Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070489.t1 | XP_003616932.3 | 100 | 248 | 0 | 0 | 1 | 248 | 65 | 312 | 3.80E-138 | 500.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070489.t1 | P46608 | 68.2 | 255 | 69 | 6 | 1 | 247 | 129 | 379 | 3.0e-91 | 336.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070489.t1 | D4NXR4 | 100.0 | 248 | 0 | 0 | 1 | 248 | 51 | 298 | 2.7e-138 | 500.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070489.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene070489 | 0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene050298 | MS.gene070489 | 0.806242 | 9.05E-50 | -1.69E-46 |
| MS.gene050563 | MS.gene070489 | 0.897679 | 1.11E-76 | -1.69E-46 |
| MS.gene050584 | MS.gene070489 | 0.835956 | 1.24E-56 | -1.69E-46 |
| MS.gene050585 | MS.gene070489 | 0.841277 | 5.24E-58 | -1.69E-46 |
| MS.gene050587 | MS.gene070489 | 0.825982 | 3.48E-54 | -1.69E-46 |
| MS.gene051789 | MS.gene070489 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene052142 | MS.gene070489 | 0.839621 | 1.42E-57 | -1.69E-46 |
| MS.gene052698 | MS.gene070489 | 0.845959 | 2.93E-59 | -1.69E-46 |
| MS.gene053383 | MS.gene070489 | 0.899129 | 2.69E-77 | -1.69E-46 |
| MS.gene053563 | MS.gene070489 | 0.816285 | 5.98E-52 | -1.69E-46 |
| MS.gene05456 | MS.gene070489 | 0.888281 | 6.79E-73 | -1.69E-46 |
| MS.gene055359 | MS.gene070489 | 0.870412 | 1.49E-66 | -1.69E-46 |
| MS.gene056005 | MS.gene070489 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene057022 | MS.gene070489 | 0.811636 | 6.34E-51 | -1.69E-46 |
| MS.gene058918 | MS.gene070489 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene059006 | MS.gene070489 | 0.858562 | 7.56E-63 | -1.69E-46 |
| MS.gene059768 | MS.gene070489 | 0.854118 | 1.52E-61 | -1.69E-46 |
| MS.gene060513 | MS.gene070489 | 0.812683 | 3.75E-51 | -1.69E-46 |
| MS.gene060691 | MS.gene070489 | 0.847825 | 9.05E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070489.t1 | MTR_5g085860 | 100.000 | 248 | 0 | 0 | 1 | 248 | 51 | 298 | 0.0 | 520 |
| MS.gene070489.t1 | MTR_2g024390 | 65.873 | 252 | 71 | 4 | 1 | 242 | 122 | 368 | 3.18e-108 | 317 |
| MS.gene070489.t1 | MTR_5g033720 | 54.274 | 234 | 92 | 4 | 2 | 225 | 78 | 306 | 1.16e-76 | 234 |
| MS.gene070489.t1 | MTR_1g017080 | 55.508 | 236 | 91 | 3 | 1 | 226 | 124 | 355 | 5.22e-75 | 233 |
| MS.gene070489.t1 | MTR_1g084060 | 49.590 | 244 | 98 | 4 | 2 | 228 | 25 | 260 | 1.50e-72 | 223 |
| MS.gene070489.t1 | MTR_1g084060 | 49.590 | 244 | 98 | 4 | 2 | 228 | 25 | 260 | 3.31e-72 | 223 |
| MS.gene070489.t1 | MTR_2g461240 | 30.894 | 246 | 132 | 4 | 1 | 213 | 99 | 339 | 5.22e-34 | 125 |
| MS.gene070489.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 8.97e-34 | 125 |
| MS.gene070489.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 9.23e-34 | 125 |
| MS.gene070489.t1 | MTR_1g012960 | 31.276 | 243 | 137 | 4 | 1 | 213 | 178 | 420 | 9.70e-34 | 126 |
| MS.gene070489.t1 | MTR_3g106400 | 29.388 | 245 | 141 | 4 | 1 | 213 | 111 | 355 | 1.83e-33 | 125 |
| MS.gene070489.t1 | MTR_5g011070 | 31.967 | 244 | 134 | 5 | 2 | 213 | 33 | 276 | 3.04e-32 | 120 |
| MS.gene070489.t1 | MTR_4g116545 | 31.600 | 250 | 125 | 8 | 1 | 213 | 75 | 315 | 1.27e-29 | 113 |
| MS.gene070489.t1 | MTR_4g116545 | 31.600 | 250 | 125 | 8 | 1 | 213 | 75 | 315 | 1.30e-29 | 114 |
| MS.gene070489.t1 | MTR_8g078480 | 39.394 | 99 | 53 | 4 | 126 | 219 | 546 | 642 | 3.65e-12 | 66.2 |
| MS.gene070489.t1 | MTR_5g018860 | 39.362 | 94 | 51 | 3 | 126 | 215 | 494 | 585 | 4.87e-12 | 65.9 |
| MS.gene070489.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 111 | 215 | 302 | 406 | 5.81e-11 | 62.4 |
| MS.gene070489.t1 | MTR_3g112300 | 35.135 | 111 | 60 | 3 | 111 | 215 | 302 | 406 | 8.94e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070489.t1 | AT1G62360 | 66.148 | 257 | 69 | 4 | 1 | 244 | 126 | 377 | 4.06e-107 | 315 |
| MS.gene070489.t1 | AT4G08150 | 55.187 | 241 | 93 | 3 | 1 | 229 | 139 | 376 | 6.37e-77 | 238 |
| MS.gene070489.t1 | AT1G23380 | 52.361 | 233 | 100 | 4 | 3 | 228 | 92 | 320 | 2.80e-74 | 229 |
| MS.gene070489.t1 | AT1G70510 | 51.064 | 235 | 102 | 3 | 2 | 228 | 75 | 304 | 1.28e-73 | 227 |
| MS.gene070489.t1 | AT1G23380 | 51.915 | 235 | 100 | 5 | 3 | 228 | 92 | 322 | 2.89e-72 | 224 |
| MS.gene070489.t1 | AT1G70510 | 50.209 | 239 | 102 | 4 | 2 | 228 | 75 | 308 | 2.32e-71 | 221 |
| MS.gene070489.t1 | AT5G25220 | 30.833 | 240 | 139 | 5 | 1 | 213 | 164 | 403 | 1.63e-35 | 131 |
| MS.gene070489.t1 | AT5G25220 | 30.833 | 240 | 139 | 5 | 1 | 213 | 164 | 403 | 2.06e-35 | 130 |
| MS.gene070489.t1 | AT5G11060 | 35.366 | 246 | 120 | 9 | 1 | 213 | 128 | 367 | 6.57e-35 | 129 |
| MS.gene070489.t1 | AT1G62990 | 30.081 | 246 | 133 | 5 | 2 | 213 | 35 | 275 | 8.23e-34 | 124 |
| MS.gene070489.t1 | AT4G32040 | 27.935 | 247 | 137 | 6 | 1 | 213 | 123 | 362 | 2.04e-29 | 114 |
| MS.gene070489.t1 | AT4G32040 | 27.935 | 247 | 137 | 6 | 1 | 213 | 123 | 362 | 2.27e-29 | 114 |
| MS.gene070489.t1 | AT4G36870 | 37.234 | 94 | 53 | 3 | 126 | 215 | 468 | 559 | 1.89e-11 | 63.9 |
| MS.gene070489.t1 | AT4G36870 | 37.234 | 94 | 53 | 3 | 126 | 215 | 468 | 559 | 1.89e-11 | 63.9 |
| MS.gene070489.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene070489.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene070489.t1 | AT2G23760 | 37.234 | 94 | 53 | 3 | 126 | 215 | 394 | 485 | 2.63e-11 | 63.5 |
| MS.gene070489.t1 | AT2G27990 | 50.909 | 55 | 27 | 0 | 161 | 215 | 431 | 485 | 8.06e-11 | 62.0 |
| MS.gene070489.t1 | AT1G14760 | 33.962 | 106 | 57 | 3 | 2 | 102 | 39 | 136 | 8.08e-11 | 58.9 |
| MS.gene070489.t1 | AT5G41410 | 40.698 | 86 | 43 | 2 | 161 | 240 | 398 | 481 | 8.34e-11 | 62.0 |
Find 54 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCAAGTGCTTGCTTT+TGG | 0.251155 | 5.4:+67900011 | None:intergenic |
| TGTTGATCTGCTTCAAATCT+AGG | 0.290613 | 5.4:+67899981 | None:intergenic |
| GAAATATTGAATGGCTCTTC+AGG | 0.317305 | 5.4:-67903336 | MS.gene070489:CDS |
| CTCTTACCTCAATTGCTTGA+AGG | 0.355056 | 5.4:-67903717 | MS.gene070489:intron |
| TCTAAGCTAGCCACCACTTC+AGG | 0.359706 | 5.4:+67903378 | None:intergenic |
| CTTCACCTTGAGTAGTATCT+AGG | 0.374756 | 5.4:+67901023 | None:intergenic |
| TCCAGGTTTGGATCAGTTCA+TGG | 0.403203 | 5.4:-67903277 | MS.gene070489:CDS |
| TGAAGTGGTGGCTAGCTTAG+AGG | 0.404107 | 5.4:-67903376 | MS.gene070489:CDS |
| GAAAAGCATGGCTTCTTTGA+AGG | 0.406625 | 5.4:+67903206 | None:intergenic |
| CGCAAGTATAGTGGATATCT+AGG | 0.434219 | 5.4:-67900974 | MS.gene070489:CDS |
| TACTACTCAAGGTGAAGATC+AGG | 0.439850 | 5.4:-67901017 | MS.gene070489:CDS |
| AGTTGCTGTCGAGCTTCCTT+TGG | 0.440818 | 5.4:+67900905 | None:intergenic |
| GGCATAGCATCCATAGGAAA+TGG | 0.441925 | 5.4:+67899854 | None:intergenic |
| CTCGACAGCAACTACTTGAT+TGG | 0.448986 | 5.4:-67900895 | MS.gene070489:CDS |
| TATAGGTGAAGATCCAGGTT+TGG | 0.460482 | 5.4:-67903289 | MS.gene070489:CDS |
| GGAAGTAGTAGTTCTTGTAT+AGG | 0.474614 | 5.4:-67903306 | MS.gene070489:CDS |
| AACTACTTGATTGGTGGAGC+AGG | 0.476464 | 5.4:-67900886 | MS.gene070489:CDS |
| ATTTGAAGCAGATCAACAAT+TGG | 0.483386 | 5.4:-67899976 | MS.gene070489:CDS |
| TCAGGACCTTCAAGCAATTG+AGG | 0.486076 | 5.4:+67903711 | None:intergenic |
| GTTGCTGTTTCAACTGACTT+TGG | 0.488737 | 5.4:-67903153 | MS.gene070489:intron |
| CAGCTTCTACGCAAGTATAG+TGG | 0.489736 | 5.4:-67900983 | MS.gene070489:CDS |
| AAAAGCATGGCTTCTTTGAA+GGG | 0.505700 | 5.4:+67903207 | None:intergenic |
| GGATATGCAATTTGCTGTGA+TGG | 0.523714 | 5.4:-67899915 | MS.gene070489:CDS |
| GCTGAGACTCAATTCTTGAA+AGG | 0.524479 | 5.4:+67903184 | None:intergenic |
| GGTGGAGCAGGCATTACAAA+TGG | 0.526535 | 5.4:-67900874 | MS.gene070489:CDS |
| TCCATGAACTGATCCAAACC+TGG | 0.528067 | 5.4:+67903276 | None:intergenic |
| GACAGCAACTACTTGATTGG+TGG | 0.536393 | 5.4:-67900892 | MS.gene070489:CDS |
| AGAATAGTTACCGATGGGTA+AGG | 0.537725 | 5.4:+67900851 | None:intergenic |
| CTTCAAGCAATTGAGGTAAG+AGG | 0.538407 | 5.4:+67903718 | None:intergenic |
| TCTTGTATAGGTGAAGATCC+AGG | 0.538996 | 5.4:-67903294 | MS.gene070489:CDS |
| AATGGCTCTTCAGGAAGGAC+AGG | 0.539828 | 5.4:-67903327 | MS.gene070489:CDS |
| GACAAGAGACGAGGAAAGAG+AGG | 0.541929 | 5.4:+67903740 | None:intergenic |
| AAGAATTGAGTCTCAGCTCA+AGG | 0.557965 | 5.4:-67903178 | MS.gene070489:CDS |
| AATTCTTGAAAGGAAAAGCA+TGG | 0.577216 | 5.4:+67903194 | None:intergenic |
| TTAATGTGCTAAAGAAGCAT+AGG | 0.578609 | 5.4:+67899833 | None:intergenic |
| TTAATCAGAGAAAACGCCAC+TGG | 0.580206 | 5.4:-67899949 | MS.gene070489:CDS |
| GGATGCCACAAATTACTACA+TGG | 0.582043 | 5.4:-67899894 | MS.gene070489:CDS |
| GATGTGCAAGCCATTTCCTA+TGG | 0.586987 | 5.4:-67899864 | MS.gene070489:CDS |
| GGTTGGAGCACCTCCTGAAG+TGG | 0.595718 | 5.4:-67903391 | MS.gene070489:CDS |
| CAAGCACTTGCAGAATCCAC+AGG | 0.600586 | 5.4:-67900004 | MS.gene070489:CDS |
| GCAAAATGTGAAATATTGAA+TGG | 0.601951 | 5.4:-67903345 | MS.gene070489:CDS |
| TTACAAATGGCCTTACCCAT+CGG | 0.606989 | 5.4:-67900861 | MS.gene070489:intron |
| TGGAGCACCTCCTGAAGTGG+TGG | 0.608141 | 5.4:-67903388 | MS.gene070489:CDS |
| CTGCTTCAAATCTAGGCCTG+TGG | 0.610652 | 5.4:+67899988 | None:intergenic |
| TATTGAATGGCTCTTCAGGA+AGG | 0.613053 | 5.4:-67903332 | MS.gene070489:CDS |
| GCAAATTGCATATCCTCAGA+AGG | 0.614720 | 5.4:+67899923 | None:intergenic |
| ACGCCACTGGAAGCCTTCTG+AGG | 0.619253 | 5.4:-67899936 | MS.gene070489:CDS |
| AGCATAGGCATAGCATCCAT+AGG | 0.634428 | 5.4:+67899848 | None:intergenic |
| AAAGAATGGAAAGTTACCAA+AGG | 0.641055 | 5.4:-67900921 | MS.gene070489:CDS |
| AAGCTAGCCACCACTTCAGG+AGG | 0.647427 | 5.4:+67903381 | None:intergenic |
| AACAACCTAGATACTACTCA+AGG | 0.648557 | 5.4:-67901028 | MS.gene070489:CDS |
| TATCCTCAGAAGGCTTCCAG+TGG | 0.672824 | 5.4:+67899933 | None:intergenic |
| AGGTAAGAGGACAAGAGACG+AGG | 0.679022 | 5.4:+67903731 | None:intergenic |
| AGGTTTGGATCAGTTCATGG+AGG | 0.735955 | 5.4:-67903274 | MS.gene070489:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATAAATATTTTTTA+AGG | + | chr5.4:67902439-67902458 | None:intergenic | 0.0% |
| !! | ATGAAGATAATATAATTTAA+GGG | + | chr5.4:67900469-67900488 | None:intergenic | 10.0% |
| !! | ATTATATTGAAATTAACAAA+TGG | + | chr5.4:67901758-67901777 | None:intergenic | 10.0% |
| !! | TTCTTTAATTAAATTAAACT+TGG | - | chr5.4:67901344-67901363 | MS.gene070489:intron | 10.0% |
| !!! | GATTTTTTTTTTAAACTTTA+TGG | - | chr5.4:67900123-67900142 | MS.gene070489:intron | 10.0% |
| !!! | TCAAATAGTTTTTTTTTTTA+AGG | + | chr5.4:67901616-67901635 | None:intergenic | 10.0% |
| !! | AAACTTTAAATATTGTCATT+AGG | + | chr5.4:67903089-67903108 | None:intergenic | 15.0% |
| !! | AATGAAACCTTAATATAAAA+TGG | - | chr5.4:67903503-67903522 | MS.gene070489:intron | 15.0% |
| !! | CATGAAGATAATATAATTTA+AGG | + | chr5.4:67900470-67900489 | None:intergenic | 15.0% |
| !! | TATTTACTTACGATAAAAAA+GGG | + | chr5.4:67900751-67900770 | None:intergenic | 15.0% |
| !! | TTGTGAAATATTTATGTATT+TGG | + | chr5.4:67901856-67901875 | None:intergenic | 15.0% |
| !! | TTTGTGAATTATTTGTAATT+AGG | - | chr5.4:67903048-67903067 | MS.gene070489:intron | 15.0% |
| !!! | AAGTAAATATTCATTTTAAC+TGG | - | chr5.4:67900523-67900542 | MS.gene070489:intron | 15.0% |
| !!! | ATTATTCTTTTATCAAATGT+AGG | - | chr5.4:67901983-67902002 | MS.gene070489:intron | 15.0% |
| !!! | ATTTTAGAATTTAAAAGATC+AGG | - | chr5.4:67903356-67903375 | MS.gene070489:CDS | 15.0% |
| !!! | TATAATTTTTTTGCACAAAT+GGG | - | chr5.4:67901091-67901110 | MS.gene070489:intron | 15.0% |
| !!! | TTATTCTTTTATCAAATGTA+GGG | - | chr5.4:67901984-67902003 | MS.gene070489:intron | 15.0% |
| !!! | TTTAGAGTTTTTCATATAAT+AGG | - | chr5.4:67902907-67902926 | MS.gene070489:intron | 15.0% |
| !! | AACAATTGCCTATAAAAAAA+GGG | + | chr5.4:67902214-67902233 | None:intergenic | 20.0% |
| !! | AAGTTTAATTCTCAAAACTA+AGG | - | chr5.4:67901429-67901448 | MS.gene070489:intron | 20.0% |
| !! | ACATAAATATTTCACAACTT+AGG | - | chr5.4:67901859-67901878 | MS.gene070489:intron | 20.0% |
| !! | ATAAATATTTCACAACTTAG+GGG | - | chr5.4:67901861-67901880 | MS.gene070489:intron | 20.0% |
| !! | ATAAATCATTGACATATTCA+AGG | + | chr5.4:67902962-67902981 | None:intergenic | 20.0% |
| !! | CATAAATATTTCACAACTTA+GGG | - | chr5.4:67901860-67901879 | MS.gene070489:intron | 20.0% |
| !! | CTATTTACTTACGATAAAAA+AGG | + | chr5.4:67900752-67900771 | None:intergenic | 20.0% |
| !! | TAACAATTGCCTATAAAAAA+AGG | + | chr5.4:67902215-67902234 | None:intergenic | 20.0% |
| !! | TAAGTGCAATTAGTAATATT+TGG | - | chr5.4:67902152-67902171 | MS.gene070489:intron | 20.0% |
| !! | TAGAAAAGAGAAAAAAAGAA+TGG | - | chr5.4:67900600-67900619 | MS.gene070489:intron | 20.0% |
| !! | TAGTTTAGTAAATTGTTAGA+GGG | - | chr5.4:67902233-67902252 | MS.gene070489:intron | 20.0% |
| !! | TATCTTGATTTATAGCATTT+AGG | - | chr5.4:67902856-67902875 | MS.gene070489:intron | 20.0% |
| !! | TTAGTTTAGTAAATTGTTAG+AGG | - | chr5.4:67902232-67902251 | MS.gene070489:intron | 20.0% |
| !!! | AATGTTAATAAACTTTTCCA+AGG | + | chr5.4:67900501-67900520 | None:intergenic | 20.0% |
| !!! | AATTAAGTAAAATGAGGTTT+TGG | - | chr5.4:67900889-67900908 | MS.gene070489:CDS | 20.0% |
| !!! | AGTTTCTGATGTTTTAAATA+AGG | + | chr5.4:67903253-67903272 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTTTCTCTTTTCT+AGG | + | chr5.4:67900601-67900620 | None:intergenic | 20.0% |
| !!! | GTATAATTTTTTTGCACAAA+TGG | - | chr5.4:67901090-67901109 | MS.gene070489:intron | 20.0% |
| !!! | GTATTAGCCATTTTATATTA+AGG | + | chr5.4:67903513-67903532 | None:intergenic | 20.0% |
| !!! | GTTTCTGATGTTTTAAATAA+GGG | + | chr5.4:67903252-67903271 | None:intergenic | 20.0% |
| !!! | TAAATTAAACTTGGTGAAAA+AGG | - | chr5.4:67901353-67901372 | MS.gene070489:intron | 20.0% |
| !!! | TACTGATTATTTTAACGTTA+GGG | - | chr5.4:67903277-67903296 | MS.gene070489:CDS | 20.0% |
| !!! | TATGTCTAAAGTAATTTACA+TGG | - | chr5.4:67901046-67901065 | MS.gene070489:CDS | 20.0% |
| !!! | TTGAAATTGTGTTTTTAACA+TGG | - | chr5.4:67900806-67900825 | MS.gene070489:intron | 20.0% |
| !!! | TTTAGGTTTGATTATTTTGA+AGG | - | chr5.4:67902873-67902892 | MS.gene070489:intron | 20.0% |
| !!! | TTTTTGAAGAAGAAAAAGAA+TGG | - | chr5.4:67902655-67902674 | MS.gene070489:intron | 20.0% |
| ! | AAACTAAACTACTACAAAAG+AGG | + | chr5.4:67901489-67901508 | None:intergenic | 25.0% |
| ! | AAACTAATAAATGTCTAGTC+AGG | + | chr5.4:67902382-67902401 | None:intergenic | 25.0% |
| ! | AAATGATAGATTACTTCCTA+TGG | - | chr5.4:67900863-67900882 | MS.gene070489:CDS | 25.0% |
| ! | AACAAAATTGAACATAACCA+AGG | + | chr5.4:67901211-67901230 | None:intergenic | 25.0% |
| ! | AACTAAACTACTACAAAAGA+GGG | + | chr5.4:67901488-67901507 | None:intergenic | 25.0% |
| ! | AATGATAGATTACTTCCTAT+GGG | - | chr5.4:67900864-67900883 | MS.gene070489:CDS | 25.0% |
| ! | ACAATTGCCTATAAAAAAAG+GGG | + | chr5.4:67902213-67902232 | None:intergenic | 25.0% |
| ! | ACTTTATAGAGAACGAATTA+AGG | + | chr5.4:67901413-67901432 | None:intergenic | 25.0% |
| ! | AGTTCTTTCCTATCATTAAA+TGG | + | chr5.4:67901681-67901700 | None:intergenic | 25.0% |
| ! | AGTTTAGTAAATTGTTAGAG+GGG | - | chr5.4:67902234-67902253 | MS.gene070489:intron | 25.0% |
| ! | ATTCCTTAACTTCATTTACA+TGG | - | chr5.4:67901294-67901313 | MS.gene070489:intron | 25.0% |
| ! | CTTCTTCATTAAGAATCTTA+TGG | - | chr5.4:67901922-67901941 | MS.gene070489:intron | 25.0% |
| ! | GAAAAACTCTAAATTGTTCA+GGG | + | chr5.4:67902900-67902919 | None:intergenic | 25.0% |
| ! | GCAAAATGTGAAATATTGAA+TGG | - | chr5.4:67900245-67900264 | MS.gene070489:intron | 25.0% |
| ! | GGGAATTTGAATAAAAATTG+AGG | + | chr5.4:67901125-67901144 | None:intergenic | 25.0% |
| ! | GTTCTTTCCTATCATTAAAT+GGG | + | chr5.4:67901680-67901699 | None:intergenic | 25.0% |
| ! | TAAATTATCGCAATCATAGT+AGG | + | chr5.4:67903400-67903419 | None:intergenic | 25.0% |
| ! | TAAGATTCTTAATGAAGAAG+TGG | + | chr5.4:67901922-67901941 | None:intergenic | 25.0% |
| ! | TCAATGTTCATAATCATATC+TGG | - | chr5.4:67902830-67902849 | MS.gene070489:intron | 25.0% |
| ! | TCTTCAAAAACTCTTTCTTA+AGG | + | chr5.4:67902645-67902664 | None:intergenic | 25.0% |
| ! | TGAAAAACTCTAAATTGTTC+AGG | + | chr5.4:67902901-67902920 | None:intergenic | 25.0% |
| ! | TGTAATTAGGTACGAAATTT+AGG | - | chr5.4:67903061-67903080 | MS.gene070489:intron | 25.0% |
| ! | TTAAAAGTAAGCTCAAATGA+TGG | - | chr5.4:67901822-67901841 | MS.gene070489:intron | 25.0% |
| ! | TTTAGTACATTAGTTGTTGT+TGG | - | chr5.4:67902079-67902098 | MS.gene070489:intron | 25.0% |
| !! | AAATGTAGTAAGTATTGCAT+TGG | + | chr5.4:67903190-67903209 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTTCATTTGCA+TGG | - | chr5.4:67901449-67901468 | MS.gene070489:intron | 25.0% |
| !! | ATAAACTTTTCCAAGGATAA+TGG | + | chr5.4:67900494-67900513 | None:intergenic | 25.0% |
| !! | ATTTTACTTAATTTCCCCAT+AGG | + | chr5.4:67900882-67900901 | None:intergenic | 25.0% |
| !! | ATTTTCCATGTAGTAATTTG+TGG | + | chr5.4:67903704-67903723 | None:intergenic | 25.0% |
| !! | TCTCAAAAACAAACATTTTG+TGG | + | chr5.4:67900105-67900124 | None:intergenic | 25.0% |
| !! | TTCTCTTTTCTAGGTTTTTA+GGG | + | chr5.4:67900592-67900611 | None:intergenic | 25.0% |
| !! | TTTCTCTTTTCTAGGTTTTT+AGG | + | chr5.4:67900593-67900612 | None:intergenic | 25.0% |
| !!! | AAATGCTTCATTTTTACACA+TGG | - | chr5.4:67901784-67901803 | MS.gene070489:intron | 25.0% |
| !!! | AATGCTTCATTTTTACACAT+GGG | - | chr5.4:67901785-67901804 | MS.gene070489:intron | 25.0% |
| !!! | CTACTGATTATTTTAACGTT+AGG | - | chr5.4:67903276-67903295 | MS.gene070489:CDS | 25.0% |
| !!! | TAGTGTGATTAGAGTTTTAA+AGG | - | chr5.4:67900769-67900788 | MS.gene070489:intron | 25.0% |
| !!! | TTAAGTGTGATTTTTTTTGC+AGG | - | chr5.4:67900178-67900197 | MS.gene070489:intron | 25.0% |
| AAAAATGCCTTCAAAACATC+CGG | + | chr5.4:67901168-67901187 | None:intergenic | 30.0% | |
| AAAGAATGGAAAGTTACCAA+AGG | - | chr5.4:67902669-67902688 | MS.gene070489:intron | 30.0% | |
| AAATCCATCAAGATTGCATT+GGG | + | chr5.4:67901145-67901164 | None:intergenic | 30.0% | |
| AATTCTTGAAAGGAAAAGCA+TGG | + | chr5.4:67900399-67900418 | None:intergenic | 30.0% | |
| ACATTGAATGAGATTTAAGG+AGG | + | chr5.4:67902297-67902316 | None:intergenic | 30.0% | |
| ACCCATATGAAAATCAACTA+AGG | + | chr5.4:67901548-67901567 | None:intergenic | 30.0% | |
| ATGATAGATTACTTCCTATG+GGG | - | chr5.4:67900865-67900884 | MS.gene070489:CDS | 30.0% | |
| ATGATATTCACACAAACACT+AGG | + | chr5.4:67901241-67901260 | None:intergenic | 30.0% | |
| ATTTCTTAATCAATGCACAG+GGG | - | chr5.4:67903211-67903230 | MS.gene070489:CDS | 30.0% | |
| GAACCATGTAAATGAAGTTA+AGG | + | chr5.4:67901300-67901319 | None:intergenic | 30.0% | |
| GATTTCTTAATCAATGCACA+GGG | - | chr5.4:67903210-67903229 | MS.gene070489:CDS | 30.0% | |
| TGAAAGTCCCATTTAATGAT+AGG | - | chr5.4:67901670-67901689 | MS.gene070489:intron | 30.0% | |
| TGATTTCTTAATCAATGCAC+AGG | - | chr5.4:67903209-67903228 | MS.gene070489:CDS | 30.0% | |
| TGGGGAAATTAAGTAAAATG+AGG | - | chr5.4:67900883-67900902 | MS.gene070489:CDS | 30.0% | |
| TTAAGGAAAACATACGACAA+AGG | + | chr5.4:67901396-67901415 | None:intergenic | 30.0% | |
| TTCGAGATCAAAAACATTAG+AGG | - | chr5.4:67903302-67903321 | MS.gene070489:CDS | 30.0% | |
| TTGAACTAGGTTAAAAGGTT+TGG | - | chr5.4:67900840-67900859 | MS.gene070489:intron | 30.0% | |
| TTGTGATTTGATGAACATGT+AGG | - | chr5.4:67903552-67903571 | MS.gene070489:intron | 30.0% | |
| ! | ATTTGAAGCAGATCAACAAT+TGG | - | chr5.4:67903614-67903633 | MS.gene070489:intron | 30.0% |
| ! | CATCAATTGACAAAGTCTTT+TGG | - | chr5.4:67901701-67901720 | MS.gene070489:intron | 30.0% |
| ! | GTCAATGATTTATGCTTTTG+AGG | - | chr5.4:67903147-67903166 | MS.gene070489:intron | 30.0% |
| ! | TGTAGTAGTTTAGTTTCTAG+TGG | - | chr5.4:67901493-67901512 | MS.gene070489:intron | 30.0% |
| !! | GCCTTAGTTGATTTTCATAT+GGG | - | chr5.4:67901544-67901563 | MS.gene070489:intron | 30.0% |
| !! | TCTCTTTTCTAGGTTTTTAG+GGG | + | chr5.4:67900591-67900610 | None:intergenic | 30.0% |
| !! | TGCCTTAGTTGATTTTCATA+TGG | - | chr5.4:67901543-67901562 | MS.gene070489:intron | 30.0% |
| !!! | GAATGGTCTATGTGTTTTTT+TGG | - | chr5.4:67900617-67900636 | MS.gene070489:intron | 30.0% |
| !!! | TACATGACCCCTTTTTTTAT+AGG | - | chr5.4:67902203-67902222 | MS.gene070489:intron | 30.0% |
| !!! | TGGTGTTGTGTTATTTTGAA+AGG | - | chr5.4:67902493-67902512 | MS.gene070489:intron | 30.0% |
| AACAACCTAGATACTACTCA+AGG | - | chr5.4:67902562-67902581 | MS.gene070489:intron | 35.0% | |
| AATTCCCAATGCAATCTTGA+TGG | - | chr5.4:67901138-67901157 | MS.gene070489:intron | 35.0% | |
| ACACAACACCACAAATCAAA+CGG | + | chr5.4:67902484-67902503 | None:intergenic | 35.0% | |
| AGATGTAGAATAGTTACCGA+TGG | + | chr5.4:67902748-67902767 | None:intergenic | 35.0% | |
| ATCTTCATGACCATTATCCT+TGG | - | chr5.4:67900481-67900500 | MS.gene070489:intron | 35.0% | |
| ATGACCAAGAATTAGTGAGA+TGG | - | chr5.4:67900725-67900744 | MS.gene070489:intron | 35.0% | |
| CAGTTCATGTAATCATTGTC+CGG | + | chr5.4:67902349-67902368 | None:intergenic | 35.0% | |
| GAAAGAAGAACTAACACACA+AGG | + | chr5.4:67901265-67901284 | None:intergenic | 35.0% | |
| GAAATATTGAATGGCTCTTC+AGG | - | chr5.4:67900254-67900273 | MS.gene070489:intron | 35.0% | |
| GAAATCCATCAAGATTGCAT+TGG | + | chr5.4:67901146-67901165 | None:intergenic | 35.0% | |
| GATGTAGAATAGTTACCGAT+GGG | + | chr5.4:67902747-67902766 | None:intergenic | 35.0% | |
| GGAAGTAGTAGTTCTTGTAT+AGG | - | chr5.4:67900284-67900303 | MS.gene070489:intron | 35.0% | |
| GGGACATTGAATGAGATTTA+AGG | + | chr5.4:67902300-67902319 | None:intergenic | 35.0% | |
| GGTGATAATTGAACTACTAG+AGG | + | chr5.4:67900567-67900586 | None:intergenic | 35.0% | |
| GGTGTTTGAACTAGGTTAAA+AGG | - | chr5.4:67900835-67900854 | MS.gene070489:intron | 35.0% | |
| GTCATATTATACTTACCTCG+CGG | + | chr5.4:67900710-67900729 | None:intergenic | 35.0% | |
| TAATTGAACTACTAGAGGTG+TGG | + | chr5.4:67900562-67900581 | None:intergenic | 35.0% | |
| TCATATATCAATCATGCCGT+TGG | - | chr5.4:67902777-67902796 | MS.gene070489:intron | 35.0% | |
| TGACAACTACGATTGATTGT+TGG | + | chr5.4:67900992-67901011 | None:intergenic | 35.0% | |
| TGTGCTATGAAACATTCCAA+CGG | + | chr5.4:67902796-67902815 | None:intergenic | 35.0% | |
| TGTTAACCCTCTAGTTACTA+GGG | - | chr5.4:67900657-67900676 | MS.gene070489:intron | 35.0% | |
| TGTTGATCTGCTTCAAATCT+AGG | + | chr5.4:67903612-67903631 | None:intergenic | 35.0% | |
| TTAACCTAGTTCAAACACCT+TGG | + | chr5.4:67900834-67900853 | None:intergenic | 35.0% | |
| ! | AAAAGCATGGCTTCTTTGAA+GGG | + | chr5.4:67900386-67900405 | None:intergenic | 35.0% |
| !! | AGTAGTTTAGTTTCTAGTGG+TGG | - | chr5.4:67901496-67901515 | MS.gene070489:intron | 35.0% |
| !! | ATGCAATCTTGATGGATTTC+CGG | - | chr5.4:67901146-67901165 | MS.gene070489:intron | 35.0% |
| !! | CTCTTTTCTAGGTTTTTAGG+GGG | + | chr5.4:67900590-67900609 | None:intergenic | 35.0% |
| !! | GTGTTTTTAACATGGATCCA+AGG | - | chr5.4:67900814-67900833 | MS.gene070489:intron | 35.0% |
| !! | TAGTTCTTCCGTTTGATTTG+TGG | - | chr5.4:67902473-67902492 | MS.gene070489:intron | 35.0% |
| !! | TCTTTTCTAGGTTTTTAGGG+GGG | + | chr5.4:67900589-67900608 | None:intergenic | 35.0% |
| !!! | CAAGTTTTCGCTTGTTTTGA+TGG | - | chr5.4:67900154-67900173 | MS.gene070489:intron | 35.0% |
| !!! | GTGTGATTTTTTTTGCAGGT+TGG | - | chr5.4:67900182-67900201 | MS.gene070489:intron | 35.0% |
| AAGAATTGAGTCTCAGCTCA+AGG | - | chr5.4:67900412-67900431 | MS.gene070489:intron | 40.0% | |
| AAGCATTCCTCACACTAATG+TGG | - | chr5.4:67902042-67902061 | MS.gene070489:intron | 40.0% | |
| AGAATAGTTACCGATGGGTA+AGG | + | chr5.4:67902742-67902761 | None:intergenic | 40.0% | |
| AGCATTCCTCACACTAATGT+GGG | - | chr5.4:67902043-67902062 | MS.gene070489:intron | 40.0% | |
| AGTAAATTGTTAGAGGGGAG+AGG | - | chr5.4:67902239-67902258 | MS.gene070489:intron | 40.0% | |
| CTCTTACCTCAATTGCTTGA+AGG | - | chr5.4:67899873-67899892 | MS.gene070489:CDS | 40.0% | |
| CTTCAAGCAATTGAGGTAAG+AGG | + | chr5.4:67899875-67899894 | None:intergenic | 40.0% | |
| CTTCACCTTGAGTAGTATCT+AGG | + | chr5.4:67902570-67902589 | None:intergenic | 40.0% | |
| GCAAATTGCATATCCTCAGA+AGG | + | chr5.4:67903670-67903689 | None:intergenic | 40.0% | |
| GCTGAGACTCAATTCTTGAA+AGG | + | chr5.4:67900409-67900428 | None:intergenic | 40.0% | |
| GGATGCCACAAATTACTACA+TGG | - | chr5.4:67903696-67903715 | MS.gene070489:intron | 40.0% | |
| GGGACTTTCAACTTCTTTAG+TGG | + | chr5.4:67901660-67901679 | None:intergenic | 40.0% | |
| GTGTTAACCCTCTAGTTACT+AGG | - | chr5.4:67900656-67900675 | MS.gene070489:intron | 40.0% | |
| TAACCAAGGTCACACATGAA+AGG | + | chr5.4:67901197-67901216 | None:intergenic | 40.0% | |
| TACTACTCAAGGTGAAGATC+AGG | - | chr5.4:67902573-67902592 | MS.gene070489:intron | 40.0% | |
| TAGTTTCCGAGGATCAAACT+CGG | - | chr5.4:67902269-67902288 | MS.gene070489:intron | 40.0% | |
| TATAGGTGAAGATCCAGGTT+TGG | - | chr5.4:67900301-67900320 | MS.gene070489:intron | 40.0% | |
| TATTGAATGGCTCTTCAGGA+AGG | - | chr5.4:67900258-67900277 | MS.gene070489:intron | 40.0% | |
| TCTTGTATAGGTGAAGATCC+AGG | - | chr5.4:67900296-67900315 | MS.gene070489:intron | 40.0% | |
| TTAATCAGAGAAAACGCCAC+TGG | - | chr5.4:67903641-67903660 | MS.gene070489:intron | 40.0% | |
| TTCACAACTTAGGGGATGAT+TGG | - | chr5.4:67901869-67901888 | MS.gene070489:intron | 40.0% | |
| TTTCCTTTCATGTGTGACCT+TGG | - | chr5.4:67901191-67901210 | MS.gene070489:intron | 40.0% | |
| ! | ATTCTGCAAGTGCTTGCTTT+TGG | + | chr5.4:67903582-67903601 | None:intergenic | 40.0% |
| ! | GAAAAGCATGGCTTCTTTGA+AGG | + | chr5.4:67900387-67900406 | None:intergenic | 40.0% |
| ! | GAGGAAAATGTTAGTTTCCG+AGG | - | chr5.4:67902258-67902277 | MS.gene070489:intron | 40.0% |
| ! | TGTGTGAGAGTTTGAAGTTC+AGG | + | chr5.4:67899900-67899919 | None:intergenic | 40.0% |
| ! | TTACAAATGGCCTTACCCAT+CGG | - | chr5.4:67902729-67902748 | MS.gene070489:intron | 40.0% |
| !! | AGTTTAGTTTCTAGTGGTGG+AGG | - | chr5.4:67901499-67901518 | MS.gene070489:intron | 40.0% |
| !! | CGCAAGTATAGTGGATATCT+AGG | - | chr5.4:67902616-67902635 | MS.gene070489:intron | 40.0% |
| !! | CTTTTCTAGGTTTTTAGGGG+GGG | + | chr5.4:67900588-67900607 | None:intergenic | 40.0% |
| !! | GGATATGCAATTTGCTGTGA+TGG | - | chr5.4:67903675-67903694 | MS.gene070489:intron | 40.0% |
| !! | GTTGCTGTTTCAACTGACTT+TGG | - | chr5.4:67900437-67900456 | MS.gene070489:intron | 40.0% |
| !! | TGGATTTCCGGATGTTTTGA+AGG | - | chr5.4:67901158-67901177 | MS.gene070489:intron | 40.0% |
| !! | TTCTGCAAGTGCTTGCTTTT+GGG | + | chr5.4:67903581-67903600 | None:intergenic | 40.0% |
| AACTACTTGATTGGTGGAGC+AGG | - | chr5.4:67902704-67902723 | MS.gene070489:intron | 45.0% | |
| AGCATAGGCATAGCATCCAT+AGG | + | chr5.4:67903745-67903764 | None:intergenic | 45.0% | |
| AGGGCCATCTCACTAATTCT+TGG | + | chr5.4:67900732-67900751 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTTCATGG+AGG | - | chr5.4:67900316-67900335 | MS.gene070489:intron | 45.0% | |
| ATGTAATCATTGTCCGGCGT+AGG | + | chr5.4:67902343-67902362 | None:intergenic | 45.0% | |
| CAGCTTCTACGCAAGTATAG+TGG | - | chr5.4:67902607-67902626 | MS.gene070489:intron | 45.0% | |
| CGACAAAGGATGACAAGACA+TGG | + | chr5.4:67901382-67901401 | None:intergenic | 45.0% | |
| CTCGACAGCAACTACTTGAT+TGG | - | chr5.4:67902695-67902714 | MS.gene070489:intron | 45.0% | |
| GACAGCAACTACTTGATTGG+TGG | - | chr5.4:67902698-67902717 | MS.gene070489:intron | 45.0% | |
| GATGTGCAAGCCATTTCCTA+TGG | - | chr5.4:67903726-67903745 | MS.gene070489:CDS | 45.0% | |
| GGCATAGCATCCATAGGAAA+TGG | + | chr5.4:67903739-67903758 | None:intergenic | 45.0% | |
| TAGGGGATGATTGGCAATGT+GGG | - | chr5.4:67901878-67901897 | MS.gene070489:intron | 45.0% | |
| TCAGGACCTTCAAGCAATTG+AGG | + | chr5.4:67899882-67899901 | None:intergenic | 45.0% | |
| TCCAGGTTTGGATCAGTTCA+TGG | - | chr5.4:67900313-67900332 | MS.gene070489:intron | 45.0% | |
| TCCATGAACTGATCCAAACC+TGG | + | chr5.4:67900317-67900336 | None:intergenic | 45.0% | |
| TTAGGGGATGATTGGCAATG+TGG | - | chr5.4:67901877-67901896 | MS.gene070489:intron | 45.0% | |
| TTGTGTCCCACATTAGTGTG+AGG | + | chr5.4:67902052-67902071 | None:intergenic | 45.0% | |
| ! | GGATCCAAGGTGTTTGAACT+AGG | - | chr5.4:67900827-67900846 | MS.gene070489:intron | 45.0% |
| ! | TAATCAATGCACAGGGGCAT+CGG | - | chr5.4:67903217-67903236 | MS.gene070489:CDS | 45.0% |
| !!! | AGTTTTTTTTTTTTTTTTTA+AGG | + | chr5.4:67903016-67903035 | None:intergenic | 5.0% |
| AACCCTCTAGTTACTAGGGC+AGG | - | chr5.4:67900661-67900680 | MS.gene070489:intron | 50.0% | |
| AATGGCTCTTCAGGAAGGAC+AGG | - | chr5.4:67900263-67900282 | MS.gene070489:intron | 50.0% | |
| AATGTGGGACACGAGTGGAT+TGG | - | chr5.4:67901893-67901912 | MS.gene070489:intron | 50.0% | |
| ACCCTCTAGTTACTAGGGCA+GGG | - | chr5.4:67900662-67900681 | MS.gene070489:intron | 50.0% | |
| AGGTAAGAGGACAAGAGACG+AGG | + | chr5.4:67899862-67899881 | None:intergenic | 50.0% | |
| AGTTGCTGTCGAGCTTCCTT+TGG | + | chr5.4:67902688-67902707 | None:intergenic | 50.0% | |
| CAAGCACTTGCAGAATCCAC+AGG | - | chr5.4:67903586-67903605 | MS.gene070489:intron | 50.0% | |
| CTGCTTCAAATCTAGGCCTG+TGG | + | chr5.4:67903605-67903624 | None:intergenic | 50.0% | |
| GACAAGAGACGAGGAAAGAG+AGG | + | chr5.4:67899853-67899872 | None:intergenic | 50.0% | |
| GAGGTTCCGAGTTTGATCCT+CGG | + | chr5.4:67902278-67902297 | None:intergenic | 50.0% | |
| GGTGGAGCAGGCATTACAAA+TGG | - | chr5.4:67902716-67902735 | MS.gene070489:intron | 50.0% | |
| TATCCTCAGAAGGCTTCCAG+TGG | + | chr5.4:67903660-67903679 | None:intergenic | 50.0% | |
| TCTAAGCTAGCCACCACTTC+AGG | + | chr5.4:67900215-67900234 | None:intergenic | 50.0% | |
| !! | AGTTTCTAGTGGTGGAGGCA+GGG | - | chr5.4:67901504-67901523 | MS.gene070489:intron | 50.0% |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr5.4:67902320-67902339 | None:intergenic | 50.0% |
| !! | TAGTTTCTAGTGGTGGAGGC+AGG | - | chr5.4:67901503-67901522 | MS.gene070489:intron | 50.0% |
| !! | TGAAGTGGTGGCTAGCTTAG+AGG | - | chr5.4:67900214-67900233 | MS.gene070489:intron | 50.0% |
| AAGCTAGCCACCACTTCAGG+AGG | + | chr5.4:67900212-67900231 | None:intergenic | 55.0% | |
| ATTGTCCGGCGTAGGTAGCT+CGG | + | chr5.4:67902335-67902354 | None:intergenic | 55.0% | |
| CCCCTGCCCTAGTAACTAGA+GGG | + | chr5.4:67900666-67900685 | None:intergenic | 55.0% | |
| CCCTCTAGTTACTAGGGCAG+GGG | - | chr5.4:67900663-67900682 | MS.gene070489:intron | 55.0% | |
| CCTCTAGTTACTAGGGCAGG+GGG | - | chr5.4:67900664-67900683 | MS.gene070489:intron | 55.0% | |
| CGGCCAACTCTGGATTACCA+GGG | + | chr5.4:67900690-67900709 | None:intergenic | 55.0% | |
| TTGGCAATGTGGGACACGAG+TGG | - | chr5.4:67901888-67901907 | MS.gene070489:intron | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr5.4:67902321-67902340 | None:intergenic | 55.0% |
| !! | GTTTCTAGTGGTGGAGGCAG+GGG | - | chr5.4:67901505-67901524 | MS.gene070489:intron | 55.0% |
| ACCAACCGAGCTACCTACGC+CGG | - | chr5.4:67902327-67902346 | MS.gene070489:intron | 60.0% | |
| ACGCCACTGGAAGCCTTCTG+AGG | - | chr5.4:67903654-67903673 | MS.gene070489:intron | 60.0% | |
| ACTTACCTCGCGGCCAACTC+TGG | + | chr5.4:67900700-67900719 | None:intergenic | 60.0% | |
| CCCCCTGCCCTAGTAACTAG+AGG | + | chr5.4:67900667-67900686 | None:intergenic | 60.0% | |
| GCGGCCAACTCTGGATTACC+AGG | + | chr5.4:67900691-67900710 | None:intergenic | 60.0% | |
| GGGCCCTGGTAATCCAGAGT+TGG | - | chr5.4:67900684-67900703 | MS.gene070489:intron | 60.0% | |
| GTAATCCAGAGTTGGCCGCG+AGG | - | chr5.4:67900692-67900711 | MS.gene070489:intron | 60.0% | |
| ! | GGTTGGAGCACCTCCTGAAG+TGG | - | chr5.4:67900199-67900218 | MS.gene070489:intron | 60.0% |
| ! | TGGAGCACCTCCTGAAGTGG+TGG | - | chr5.4:67900202-67900221 | MS.gene070489:intron | 60.0% |
| TCCGGCGTAGGTAGCTCGGT+TGG | + | chr5.4:67902331-67902350 | None:intergenic | 65.0% | |
| GTTACTAGGGCAGGGGGCCC+TGG | - | chr5.4:67900670-67900689 | MS.gene070489:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 67899841 | 67903771 | 67899841 | ID=MS.gene070489 |
| chr5.4 | mRNA | 67899841 | 67903771 | 67899841 | ID=MS.gene070489.t1;Parent=MS.gene070489 |
| chr5.4 | exon | 67903718 | 67903771 | 67903718 | ID=MS.gene070489.t1.exon1;Parent=MS.gene070489.t1 |
| chr5.4 | CDS | 67903718 | 67903771 | 67903718 | ID=cds.MS.gene070489.t1;Parent=MS.gene070489.t1 |
| chr5.4 | exon | 67903154 | 67903412 | 67903154 | ID=MS.gene070489.t1.exon2;Parent=MS.gene070489.t1 |
| chr5.4 | CDS | 67903154 | 67903412 | 67903154 | ID=cds.MS.gene070489.t1;Parent=MS.gene070489.t1 |
| chr5.4 | exon | 67900862 | 67901097 | 67900862 | ID=MS.gene070489.t1.exon3;Parent=MS.gene070489.t1 |
| chr5.4 | CDS | 67900862 | 67901097 | 67900862 | ID=cds.MS.gene070489.t1;Parent=MS.gene070489.t1 |
| chr5.4 | exon | 67899841 | 67900038 | 67899841 | ID=MS.gene070489.t1.exon4;Parent=MS.gene070489.t1 |
| chr5.4 | CDS | 67899841 | 67900038 | 67899841 | ID=cds.MS.gene070489.t1;Parent=MS.gene070489.t1 |
| Gene Sequence |
| Protein sequence |
