Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071983.t1 | XP_003593103.1 | 96.4 | 197 | 7 | 0 | 1 | 197 | 1 | 197 | 4.10E-103 | 384 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071983.t1 | P43255 | 65.5 | 197 | 68 | 0 | 1 | 197 | 1 | 197 | 5.8e-74 | 278.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071983.t1 | G7IL66 | 96.4 | 197 | 7 | 0 | 1 | 197 | 1 | 197 | 3.0e-103 | 384.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene071983 | 0.850314 | 1.84E-60 | -1.69E-46 |
| MS.gene050320 | MS.gene071983 | 0.818007 | 2.45E-52 | -1.69E-46 |
| MS.gene051063 | MS.gene071983 | 0.818222 | 2.19E-52 | -1.69E-46 |
| MS.gene051330 | MS.gene071983 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene071983 | 0.834679 | 2.61E-56 | -1.69E-46 |
| MS.gene051748 | MS.gene071983 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene051756 | MS.gene071983 | 0.812751 | 3.62E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene071983 | 0.845715 | 3.42E-59 | -1.69E-46 |
| MS.gene053109 | MS.gene071983 | 0.845865 | 3.11E-59 | -1.69E-46 |
| MS.gene056075 | MS.gene071983 | 0.821083 | 4.88E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene071983 | 0.820724 | 5.90E-53 | -1.69E-46 |
| MS.gene057094 | MS.gene071983 | 0.834516 | 2.86E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene071983 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene071983 | 0.80226 | 6.11E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene071983 | 0.859873 | 3.06E-63 | -1.69E-46 |
| MS.gene061145 | MS.gene071983 | 0.849259 | 3.63E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071983.t1 | MTR_2g007840 | 96.447 | 197 | 7 | 0 | 1 | 197 | 1 | 197 | 2.72e-142 | 394 |
| MS.gene071983.t1 | MTR_0153s0030 | 97.633 | 169 | 4 | 0 | 29 | 197 | 6 | 174 | 7.98e-123 | 344 |
| MS.gene071983.t1 | MTR_2g007840 | 96.026 | 151 | 6 | 0 | 1 | 151 | 1 | 151 | 1.44e-106 | 302 |
| MS.gene071983.t1 | MTR_0153s0020 | 97.701 | 87 | 2 | 0 | 29 | 115 | 1 | 87 | 1.97e-60 | 184 |
| MS.gene071983.t1 | MTR_2g007855 | 90.769 | 65 | 6 | 0 | 114 | 178 | 3 | 67 | 4.86e-36 | 121 |
| MS.gene071983.t1 | MTR_0153s0060 | 97.778 | 45 | 1 | 0 | 153 | 197 | 102 | 146 | 1.81e-25 | 96.7 |
| MS.gene071983.t1 | MTR_0153s0060 | 92.105 | 38 | 3 | 0 | 114 | 151 | 3 | 40 | 1.12e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071983.t1 | AT4G14110 | 65.482 | 197 | 68 | 0 | 1 | 197 | 1 | 197 | 1.85e-99 | 286 |
Find 37 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATGTTGCTTTATTTC+TGG | 0.193799 | 2.4:-75065813 | MS.gene071983:CDS |
| GAAATGAAGCCTTGGAGTTC+TGG | 0.262584 | 2.4:+75066758 | None:intergenic |
| GTCAATGCTGTGTGGAAAAT+TGG | 0.311288 | 2.4:-75066845 | MS.gene071983:CDS |
| GCCCTACGCTGTTCATCTTC+TGG | 0.325612 | 2.4:-75067526 | MS.gene071983:CDS |
| TTCCACACAGCATTGACTTC+AGG | 0.333842 | 2.4:+75066851 | None:intergenic |
| GGCTTCATTTCTGCTTTCTC+AGG | 0.354634 | 2.4:-75066746 | MS.gene071983:intron |
| CTGCGATAATCTCATGCTTC+AGG | 0.365372 | 2.4:-75067677 | MS.gene071983:intron |
| CAGCTTTGGTTAAGGAACTA+TGG | 0.367151 | 2.4:-75066818 | MS.gene071983:CDS |
| GAAGATGTTGCTTTATTTCT+GGG | 0.390251 | 2.4:-75065812 | MS.gene071983:CDS |
| GGAAAATTGGTCAACAGCTT+TGG | 0.393816 | 2.4:-75066832 | MS.gene071983:CDS |
| TCCACACAGCATTGACTTCA+GGG | 0.423679 | 2.4:+75066852 | None:intergenic |
| TTGCTTTCTTTGATTGAAGA+AGG | 0.437065 | 2.4:+75066875 | None:intergenic |
| TTGGTCAACAGCTTTGGTTA+AGG | 0.451484 | 2.4:-75066826 | MS.gene071983:CDS |
| AGTTTCTGCACTGACACAAC+AGG | 0.465172 | 2.4:+75064274 | None:intergenic |
| AAAAGCTTCAATGCTCAAGA+TGG | 0.504286 | 2.4:+75064212 | None:intergenic |
| AGAAAGCAGAAATGAAGCCT+TGG | 0.530730 | 2.4:+75066750 | None:intergenic |
| ATCAGCAGTGAAAACCGCAT+TGG | 0.533670 | 2.4:-75067731 | MS.gene071983:CDS |
| CTCACTCAGGTTGCTGCCGA+CGG | 0.541618 | 2.4:-75067570 | MS.gene071983:intron |
| GCCAGAAGATGAACAGCGTA+GGG | 0.573169 | 2.4:+75067525 | None:intergenic |
| TAGATGTACTACAACAAGGT+TGG | 0.575581 | 2.4:-75064339 | MS.gene071983:CDS |
| GGACCGTGGACAATGCCTCT+CGG | 0.578097 | 2.4:-75064318 | MS.gene071983:CDS |
| GTCAGCTGTTGCAATTTGCG+AGG | 0.595780 | 2.4:+75064247 | None:intergenic |
| AGCCAGAAGATGAACAGCGT+AGG | 0.603390 | 2.4:+75067524 | None:intergenic |
| GAACTATGGTGGAGTGCATG+AGG | 0.608311 | 2.4:-75066804 | MS.gene071983:CDS |
| TTTATTTCTGGGAATGAGTG+AGG | 0.610761 | 2.4:-75065801 | MS.gene071983:CDS |
| GAGTGGAGTCCAGAACTCCA+AGG | 0.626372 | 2.4:-75066767 | MS.gene071983:CDS |
| CATCCGAGAGGCATTGTCCA+CGG | 0.629704 | 2.4:+75064315 | None:intergenic |
| GGAGTGCATGAGGCGGTCCG+TGG | 0.631136 | 2.4:-75066794 | MS.gene071983:CDS |
| CTTTGGTTAAGGAACTATGG+TGG | 0.662985 | 2.4:-75066815 | MS.gene071983:CDS |
| CTGGACTCCACTCAAAACCA+CGG | 0.676520 | 2.4:+75066777 | None:intergenic |
| CTATGGTGGAGTGCATGAGG+CGG | 0.686404 | 2.4:-75066801 | MS.gene071983:CDS |
| GTCGTGAAAAGCAACACCGT+CGG | 0.689069 | 2.4:+75067554 | None:intergenic |
| ACCCTGAAGTCAATGCTGTG+TGG | 0.706694 | 2.4:-75066853 | MS.gene071983:CDS |
| GTAAGATTTGGATTCCAATG+CGG | 0.707856 | 2.4:+75067717 | None:intergenic |
| ACTACAACAAGGTTGGACCG+TGG | 0.718051 | 2.4:-75064332 | MS.gene071983:CDS |
| ATTGTAGATGTACTACAACA+AGG | 0.719816 | 2.4:-75064343 | MS.gene071983:intron |
| CTTCACAGTAAGCATCCGAG+AGG | 0.754120 | 2.4:+75064303 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATAAATAATGTAGA+TGG | - | chr2.4:75064519-75064538 | MS.gene071983:intron | 10.0% |
| !! | GAATAATAAAATTAAGTAGA+GGG | + | chr2.4:75064492-75064511 | None:intergenic | 15.0% |
| !! | GATGAATAATATAATTTCTT+TGG | - | chr2.4:75065837-75065856 | MS.gene071983:CDS | 15.0% |
| !! | TGAATAATAAAATTAAGTAG+AGG | + | chr2.4:75064493-75064512 | None:intergenic | 15.0% |
| !!! | AAGTTAAATTAGTTTAATGT+TGG | - | chr2.4:75064558-75064577 | MS.gene071983:intron | 15.0% |
| !!! | TGGAAATATATGTTTTTTTA+CGG | - | chr2.4:75066861-75066880 | MS.gene071983:CDS | 15.0% |
| !!! | TTTGTTTTATAATTGACAAT+AGG | - | chr2.4:75064607-75064626 | MS.gene071983:intron | 15.0% |
| !!! | TTTTGAGTTATATTTAAAGA+GGG | + | chr2.4:75065811-75065830 | None:intergenic | 15.0% |
| !! | AAAGGAAAAAAATGAATGAA+AGG | - | chr2.4:75067052-75067071 | MS.gene071983:intron | 20.0% |
| !! | ACAACATTAACAAGATATAA+TGG | + | chr2.4:75065447-75065466 | None:intergenic | 20.0% |
| !! | CAACATTAACAAGATATAAT+GGG | + | chr2.4:75065446-75065465 | None:intergenic | 20.0% |
| !! | CATTTATTATAACTTGATTG+GGG | - | chr2.4:75066324-75066343 | MS.gene071983:intron | 20.0% |
| !! | CTATAATGATATCATAGAAA+GGG | + | chr2.4:75067579-75067598 | None:intergenic | 20.0% |
| !! | GCATTTATTATAACTTGATT+GGG | - | chr2.4:75066323-75066342 | MS.gene071983:intron | 20.0% |
| !! | TCTATAATGATATCATAGAA+AGG | + | chr2.4:75067580-75067599 | None:intergenic | 20.0% |
| !! | TGCATTTATTATAACTTGAT+TGG | - | chr2.4:75066322-75066341 | MS.gene071983:intron | 20.0% |
| !! | TTCAATAATCAATACATCAA+TGG | + | chr2.4:75065527-75065546 | None:intergenic | 20.0% |
| !!! | CTTTTGAGTTATATTTAAAG+AGG | + | chr2.4:75065812-75065831 | None:intergenic | 20.0% |
| !!! | TATTGATTATATTTTGTGCT+TGG | - | chr2.4:75067146-75067165 | MS.gene071983:intron | 20.0% |
| !!! | TCAATCTTTAACTTCTTAAA+TGG | - | chr2.4:75066750-75066769 | MS.gene071983:CDS | 20.0% |
| !!! | TGCTTGATTAATTTTTCAAA+AGG | + | chr2.4:75067533-75067552 | None:intergenic | 20.0% |
| !!! | TTCATTCATTTTTTTCCTTT+TGG | + | chr2.4:75067052-75067071 | None:intergenic | 20.0% |
| !!! | TTTCAATTTATTTTCTAAGC+AGG | - | chr2.4:75065968-75065987 | MS.gene071983:intron | 20.0% |
| !!! | TTTGATCTTCACTATATTTT+AGG | - | chr2.4:75065308-75065327 | MS.gene071983:intron | 20.0% |
| ! | AAAATGGAGGAGAAAATAAT+GGG | - | chr2.4:75067018-75067037 | MS.gene071983:intron | 25.0% |
| ! | AACATTGCAAAAAGTTGAAT+TGG | - | chr2.4:75065709-75065728 | MS.gene071983:intron | 25.0% |
| ! | AAGTGGCTAAAAATTGTTAT+TGG | - | chr2.4:75065621-75065640 | MS.gene071983:intron | 25.0% |
| ! | AGTGTAATATAGTTTGAACT+TGG | - | chr2.4:75065746-75065765 | MS.gene071983:intron | 25.0% |
| ! | ATATTAGTGTCTCACTTTAT+TGG | - | chr2.4:75066782-75066801 | MS.gene071983:CDS | 25.0% |
| ! | CTTTCATTAATTACATCATG+TGG | + | chr2.4:75066660-75066679 | None:intergenic | 25.0% |
| ! | GAAGGAAATAGAATGAATAT+TGG | - | chr2.4:75066967-75066986 | MS.gene071983:intron | 25.0% |
| ! | GTGTAATATAGTTTGAACTT+GGG | - | chr2.4:75065747-75065766 | MS.gene071983:intron | 25.0% |
| ! | TATTAGTGTCTCACTTTATT+GGG | - | chr2.4:75066783-75066802 | MS.gene071983:CDS | 25.0% |
| ! | TATTGAATCTGTAGTATTGT+TGG | - | chr2.4:75065540-75065559 | MS.gene071983:intron | 25.0% |
| ! | TGATAATATTAGATAGTGCA+GGG | + | chr2.4:75067087-75067106 | None:intergenic | 25.0% |
| ! | TTTATTGTTAATTCTCACTC+AGG | - | chr2.4:75064375-75064394 | MS.gene071983:intron | 25.0% |
| !! | ACTAAATTTTATGTGATCCA+TGG | + | chr2.4:75065888-75065907 | None:intergenic | 25.0% |
| !! | ATGGGTTATAATAAAAGCAA+CGG | + | chr2.4:75065428-75065447 | None:intergenic | 25.0% |
| !!! | ATTTAAGGTGGTTTGTTTTT+GGG | - | chr2.4:75066811-75066830 | MS.gene071983:CDS | 25.0% |
| !!! | CTTGTAACTTCTTTGATTTT+AGG | - | chr2.4:75065000-75065019 | MS.gene071983:intron | 25.0% |
| !!! | TTTAAGTTGTTTATCCAAAC+AGG | - | chr2.4:75064936-75064955 | MS.gene071983:intron | 25.0% |
| AAACATATATTTCCAAACCG+TGG | + | chr2.4:75066856-75066875 | None:intergenic | 30.0% | |
| AAATGGAGGAGAAAATAATG+GGG | - | chr2.4:75067019-75067038 | MS.gene071983:intron | 30.0% | |
| AACATTGTTTATGATGCAAG+AGG | + | chr2.4:75066255-75066274 | None:intergenic | 30.0% | |
| ACAACTTATAGACATGTCAT+AGG | + | chr2.4:75064758-75064777 | None:intergenic | 30.0% | |
| AGATGAAGTTCATTAATGCT+CGG | - | chr2.4:75066369-75066388 | MS.gene071983:intron | 30.0% | |
| AGCAATAAGAGAATCTTCTA+AGG | - | chr2.4:75066623-75066642 | MS.gene071983:intron | 30.0% | |
| ATTGTAGATGTACTACAACA+AGG | - | chr2.4:75067615-75067634 | MS.gene071983:intron | 30.0% | |
| CTGATAATATTAGATAGTGC+AGG | + | chr2.4:75067088-75067107 | None:intergenic | 30.0% | |
| CTTTATTGGGTTTGGATTTA+AGG | - | chr2.4:75066796-75066815 | MS.gene071983:CDS | 30.0% | |
| GAAAATGGAGGAGAAAATAA+TGG | - | chr2.4:75067017-75067036 | MS.gene071983:intron | 30.0% | |
| GAGACTATTTGGTAGATTTA+TGG | - | chr2.4:75064726-75064745 | MS.gene071983:intron | 30.0% | |
| GTATTTAGTGTTCAAGATAG+TGG | - | chr2.4:75065577-75065596 | MS.gene071983:intron | 30.0% | |
| TCACAAATGCTAATGTAAGT+AGG | + | chr2.4:75064660-75064679 | None:intergenic | 30.0% | |
| TGGAATATAACAAGGAGAAT+TGG | + | chr2.4:75066514-75066533 | None:intergenic | 30.0% | |
| TTGCTTTAGTATGTTATGGA+TGG | - | chr2.4:75065685-75065704 | MS.gene071983:intron | 30.0% | |
| TTGCTTTCTTTGATTGAAGA+AGG | + | chr2.4:75065086-75065105 | None:intergenic | 30.0% | |
| TTTCATTTCATAAGCAATCC+CGG | + | chr2.4:75064805-75064824 | None:intergenic | 30.0% | |
| ! | AGCAATTTTGTCGTAAGATT+TGG | + | chr2.4:75064256-75064275 | None:intergenic | 30.0% |
| ! | TTTTCCAGAACTTTACACAA+AGG | - | chr2.4:75066079-75066098 | MS.gene071983:intron | 30.0% |
| !! | AAGTTCTGGAAAAAGCATAT+TGG | + | chr2.4:75066072-75066091 | None:intergenic | 30.0% |
| !! | AGTGATTGATCACTTGTTTT+TGG | - | chr2.4:75065776-75065795 | MS.gene071983:intron | 30.0% |
| !! | ATAAATGCATTGATTGCTTG+TGG | + | chr2.4:75066311-75066330 | None:intergenic | 30.0% |
| !! | ATTGGCATTTGATGATGAAT+TGG | - | chr2.4:75067217-75067236 | MS.gene071983:intron | 30.0% |
| !! | CATGTTGCTTTAGTATGTTA+TGG | - | chr2.4:75065681-75065700 | MS.gene071983:intron | 30.0% |
| !! | GAAGATGTTGCTTTATTTCT+GGG | - | chr2.4:75066146-75066165 | MS.gene071983:intron | 30.0% |
| !! | TGAAGATGTTGCTTTATTTC+TGG | - | chr2.4:75066145-75066164 | MS.gene071983:intron | 30.0% |
| !!! | GATTTAAGGTGGTTTGTTTT+TGG | - | chr2.4:75066810-75066829 | MS.gene071983:CDS | 30.0% |
| AAATAAGACTACACAAGCAG+AGG | + | chr2.4:75067504-75067523 | None:intergenic | 35.0% | |
| AATGGAGGAGAAAATAATGG+GGG | - | chr2.4:75067020-75067039 | MS.gene071983:intron | 35.0% | |
| ACAAGTTTACACTTGGAATG+AGG | - | chr2.4:75066936-75066955 | MS.gene071983:intron | 35.0% | |
| ACTATAACTCTGTAGTGTAG+CGG | - | chr2.4:75067366-75067385 | MS.gene071983:intron | 35.0% | |
| AGTAGATATATTGACAGCAG+TGG | + | chr2.4:75066539-75066558 | None:intergenic | 35.0% | |
| ATCTCCTTTGTGTAAAGTTC+TGG | + | chr2.4:75066086-75066105 | None:intergenic | 35.0% | |
| ATGTCAACTTGCAACTGTAT+AGG | - | chr2.4:75067342-75067361 | MS.gene071983:intron | 35.0% | |
| ATTGACAACACTGGTCAATA+TGG | - | chr2.4:75067423-75067442 | MS.gene071983:intron | 35.0% | |
| CACAATGTGTTCAATGAAAG+TGG | - | chr2.4:75066485-75066504 | MS.gene071983:intron | 35.0% | |
| CCAACATATATGTCACTAAC+AGG | + | chr2.4:75066705-75066724 | None:intergenic | 35.0% | |
| CCTGTTAGTGACATATATGT+TGG | - | chr2.4:75066702-75066721 | MS.gene071983:intron | 35.0% | |
| CTACTAACAATGAGCTATCT+TGG | - | chr2.4:75067469-75067488 | MS.gene071983:intron | 35.0% | |
| GTAAGATTTGGATTCCAATG+CGG | + | chr2.4:75064244-75064263 | None:intergenic | 35.0% | |
| GTATCTGACAAGTTTACACT+TGG | - | chr2.4:75066929-75066948 | MS.gene071983:intron | 35.0% | |
| GTTTATTTCCATAAGCTCTC+CGG | - | chr2.4:75064783-75064802 | MS.gene071983:intron | 35.0% | |
| TAGATGTACTACAACAAGGT+TGG | - | chr2.4:75067619-75067638 | MS.gene071983:intron | 35.0% | |
| TATCATAGAAAGGGAAGAGA+TGG | + | chr2.4:75067570-75067589 | None:intergenic | 35.0% | |
| TATCCAAGTGCAAGATTCAA+AGG | + | chr2.4:75066435-75066454 | None:intergenic | 35.0% | |
| TATTGACACTGTAGAAACCA+CGG | - | chr2.4:75066836-75066855 | MS.gene071983:CDS | 35.0% | |
| TATTGGGTTTGGATTTAAGG+TGG | - | chr2.4:75066799-75066818 | MS.gene071983:CDS | 35.0% | |
| TTTATTTCCATAAGCTCTCC+GGG | - | chr2.4:75064784-75064803 | MS.gene071983:intron | 35.0% | |
| ! | AAGGACTATTTTCAGTTCCA+AGG | + | chr2.4:75066416-75066435 | None:intergenic | 35.0% |
| ! | AGGACTATTTTCAGTTCCAA+GGG | + | chr2.4:75066415-75066434 | None:intergenic | 35.0% |
| ! | ATCCAAGTTCTACTGTTTCT+AGG | + | chr2.4:75067127-75067146 | None:intergenic | 35.0% |
| ! | TGCCAATTATCACGTTGATT+TGG | + | chr2.4:75067204-75067223 | None:intergenic | 35.0% |
| !! | GCCAATTATCACGTTGATTT+GGG | + | chr2.4:75067203-75067222 | None:intergenic | 35.0% |
| !! | GTTGCAAGTTGACATCATTT+TGG | + | chr2.4:75067337-75067356 | None:intergenic | 35.0% |
| !! | TTGTAGATGGTGGAAAATAG+TGG | + | chr2.4:75067404-75067423 | None:intergenic | 35.0% |
| !! | TTTATTTCTGGGAATGAGTG+AGG | - | chr2.4:75066157-75066176 | MS.gene071983:intron | 35.0% |
| AAAGTAAGCCATTTCTGCGT+GGG | - | chr2.4:75065489-75065508 | MS.gene071983:intron | 40.0% | |
| AGAAAGCAGAAATGAAGCCT+TGG | + | chr2.4:75065211-75065230 | None:intergenic | 40.0% | |
| AGAAGTCAGTCAGTGGAAAA+TGG | - | chr2.4:75067002-75067021 | MS.gene071983:intron | 40.0% | |
| AGTCCTTTGAATCTTGCACT+TGG | - | chr2.4:75066429-75066448 | MS.gene071983:intron | 40.0% | |
| ATATATTGACAGCAGTGGCA+TGG | + | chr2.4:75066534-75066553 | None:intergenic | 40.0% | |
| ATCTACCAAATAGTCTCGCA+AGG | + | chr2.4:75064723-75064742 | None:intergenic | 40.0% | |
| ATTACATCATGTGGCACATG+AGG | + | chr2.4:75066651-75066670 | None:intergenic | 40.0% | |
| CAATTCAAGAAGTCAGTCAG+TGG | - | chr2.4:75066995-75067014 | MS.gene071983:intron | 40.0% | |
| CAGTGGCATGGAATATAACA+AGG | + | chr2.4:75066522-75066541 | None:intergenic | 40.0% | |
| CCAACATGTAATGTCGATGA+AGG | - | chr2.4:75065860-75065879 | MS.gene071983:CDS | 40.0% | |
| CCAGTGTTGTCAATTGTAGA+TGG | + | chr2.4:75067417-75067436 | None:intergenic | 40.0% | |
| CCATCTACAATTGACAACAC+TGG | - | chr2.4:75067414-75067433 | MS.gene071983:intron | 40.0% | |
| CCTTCATCGACATTACATGT+TGG | + | chr2.4:75065863-75065882 | None:intergenic | 40.0% | |
| CTCCTAGAAACAGTAGAACT+TGG | - | chr2.4:75067122-75067141 | MS.gene071983:intron | 40.0% | |
| CTTTGGTTAAGGAACTATGG+TGG | - | chr2.4:75065143-75065162 | MS.gene071983:intron | 40.0% | |
| GCAATTGCAGAAGTTATTGC+AGG | + | chr2.4:75065930-75065949 | None:intergenic | 40.0% | |
| GCCCAAATCAACGTGATAAT+TGG | - | chr2.4:75067199-75067218 | MS.gene071983:intron | 40.0% | |
| GGAAAATTGGTCAACAGCTT+TGG | - | chr2.4:75065126-75065145 | MS.gene071983:intron | 40.0% | |
| GTAAACAAGTCCAACCCAAT+CGG | + | chr2.4:75064690-75064709 | None:intergenic | 40.0% | |
| GTCAAAATTCCGCCAAGTTA+TGG | + | chr2.4:75067278-75067297 | None:intergenic | 40.0% | |
| GTCAATGCTGTGTGGAAAAT+TGG | - | chr2.4:75065113-75065132 | MS.gene071983:intron | 40.0% | |
| GTGTCTCACTTTATTGGGTT+TGG | - | chr2.4:75066788-75066807 | MS.gene071983:CDS | 40.0% | |
| GTGTTGTCAATTGTAGATGG+TGG | + | chr2.4:75067414-75067433 | None:intergenic | 40.0% | |
| TAAACAAGTCCAACCCAATC+GGG | + | chr2.4:75064689-75064708 | None:intergenic | 40.0% | |
| TCCAAAATACTGGTCCTGTT+TGG | + | chr2.4:75064953-75064972 | None:intergenic | 40.0% | |
| TCTACCAAATAGTCTCGCAA+GGG | + | chr2.4:75064722-75064741 | None:intergenic | 40.0% | |
| TGGAATGAGGAGAAAAGAGA+AGG | - | chr2.4:75066949-75066968 | MS.gene071983:intron | 40.0% | |
| TTGCTATGGATGGAAACAAG+TGG | - | chr2.4:75065604-75065623 | MS.gene071983:intron | 40.0% | |
| ! | AAGATAGTGGCATGTTGCTA+TGG | - | chr2.4:75065590-75065609 | MS.gene071983:intron | 40.0% |
| ! | CAGCTTTGGTTAAGGAACTA+TGG | - | chr2.4:75065140-75065159 | MS.gene071983:intron | 40.0% |
| ! | TCCAAACAGGACCAGTATTT+TGG | - | chr2.4:75064949-75064968 | MS.gene071983:intron | 40.0% |
| ! | TTGGTCAACAGCTTTGGTTA+AGG | - | chr2.4:75065132-75065151 | MS.gene071983:intron | 40.0% |
| !! | AACAGGACCAGTATTTTGGA+AGG | - | chr2.4:75064953-75064972 | MS.gene071983:intron | 40.0% |
| !! | ACAGGACCAGTATTTTGGAA+GGG | - | chr2.4:75064954-75064973 | MS.gene071983:intron | 40.0% |
| !! | ACCAGTATTTTGGAAGGGAT+GGG | - | chr2.4:75064959-75064978 | MS.gene071983:intron | 40.0% |
| !! | AGTTCTACTGTTTCTAGGAG+AGG | + | chr2.4:75067122-75067141 | None:intergenic | 40.0% |
| !! | GAATTGGTGTTGTCATTCAG+CGG | - | chr2.4:75067233-75067252 | MS.gene071983:intron | 40.0% |
| !! | GTTCTACTGTTTCTAGGAGA+GGG | + | chr2.4:75067121-75067140 | None:intergenic | 40.0% |
| ACAACACTGGTCAATATGGC+AGG | - | chr2.4:75067427-75067446 | MS.gene071983:intron | 45.0% | |
| ACACTGTAGAAACCACGGTT+TGG | - | chr2.4:75066841-75066860 | MS.gene071983:CDS | 45.0% | |
| AGTCAGTCAGTGGAAAATGG+AGG | - | chr2.4:75067005-75067024 | MS.gene071983:intron | 45.0% | |
| ATCAGCAGTGAAAACCGCAT+TGG | - | chr2.4:75064227-75064246 | MS.gene071983:CDS | 45.0% | |
| ATTTGTGAGACTTGCCCGAT+TGG | - | chr2.4:75064672-75064691 | MS.gene071983:intron | 45.0% | |
| CTGCGATAATCTCATGCTTC+AGG | - | chr2.4:75064281-75064300 | MS.gene071983:CDS | 45.0% | |
| GAAAGTAAGCCATTTCTGCG+TGG | - | chr2.4:75065488-75065507 | MS.gene071983:intron | 45.0% | |
| GAAATGAAGCCTTGGAGTTC+TGG | + | chr2.4:75065203-75065222 | None:intergenic | 45.0% | |
| GAGAGCAGTTGCTGAATTTG+AGG | - | chr2.4:75066883-75066902 | MS.gene071983:CDS | 45.0% | |
| GCTTTAGTGCCATAACTTGG+CGG | - | chr2.4:75067266-75067285 | MS.gene071983:intron | 45.0% | |
| GGCTTCATTTCTGCTTTCTC+AGG | - | chr2.4:75065212-75065231 | MS.gene071983:intron | 45.0% | |
| GGTGCTTTAGTGCCATAACT+TGG | - | chr2.4:75067263-75067282 | MS.gene071983:intron | 45.0% | |
| TAAGCCCTTGCGAGACTATT+TGG | - | chr2.4:75064715-75064734 | MS.gene071983:intron | 45.0% | |
| TAGTGGCATGTTGCTATGGA+TGG | - | chr2.4:75065594-75065613 | MS.gene071983:intron | 45.0% | |
| TGCAGAAGTTATTGCAGGAG+TGG | + | chr2.4:75065925-75065944 | None:intergenic | 45.0% | |
| TTTGTGAGACTTGCCCGATT+GGG | - | chr2.4:75064673-75064692 | MS.gene071983:intron | 45.0% | |
| ! | AGTTTCTGCACTGACACAAC+AGG | + | chr2.4:75067687-75067706 | None:intergenic | 45.0% |
| ! | GAGGAGAAAATAATGGGGGT+GGG | - | chr2.4:75067024-75067043 | MS.gene071983:intron | 45.0% |
| ! | GCAACAGTGCTCGTTTTCTA+TGG | - | chr2.4:75065051-75065070 | MS.gene071983:intron | 45.0% |
| !! | CCAGTATTTTGGAAGGGATG+GGG | - | chr2.4:75064960-75064979 | MS.gene071983:intron | 45.0% |
| !! | GACCAGTATTTTGGAAGGGA+TGG | - | chr2.4:75064958-75064977 | MS.gene071983:intron | 45.0% |
| !! | TAATGTCGATGAAGGTGCCA+TGG | - | chr2.4:75065868-75065887 | MS.gene071983:CDS | 45.0% |
| !! | TATTTTGGAAGGGATGGGGT+TGG | - | chr2.4:75064964-75064983 | MS.gene071983:intron | 45.0% |
| !! | TCCACACAGCATTGACTTCA+GGG | + | chr2.4:75065109-75065128 | None:intergenic | 45.0% |
| !! | TTCCACACAGCATTGACTTC+AGG | + | chr2.4:75065110-75065129 | None:intergenic | 45.0% |
| !!! | GTGTTGCTTTTCACGACGAA+TGG | - | chr2.4:75064410-75064429 | MS.gene071983:intron | 45.0% |
| AAGCAATCCCGGAGAGCTTA+TGG | + | chr2.4:75064794-75064813 | None:intergenic | 50.0% | |
| ACCCTGAAGTCAATGCTGTG+TGG | - | chr2.4:75065105-75065124 | MS.gene071983:intron | 50.0% | |
| ACTACAACAAGGTTGGACCG+TGG | - | chr2.4:75067626-75067645 | MS.gene071983:intron | 50.0% | |
| AGCCAGAAGATGAACAGCGT+AGG | + | chr2.4:75064437-75064456 | None:intergenic | 50.0% | |
| CCCCATCCCTTCCAAAATAC+TGG | + | chr2.4:75064963-75064982 | None:intergenic | 50.0% | |
| CTGGACTCCACTCAAAACCA+CGG | + | chr2.4:75065184-75065203 | None:intergenic | 50.0% | |
| CTTCACAGTAAGCATCCGAG+AGG | + | chr2.4:75067658-75067677 | None:intergenic | 50.0% | |
| GACTTAATCGCGTATCGCTG+GGG | + | chr2.4:75067315-75067334 | None:intergenic | 50.0% | |
| GCCAGAAGATGAACAGCGTA+GGG | + | chr2.4:75064436-75064455 | None:intergenic | 50.0% | |
| GGACTTAATCGCGTATCGCT+GGG | + | chr2.4:75067316-75067335 | None:intergenic | 50.0% | |
| GTCAGCTGTTGCAATTTGCG+AGG | + | chr2.4:75067714-75067733 | None:intergenic | 50.0% | |
| GTCGTGAAAAGCAACACCGT+CGG | + | chr2.4:75064407-75064426 | None:intergenic | 50.0% | |
| TAATGGGGGTGGGAACCAAA+AGG | - | chr2.4:75067034-75067053 | MS.gene071983:intron | 50.0% | |
| TATCCTTTCTCGACGACCCT+TGG | - | chr2.4:75066396-75066415 | MS.gene071983:intron | 50.0% | |
| TGGACTTAATCGCGTATCGC+TGG | + | chr2.4:75067317-75067336 | None:intergenic | 50.0% | |
| TTGTCATTCAGCGGCTATCG+TGG | - | chr2.4:75067242-75067261 | MS.gene071983:intron | 50.0% | |
| ! | GAACTATGGTGGAGTGCATG+AGG | - | chr2.4:75065154-75065173 | MS.gene071983:intron | 50.0% |
| ! | GGAGGAGAAAATAATGGGGG+TGG | - | chr2.4:75067023-75067042 | MS.gene071983:intron | 50.0% |
| CACTGGTCAATATGGCAGGC+TGG | - | chr2.4:75067431-75067450 | MS.gene071983:intron | 55.0% | |
| GAGTGGAGTCCAGAACTCCA+AGG | - | chr2.4:75065191-75065210 | MS.gene071983:intron | 55.0% | |
| GCCCTACGCTGTTCATCTTC+TGG | - | chr2.4:75064432-75064451 | MS.gene071983:intron | 55.0% | |
| GGGTCGTCGAGAAAGGATAG+AGG | + | chr2.4:75066395-75066414 | None:intergenic | 55.0% | |
| GTATCGCTGGGGAGCAATAG+CGG | + | chr2.4:75067304-75067323 | None:intergenic | 55.0% | |
| GTGATCGTCCCACGCAGAAA+TGG | + | chr2.4:75065500-75065519 | None:intergenic | 55.0% | |
| GTTCCAAGGGTCGTCGAGAA+AGG | + | chr2.4:75066402-75066421 | None:intergenic | 55.0% | |
| TGAGACTTGCCCGATTGGGT+TGG | - | chr2.4:75064677-75064696 | MS.gene071983:intron | 55.0% | |
| ! | CTATGGTGGAGTGCATGAGG+CGG | - | chr2.4:75065157-75065176 | MS.gene071983:intron | 55.0% |
| !! | CATCCGAGAGGCATTGTCCA+CGG | + | chr2.4:75067646-75067665 | None:intergenic | 55.0% |
| GGACCGTGGACAATGCCTCT+CGG | - | chr2.4:75067640-75067659 | MS.gene071983:intron | 60.0% | |
| ! | CTCACTCAGGTTGCTGCCGA+CGG | - | chr2.4:75064388-75064407 | MS.gene071983:intron | 60.0% |
| !!! | AGGCGGTCCGTGGTTTTGAG+TGG | - | chr2.4:75065174-75065193 | MS.gene071983:intron | 60.0% |
| GGAGTGCATGAGGCGGTCCG+TGG | - | chr2.4:75065164-75065183 | MS.gene071983:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 75064219 | 75067761 | 75064219 | ID=MS.gene071983 |
| chr2.4 | mRNA | 75064219 | 75067761 | 75064219 | ID=MS.gene071983.t1;Parent=MS.gene071983 |
| chr2.4 | exon | 75067678 | 75067761 | 75067678 | ID=MS.gene071983.t1.exon1;Parent=MS.gene071983.t1 |
| chr2.4 | CDS | 75067678 | 75067761 | 75067678 | ID=cds.MS.gene071983.t1;Parent=MS.gene071983.t1 |
| chr2.4 | exon | 75067504 | 75067583 | 75067504 | ID=MS.gene071983.t1.exon2;Parent=MS.gene071983.t1 |
| chr2.4 | CDS | 75067504 | 75067583 | 75067504 | ID=cds.MS.gene071983.t1;Parent=MS.gene071983.t1 |
| chr2.4 | exon | 75066747 | 75066928 | 75066747 | ID=MS.gene071983.t1.exon3;Parent=MS.gene071983.t1 |
| chr2.4 | CDS | 75066747 | 75066928 | 75066747 | ID=cds.MS.gene071983.t1;Parent=MS.gene071983.t1 |
| chr2.4 | exon | 75065786 | 75065893 | 75065786 | ID=MS.gene071983.t1.exon4;Parent=MS.gene071983.t1 |
| chr2.4 | CDS | 75065786 | 75065893 | 75065786 | ID=cds.MS.gene071983.t1;Parent=MS.gene071983.t1 |
| chr2.4 | exon | 75064219 | 75064358 | 75064219 | ID=MS.gene071983.t1.exon5;Parent=MS.gene071983.t1 |
| chr2.4 | CDS | 75064219 | 75064358 | 75064219 | ID=cds.MS.gene071983.t1;Parent=MS.gene071983.t1 |
| Gene Sequence |
| Protein sequence |
