 | 99 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1077 |
MS.gene069595.t1 | MTR_4g098920 | 67.541 | 610 | 193 | 2 | 1 | 609 | 1 | 606 | 0.0 | 897 |
MS.gene069595.t1 | MTR_8g105580 | 66.505 | 618 | 191 | 4 | 1 | 608 | 4 | 615 | 0.0 | 890 |
MS.gene069595.t1 | MTR_7g451010 | 67.974 | 612 | 192 | 2 | 1 | 608 | 4 | 615 | 0.0 | 887 |
MS.gene069595.t1 | MTR_8g009510 | 66.139 | 632 | 190 | 2 | 1 | 608 | 4 | 635 | 0.0 | 887 |
MS.gene069595.t1 | MTR_1g032550 | 67.047 | 613 | 195 | 2 | 1 | 608 | 4 | 614 | 0.0 | 887 |
MS.gene069595.t1 | MTR_8g105580 | 67.474 | 578 | 172 | 4 | 1 | 568 | 4 | 575 | 0.0 | 840 |
MS.gene069595.t1 | MTR_8g009510 | 65.465 | 527 | 161 | 1 | 103 | 608 | 2 | 528 | 0.0 | 734 |
MS.gene069595.t1 | MTR_2g009690 | 39.596 | 495 | 278 | 6 | 4 | 489 | 24 | 506 | 6.61e-106 | 338 |
MS.gene069595.t1 | MTR_4g093750 | 38.742 | 493 | 281 | 5 | 4 | 487 | 15 | 495 | 9.74e-101 | 322 |
MS.gene069595.t1 | MTR_4g093750 | 38.259 | 494 | 286 | 4 | 4 | 488 | 15 | 498 | 4.56e-100 | 321 |
MS.gene069595.t1 | MTR_4g030140 | 29.808 | 520 | 318 | 12 | 1 | 495 | 4 | 501 | 1.48e-58 | 211 |
MS.gene069595.t1 | MTR_4g134680 | 29.412 | 476 | 298 | 11 | 40 | 495 | 41 | 498 | 3.86e-58 | 208 |
MS.gene069595.t1 | MTR_4g134680 | 29.412 | 476 | 298 | 11 | 40 | 495 | 41 | 498 | 1.24e-57 | 208 |
MS.gene069595.t1 | MTR_4g134680 | 29.412 | 476 | 298 | 11 | 40 | 495 | 41 | 498 | 3.47e-57 | 207 |
MS.gene069595.t1 | MTR_4g134680 | 33.333 | 201 | 134 | 0 | 295 | 495 | 1 | 201 | 1.12e-32 | 133 |
MS.gene069595.t1 | MTR_8g087770 | 42.632 | 190 | 99 | 3 | 34 | 219 | 68 | 251 | 4.84e-32 | 132 |
MS.gene069595.t1 | MTR_8g087750 | 33.546 | 313 | 190 | 8 | 34 | 340 | 71 | 371 | 8.30e-31 | 128 |
MS.gene069595.t1 | MTR_8g463270 | 26.331 | 338 | 217 | 6 | 9 | 326 | 31 | 356 | 1.25e-18 | 90.5 |
MS.gene069595.t1 | MTR_4g094300 | 27.723 | 202 | 135 | 5 | 21 | 214 | 28 | 226 | 1.43e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069595.t1 | AT5G42080 | 86.557 | 610 | 82 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1122 |
MS.gene069595.t1 | AT5G42080 | 86.557 | 610 | 82 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1122 |
MS.gene069595.t1 | AT5G42080 | 85.902 | 610 | 80 | 1 | 1 | 610 | 1 | 604 | 0.0 | 1107 |
MS.gene069595.t1 | AT3G61760 | 82.651 | 611 | 104 | 2 | 1 | 610 | 1 | 610 | 0.0 | 1071 |
MS.gene069595.t1 | AT3G61760 | 83.831 | 569 | 90 | 2 | 1 | 568 | 1 | 568 | 0.0 | 1010 |
MS.gene069595.t1 | AT3G60190 | 67.690 | 619 | 189 | 2 | 1 | 608 | 4 | 622 | 0.0 | 910 |
MS.gene069595.t1 | AT1G14830 | 68.791 | 612 | 185 | 3 | 1 | 608 | 4 | 613 | 0.0 | 907 |
MS.gene069595.t1 | AT2G44590 | 63.948 | 613 | 217 | 3 | 1 | 610 | 1 | 612 | 0.0 | 852 |
MS.gene069595.t1 | AT2G44590 | 61.375 | 611 | 215 | 4 | 1 | 608 | 1 | 593 | 0.0 | 808 |
MS.gene069595.t1 | AT2G44590 | 61.275 | 612 | 215 | 5 | 1 | 608 | 1 | 594 | 0.0 | 804 |
MS.gene069595.t1 | AT5G42080 | 88.345 | 429 | 50 | 0 | 1 | 429 | 1 | 429 | 0.0 | 804 |
MS.gene069595.t1 | AT3G61760 | 84.270 | 445 | 68 | 2 | 1 | 444 | 1 | 444 | 0.0 | 795 |
MS.gene069595.t1 | AT2G14120 | 36.273 | 499 | 293 | 7 | 3 | 487 | 20 | 507 | 1.35e-93 | 304 |
MS.gene069595.t1 | AT2G14120 | 36.128 | 501 | 295 | 7 | 3 | 489 | 20 | 509 | 4.15e-93 | 303 |
MS.gene069595.t1 | AT2G14120 | 36.273 | 499 | 293 | 7 | 3 | 487 | 20 | 507 | 4.51e-93 | 303 |
MS.gene069595.t1 | AT4G33650 | 36.948 | 498 | 292 | 6 | 3 | 488 | 36 | 523 | 1.23e-92 | 303 |
MS.gene069595.t1 | AT4G33650 | 36.948 | 498 | 292 | 6 | 3 | 488 | 36 | 523 | 1.36e-92 | 303 |
MS.gene069595.t1 | AT2G14120 | 34.659 | 528 | 291 | 9 | 3 | 487 | 20 | 536 | 9.88e-89 | 293 |
MS.gene069595.t1 | AT1G59610 | 30.561 | 517 | 315 | 14 | 1 | 495 | 4 | 498 | 1.22e-61 | 220 |
MS.gene069595.t1 | AT1G10290 | 30.250 | 519 | 314 | 13 | 1 | 495 | 4 | 498 | 8.56e-61 | 218 |
MS.gene069595.t1 | AT1G60500 | 29.810 | 473 | 284 | 14 | 34 | 483 | 65 | 512 | 2.37e-39 | 154 |
MS.gene069595.t1 | AT1G60530 | 46.524 | 187 | 96 | 3 | 34 | 219 | 62 | 245 | 3.09e-39 | 146 |
MS.gene069595.t1 | AT1G53140 | 31.651 | 218 | 120 | 5 | 9 | 214 | 47 | 247 | 1.77e-18 | 90.1 |
Find 151 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGGTTCATTCGCTATTAA+AGG | 0.155423 | 4.4:-4779120 | MS.gene069595:intron |
AGGAAAAGATTCACCGATTT+TGG | 0.158213 | 4.4:-4783393 | MS.gene069595:intron |
GCAGCCGAACTGTATAATTT+TGG | 0.190369 | 4.4:-4781738 | MS.gene069595:intron |
GAATGAGGATCCTGCAATTA+TGG | 0.256115 | 4.4:-4777015 | MS.gene069595:CDS |
AAGCCTGTTGCAGCTGATGC+TGG | 0.280429 | 4.4:-4780107 | MS.gene069595:CDS |
TGAAACCGAACTGGCTCGTT+TGG | 0.280984 | 4.4:-4780132 | MS.gene069595:CDS |
CTGGTTTACGGGCTGAGGTT+GGG | 0.283613 | 4.4:-4777827 | MS.gene069595:CDS |
GTCGTTGGTGGCCAGAGTTC+TGG | 0.296472 | 4.4:-4783631 | MS.gene069595:CDS |
TTAGCTAGGTGTTTATATTC+AGG | 0.300523 | 4.4:+4780378 | None:intergenic |
CTAAGGCGGTGCAAGCTCTT+TGG | 0.312942 | 4.4:+4783713 | None:intergenic |
TTTGACGAAGATTGATCTAA+TGG | 0.319005 | 4.4:-4781372 | MS.gene069595:CDS |
ATCTGACGGTTGATTTCTTT+CGG | 0.331884 | 4.4:-4777722 | MS.gene069595:CDS |
TGAAGCAATACCCTGGTTTA+CGG | 0.336223 | 4.4:-4777839 | MS.gene069595:CDS |
CAGAATGGGGTCTGAGCATC+TGG | 0.343447 | 4.4:-4780355 | MS.gene069595:CDS |
TGTGCATGATATTGAGAATA+TGG | 0.345216 | 4.4:-4782617 | MS.gene069595:CDS |
TAGTGCACTCCCTACTCTTT+GGG | 0.348707 | 4.4:-4783674 | MS.gene069595:CDS |
CTAGTGCACTCCCTACTCTT+TGG | 0.351916 | 4.4:-4783675 | MS.gene069595:CDS |
GATATAATGATTCTTATCTA+AGG | 0.354606 | 4.4:-4777644 | MS.gene069595:CDS |
AGGGACAGTTGAAATTTGTT+TGG | 0.356007 | 4.4:+4783049 | None:intergenic |
GAATATATGCTAAGATGAAT+AGG | 0.359659 | 4.4:+4783029 | None:intergenic |
AGCTTTCAATGGAAAATATA+AGG | 0.374495 | 4.4:-4779587 | MS.gene069595:CDS |
AGACTGAATGCCTGGAATCT+TGG | 0.385851 | 4.4:+4780181 | None:intergenic |
TTGACACTCATCGATCTTCC+TGG | 0.386900 | 4.4:-4782792 | MS.gene069595:CDS |
TGGTTTACGGGCTGAGGTTG+GGG | 0.387468 | 4.4:-4777826 | MS.gene069595:CDS |
GAAGCAATACCCTGGTTTAC+GGG | 0.387693 | 4.4:-4777838 | MS.gene069595:CDS |
GCATCAACAGCTGCCTCGGC+AGG | 0.388371 | 4.4:+4779465 | None:intergenic |
CCTGGTTTACGGGCTGAGGT+TGG | 0.394247 | 4.4:-4777828 | MS.gene069595:CDS |
AACTGCATCTATTTCAGCTT+GGG | 0.397169 | 4.4:+4776947 | None:intergenic |
AAAAGAAAAGTTACCAAAAT+CGG | 0.399826 | 4.4:+4783380 | None:intergenic |
AATCCACTCTAGTTACAATC+AGG | 0.400990 | 4.4:-4779491 | MS.gene069595:CDS |
GTTTGACAAGCAGCTTTCAA+TGG | 0.401921 | 4.4:-4779598 | MS.gene069595:CDS |
CAAAGAGCTTGCACCGCCTT+AGG | 0.402102 | 4.4:-4783712 | MS.gene069595:CDS |
AACACTACAACTGGTCGATA+TGG | 0.405406 | 4.4:-4777754 | MS.gene069595:CDS |
GAAACCGAACTGGCTCGTTT+GGG | 0.407691 | 4.4:-4780131 | MS.gene069595:CDS |
CTAATTAGAGACTGAATGCC+TGG | 0.416975 | 4.4:+4780173 | None:intergenic |
GATTTCTTACCTCGTGGATC+AGG | 0.421686 | 4.4:-4783574 | MS.gene069595:intron |
AAACACCTAGCTAACAGAAT+GGG | 0.429971 | 4.4:-4780369 | MS.gene069595:CDS |
CTTTCCCAAACGAGCCAGTT+CGG | 0.441013 | 4.4:+4780127 | None:intergenic |
ACCCCAGCATCAGCTGCAAC+AGG | 0.443010 | 4.4:+4780104 | None:intergenic |
ATATTCAAAGACCATCTTGA+TGG | 0.447318 | 4.4:-4779790 | MS.gene069595:CDS |
CCATTGTTTATTGTCAAGTA+CGG | 0.448290 | 4.4:-4777267 | MS.gene069595:CDS |
CAAAAGGGCAACACTACAAC+TGG | 0.449599 | 4.4:-4777763 | MS.gene069595:CDS |
CAAAGCTGTTAGTGAGACTC+TGG | 0.449716 | 4.4:-4779087 | MS.gene069595:intron |
GAATGAGAGATGAAAGCAAA+AGG | 0.450845 | 4.4:-4777779 | MS.gene069595:CDS |
CACTAACAGCTTTGTGAACC+AGG | 0.457295 | 4.4:+4779096 | None:intergenic |
CCTGCTATCGCCGTCGTTGG+TGG | 0.458671 | 4.4:-4783643 | MS.gene069595:CDS |
TTCTGGAAAATCCTCCGTAT+TGG | 0.463410 | 4.4:-4783614 | MS.gene069595:CDS |
AGCCTGTTGCAGCTGATGCT+GGG | 0.466361 | 4.4:-4780106 | MS.gene069595:CDS |
CCAACCTCAGCCCGTAAACC+AGG | 0.468070 | 4.4:+4777828 | None:intergenic |
CAGACCCCATTCTGTTAGCT+AGG | 0.470784 | 4.4:+4780364 | None:intergenic |
TCCGTATTGGAGAGTGTTGT+CGG | 0.471538 | 4.4:-4783601 | MS.gene069595:CDS |
AATATATGCTAAGATGAATA+GGG | 0.472521 | 4.4:+4783030 | None:intergenic |
AGCTCCCTGCTGCTCTGAAA+AGG | 0.472526 | 4.4:-4779626 | MS.gene069595:CDS |
CATATAGGTTAAAGTTCCCT+TGG | 0.473662 | 4.4:-4780494 | MS.gene069595:CDS |
AAATGAAATTGAAACCGAAC+TGG | 0.477658 | 4.4:-4780141 | MS.gene069595:CDS |
GAAGGAAATTCAAGATGAAA+CGG | 0.484800 | 4.4:-4783090 | MS.gene069595:CDS |
CTGAAATAGATGCAGTTGCT+TGG | 0.485487 | 4.4:-4776941 | MS.gene069595:CDS |
TGAAATTTGTTTGGATCGAC+CGG | 0.492583 | 4.4:+4783058 | None:intergenic |
TTGCTTGCTCAGATGTTGGA+AGG | 0.493499 | 4.4:-4780522 | MS.gene069595:intron |
AGACGACGGTATCCTTGCTC+TGG | 0.498380 | 4.4:+4779519 | None:intergenic |
CTACGACGTTCCATAATTGC+AGG | 0.498628 | 4.4:+4777005 | None:intergenic |
CAACTGGTCGATATGGAGTC+TGG | 0.501050 | 4.4:-4777747 | MS.gene069595:CDS |
GTAATCAAGTCCAAGATTCC+AGG | 0.501222 | 4.4:-4780191 | MS.gene069595:CDS |
CAACTGCATCTATTTCAGCT+TGG | 0.501627 | 4.4:+4776946 | None:intergenic |
TTTGTCCTCATTACTGAATG+AGG | 0.502603 | 4.4:-4777030 | MS.gene069595:CDS |
TATTTGTAGGGATCGTTACT+CGG | 0.504045 | 4.4:-4783488 | MS.gene069595:intron |
ATAGCCAAAATTATACAGTT+CGG | 0.504975 | 4.4:+4781734 | None:intergenic |
ATACCCTGGTTTACGGGCTG+AGG | 0.506554 | 4.4:-4777832 | MS.gene069595:CDS |
CCACCAACGACGGCGATAGC+AGG | 0.509781 | 4.4:+4783643 | None:intergenic |
CATTGTTTATTGTCAAGTAC+GGG | 0.511383 | 4.4:-4777266 | MS.gene069595:CDS |
TACCGGTAGGATCCACTTCA+CGG | 0.512959 | 4.4:+4781663 | None:intergenic |
TGTTGGAAGGGAGAGCATAT+AGG | 0.515104 | 4.4:-4780509 | MS.gene069595:CDS |
CTGAGTTTCTTCACCTTCCG+AGG | 0.516849 | 4.4:-4783413 | MS.gene069595:CDS |
GATTCTTATCTAAGGCGAAT+CGG | 0.517945 | 4.4:-4777636 | MS.gene069595:intron |
GATGAAACGGATAGAGAAAC+CGG | 0.518246 | 4.4:-4783077 | MS.gene069595:CDS |
TGCTTGCTCAGATGTTGGAA+GGG | 0.521748 | 4.4:-4780521 | MS.gene069595:intron |
CCACCCTTGTCCACATCTTG+AGG | 0.522131 | 4.4:+4777693 | None:intergenic |
AATTAAAATTTCCCGTGAAG+TGG | 0.523008 | 4.4:-4781675 | MS.gene069595:CDS |
TACCGCATCAACAGCTGCCT+CGG | 0.523525 | 4.4:+4779461 | None:intergenic |
TAAACACCTAGCTAACAGAA+TGG | 0.524545 | 4.4:-4780370 | MS.gene069595:CDS |
GGGCAAGTTATATGCAATCA+TGG | 0.524553 | 4.4:-4779836 | MS.gene069595:CDS |
TAGTGGCCTTGCAAAGAGAC+TGG | 0.526892 | 4.4:-4776985 | MS.gene069595:CDS |
TCAATTTCCTACAGGCGACC+TGG | 0.527613 | 4.4:-4779681 | MS.gene069595:intron |
GGAAGAGAATCCCAAAGAGT+AGG | 0.528008 | 4.4:+4783664 | None:intergenic |
AGATTCACCGTGGTCACCTA+AGG | 0.530232 | 4.4:+4783696 | None:intergenic |
ATATCATGCACAATACTCTC+AGG | 0.530313 | 4.4:+4782628 | None:intergenic |
TTGTGTAGCTGCGGTGAGGA+AGG | 0.537663 | 4.4:-4783108 | MS.gene069595:intron |
TGACACTCATCGATCTTCCT+GGG | 0.537665 | 4.4:-4782791 | MS.gene069595:CDS |
CAGTAATGAGGACAAACGCT+TGG | 0.541024 | 4.4:+4777037 | None:intergenic |
GTTGCAATATCTTGATTAGC+CGG | 0.541684 | 4.4:+4781707 | None:intergenic |
GCCGACAACACTCTCCAATA+CGG | 0.542785 | 4.4:+4783600 | None:intergenic |
GAAGAGAATCCCAAAGAGTA+GGG | 0.542886 | 4.4:+4783665 | None:intergenic |
CTATTTCAGCTTGGGCACTT+CGG | 0.542999 | 4.4:+4776955 | None:intergenic |
CTTCCTGCTATCGCCGTCGT+TGG | 0.543291 | 4.4:-4783646 | MS.gene069595:CDS |
TGCCGAGGCAGCTGTTGATG+CGG | 0.543898 | 4.4:-4779463 | MS.gene069595:intron |
CAGCTTCACAAGAGTGATGA+GGG | 0.550682 | 4.4:-4783450 | MS.gene069595:CDS |
GAACATTACCTTCTCAATGT+AGG | 0.558262 | 4.4:+4782588 | None:intergenic |
TCATTCGCTATTAAAGGACC+TGG | 0.558428 | 4.4:-4779114 | MS.gene069595:CDS |
AGGTTAAAGTTCCCTTGGAT+CGG | 0.560301 | 4.4:-4780489 | MS.gene069595:CDS |
AATGAGAGATGAAAGCAAAA+GGG | 0.561742 | 4.4:-4777778 | MS.gene069595:CDS |
AAACTTATTACAGAAGCTGA+TGG | 0.561888 | 4.4:-4779564 | MS.gene069595:CDS |
TACAATCAGGGGCCCTGCCG+AGG | 0.565034 | 4.4:-4779478 | MS.gene069595:CDS |
CATCTTATTGCTCCAGAGCA+AGG | 0.566493 | 4.4:-4779531 | MS.gene069595:CDS |
CATCAACAGCTGCCTCGGCA+GGG | 0.569211 | 4.4:+4779466 | None:intergenic |
TCGGAAGCTTCCTCAAGATG+TGG | 0.572910 | 4.4:-4777703 | MS.gene069595:CDS |
CTGTTCACAACACCGATCCA+AGG | 0.576821 | 4.4:+4780477 | None:intergenic |
CGATCTTCCTGGGCTTACGA+AGG | 0.578446 | 4.4:-4782781 | MS.gene069595:CDS |
CTGGAGCAATAAGATGAGGT+TGG | 0.582750 | 4.4:+4779538 | None:intergenic |
TGACAATAAACAATGGACTT+CGG | 0.583582 | 4.4:+4777274 | None:intergenic |
AGGATCCTCATTCAGTAATG+AGG | 0.586057 | 4.4:+4777025 | None:intergenic |
GGCAAAGATTTCTTACCTCG+TGG | 0.586975 | 4.4:-4783580 | MS.gene069595:CDS |
CTTAGCATATATTCTCCCAA+TGG | 0.587409 | 4.4:-4783020 | MS.gene069595:intron |
TCCCGTGAAGTGGATCCTAC+CGG | 0.593357 | 4.4:-4781665 | MS.gene069595:intron |
TTGTGAAGCTGCAAAACAAG+TGG | 0.596364 | 4.4:+4783462 | None:intergenic |
AATCTTCGTCAAAACTCCAA+TGG | 0.598241 | 4.4:+4781382 | None:intergenic |
GCCCCTGATTGTAACTAGAG+TGG | 0.598316 | 4.4:+4779488 | None:intergenic |
GCAGCTTCACAAGAGTGATG+AGG | 0.600736 | 4.4:-4783451 | MS.gene069595:CDS |
ACAGCGACCTTCGTAAGCCC+AGG | 0.603913 | 4.4:+4782774 | None:intergenic |
ATCCACTCTAGTTACAATCA+GGG | 0.605709 | 4.4:-4779490 | MS.gene069595:CDS |
ACCGGTAGGATCCACTTCAC+GGG | 0.605810 | 4.4:+4781664 | None:intergenic |
GCTTCCTCAAGATGTGGACA+AGG | 0.607803 | 4.4:-4777697 | MS.gene069595:CDS |
ACACATACACGCCATCAAGA+TGG | 0.610251 | 4.4:+4779779 | None:intergenic |
AGAACTCTGGCCACCAACGA+CGG | 0.610611 | 4.4:+4783633 | None:intergenic |
GCCTGTTGCAGCTGATGCTG+GGG | 0.614544 | 4.4:-4780105 | MS.gene069595:intron |
TATGGAGTCTGGCTATCTGA+CGG | 0.622814 | 4.4:-4777736 | MS.gene069595:CDS |
ACAACTCCAGTCTCTTTGCA+AGG | 0.623060 | 4.4:+4776979 | None:intergenic |
TGCTCTGGAGCAATAAGATG+AGG | 0.624218 | 4.4:+4779534 | None:intergenic |
CCGTACTTGACAATAAACAA+TGG | 0.625270 | 4.4:+4777267 | None:intergenic |
CAGGATTTGAAGCAATACCC+TGG | 0.628775 | 4.4:-4777846 | MS.gene069595:CDS |
GGGCTTACGAAGGTCGCTGT+AGG | 0.630278 | 4.4:-4782771 | MS.gene069595:intron |
TGTTCACAACACCGATCCAA+GGG | 0.632790 | 4.4:+4780478 | None:intergenic |
GGTTCGCTCCTACATTGAGA+AGG | 0.633877 | 4.4:-4782596 | MS.gene069595:intron |
TCTGGCGAAGATGCTCTCAA+AGG | 0.634471 | 4.4:-4780337 | MS.gene069595:intron |
TCCACTCTAGTTACAATCAG+GGG | 0.638669 | 4.4:-4779489 | MS.gene069595:CDS |
TGGACTTACATCAACAGCAT+CGG | 0.640860 | 4.4:+4781340 | None:intergenic |
AACACCTAGCTAACAGAATG+GGG | 0.640990 | 4.4:-4780368 | MS.gene069595:CDS |
GCAATTATGGAACGTCGTAG+TGG | 0.642760 | 4.4:-4777002 | MS.gene069595:CDS |
TGTTTATTGTCAAGTACGGG+AGG | 0.645558 | 4.4:-4777263 | MS.gene069595:CDS |
CCTCAAGATGTGGACAAGGG+TGG | 0.645800 | 4.4:-4777693 | MS.gene069595:CDS |
GAAGATTGATCTAATGGACA+AGG | 0.654022 | 4.4:-4781366 | MS.gene069595:CDS |
TTCACCGTGGTCACCTAAGG+CGG | 0.656734 | 4.4:+4783699 | None:intergenic |
CAACCTCAGCCCGTAAACCA+GGG | 0.671483 | 4.4:+4777829 | None:intergenic |
TGCACCGCCTTAGGTGACCA+CGG | 0.675185 | 4.4:-4783703 | MS.gene069595:CDS |
TAATTTGTGTAGCTGCGGTG+AGG | 0.676029 | 4.4:-4783112 | MS.gene069595:intron |
ATTTCCTACAGGCGACCTGG+AGG | 0.691883 | 4.4:-4779678 | MS.gene069595:intron |
GACAACACTCTCCAATACGG+AGG | 0.703245 | 4.4:+4783603 | None:intergenic |
CTTCCTCAAGATGTGGACAA+GGG | 0.710629 | 4.4:-4777696 | MS.gene069595:CDS |
GAGTGGATTCAATGAGACGA+CGG | 0.714501 | 4.4:+4779505 | None:intergenic |
AAGATTGATCTAATGGACAA+GGG | 0.722186 | 4.4:-4781365 | MS.gene069595:CDS |
ATGTTGACATGATTGCTGCA+AGG | 0.728270 | 4.4:-4780431 | MS.gene069595:CDS |
GGAGTGCACTAGATTCACCG+TGG | 0.804143 | 4.4:+4783686 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAATAAAAAAAATAAT+TGG | + | chr4.4:4779360-4779379 | None:intergenic | 0.0% |
!! | AAAAAAATCTATATATGTTT+CGG | + | chr4.4:4778352-4778371 | None:intergenic | 10.0% |
!! | ACATATTATATATAAGAATA+AGG | + | chr4.4:4777748-4777767 | None:intergenic | 10.0% |
!! | ATAAATAACTAAGAAAAATA+TGG | - | chr4.4:4778184-4778203 | MS.gene069595:intron | 10.0% |
!! | CATATTATATATAAGAATAA+GGG | + | chr4.4:4777747-4777766 | None:intergenic | 10.0% |
!! | TTATATAGATATACATAATT+GGG | + | chr4.4:4779579-4779598 | None:intergenic | 10.0% |
!!! | GTATTTTTTTTTATACAATT+GGG | - | chr4.4:4777125-4777144 | MS.gene069595:intron | 10.0% |
!!! | TATTTTTTTTTATACAATTG+GGG | - | chr4.4:4777126-4777145 | MS.gene069595:intron | 10.0% |
!! | AAAATAAATGGATATTATGT+GGG | + | chr4.4:4780710-4780729 | None:intergenic | 15.0% |
!! | AATAGAAGTAAATATATGAA+TGG | + | chr4.4:4782191-4782210 | None:intergenic | 15.0% |
!! | ATAACATTTGTGTAAAAATT+AGG | - | chr4.4:4778875-4778894 | MS.gene069595:intron | 15.0% |
!! | ATAGAAGTAAATATATGAAT+GGG | + | chr4.4:4782190-4782209 | None:intergenic | 15.0% |
!! | CATGATTAAATTAATACAAT+TGG | - | chr4.4:4782753-4782772 | MS.gene069595:intron | 15.0% |
!! | GTTATATAGATATACATAAT+TGG | + | chr4.4:4779580-4779599 | None:intergenic | 15.0% |
!! | TAAATAAATTGTATAATTGC+TGG | - | chr4.4:4781673-4781692 | MS.gene069595:CDS | 15.0% |
!! | TTTCATATTTATAAGAACTA+AGG | - | chr4.4:4779949-4779968 | MS.gene069595:intron | 15.0% |
!!! | AAATTAGTGATTTTTCTAAT+TGG | - | chr4.4:4781417-4781436 | MS.gene069595:intron | 15.0% |
!!! | AATAAATGAAAAGTATAATC+AGG | + | chr4.4:4783518-4783537 | None:intergenic | 15.0% |
!!! | ACTTCACTTTTTAAATATAT+TGG | + | chr4.4:4783229-4783248 | None:intergenic | 15.0% |
!!! | ATAATACATACAATTTTACA+TGG | - | chr4.4:4779634-4779653 | MS.gene069595:CDS | 15.0% |
!!! | ATAGGAAATAAAATATTTTC+AGG | - | chr4.4:4778133-4778152 | MS.gene069595:intron | 15.0% |
!!! | ATATAGAAACATTTTGAAAA+TGG | + | chr4.4:4777391-4777410 | None:intergenic | 15.0% |
!!! | GGTATTTTTTTTTATACAAT+TGG | - | chr4.4:4777124-4777143 | MS.gene069595:intron | 15.0% |
!!! | TATATTTTGTTACATGATAA+GGG | - | chr4.4:4782277-4782296 | MS.gene069595:intron | 15.0% |
!!! | TTACTTCTATTTTCTATTTA+TGG | - | chr4.4:4782200-4782219 | MS.gene069595:intron | 15.0% |
!!! | TTATATTTTGTTACATGATA+AGG | - | chr4.4:4782276-4782295 | MS.gene069595:intron | 15.0% |
!!! | TTTAAGTTCATCAAAATAAA+TGG | + | chr4.4:4780722-4780741 | None:intergenic | 15.0% |
!! | AAAAGAAAAGTTACCAAAAT+CGG | + | chr4.4:4777300-4777319 | None:intergenic | 20.0% |
!! | AATATATGCTAAGATGAATA+GGG | + | chr4.4:4777650-4777669 | None:intergenic | 20.0% |
!! | ACATAAGTTCTCAAAAAAAT+TGG | + | chr4.4:4781286-4781305 | None:intergenic | 20.0% |
!! | ACATTAAGTAAATAGTTTGA+TGG | - | chr4.4:4779227-4779246 | MS.gene069595:intron | 20.0% |
!! | ATCATTAATTTCAAAAACTG+TGG | - | chr4.4:4778840-4778859 | MS.gene069595:intron | 20.0% |
!! | ATGAACAACTATTACAAAAA+GGG | + | chr4.4:4782736-4782755 | None:intergenic | 20.0% |
!! | ATTATCATTGTTTAGTCAAA+TGG | + | chr4.4:4782257-4782276 | None:intergenic | 20.0% |
!! | ATTCAAATCAGTAAAATCAA+TGG | + | chr4.4:4777350-4777369 | None:intergenic | 20.0% |
!! | CAAAATAAATGGATATTATG+TGG | + | chr4.4:4780711-4780730 | None:intergenic | 20.0% |
!! | CATAAGTTCTCAAAAAAATT+GGG | + | chr4.4:4781285-4781304 | None:intergenic | 20.0% |
!! | GATATAATGATTCTTATCTA+AGG | - | chr4.4:4783033-4783052 | MS.gene069595:CDS | 20.0% |
!! | TAATCTATGCAATTATCATT+CGG | + | chr4.4:4778392-4778411 | None:intergenic | 20.0% |
!! | TATATAATATGTAGATCTGT+CGG | - | chr4.4:4777756-4777775 | MS.gene069595:CDS | 20.0% |
!! | TTATTTAAATATAGGGACTT+GGG | + | chr4.4:4778453-4778472 | None:intergenic | 20.0% |
!! | TTCAAATCAGTAAAATCAAT+GGG | + | chr4.4:4777349-4777368 | None:intergenic | 20.0% |
!! | TTGAAAGCAGAAAATTTATA+GGG | + | chr4.4:4781914-4781933 | None:intergenic | 20.0% |
!! | TTTATTTAAATATAGGGACT+TGG | + | chr4.4:4778454-4778473 | None:intergenic | 20.0% |
!!! | AAATGCAGTTAAATTGTTTT+TGG | + | chr4.4:4782444-4782463 | None:intergenic | 20.0% |
!!! | AATTTTGTCATATGTCAATA+TGG | - | chr4.4:4783354-4783373 | MS.gene069595:intron | 20.0% |
!!! | AATTTTTTTGAGAACTTATG+TGG | - | chr4.4:4781285-4781304 | MS.gene069595:intron | 20.0% |
!!! | CTATAATTTTGTCTATTTGT+GGG | + | chr4.4:4778238-4778257 | None:intergenic | 20.0% |
!!! | GATAAAAGTTATGTTTCTAT+AGG | + | chr4.4:4778299-4778318 | None:intergenic | 20.0% |
!!! | GGGGTTTTTATTTAAATATA+GGG | + | chr4.4:4778460-4778479 | None:intergenic | 20.0% |
!!! | GTTTATTTGTTTCAACTTTT+AGG | - | chr4.4:4779264-4779283 | MS.gene069595:intron | 20.0% |
!!! | TCTATAATTTTGTCTATTTG+TGG | + | chr4.4:4778239-4778258 | None:intergenic | 20.0% |
!!! | TGGGGTTTTTATTTAAATAT+AGG | + | chr4.4:4778461-4778480 | None:intergenic | 20.0% |
!!! | TTATCTTTTTGTAATGCTAT+GGG | - | chr4.4:4782633-4782652 | MS.gene069595:CDS | 20.0% |
!!! | TTATTCAAGTGTTGAATTAT+GGG | - | chr4.4:4777832-4777851 | MS.gene069595:CDS | 20.0% |
!!! | TTGATTTTTATATCAGCATT+TGG | - | chr4.4:4780458-4780477 | MS.gene069595:CDS | 20.0% |
!!! | TTTATTCAAGTGTTGAATTA+TGG | - | chr4.4:4777831-4777850 | MS.gene069595:CDS | 20.0% |
!!! | TTTCAATATTTCCTTTTCTT+TGG | - | chr4.4:4779038-4779057 | MS.gene069595:intron | 20.0% |
! | AAAACAACTGATCATTATCA+GGG | + | chr4.4:4780077-4780096 | None:intergenic | 25.0% |
! | AAATAGCAATGAGAAAAAGA+AGG | + | chr4.4:4777439-4777458 | None:intergenic | 25.0% |
! | AAATTAATACAATTGGAACC+TGG | - | chr4.4:4782760-4782779 | MS.gene069595:intron | 25.0% |
! | AATAGCAATGAGAAAAAGAA+GGG | + | chr4.4:4777438-4777457 | None:intergenic | 25.0% |
! | AATATAATAGCATGCAAACA+TGG | - | chr4.4:4779377-4779396 | MS.gene069595:intron | 25.0% |
! | AATTGAAACCAGAAATTTAG+AGG | - | chr4.4:4782071-4782090 | MS.gene069595:intron | 25.0% |
! | ACATGGAAACATTTCAAAAT+CGG | + | chr4.4:4777519-4777538 | None:intergenic | 25.0% |
! | AGACCTTAAAAAAAGTCATT+TGG | + | chr4.4:4781979-4781998 | None:intergenic | 25.0% |
! | AGCTTTCAATGGAAAATATA+AGG | - | chr4.4:4781090-4781109 | MS.gene069595:intron | 25.0% |
! | AGTGCAAAAAGTTAGAATAA+TGG | + | chr4.4:4779171-4779190 | None:intergenic | 25.0% |
! | ATAATTGATGCGTATTTGTA+GGG | - | chr4.4:4777177-4777196 | MS.gene069595:intron | 25.0% |
! | ATAGCCAAAATTATACAGTT+CGG | + | chr4.4:4778946-4778965 | None:intergenic | 25.0% |
! | ATATATTCAAACGTACCATT+GGG | + | chr4.4:4777675-4777694 | None:intergenic | 25.0% |
! | ATCAATATGACTTTAGTTGT+TGG | + | chr4.4:4780443-4780462 | None:intergenic | 25.0% |
! | ATTTATAAGAACTAAGGAGT+TGG | - | chr4.4:4779955-4779974 | MS.gene069595:intron | 25.0% |
! | CAACATGAAAACACTTAATA+AGG | + | chr4.4:4780793-4780812 | None:intergenic | 25.0% |
! | CAACTTAGTGTTAGAATATT+GGG | - | chr4.4:4779545-4779564 | MS.gene069595:CDS | 25.0% |
! | CATGAACAACTATTACAAAA+AGG | + | chr4.4:4782737-4782756 | None:intergenic | 25.0% |
! | CTATCAAAAATTGAATGAGT+GGG | + | chr4.4:4783014-4783033 | None:intergenic | 25.0% |
! | GAATATATGCTAAGATGAAT+AGG | + | chr4.4:4777651-4777670 | None:intergenic | 25.0% |
! | GATATACATAATTGGGATTA+TGG | + | chr4.4:4779572-4779591 | None:intergenic | 25.0% |
! | GATGAACTTAAATATTGATG+TGG | - | chr4.4:4780730-4780749 | MS.gene069595:intron | 25.0% |
! | GATTTAATCATAAAGATGAG+AGG | - | chr4.4:4778322-4778341 | MS.gene069595:intron | 25.0% |
! | GTTGAAAGCAGAAAATTTAT+AGG | + | chr4.4:4781915-4781934 | None:intergenic | 25.0% |
! | TAAAACAACTGATCATTATC+AGG | + | chr4.4:4780078-4780097 | None:intergenic | 25.0% |
! | TAAATAAGCTCAATTCATAC+TGG | + | chr4.4:4782303-4782322 | None:intergenic | 25.0% |
! | TAGAGAATAAATAAGAATGC+AGG | + | chr4.4:4779893-4779912 | None:intergenic | 25.0% |
! | TATATATTCAAACGTACCAT+TGG | + | chr4.4:4777676-4777695 | None:intergenic | 25.0% |
! | TATCAAAAATTGAATGAGTG+GGG | + | chr4.4:4783013-4783032 | None:intergenic | 25.0% |
! | TATCATCTGTCATTGTTAAA+TGG | - | chr4.4:4783284-4783303 | MS.gene069595:intron | 25.0% |
! | TCAAATCAGTAAAATCAATG+GGG | + | chr4.4:4777348-4777367 | None:intergenic | 25.0% |
! | TCGTTAAATGCATTCAAAAT+GGG | + | chr4.4:4779076-4779095 | None:intergenic | 25.0% |
! | TCTATAGGATGATTATGTAA+AGG | + | chr4.4:4778284-4778303 | None:intergenic | 25.0% |
! | TCTATCAAAAATTGAATGAG+TGG | + | chr4.4:4783015-4783034 | None:intergenic | 25.0% |
! | TGATGTTCATACATAATACA+AGG | + | chr4.4:4778824-4778843 | None:intergenic | 25.0% |
! | TTCGTTAAATGCATTCAAAA+TGG | + | chr4.4:4779077-4779096 | None:intergenic | 25.0% |
! | TTGGAACAGAGAATTTAAAA+TGG | + | chr4.4:4780620-4780639 | None:intergenic | 25.0% |
! | TTTATAAGAACTAAGGAGTT+GGG | - | chr4.4:4779956-4779975 | MS.gene069595:intron | 25.0% |
!! | AAAAGTATAATCAGGAAACT+TGG | + | chr4.4:4783510-4783529 | None:intergenic | 25.0% |
!! | AAAGGAAATATTGAAAGTAC+CGG | + | chr4.4:4779034-4779053 | None:intergenic | 25.0% |
!! | ATTTTTGCATAACTGTAGAT+GGG | - | chr4.4:4778023-4778042 | MS.gene069595:intron | 25.0% |
!! | CAAAAATCAAAGGAGAATTT+TGG | - | chr4.4:4782096-4782115 | MS.gene069595:intron | 25.0% |
!! | CAAGTACTAAAGCTTTTAAT+AGG | - | chr4.4:4778115-4778134 | MS.gene069595:intron | 25.0% |
!! | GCATTTAACGAATCTTTTTA+TGG | - | chr4.4:4779085-4779104 | MS.gene069595:intron | 25.0% |
!! | GTTATCTTTTTGTAATGCTA+TGG | - | chr4.4:4782632-4782651 | MS.gene069595:CDS | 25.0% |
!! | TAATTTACAGCTTTTAGACA+GGG | + | chr4.4:4781403-4781422 | None:intergenic | 25.0% |
!! | TGAACTTTTGTAAAAAAAGC+AGG | + | chr4.4:4781945-4781964 | None:intergenic | 25.0% |
!! | TTATAAATTTTATCACCTCC+AGG | + | chr4.4:4781017-4781036 | None:intergenic | 25.0% |
!!! | ATAAGTTTTATGAGACTGTT+TGG | - | chr4.4:4782328-4782347 | MS.gene069595:intron | 25.0% |
!!! | ATTTTCAGGATCAACTTATA+TGG | - | chr4.4:4778147-4778166 | MS.gene069595:intron | 25.0% |
!!! | CAAAATTCTCCTTTGATTTT+TGG | + | chr4.4:4782098-4782117 | None:intergenic | 25.0% |
!!! | CTGTTTTTTCATTGCATAAA+GGG | + | chr4.4:4778519-4778538 | None:intergenic | 25.0% |
!!! | GTTCCAAATGACTTTTTTTA+AGG | - | chr4.4:4781973-4781992 | MS.gene069595:intron | 25.0% |
!!! | TAAGTTTTATGAGACTGTTT+GGG | - | chr4.4:4782329-4782348 | MS.gene069595:intron | 25.0% |
!!! | TATAATTTTGGCTATTTCAC+CGG | - | chr4.4:4778951-4778970 | MS.gene069595:intron | 25.0% |
!!! | TATTTTTGCATAACTGTAGA+TGG | - | chr4.4:4778022-4778041 | MS.gene069595:intron | 25.0% |
!!! | TCTGTTTTTTCATTGCATAA+AGG | + | chr4.4:4778520-4778539 | None:intergenic | 25.0% |
!!! | TGAACTTGGACTTTTTTTAT+GGG | + | chr4.4:4778490-4778509 | None:intergenic | 25.0% |
!!! | TGTATTATGTGTTTTTGTCT+TGG | - | chr4.4:4781451-4781470 | MS.gene069595:intron | 25.0% |
!!! | TTTGATGGTTTTCTAATCAT+TGG | - | chr4.4:4779242-4779261 | MS.gene069595:intron | 25.0% |
!!! | TTTTGTTGACTAATGAGATT+AGG | + | chr4.4:4776943-4776962 | None:intergenic | 25.0% |
AAACTTATTACAGAAGCTGA+TGG | - | chr4.4:4781113-4781132 | MS.gene069595:intron | 30.0% | |
AAATGAAATTGAAACCGAAC+TGG | - | chr4.4:4780536-4780555 | MS.gene069595:intron | 30.0% | |
AAGGTCAAAACAATGGAAAA+GGG | - | chr4.4:4779414-4779433 | MS.gene069595:intron | 30.0% | |
AATAAGCTGTTTATCCAAAC+AGG | - | chr4.4:4782543-4782562 | MS.gene069595:intron | 30.0% | |
AATGAGAGATGAAAGCAAAA+GGG | - | chr4.4:4782899-4782918 | MS.gene069595:intron | 30.0% | |
AATTAAAATTTCCCGTGAAG+TGG | - | chr4.4:4779002-4779021 | MS.gene069595:intron | 30.0% | |
AATTCTCAAAGCAAATTCAG+AGG | + | chr4.4:4781838-4781857 | None:intergenic | 30.0% | |
ACTCGATAATGAACAGATTT+AGG | + | chr4.4:4782570-4782589 | None:intergenic | 30.0% | |
ATAAGCTGTTTATCCAAACA+GGG | - | chr4.4:4782544-4782563 | MS.gene069595:intron | 30.0% | |
ATAGCAGCAAGAAATAAAAC+TGG | + | chr4.4:4781645-4781664 | None:intergenic | 30.0% | |
ATATTCAAAGACCATCTTGA+TGG | - | chr4.4:4780887-4780906 | MS.gene069595:intron | 30.0% | |
ATTCTCAAAGCAAATTCAGA+GGG | + | chr4.4:4781837-4781856 | None:intergenic | 30.0% | |
ATTTGGAAACAGCATTTGAA+TGG | - | chr4.4:4781734-4781753 | MS.gene069595:CDS | 30.0% | |
CAAATCAGTAAAATCAATGG+GGG | + | chr4.4:4777347-4777366 | None:intergenic | 30.0% | |
CATAATTGATGCGTATTTGT+AGG | - | chr4.4:4777176-4777195 | MS.gene069595:intron | 30.0% | |
CATTGTTTATTGTCAAGTAC+GGG | - | chr4.4:4783411-4783430 | MS.gene069595:CDS | 30.0% | |
CCATTGTTTATTGTCAAGTA+CGG | - | chr4.4:4783410-4783429 | MS.gene069595:CDS | 30.0% | |
CGTTAAATGCATTCAAAATG+GGG | + | chr4.4:4779075-4779094 | None:intergenic | 30.0% | |
GAAATGTTTCCATGTATGTA+TGG | - | chr4.4:4777524-4777543 | MS.gene069595:intron | 30.0% | |
GAAGGAAATTCAAGATGAAA+CGG | - | chr4.4:4777587-4777606 | MS.gene069595:intron | 30.0% | |
GAGAAATTACTTCCAAACTT+GGG | + | chr4.4:4778422-4778441 | None:intergenic | 30.0% | |
GCAAAGAATGAGTATTTACA+AGG | + | chr4.4:4779602-4779621 | None:intergenic | 30.0% | |
GCAACTTAGTGTTAGAATAT+TGG | - | chr4.4:4779544-4779563 | MS.gene069595:CDS | 30.0% | |
GTAGGAAATTGACACAAATA+AGG | + | chr4.4:4780988-4781007 | None:intergenic | 30.0% | |
GTCATTTGTGTGTGTTTATA+CGG | - | chr4.4:4780676-4780695 | MS.gene069595:intron | 30.0% | |
TATTTGTGTCAATTTCCTAC+AGG | - | chr4.4:4780988-4781007 | MS.gene069595:intron | 30.0% | |
TCATTTGTGTGTGTTTATAC+GGG | - | chr4.4:4780677-4780696 | MS.gene069595:intron | 30.0% | |
TGAGAAATTACTTCCAAACT+TGG | + | chr4.4:4778423-4778442 | None:intergenic | 30.0% | |
TGATGAGTAGAAATTTACAG+AGG | - | chr4.4:4779771-4779790 | MS.gene069595:intron | 30.0% | |
TGTAACTGAAATAGTGATGT+AGG | - | chr4.4:4782610-4782629 | MS.gene069595:CDS | 30.0% | |
TGTAAGATCGTTTGAATTGT+AGG | - | chr4.4:4778209-4778228 | MS.gene069595:intron | 30.0% | |
TGTGCATGATATTGAGAATA+TGG | - | chr4.4:4778060-4778079 | MS.gene069595:intron | 30.0% | |
TTAATAAGGATCCCTGAAAA+TGG | + | chr4.4:4780779-4780798 | None:intergenic | 30.0% | |
TTAGCTAGGTGTTTATATTC+AGG | + | chr4.4:4780302-4780321 | None:intergenic | 30.0% | |
TTCTAGTGACAATGTTCATT+TGG | - | chr4.4:4781717-4781736 | MS.gene069595:CDS | 30.0% | |
TTGTTACAAGGTCAAAACAA+TGG | - | chr4.4:4779407-4779426 | MS.gene069595:intron | 30.0% | |
TTTAGAGGACCAAAAATCAA+AGG | - | chr4.4:4782086-4782105 | MS.gene069595:intron | 30.0% | |
TTTGACGAAGATTGATCTAA+TGG | - | chr4.4:4779305-4779324 | MS.gene069595:intron | 30.0% | |
! | AAATCAAAGGAGAATTTTGG+AGG | - | chr4.4:4782099-4782118 | MS.gene069595:intron | 30.0% |
! | AAGATTGATCTAATGGACAA+GGG | - | chr4.4:4779312-4779331 | MS.gene069595:intron | 30.0% |
! | AATATGACACTCCATTTTCA+GGG | - | chr4.4:4780765-4780784 | MS.gene069595:intron | 30.0% |
! | AATATTGATGTGGTGATGAT+TGG | - | chr4.4:4780740-4780759 | MS.gene069595:intron | 30.0% |
! | AATCAAAGGAGAATTTTGGA+GGG | - | chr4.4:4782100-4782119 | MS.gene069595:intron | 30.0% |
! | CGTGAACTTTTGTAAAAAAC+AGG | - | chr4.4:4782042-4782061 | MS.gene069595:intron | 30.0% |
! | CTAATTTACAGCTTTTAGAC+AGG | + | chr4.4:4781404-4781423 | None:intergenic | 30.0% |
! | GCAAGATAAACTTTCTAGAA+TGG | + | chr4.4:4778768-4778787 | None:intergenic | 30.0% |
! | GCAAGCAAAAGTATATATCA+TGG | + | chr4.4:4780143-4780162 | None:intergenic | 30.0% |
! | GCATCATTTGCTGAAATATT+AGG | - | chr4.4:4780383-4780402 | MS.gene069595:CDS | 30.0% |
! | GTTTTGCTTATAATAGTGAC+CGG | + | chr4.4:4783266-4783247 | None:intergenic | 30.0% |
! | TAATATGACACTCCATTTTC+AGG | - | chr4.4:4780764-4780783 | MS.gene069595:intron | 30.0% |
! | TAATCTTTTGCTGATCTCTT+TGG | - | chr4.4:4781498-4781517 | MS.gene069595:intron | 30.0% |
! | TGACAATAAACAATGGACTT+CGG | + | chr4.4:4783406-4783425 | None:intergenic | 30.0% |
! | TGAGATAAAGGGTTTTCTTT+CGG | - | chr4.4:4781869-4781888 | MS.gene069595:intron | 30.0% |
! | TTTTGCTTATAATAGTGACC+CGG | - | chr4.4:4783248-4783267 | MS.gene069595:intron | 30.0% |
!! | AAGTTTTATGAGACTGTTTG+GGG | - | chr4.4:4782330-4782349 | MS.gene069595:intron | 30.0% |
!! | CATGGTTATAGTTTGTTACA+AGG | - | chr4.4:4779395-4779414 | MS.gene069595:intron | 30.0% |
!! | CTAGAAGTGTTTGAGATAAA+GGG | - | chr4.4:4781858-4781877 | MS.gene069595:intron | 30.0% |
!! | GTTGTTTTCAAAAGCTATCT+TGG | + | chr4.4:4782410-4782429 | None:intergenic | 30.0% |
!! | TCTAGAAGTGTTTGAGATAA+AGG | - | chr4.4:4781857-4781876 | MS.gene069595:intron | 30.0% |
!! | TGAAAGTTGGTATACTTAGA+GGG | - | chr4.4:4782131-4782150 | MS.gene069595:intron | 30.0% |
!! | TGTTTTGAATTGATTCTTCC+AGG | - | chr4.4:4781539-4781558 | MS.gene069595:intron | 30.0% |
!! | TTTTTGGTCCTCTAAATTTC+TGG | + | chr4.4:4782082-4782101 | None:intergenic | 30.0% |
!!! | CTGAACTTGGACTTTTTTTA+TGG | + | chr4.4:4778491-4778510 | None:intergenic | 30.0% |
!!! | CTTTTTGCACTGTTGATTTT+TGG | - | chr4.4:4779180-4779199 | MS.gene069595:intron | 30.0% |
AAAAAAATACCTGATCCACG+AGG | + | chr4.4:4777115-4777134 | None:intergenic | 35.0% | |
AAACAAAACCCAGGTTGTAA+AGG | - | chr4.4:4778557-4778576 | MS.gene069595:intron | 35.0% | |
AAACACCTAGCTAACAGAAT+GGG | - | chr4.4:4780308-4780327 | MS.gene069595:intron | 35.0% | |
AAAGCAGTCTCAAACTTGAA+CGG | - | chr4.4:4783076-4783095 | MS.gene069595:CDS | 35.0% | |
AACGCTAAAAGCCAAAGAAA+AGG | + | chr4.4:4779052-4779071 | None:intergenic | 35.0% | |
AACTGCATCTATTTCAGCTT+GGG | + | chr4.4:4783733-4783752 | None:intergenic | 35.0% | |
AATCCACTCTAGTTACAATC+AGG | - | chr4.4:4781186-4781205 | MS.gene069595:intron | 35.0% | |
AATCTTCGTCAAAACTCCAA+TGG | + | chr4.4:4779298-4779317 | None:intergenic | 35.0% | |
AATGCAGGTCAATTGAAATC+AGG | + | chr4.4:4779878-4779897 | None:intergenic | 35.0% | |
AATGTAAAATGAGAAGTCCC+AGG | + | chr4.4:4781622-4781641 | None:intergenic | 35.0% | |
ACAAATGACAAAAGTCTGGA+GGG | + | chr4.4:4780665-4780684 | None:intergenic | 35.0% | |
ACACACAAATGACAAAAGTC+TGG | + | chr4.4:4780669-4780688 | None:intergenic | 35.0% | |
AGAGGAAAATCGTTGAATCA+TGG | + | chr4.4:4778645-4778664 | None:intergenic | 35.0% | |
AGGAAAATCGTTGAATCATG+GGG | + | chr4.4:4778643-4778662 | None:intergenic | 35.0% | |
AGGTCAAAACAATGGAAAAG+GGG | - | chr4.4:4779415-4779434 | MS.gene069595:intron | 35.0% | |
ATATCATGCACAATACTCTC+AGG | + | chr4.4:4778052-4778071 | None:intergenic | 35.0% | |
ATCCACTCTAGTTACAATCA+GGG | - | chr4.4:4781187-4781206 | MS.gene069595:intron | 35.0% | |
ATGAAAATCGTTGAAGAGAC+CGG | + | chr4.4:4778682-4778701 | None:intergenic | 35.0% | |
ATGATATACTATACTCCCTC+CGG | + | chr4.4:4783270-4783289 | None:intergenic | 35.0% | |
ATTCTCTGTTCCAAAACCAT+TGG | - | chr4.4:4780626-4780645 | MS.gene069595:intron | 35.0% | |
ATTGCCAGTAAATGAAAACC+AGG | + | chr4.4:4782781-4782800 | None:intergenic | 35.0% | |
CAAGGTCAAAACAATGGAAA+AGG | - | chr4.4:4779413-4779432 | MS.gene069595:intron | 35.0% | |
CAGATAAGCTCATTAGTCAT+AGG | + | chr4.4:4779736-4779755 | None:intergenic | 35.0% | |
CAGTGAAAAAGTGATCAAGT+AGG | + | chr4.4:4783450-4783469 | None:intergenic | 35.0% | |
CATATAGGTTAAAGTTCCCT+TGG | - | chr4.4:4780183-4780202 | MS.gene069595:CDS | 35.0% | |
CATGTATGTATGGATGGTAA+TGG | - | chr4.4:4777534-4777553 | MS.gene069595:intron | 35.0% | |
CATTACCATCCATACATACA+TGG | + | chr4.4:4777536-4777555 | None:intergenic | 35.0% | |
CCGTACTTGACAATAAACAA+TGG | + | chr4.4:4783413-4783432 | None:intergenic | 35.0% | |
CTATGACTAATGAGCTTATC+TGG | - | chr4.4:4779734-4779753 | MS.gene069595:intron | 35.0% | |
CTTAGCATATATTCTCCCAA+TGG | - | chr4.4:4777657-4777676 | MS.gene069595:CDS | 35.0% | |
GAACATTACCTTCTCAATGT+AGG | + | chr4.4:4778092-4778111 | None:intergenic | 35.0% | |
GAATGAGAGATGAAAGCAAA+AGG | - | chr4.4:4782898-4782917 | MS.gene069595:intron | 35.0% | |
GAGGAAAATCGTTGAATCAT+GGG | + | chr4.4:4778644-4778663 | None:intergenic | 35.0% | |
GATTAAGAAGTTCCCAAGTT+TGG | - | chr4.4:4778407-4778426 | MS.gene069595:intron | 35.0% | |
GTTGCAATATCTTGATTAGC+CGG | + | chr4.4:4778973-4778992 | None:intergenic | 35.0% | |
TAAACACCTAGCTAACAGAA+TGG | - | chr4.4:4780307-4780326 | MS.gene069595:intron | 35.0% | |
TAAGGTTGGGTATCATTCTA+TGG | - | chr4.4:4779701-4779720 | MS.gene069595:intron | 35.0% | |
TATAATCAGGAAACTTGGAG+AGG | + | chr4.4:4783505-4783524 | None:intergenic | 35.0% | |
TATTTGTAGGGATCGTTACT+CGG | - | chr4.4:4777189-4777208 | MS.gene069595:intron | 35.0% | |
TCATAGTTTAATACTCCCTC+CGG | - | chr4.4:4783116-4783135 | MS.gene069595:intron | 35.0% | |
TCTATGCAATTATCATTCGG+TGG | + | chr4.4:4778389-4778408 | None:intergenic | 35.0% | |
TGAGTTGTTTGGGTCAAAAA+CGG | - | chr4.4:4778582-4778601 | MS.gene069595:intron | 35.0% | |
TGTCATCAAAAAAAGTCGCT+TGG | - | chr4.4:4782010-4782029 | MS.gene069595:intron | 35.0% | |
TGTTTCCATGTATGTATGGA+TGG | - | chr4.4:4777528-4777547 | MS.gene069595:intron | 35.0% | |
TTTCACTGAGCTAGGAAAAA+TGG | - | chr4.4:4783462-4783481 | MS.gene069595:CDS | 35.0% | |
TTTGAGAACTTATGTGGTAG+TGG | - | chr4.4:4781291-4781310 | MS.gene069595:intron | 35.0% | |
TTTGTCCTCATTACTGAATG+AGG | - | chr4.4:4783647-4783666 | MS.gene069595:CDS | 35.0% | |
! | AAATCGGTGAATCTTTTCCT+CGG | + | chr4.4:4777284-4777303 | None:intergenic | 35.0% |
! | AGGGACAGTTGAAATTTGTT+TGG | + | chr4.4:4777631-4777650 | None:intergenic | 35.0% |
! | ATCTGACGGTTGATTTCTTT+CGG | - | chr4.4:4782955-4782974 | MS.gene069595:intron | 35.0% |
! | GAAGATTGATCTAATGGACA+AGG | - | chr4.4:4779311-4779330 | MS.gene069595:intron | 35.0% |
! | GAGATAAAGGGTTTTCTTTC+GGG | - | chr4.4:4781870-4781889 | MS.gene069595:intron | 35.0% |
! | GATTCTTATCTAAGGCGAAT+CGG | - | chr4.4:4783041-4783060 | MS.gene069595:CDS | 35.0% |
! | GGCAATTTTCTCATCAATAC+TGG | - | chr4.4:4782795-4782814 | MS.gene069595:CDS | 35.0% |
! | TCTTCAACGATTTTCATGGT+TGG | - | chr4.4:4778685-4778704 | MS.gene069595:intron | 35.0% |
! | TGAAATTTGTTTGGATCGAC+CGG | + | chr4.4:4777622-4777641 | None:intergenic | 35.0% |
! | TGTAAAGGTGTGAGTTGTTT+GGG | - | chr4.4:4778572-4778591 | MS.gene069595:intron | 35.0% |
! | TTGTAAAGGTGTGAGTTGTT+TGG | - | chr4.4:4778571-4778590 | MS.gene069595:intron | 35.0% |
! | TTTTGTAATGCTATGGGCAT+TGG | - | chr4.4:4782639-4782658 | MS.gene069595:CDS | 35.0% |
!! | AATGGACTTTTCACAAGTAC+AGG | + | chr4.4:4782239-4782258 | None:intergenic | 35.0% |
!! | AGTTTTATGAGACTGTTTGG+GGG | - | chr4.4:4782331-4782350 | MS.gene069595:intron | 35.0% |
!! | CTGAAAGTTGGTATACTTAG+AGG | - | chr4.4:4782130-4782149 | MS.gene069595:intron | 35.0% |
!! | GAAAGTTGGTATACTTAGAG+GGG | - | chr4.4:4782132-4782151 | MS.gene069595:intron | 35.0% |
!! | GAAATATTGAAAGTACCGGT+AGG | + | chr4.4:4779030-4779049 | None:intergenic | 35.0% |
!! | TACTGGCTTTGTTTATTCTC+AGG | - | chr4.4:4782812-4782831 | MS.gene069595:intron | 35.0% |
!! | TGGTTTAATTTGTGTAGCTG+CGG | - | chr4.4:4777560-4777579 | MS.gene069595:intron | 35.0% |
!!! | AGGAAAAGATTCACCGATTT+TGG | - | chr4.4:4777284-4777303 | MS.gene069595:CDS | 35.0% |
!!! | TGGACTTTTTTTATGGGACT+CGG | + | chr4.4:4778484-4778503 | None:intergenic | 35.0% |
AAACTTGAACGGACGGTATA+TGG | - | chr4.4:4783087-4783106 | MS.gene069595:CDS | 40.0% | |
AACACCTAGCTAACAGAATG+GGG | - | chr4.4:4780309-4780328 | MS.gene069595:intron | 40.0% | |
AACACTACAACTGGTCGATA+TGG | - | chr4.4:4782923-4782942 | MS.gene069595:intron | 40.0% | |
AACTCACACCTTTACAACCT+GGG | + | chr4.4:4778568-4778587 | None:intergenic | 40.0% | |
ACAACTGCAAGAGTCACAAA+AGG | + | chr4.4:4777861-4777880 | None:intergenic | 40.0% | |
ACATTGTCACTAGAATTCCC+CGG | + | chr4.4:4781712-4781731 | None:intergenic | 40.0% | |
AGCCTTCCATATTGAGGATA+TGG | - | chr4.4:4779851-4779870 | MS.gene069595:intron | 40.0% | |
AGGATCCTCATTCAGTAATG+AGG | + | chr4.4:4783655-4783674 | None:intergenic | 40.0% | |
AGGGTTATGCTATAAACTCG+AGG | + | chr4.4:4780058-4780077 | None:intergenic | 40.0% | |
AGGTTAAAGTTCCCTTGGAT+CGG | - | chr4.4:4780188-4780207 | MS.gene069595:CDS | 40.0% | |
ATAAAGGGATGCACTGAACT+TGG | + | chr4.4:4778504-4778523 | None:intergenic | 40.0% | |
ATGTTGACATGATTGCTGCA+AGG | - | chr4.4:4780246-4780265 | MS.gene069595:intron | 40.0% | |
CAAAAACTGTGGCAAGTTCT+AGG | - | chr4.4:4778851-4778870 | MS.gene069595:intron | 40.0% | |
CAACTGCATCTATTTCAGCT+TGG | + | chr4.4:4783734-4783753 | None:intergenic | 40.0% | |
CACAAATGACAAAAGTCTGG+AGG | + | chr4.4:4780666-4780685 | None:intergenic | 40.0% | |
CCAGGTTCATTCGCTATTAA+AGG | - | chr4.4:4781557-4781576 | MS.gene069595:intron | 40.0% | |
CCTTTAATAGCGAATGAACC+TGG | + | chr4.4:4781560-4781579 | None:intergenic | 40.0% | |
CGAGTCAAAAAACAAAACCC+AGG | - | chr4.4:4778548-4778567 | MS.gene069595:intron | 40.0% | |
CTAATTAGAGACTGAATGCC+TGG | + | chr4.4:4780507-4780526 | None:intergenic | 40.0% | |
CTGAAATAGATGCAGTTGCT+TGG | - | chr4.4:4783736-4783755 | MS.gene069595:CDS | 40.0% | |
GAAGAGAATCCCAAAGAGTA+GGG | + | chr4.4:4777015-4777034 | None:intergenic | 40.0% | |
GAATGAGGATCCTGCAATTA+TGG | - | chr4.4:4783662-4783681 | MS.gene069595:CDS | 40.0% | |
GAGAACAAGCTGACTGAATT+GGG | - | chr4.4:4779202-4779221 | MS.gene069595:intron | 40.0% | |
GATGAAACGGATAGAGAAAC+CGG | - | chr4.4:4777600-4777619 | MS.gene069595:intron | 40.0% | |
GCCTTCCATATTGAGGATAT+GGG | - | chr4.4:4779852-4779871 | MS.gene069595:intron | 40.0% | |
GGGCAAGTTATATGCAATCA+TGG | - | chr4.4:4780841-4780860 | MS.gene069595:intron | 40.0% | |
GGGTTATGCTATAAACTCGA+GGG | + | chr4.4:4780057-4780076 | None:intergenic | 40.0% | |
GGTTATGCTATAAACTCGAG+GGG | + | chr4.4:4780056-4780075 | None:intergenic | 40.0% | |
GTAATCAAGTCCAAGATTCC+AGG | - | chr4.4:4780486-4780505 | MS.gene069595:CDS | 40.0% | |
GTTATGCTATAAACTCGAGG+GGG | + | chr4.4:4780055-4780074 | None:intergenic | 40.0% | |
GTTGAAATGTGCAGAGCTTT+CGG | - | chr4.4:4781771-4781790 | MS.gene069595:intron | 40.0% | |
GTTGAGTTAGTGCTAAGGTT+GGG | - | chr4.4:4779688-4779707 | MS.gene069595:intron | 40.0% | |
GTTTGACAAGCAGCTTTCAA+TGG | - | chr4.4:4781079-4781098 | MS.gene069595:intron | 40.0% | |
TCATTCGCTATTAAAGGACC+TGG | - | chr4.4:4781563-4781582 | MS.gene069595:intron | 40.0% | |
TCCACTCTAGTTACAATCAG+GGG | - | chr4.4:4781188-4781207 | MS.gene069595:intron | 40.0% | |
TGAAGCAATACCCTGGTTTA+CGG | - | chr4.4:4782838-4782857 | MS.gene069595:intron | 40.0% | |
TGACATGTCTTTCCTGTACA+CGG | - | chr4.4:4777941-4777960 | MS.gene069595:intron | 40.0% | |
TGATATACTATACTCCCTCC+GGG | + | chr4.4:4783269-4783288 | None:intergenic | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr4.4:4783134-4783153 | None:intergenic | 40.0% | |
TGGACTTACATCAACAGCAT+CGG | + | chr4.4:4779340-4779359 | None:intergenic | 40.0% | |
TGGGTATCATTCTATGGCAT+TGG | - | chr4.4:4779707-4779726 | MS.gene069595:intron | 40.0% | |
TGTTTATTGTCAAGTACGGG+AGG | - | chr4.4:4783414-4783433 | MS.gene069595:CDS | 40.0% | |
TTGAAATGTGCAGAGCTTTC+GGG | - | chr4.4:4781772-4781791 | MS.gene069595:intron | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr4.4:4783135-4783154 | None:intergenic | 40.0% | |
TTGTGAAGCTGCAAAACAAG+TGG | + | chr4.4:4777218-4777237 | None:intergenic | 40.0% | |
! | ACTTTTGCTTGCTCAGATGT+TGG | - | chr4.4:4780151-4780170 | MS.gene069595:CDS | 40.0% |
! | ATAGCCTTAAAACCGTGTAC+AGG | + | chr4.4:4777956-4777975 | None:intergenic | 40.0% |
! | CAACGATTTTCATGGTTGGA+GGG | - | chr4.4:4778689-4778708 | MS.gene069595:intron | 40.0% |
! | CTTTCCTGTACACGGTTTTA+AGG | - | chr4.4:4777949-4777968 | MS.gene069595:intron | 40.0% |
! | CTTTTAGGCGAAAGAACCAT+TGG | - | chr4.4:4779279-4779298 | MS.gene069595:intron | 40.0% |
! | GACAAGGTAACCAATGGTTT+TGG | + | chr4.4:4780639-4780658 | None:intergenic | 40.0% |
! | GCAGCCGAACTGTATAATTT+TGG | - | chr4.4:4778939-4778958 | MS.gene069595:intron | 40.0% |
! | GGTCTCTTCAACGATTTTCA+TGG | - | chr4.4:4778681-4778700 | MS.gene069595:intron | 40.0% |
! | GGTCTGCAAAGAGTATATAC+AGG | + | chr4.4:4783622-4783641 | None:intergenic | 40.0% |
! | TCAACGATTTTCATGGTTGG+AGG | - | chr4.4:4778688-4778707 | MS.gene069595:intron | 40.0% |
! | TGCAATTATCATTCGGTGGT+AGG | + | chr4.4:4778385-4778404 | None:intergenic | 40.0% |
! | TTCTGGAAAATCCTCCGTAT+TGG | - | chr4.4:4777063-4777082 | MS.gene069595:intron | 40.0% |
!! | ACTGTTAGCCTTCCATATTG+AGG | - | chr4.4:4779845-4779864 | MS.gene069595:intron | 40.0% |
!! | AGCAAGGATTAATCGGTTTG+AGG | + | chr4.4:4780030-4780049 | None:intergenic | 40.0% |
!! | AGCATACTGCTTTTCGTACA+TGG | + | chr4.4:4778902-4778921 | None:intergenic | 40.0% |
!! | AGTACAGAAGCATCATCTTG+TGG | - | chr4.4:4777791-4777810 | MS.gene069595:CDS | 40.0% |
!! | GCATACTGCTTTTCGTACAT+GGG | + | chr4.4:4778901-4778920 | None:intergenic | 40.0% |
!! | GGAACCTGGTTTTCATTTAC+TGG | - | chr4.4:4782774-4782793 | MS.gene069595:CDS | 40.0% |
!! | TGTATGGATGGTAATGGTGA+TGG | - | chr4.4:4777540-4777559 | MS.gene069595:intron | 40.0% |
!! | TTAGACAGGGTTGATGTTTG+AGG | + | chr4.4:4781390-4781409 | None:intergenic | 40.0% |
!!! | ACTTTTTTTATGGGACTCGG+TGG | + | chr4.4:4778481-4778500 | None:intergenic | 40.0% |
!!! | CTTTTTTTATGGGACTCGGT+GGG | + | chr4.4:4778480-4778499 | None:intergenic | 40.0% |
!!! | GATCACTTTTTCACTGAGCT+AGG | - | chr4.4:4783454-4783473 | MS.gene069595:CDS | 40.0% |
!!! | TTTTTTTATGGGACTCGGTG+GGG | + | chr4.4:4778479-4778498 | None:intergenic | 40.0% |
AAAGTCTGGAGGGAAAGACA+AGG | + | chr4.4:4780655-4780674 | None:intergenic | 45.0% | |
ACAACTCCAGTCTCTTTGCA+AGG | + | chr4.4:4783701-4783720 | None:intergenic | 45.0% | |
ACACATACACGCCATCAAGA+TGG | + | chr4.4:4780901-4780920 | None:intergenic | 45.0% | |
AGACTGAATGCCTGGAATCT+TGG | + | chr4.4:4780499-4780518 | None:intergenic | 45.0% | |
AGACTGTTTGGGGGAACATA+TGG | - | chr4.4:4782340-4782359 | MS.gene069595:intron | 45.0% | |
CAAAAGGGCAACACTACAAC+TGG | - | chr4.4:4782914-4782933 | MS.gene069595:intron | 45.0% | |
CAAAGCTGTTAGTGAGACTC+TGG | - | chr4.4:4781590-4781609 | MS.gene069595:intron | 45.0% | |
CAACTCACACCTTTACAACC+TGG | + | chr4.4:4778569-4778588 | None:intergenic | 45.0% | |
CAATCTCACTCTGCGTATTC+AGG | - | chr4.4:4783325-4783344 | MS.gene069595:intron | 45.0% | |
CACTGAGCTAGGAAAAATGG+AGG | - | chr4.4:4783465-4783484 | MS.gene069595:CDS | 45.0% | |
CAGCTTCACAAGAGTGATGA+GGG | - | chr4.4:4777227-4777246 | MS.gene069595:CDS | 45.0% | |
CAGTAATGAGGACAAACGCT+TGG | + | chr4.4:4783643-4783662 | None:intergenic | 45.0% | |
CAGTCTCAAACTTGAACGGA+CGG | - | chr4.4:4783080-4783099 | MS.gene069595:CDS | 45.0% | |
CATCTTATTGCTCCAGAGCA+AGG | - | chr4.4:4781146-4781165 | MS.gene069595:intron | 45.0% | |
CCTTAGCACTAACTCAACCA+AGG | + | chr4.4:4779686-4779705 | None:intergenic | 45.0% | |
CCTTGGTTGAGTTAGTGCTA+AGG | - | chr4.4:4779683-4779702 | MS.gene069595:intron | 45.0% | |
CTACGACGTTCCATAATTGC+AGG | + | chr4.4:4783675-4783694 | None:intergenic | 45.0% | |
CTATTTCAGCTTGGGCACTT+CGG | + | chr4.4:4783725-4783744 | None:intergenic | 45.0% | |
CTGGAGCAATAAGATGAGGT+TGG | + | chr4.4:4781142-4781161 | None:intergenic | 45.0% | |
CTTCCTCAAGATGTGGACAA+GGG | - | chr4.4:4782981-4783000 | MS.gene069595:intron | 45.0% | |
GAACAGATTTAGGCCCTGTT+TGG | + | chr4.4:4782560-4782579 | None:intergenic | 45.0% | |
GAAGCAATACCCTGGTTTAC+GGG | - | chr4.4:4782839-4782858 | MS.gene069595:intron | 45.0% | |
GAGGGACGAAAACTGAAAGT+TGG | - | chr4.4:4782118-4782137 | MS.gene069595:intron | 45.0% | |
GATTTCTTACCTCGTGGATC+AGG | - | chr4.4:4777103-4777122 | MS.gene069595:intron | 45.0% | |
GCAATTATGGAACGTCGTAG+TGG | - | chr4.4:4783675-4783694 | MS.gene069595:CDS | 45.0% | |
GCCCATATCCTCAATATGGA+AGG | + | chr4.4:4779856-4779875 | None:intergenic | 45.0% | |
GCTTATAATAGTGACCCGGA+GGG | - | chr4.4:4783252-4783271 | MS.gene069595:intron | 45.0% | |
GGAAGAGAATCCCAAAGAGT+AGG | + | chr4.4:4777016-4777035 | None:intergenic | 45.0% | |
GGAGAACAAGCTGACTGAAT+TGG | - | chr4.4:4779201-4779220 | MS.gene069595:intron | 45.0% | |
GGCAAAGATTTCTTACCTCG+TGG | - | chr4.4:4777097-4777116 | MS.gene069595:intron | 45.0% | |
GGGAAAGACAAGGTAACCAA+TGG | + | chr4.4:4780645-4780664 | None:intergenic | 45.0% | |
GGTCAAAAACGGTTCACCAT+GGG | - | chr4.4:4778593-4778612 | MS.gene069595:intron | 45.0% | |
GGTTGAGTTAGTGCTAAGGT+TGG | - | chr4.4:4779687-4779706 | MS.gene069595:intron | 45.0% | |
TAGTGCACTCCCTACTCTTT+GGG | - | chr4.4:4777003-4777022 | MS.gene069595:CDS | 45.0% | |
TATGGAGTCTGGCTATCTGA+CGG | - | chr4.4:4782941-4782960 | MS.gene069595:intron | 45.0% | |
TCAGGCCCATATCCTCAATA+TGG | + | chr4.4:4779860-4779879 | None:intergenic | 45.0% | |
TGACACTCATCGATCTTCCT+GGG | - | chr4.4:4777886-4777905 | MS.gene069595:intron | 45.0% | |
TGCTTATAATAGTGACCCGG+AGG | - | chr4.4:4783251-4783270 | MS.gene069595:intron | 45.0% | |
TGCTTGCTCAGATGTTGGAA+GGG | - | chr4.4:4780156-4780175 | MS.gene069595:CDS | 45.0% | |
TGTTCACAACACCGATCCAA+GGG | + | chr4.4:4780202-4780221 | None:intergenic | 45.0% | |
TTCTTGCAGTTCTTCTGCAC+AGG | - | chr4.4:4782702-4782721 | MS.gene069595:intron | 45.0% | |
TTGACACTCATCGATCTTCC+TGG | - | chr4.4:4777885-4777904 | MS.gene069595:intron | 45.0% | |
TTGCTTGCTCAGATGTTGGA+AGG | - | chr4.4:4780155-4780174 | MS.gene069595:CDS | 45.0% | |
! | ATAACTTGCCCTGCATGTGA+TGG | + | chr4.4:4780832-4780851 | None:intergenic | 45.0% |
! | CACTAACAGCTTTGTGAACC+AGG | + | chr4.4:4781584-4781603 | None:intergenic | 45.0% |
! | CAGGATTTGAAGCAATACCC+TGG | - | chr4.4:4782831-4782850 | MS.gene069595:intron | 45.0% |
! | GAGTGGATTCAATGAGACGA+CGG | + | chr4.4:4781175-4781194 | None:intergenic | 45.0% |
! | TAATTTGTGTAGCTGCGGTG+AGG | - | chr4.4:4777565-4777584 | MS.gene069595:intron | 45.0% |
! | TGTTGGAAGGGAGAGCATAT+AGG | - | chr4.4:4780168-4780187 | MS.gene069595:CDS | 45.0% |
!! | GAGAACTTATGTGGTAGTGG+TGG | - | chr4.4:4781294-4781313 | MS.gene069595:intron | 45.0% |
!! | TCCGTATTGGAGAGTGTTGT+CGG | - | chr4.4:4777076-4777095 | MS.gene069595:intron | 45.0% |
!! | TCTCTAGTGTTGGTTTCCCA+TGG | + | chr4.4:4778612-4778631 | None:intergenic | 45.0% |
!! | TGAGACTCTGGTTTGTTCCT+GGG | - | chr4.4:4781602-4781621 | MS.gene069595:intron | 45.0% |
!! | TGCTCTGGAGCAATAAGATG+AGG | + | chr4.4:4781146-4781165 | None:intergenic | 45.0% |
!!! | TGGGCATTGGCAATGACTTT+TGG | - | chr4.4:4782652-4782671 | MS.gene069595:intron | 45.0% |
AATCGTTGAAGAGACCGGAG+TGG | + | chr4.4:4778677-4778696 | None:intergenic | 50.0% | |
ACTGCTTTGCCATCACATGC+AGG | - | chr4.4:4780820-4780839 | MS.gene069595:intron | 50.0% | |
AGATTCACCGTGGTCACCTA+AGG | + | chr4.4:4776984-4777003 | None:intergenic | 50.0% | |
CAACTGGTCGATATGGAGTC+TGG | - | chr4.4:4782930-4782949 | MS.gene069595:intron | 50.0% | |
CAGACCCCATTCTGTTAGCT+AGG | + | chr4.4:4780316-4780335 | None:intergenic | 50.0% | |
CTAGTGCACTCCCTACTCTT+TGG | - | chr4.4:4777002-4777021 | MS.gene069595:CDS | 50.0% | |
CTGAGTTTCTTCACCTTCCG+AGG | - | chr4.4:4777264-4777283 | MS.gene069595:CDS | 50.0% | |
CTGCTTTGCCATCACATGCA+GGG | - | chr4.4:4780821-4780840 | MS.gene069595:intron | 50.0% | |
CTGTTCACAACACCGATCCA+AGG | + | chr4.4:4780203-4780222 | None:intergenic | 50.0% | |
CTTTCCCAAACGAGCCAGTT+CGG | + | chr4.4:4780553-4780572 | None:intergenic | 50.0% | |
GACAACACTCTCCAATACGG+AGG | + | chr4.4:4777077-4777096 | None:intergenic | 50.0% | |
GCAATGAAACAGCAGACCAG+AGG | + | chr4.4:4782678-4782697 | None:intergenic | 50.0% | |
GCAGCTTCACAAGAGTGATG+AGG | - | chr4.4:4777226-4777245 | MS.gene069595:CDS | 50.0% | |
GCCCCTGATTGTAACTAGAG+TGG | + | chr4.4:4781192-4781211 | None:intergenic | 50.0% | |
GCCGACAACACTCTCCAATA+CGG | + | chr4.4:4777080-4777099 | None:intergenic | 50.0% | |
GCTTCCTCAAGATGTGGACA+AGG | - | chr4.4:4782980-4782999 | MS.gene069595:intron | 50.0% | |
GGGGGTGAGCAAGGATTAAT+CGG | + | chr4.4:4780037-4780056 | None:intergenic | 50.0% | |
GGGTCAAAAACGGTTCACCA+TGG | - | chr4.4:4778592-4778611 | MS.gene069595:intron | 50.0% | |
GGTTCGCTCCTACATTGAGA+AGG | - | chr4.4:4778081-4778100 | MS.gene069595:intron | 50.0% | |
TACCGGTAGGATCCACTTCA+CGG | + | chr4.4:4779017-4779036 | None:intergenic | 50.0% | |
TCAATTTCCTACAGGCGACC+TGG | - | chr4.4:4780996-4781015 | MS.gene069595:intron | 50.0% | |
TCGGAAGCTTCCTCAAGATG+TGG | - | chr4.4:4782974-4782993 | MS.gene069595:intron | 50.0% | |
TCTGGCGAAGATGCTCTCAA+AGG | - | chr4.4:4780340-4780359 | MS.gene069595:CDS | 50.0% | |
! | AACCAAGGAGCCTGACTTGA+TGG | + | chr4.4:4779671-4779690 | None:intergenic | 50.0% |
! | CGGAGGATTTTCCAGAACTC+TGG | + | chr4.4:4777060-4777079 | None:intergenic | 50.0% |
! | CGGTGAATCTTTTCCTCGGA+AGG | + | chr4.4:4777280-4777299 | None:intergenic | 50.0% |
! | GCAACCTTTTCAGAGCAGCA+GGG | + | chr4.4:4781058-4781077 | None:intergenic | 50.0% |
! | GGCAGCGTTTTCTCTAGTGT+TGG | + | chr4.4:4778622-4778641 | None:intergenic | 50.0% |
! | TAGTGGCCTTGCAAAGAGAC+TGG | - | chr4.4:4783692-4783711 | MS.gene069595:CDS | 50.0% |
! | TGCAACCTTTTCAGAGCAGC+AGG | + | chr4.4:4781059-4781078 | None:intergenic | 50.0% |
! | TGCTGGTGCTCTTATTTCGC+CGG | - | chr4.4:4781690-4781709 | MS.gene069595:CDS | 50.0% |
! | TGGCAATGACTTTTGGCCTC+TGG | - | chr4.4:4782659-4782678 | MS.gene069595:intron | 50.0% |
!! | GAAACCGAACTGGCTCGTTT+GGG | - | chr4.4:4780546-4780565 | MS.gene069595:intron | 50.0% |
!! | GTGAGACTCTGGTTTGTTCC+TGG | - | chr4.4:4781601-4781620 | MS.gene069595:intron | 50.0% |
!! | TGAAACCGAACTGGCTCGTT+TGG | - | chr4.4:4780545-4780564 | MS.gene069595:intron | 50.0% |
AAGCCTGTTGCAGCTGATGC+TGG | - | chr4.4:4780570-4780589 | MS.gene069595:intron | 55.0% | |
ACCGGTAGGATCCACTTCAC+GGG | + | chr4.4:4779016-4779035 | None:intergenic | 55.0% | |
AGAACTCTGGCCACCAACGA+CGG | + | chr4.4:4777047-4777066 | None:intergenic | 55.0% | |
AGACGACGGTATCCTTGCTC+TGG | + | chr4.4:4781161-4781180 | None:intergenic | 55.0% | |
AGCCTGTTGCAGCTGATGCT+GGG | - | chr4.4:4780571-4780590 | MS.gene069595:intron | 55.0% | |
ATTTCCTACAGGCGACCTGG+AGG | - | chr4.4:4780999-4781018 | MS.gene069595:intron | 55.0% | |
CAAAGAGCTTGCACCGCCTT+AGG | - | chr4.4:4776965-4776984 | MS.gene069595:CDS | 55.0% | |
CAACCTCAGCCCGTAAACCA+GGG | + | chr4.4:4782851-4782870 | None:intergenic | 55.0% | |
CAGAATGGGGTCTGAGCATC+TGG | - | chr4.4:4780322-4780341 | MS.gene069595:intron | 55.0% | |
CCACCCTTGTCCACATCTTG+AGG | + | chr4.4:4782987-4783006 | None:intergenic | 55.0% | |
CCTCAAGATGTGGACAAGGG+TGG | - | chr4.4:4782984-4783003 | MS.gene069595:intron | 55.0% | |
CGATCTTCCTGGGCTTACGA+AGG | - | chr4.4:4777896-4777915 | MS.gene069595:intron | 55.0% | |
CTAAGGCGGTGCAAGCTCTT+TGG | + | chr4.4:4776967-4776986 | None:intergenic | 55.0% | |
CTCCATCAAGTCAGGCTCCT+TGG | - | chr4.4:4779666-4779685 | MS.gene069595:CDS | 55.0% | |
GGAGTGCACTAGATTCACCG+TGG | + | chr4.4:4776994-4777013 | None:intergenic | 55.0% | |
TAAACTCGAGGGGGTGAGCA+AGG | + | chr4.4:4780046-4780065 | None:intergenic | 55.0% | |
TCATCCGCCTCCATCAAGTC+AGG | - | chr4.4:4779658-4779677 | MS.gene069595:CDS | 55.0% | |
TCCCGTGAAGTGGATCCTAC+CGG | - | chr4.4:4779012-4779031 | MS.gene069595:intron | 55.0% | |
TTCACCGTGGTCACCTAAGG+CGG | + | chr4.4:4776981-4777000 | None:intergenic | 55.0% | |
TTGTGTAGCTGCGGTGAGGA+AGG | - | chr4.4:4777569-4777588 | MS.gene069595:intron | 55.0% | |
! | ATACCCTGGTTTACGGGCTG+AGG | - | chr4.4:4782845-4782864 | MS.gene069595:intron | 55.0% |
! | CAAGGAGCCTGACTTGATGG+AGG | + | chr4.4:4779668-4779687 | None:intergenic | 55.0% |
! | CTGGTGCTCTTATTTCGCCG+GGG | - | chr4.4:4781692-4781711 | MS.gene069595:CDS | 55.0% |
! | CTGGTTTACGGGCTGAGGTT+GGG | - | chr4.4:4782850-4782869 | MS.gene069595:intron | 55.0% |
! | GCTGGTGCTCTTATTTCGCC+GGG | - | chr4.4:4781691-4781710 | MS.gene069595:CDS | 55.0% |
! | TGGTTTACGGGCTGAGGTTG+GGG | - | chr4.4:4782851-4782870 | MS.gene069595:intron | 55.0% |
! | TTTTCAGAGCAGCAGGGAGC+TGG | + | chr4.4:4781052-4781071 | None:intergenic | 55.0% |
!! | AGCTCCCTGCTGCTCTGAAA+AGG | - | chr4.4:4781051-4781070 | MS.gene069595:intron | 55.0% |
ACAGCGACCTTCGTAAGCCC+AGG | + | chr4.4:4777906-4777925 | None:intergenic | 60.0% | |
ACCCCAGCATCAGCTGCAAC+AGG | + | chr4.4:4780576-4780595 | None:intergenic | 60.0% | |
ATCACCTCCAGGTCGCCTGT+AGG | + | chr4.4:4781006-4781025 | None:intergenic | 60.0% | |
CCAACCTCAGCCCGTAAACC+AGG | + | chr4.4:4782852-4782871 | None:intergenic | 60.0% | |
CCTCTGCGTGCTTACCACTC+CGG | - | chr4.4:4778660-4778679 | MS.gene069595:intron | 60.0% | |
CTTCCTGCTATCGCCGTCGT+TGG | - | chr4.4:4777031-4777050 | MS.gene069595:CDS | 60.0% | |
GCCTGTTGCAGCTGATGCTG+GGG | - | chr4.4:4780572-4780591 | MS.gene069595:intron | 60.0% | |
GGGCTTACGAAGGTCGCTGT+AGG | - | chr4.4:4777906-4777925 | MS.gene069595:intron | 60.0% | |
TGCACCGCCTTAGGTGACCA+CGG | - | chr4.4:4776974-4776993 | MS.gene069595:CDS | 60.0% | |
! | CCTGGTTTACGGGCTGAGGT+TGG | - | chr4.4:4782849-4782868 | MS.gene069595:intron | 60.0% |
! | GGAGCCTGACTTGATGGAGG+CGG | + | chr4.4:4779665-4779684 | None:intergenic | 60.0% |
!! | GTCGTTGGTGGCCAGAGTTC+TGG | - | chr4.4:4777046-4777065 | MS.gene069595:intron | 60.0% |
CCACCAACGACGGCGATAGC+AGG | + | chr4.4:4777037-4777056 | None:intergenic | 65.0% | |
CCGGAGTGGTAAGCACGCAG+AGG | + | chr4.4:4778663-4778682 | None:intergenic | 65.0% | |
CCTGCTATCGCCGTCGTTGG+TGG | - | chr4.4:4777034-4777053 | MS.gene069595:CDS | 65.0% | |
TACAATCAGGGGCCCTGCCG+AGG | - | chr4.4:4781199-4781218 | MS.gene069595:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 4776932 | 4783767 | 4776932 | ID=MS.gene069595 |
chr4.4 | mRNA | 4776932 | 4783767 | 4776932 | ID=MS.gene069595.t1;Parent=MS.gene069595 |
chr4.4 | exon | 4783575 | 4783767 | 4783575 | ID=MS.gene069595.t1.exon1;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4783575 | 4783767 | 4783575 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4783394 | 4783501 | 4783394 | ID=MS.gene069595.t1.exon2;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4783394 | 4783501 | 4783394 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4783021 | 4783122 | 4783021 | ID=MS.gene069595.t1.exon3;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4783021 | 4783122 | 4783021 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4782772 | 4782822 | 4782772 | ID=MS.gene069595.t1.exon4;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4782772 | 4782822 | 4782772 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4782597 | 4782658 | 4782597 | ID=MS.gene069595.t1.exon5;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4782597 | 4782658 | 4782597 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4781666 | 4781756 | 4781666 | ID=MS.gene069595.t1.exon6;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4781666 | 4781756 | 4781666 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4781349 | 4781413 | 4781349 | ID=MS.gene069595.t1.exon7;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4781349 | 4781413 | 4781349 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4780338 | 4780532 | 4780338 | ID=MS.gene069595.t1.exon8;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4780338 | 4780532 | 4780338 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4780106 | 4780225 | 4780106 | ID=MS.gene069595.t1.exon9;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4780106 | 4780225 | 4780106 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4779787 | 4779857 | 4779787 | ID=MS.gene069595.t1.exon10;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4779787 | 4779857 | 4779787 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4779464 | 4779689 | 4779464 | ID=MS.gene069595.t1.exon11;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4779464 | 4779689 | 4779464 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4779088 | 4779138 | 4779088 | ID=MS.gene069595.t1.exon12;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4779088 | 4779138 | 4779088 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4777637 | 4777865 | 4777637 | ID=MS.gene069595.t1.exon13;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4777637 | 4777865 | 4777637 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4777213 | 4777352 | 4777213 | ID=MS.gene069595.t1.exon14;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4777213 | 4777352 | 4777213 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
chr4.4 | exon | 4776932 | 4777060 | 4776932 | ID=MS.gene069595.t1.exon15;Parent=MS.gene069595.t1 |
chr4.4 | CDS | 4776932 | 4777060 | 4776932 | ID=cds.MS.gene069595.t1;Parent=MS.gene069595.t1 |
Gene Sequence |
Protein sequence |