AlfalfaGEDB | MS.gene051330

M. sativa cultivar XinJiangDaYe / MS.gene051330

KEGG: K02929
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00935.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051330.t1	XP_003593138.1	100	105	0	0	1	105	1	105	6.00E-53	216.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051330.t1	Q96499	97.1	105	3	0	1	105	1	105	2.1e-54	212.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051330.t1	A0A2K3MQ78	100.0	105	0	0	1	105	1	105	4.3e-53	216.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050277	MS.gene051330	0.850033	2.21E-60	-1.69E-46
MS.gene050290	MS.gene051330	0.823716	1.19E-53	-1.69E-46
MS.gene050303	MS.gene051330	0.802479	5.50E-49	-1.69E-46
MS.gene050320	MS.gene051330	0.804914	1.72E-49	-1.69E-46
MS.gene050916	MS.gene051330	0.854958	8.70E-62	-1.69E-46
MS.gene051063	MS.gene051330	0.818103	2.33E-52	-1.69E-46
MS.gene051330	MS.gene051903	0.870501	1.39E-66	-1.69E-46
MS.gene051330	MS.gene052947	0.856613	2.86E-62	-1.69E-46
MS.gene051330	MS.gene053952	0.806154	9.44E-50	-1.69E-46
MS.gene051330	MS.gene055808	0.82899	6.61E-55	-1.69E-46
MS.gene051330	MS.gene056075	0.822167	2.74E-53	-1.69E-46
MS.gene051330	MS.gene056091	0.832774	7.80E-56	-1.69E-46
MS.gene051330	MS.gene056601	0.822072	2.88E-53	-1.69E-46
MS.gene051330	MS.gene056631	0.876852	1.00E-68	-1.69E-46
MS.gene051330	MS.gene057094	0.837642	4.61E-57	-1.69E-46
MS.gene051330	MS.gene058238	0.83434	3.17E-56	-1.69E-46
MS.gene051330	MS.gene058354	0.816836	4.50E-52	-1.69E-46
MS.gene051330	MS.gene058906	0.822107	2.83E-53	-1.69E-46
MS.gene051330	MS.gene06001	0.909076	8.49E-82	-1.69E-46
MS.gene051330	MS.gene060429	0.847772	9.36E-60	-1.69E-46
MS.gene051330	MS.gene061145	0.80256	5.29E-49	-1.69E-46
MS.gene051330	MS.gene06172	0.817192	3.75E-52	-1.69E-46
MS.gene051330	MS.gene063817	0.805353	1.39E-49	-1.69E-46
MS.gene051330	MS.gene064071	0.801141	1.04E-48	-1.69E-46
MS.gene051330	MS.gene064072	0.801397	9.18E-49	-1.69E-46
MS.gene051330	MS.gene065715	0.812787	3.56E-51	-1.69E-46
MS.gene051330	MS.gene065998	0.830837	2.34E-55	-1.69E-46
MS.gene051330	MS.gene066034	0.837507	4.99E-57	-1.69E-46
MS.gene051330	MS.gene066035	0.859429	4.16E-63	-1.69E-46
MS.gene051330	MS.gene066194	0.808756	2.65E-50	-1.69E-46
MS.gene051330	MS.gene066455	0.817536	3.13E-52	-1.69E-46
MS.gene051330	MS.gene06667	0.806869	6.67E-50	-1.69E-46
MS.gene051330	MS.gene067521	0.836339	9.91E-57	-1.69E-46
MS.gene051330	MS.gene068255	0.813268	2.79E-51	-1.69E-46
MS.gene051330	MS.gene068553	0.814682	1.36E-51	-1.69E-46
MS.gene051330	MS.gene069310	0.854497	1.18E-61	-1.69E-46
MS.gene051330	MS.gene06984	0.81915	1.35E-52	-1.69E-46
MS.gene051330	MS.gene06989	0.846109	2.67E-59	-1.69E-46
MS.gene051330	MS.gene069962	0.828841	7.18E-55	-1.69E-46
MS.gene051330	MS.gene070271	0.826527	2.58E-54	-1.69E-46
MS.gene051330	MS.gene070599	0.840397	8.91E-58	-1.69E-46
MS.gene051330	MS.gene07100	0.80887	2.50E-50	-1.69E-46
MS.gene051330	MS.gene071173	0.848799	4.87E-60	-1.69E-46
MS.gene051330	MS.gene071364	0.801687	8.00E-49	-1.69E-46
MS.gene051330	MS.gene071366	0.833812	4.30E-56	-1.69E-46
MS.gene051330	MS.gene071958	0.824355	8.44E-54	-1.69E-46
MS.gene051330	MS.gene071983	0.813578	2.38E-51	-1.69E-46
MS.gene051330	MS.gene071987	0.831946	1.25E-55	-1.69E-46
MS.gene051330	MS.gene072057	0.873391	1.53E-67	-1.69E-46
MS.gene051330	MS.gene07217	0.819621	1.06E-52	-1.69E-46
MS.gene051330	MS.gene07222	0.893187	7.94E-75	-1.69E-46
MS.gene051330	MS.gene072508	0.83767	4.53E-57	-1.69E-46
MS.gene051330	MS.gene072782	0.815545	8.75E-52	-1.69E-46
MS.gene051330	MS.gene073332	0.8564	3.30E-62	-1.69E-46
MS.gene051330	MS.gene073564	0.813293	2.75E-51	-1.69E-46
MS.gene051330	MS.gene073785	0.836669	8.17E-57	-1.69E-46
MS.gene051330	MS.gene073827	0.808853	2.53E-50	-1.69E-46
MS.gene051330	MS.gene074465	0.808101	3.65E-50	-1.69E-46
MS.gene051330	MS.gene074594	0.807745	4.35E-50	-1.69E-46
MS.gene051330	MS.gene07552	0.812244	4.67E-51	-1.69E-46
MS.gene051330	MS.gene07719	0.837273	5.73E-57	-1.69E-46
MS.gene051330	MS.gene09032	0.825951	3.54E-54	-1.69E-46
MS.gene051330	MS.gene20280	0.805192	1.50E-49	-1.69E-46
MS.gene051330	MS.gene20740	0.891534	3.64E-74	-1.69E-46
MS.gene051330	MS.gene21219	0.83941	1.61E-57	-1.69E-46
MS.gene051330	MS.gene22968	0.844415	7.67E-59	-1.69E-46
MS.gene051330	MS.gene22983	0.801123	1.04E-48	-1.69E-46
MS.gene051330	MS.gene23058	0.873869	1.05E-67	-1.69E-46
MS.gene051330	MS.gene23059	0.889002	3.58E-73	-1.69E-46
MS.gene051330	MS.gene23491	0.842351	2.73E-58	-1.69E-46
MS.gene051330	MS.gene23954	0.855307	6.89E-62	-1.69E-46
MS.gene051330	MS.gene23983	0.817496	3.20E-52	-1.69E-46
MS.gene051330	MS.gene24260	0.824064	9.88E-54	-1.69E-46
MS.gene051330	MS.gene24483	0.826502	2.62E-54	-1.69E-46
MS.gene051330	MS.gene24492	0.803271	3.77E-49	-1.69E-46
MS.gene051330	MS.gene24692	0.82122	4.53E-53	-1.69E-46
MS.gene051330	MS.gene24706	0.827185	1.80E-54	-1.69E-46
MS.gene051330	MS.gene24846	0.808128	3.61E-50	-1.69E-46
MS.gene051330	MS.gene24847	0.804019	2.64E-49	-1.69E-46
MS.gene051330	MS.gene24930	0.857126	2.02E-62	-1.69E-46
MS.gene051330	MS.gene25077	0.81092	9.07E-51	-1.69E-46
MS.gene051330	MS.gene26979	0.821464	3.98E-53	-1.69E-46
MS.gene051330	MS.gene27687	0.838985	2.08E-57	-1.69E-46
MS.gene051330	MS.gene27879	0.859591	3.72E-63	-1.69E-46
MS.gene051330	MS.gene27991	0.817938	2.54E-52	-1.69E-46
MS.gene051330	MS.gene28323	0.833339	5.65E-56	-1.69E-46
MS.gene051330	MS.gene29581	0.869398	3.19E-66	-1.69E-46
MS.gene051330	MS.gene30863	0.823337	1.46E-53	-1.69E-46
MS.gene051330	MS.gene30904	0.864443	1.21E-64	-1.69E-46
MS.gene051330	MS.gene31405	0.831331	1.77E-55	-1.69E-46
MS.gene051330	MS.gene31468	0.824739	6.86E-54	-1.69E-46
MS.gene051330	MS.gene33384	0.852222	5.32E-61	-1.69E-46
MS.gene051330	MS.gene35046	0.893117	8.47E-75	-1.69E-46
MS.gene051330	MS.gene35135	0.824556	7.57E-54	-1.69E-46
MS.gene051330	MS.gene35214	0.817451	3.28E-52	-1.69E-46
MS.gene051330	MS.gene35379	0.878362	2.99E-69	-1.69E-46
MS.gene051330	MS.gene36468	0.880507	5.19E-70	-1.69E-46
MS.gene051330	MS.gene37341	0.820687	6.01E-53	-1.69E-46
MS.gene051330	MS.gene39207	0.847363	1.21E-59	-1.69E-46
MS.gene051330	MS.gene40648	0.855002	8.45E-62	-1.69E-46
MS.gene051330	MS.gene41171	0.853089	3.01E-61	-1.69E-46
MS.gene051330	MS.gene41455	0.821264	4.43E-53	-1.69E-46
MS.gene051330	MS.gene41901	0.813595	2.36E-51	-1.69E-46
MS.gene051330	MS.gene41902	0.809847	1.55E-50	-1.69E-46
MS.gene051330	MS.gene42247	0.843001	1.83E-58	-1.69E-46
MS.gene051330	MS.gene43992	0.849885	2.43E-60	-1.69E-46
MS.gene051330	MS.gene44023	0.866692	2.37E-65	-1.69E-46
MS.gene051330	MS.gene44141	0.847219	1.33E-59	-1.69E-46
MS.gene051330	MS.gene44165	0.808813	2.58E-50	-1.69E-46
MS.gene051330	MS.gene46488	0.830482	2.86E-55	-1.69E-46
MS.gene051330	MS.gene46489	0.823539	1.31E-53	-1.69E-46
MS.gene051330	MS.gene46491	0.802774	4.78E-49	-1.69E-46
MS.gene051330	MS.gene47819	0.838032	3.66E-57	-1.69E-46
MS.gene051330	MS.gene47955	0.812274	4.60E-51	-1.69E-46
MS.gene051330	MS.gene51106	-0.807409	5.13E-50	-1.69E-46
MS.gene051330	MS.gene51111	0.826335	2.87E-54	-1.69E-46
MS.gene051330	MS.gene51560	0.804501	2.10E-49	-1.69E-46
MS.gene051330	MS.gene55732	0.908435	1.72E-81	-1.69E-46
MS.gene051330	MS.gene55887	0.817437	3.30E-52	-1.69E-46
MS.gene051330	MS.gene55988	0.817052	4.03E-52	-1.69E-46
MS.gene051330	MS.gene56166	0.826155	3.17E-54	-1.69E-46
MS.gene051330	MS.gene56253	0.804157	2.47E-49	-1.69E-46
MS.gene051330	MS.gene57210	0.838424	2.90E-57	-1.69E-46
MS.gene051330	MS.gene57462	0.80743	5.07E-50	-1.69E-46
MS.gene051330	MS.gene57991	0.809059	2.28E-50	-1.69E-46
MS.gene051330	MS.gene58215	0.856247	3.66E-62	-1.69E-46
MS.gene051330	MS.gene58227	0.805007	1.64E-49	-1.69E-46
MS.gene051330	MS.gene58693	0.831862	1.31E-55	-1.69E-46
MS.gene051330	MS.gene58719	0.803369	3.60E-49	-1.69E-46
MS.gene051330	MS.gene58776	0.852383	4.79E-61	-1.69E-46
MS.gene051330	MS.gene60093	0.817098	3.93E-52	-1.69E-46
MS.gene051330	MS.gene60259	0.819277	1.26E-52	-1.69E-46
MS.gene051330	MS.gene60261	0.813185	2.91E-51	-1.69E-46
MS.gene051330	MS.gene60717	0.830255	3.25E-55	-1.69E-46
MS.gene051330	MS.gene61543	0.858281	9.18E-63	-1.69E-46
MS.gene051330	MS.gene61679	0.814236	1.71E-51	-1.69E-46
MS.gene051330	MS.gene62558	0.845598	3.68E-59	-1.69E-46
MS.gene051330	MS.gene62563	0.801332	9.47E-49	-1.69E-46
MS.gene051330	MS.gene62834	0.849691	2.75E-60	-1.69E-46
MS.gene051330	MS.gene65076	0.849035	4.19E-60	-1.69E-46
MS.gene051330	MS.gene66089	0.821352	4.23E-53	-1.69E-46
MS.gene051330	MS.gene66475	0.809405	1.92E-50	-1.69E-46
MS.gene051330	MS.gene67884	0.821312	4.32E-53	-1.69E-46
MS.gene051330	MS.gene69262	0.802463	5.54E-49	-1.69E-46
MS.gene051330	MS.gene69921	0.862077	6.54E-64	-1.69E-46
MS.gene051330	MS.gene69947	0.845896	3.05E-59	-1.69E-46
MS.gene051330	MS.gene71825	0.820718	5.91E-53	-1.69E-46
MS.gene051330	MS.gene71826	0.818478	1.92E-52	-1.69E-46
MS.gene051330	MS.gene71949	0.865576	5.34E-65	-1.69E-46
MS.gene051330	MS.gene72285	0.843233	1.59E-58	-1.69E-46
MS.gene051330	MS.gene72612	0.80236	5.82E-49	-1.69E-46
MS.gene051330	MS.gene72894	0.847843	8.95E-60	-1.69E-46
MS.gene051330	MS.gene73825	0.827643	1.40E-54	-1.69E-46
MS.gene051330	MS.gene74076	0.80254	5.35E-49	-1.69E-46
MS.gene051330	MS.gene74854	0.813278	2.78E-51	-1.69E-46
MS.gene051330	MS.gene75171	0.820954	5.22E-53	-1.69E-46
MS.gene051330	MS.gene75187	0.820013	8.58E-53	-1.69E-46
MS.gene051330	MS.gene75477	0.810064	1.39E-50	-1.69E-46
MS.gene051330	MS.gene75625	0.877547	5.76E-69	-1.69E-46
MS.gene051330	MS.gene76035	0.801603	8.33E-49	-1.69E-46
MS.gene051330	MS.gene76118	-0.809819	1.57E-50	-1.69E-46
MS.gene051330	MS.gene76248	0.807673	4.51E-50	-1.69E-46
MS.gene051330	MS.gene76576	0.860656	1.77E-63	-1.69E-46
MS.gene051330	MS.gene77160	0.869103	3.98E-66	-1.69E-46
MS.gene051330	MS.gene77163	0.876349	1.50E-68	-1.69E-46
MS.gene051330	MS.gene77282	0.844455	7.48E-59	-1.69E-46
MS.gene051330	MS.gene77391	0.817512	3.17E-52	-1.69E-46
MS.gene051330	MS.gene81001	0.808617	2.84E-50	-1.69E-46
MS.gene051330	MS.gene81493	0.866867	2.08E-65	-1.69E-46
MS.gene051330	MS.gene82767	0.840621	7.79E-58	-1.69E-46
MS.gene051330	MS.gene83217	0.842193	3.00E-58	-1.69E-46
MS.gene051330	MS.gene83218	0.83529	1.83E-56	-1.69E-46
MS.gene051330	MS.gene83961	0.867419	1.39E-65	-1.69E-46
MS.gene051330	MS.gene84316	0.805896	1.07E-49	-1.69E-46
MS.gene051330	MS.gene84455	0.855564	5.80E-62	-1.69E-46
MS.gene051330	MS.gene85108	0.858169	9.91E-63	-1.69E-46
MS.gene051330	MS.gene85110	0.845212	4.68E-59	-1.69E-46
MS.gene051330	MS.gene85186	0.810884	9.23E-51	-1.69E-46
MS.gene051330	MS.gene86392	0.853605	2.14E-61	-1.69E-46
MS.gene051330	MS.gene88371	0.832	1.21E-55	-1.69E-46
MS.gene051330	MS.gene88427	0.84696	1.56E-59	-1.69E-46
MS.gene051330	MS.gene88733	0.823386	1.42E-53	-1.69E-46
MS.gene051330	MS.gene89027	0.857445	1.62E-62	-1.69E-46
MS.gene051330	MS.gene89562	0.874231	7.94E-68	-1.69E-46
MS.gene051330	MS.gene89721	0.89998	1.16E-77	-1.69E-46
MS.gene051330	MS.gene90833	0.812093	5.04E-51	-1.69E-46
MS.gene051330	MS.gene91622	0.828195	1.03E-54	-1.69E-46
MS.gene051330	MS.gene92557	0.806011	1.01E-49	-1.69E-46
MS.gene051330	MS.gene92572	0.839291	1.73E-57	-1.69E-46
MS.gene051330	MS.gene92970	0.835983	1.22E-56	-1.69E-46
MS.gene051330	MS.gene95469	0.81723	3.67E-52	-1.69E-46
MS.gene051330	MS.gene96322	0.861107	1.29E-63	-1.69E-46
MS.gene051330	MS.gene96338	0.811249	7.69E-51	-1.69E-46
MS.gene051330	MS.gene97008	0.830093	3.57E-55	-1.69E-46
MS.gene051330	MS.gene97932	0.804315	2.29E-49	-1.69E-46
MS.gene051330	MS.gene98436	0.852966	3.26E-61	-1.69E-46
MS.gene051330	MS.gene98889	0.818247	2.17E-52	-1.69E-46
MS.gene051330	MS.gene99657	0.829234	5.77E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene002165	MS.gene051330	PPI
MS.gene051330	MS.gene01133	PPI
MS.gene051330	MS.gene071958	PPI
MS.gene047093	MS.gene051330	PPI
MS.gene051330	MS.gene028410	PPI
MS.gene70395	MS.gene051330	PPI
MS.gene051330	MS.gene35046	PPI

Query id	Subject id	identity %	alignment length	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051330.t1	MTR_7g100280	100.000	105	1	105	1	105	1.57e-71	208
MS.gene051330.t1	MTR_4g094308	100.000	105	1	105	1	105	1.57e-71	208
MS.gene051330.t1	MTR_2g008180	100.000	105	1	105	1	105	1.57e-71	208

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051330.t1	AT4G14320	92.381	105	8	1	105	1	105	1.00e-66	196
MS.gene051330.t1	AT3G23390	92.381	105	8	1	105	1	105	1.00e-66	196
MS.gene051330.t1	AT4G14320	91.398	93	8	1	93	1	93	3.30e-57	174

Find 18 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAGTTACCCAATACAAAA+AGG	0.271604	4.1:-19333196	MS.gene051330:CDS
TGTTTCACAACACGCAATTA+AGG	0.365888	4.1:-19332921	MS.gene051330:intron
CAAACCCGTCTTTCACAAAA+AGG	0.369511	4.1:-19333103	MS.gene051330:intron
TAAAGATTCCATCGCTGCTC+AGG	0.399194	4.1:-19333172	MS.gene051330:CDS
CGTTATGACCGCAAACAATC+TGG	0.415551	4.1:-19333141	MS.gene051330:CDS
GTATTGGGTAACTTTGTGTA+AGG	0.453756	4.1:+19333203	None:intergenic
CACCATAACCAGATTGTTTG+CGG	0.454458	4.1:+19333133	None:intergenic
GACCGCAAACAATCTGGTTA+TGG	0.454865	4.1:-19333135	MS.gene051330:CDS
AGGTGCAAGCACTTTGAGAT+TGG	0.462716	4.1:-19332817	MS.gene051330:CDS
TGCAAGCACTTTGAGATTGG+TGG	0.497179	4.1:-19332814	MS.gene051330:CDS
CGCAAACAATCTGGTTATGG+TGG	0.541862	4.1:-19333132	MS.gene051330:CDS
TGAGATTGGTGGCGACAAGA+AGG	0.552379	4.1:-19332803	MS.gene051330:CDS
GAGATTGGTGGCGACAAGAA+GGG	0.552573	4.1:-19332802	MS.gene051330:CDS
GGTGGCGACAAGAAGGGAAA+AGG	0.559082	4.1:-19332796	MS.gene051330:CDS
CTACTAAGAAAATTGTGTTG+AGG	0.599248	4.1:-19332967	MS.gene051330:CDS
AAAGATTCCATCGCTGCTCA+GGG	0.607025	4.1:-19333171	MS.gene051330:CDS
GAAAACCTACTGCAAAAGCA+AGG	0.613372	4.1:-19333241	MS.gene051330:CDS
GTGTTGAGGCTTCAGTGTCA+AGG	0.618711	4.1:-19332953	MS.gene051330:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTCAATTTTTGTTGTTAT+AGG	-	chr4.1:19332873-19332892	MS.gene051330:intron	15.0%
!!!	ATAAATGAAATTGTTGATAA+TGG	+	chr4.1:19332831-19332850	None:intergenic	15.0%
!!	ATCAAATTAAGAAAAACAGA+AGG	+	chr4.1:19333106-19333125	None:intergenic	20.0%
!	AAAGTTACCCAATACAAAAA+GGG	-	chr4.1:19332961-19332980	MS.gene051330:CDS	25.0%
!	TATTGTTGTGTGTTTGAATT+AGG	-	chr4.1:19333160-19333179	MS.gene051330:CDS	25.0%
!!	AATCTTTACCCTTTTTGTAT+TGG	+	chr4.1:19332972-19332991	None:intergenic	25.0%
!!	ATCTTTACCCTTTTTGTATT+GGG	+	chr4.1:19332971-19332990	None:intergenic	25.0%
!!!	GTGTAATTTGTTCTGATTTT+GGG	-	chr4.1:19333278-19333297	MS.gene051330:intron	25.0%
!!!	TGTGTAATTTGTTCTGATTT+TGG	-	chr4.1:19333277-19333296	MS.gene051330:intron	25.0%
	AAACAGAAGGTAAAGACTTA+AGG	+	chr4.1:19333093-19333112	None:intergenic	30.0%
	CAAAGTTACCCAATACAAAA+AGG	-	chr4.1:19332960-19332979	MS.gene051330:CDS	30.0%
	CTACTAAGAAAATTGTGTTG+AGG	-	chr4.1:19333189-19333208	MS.gene051330:CDS	30.0%
!	TTGTACCTTTTTGTGAAAGA+CGG	+	chr4.1:19333061-19333080	None:intergenic	30.0%
	GTATTGGGTAACTTTGTGTA+AGG	+	chr4.1:19332956-19332975	None:intergenic	35.0%
	TGTTTCACAACACGCAATTA+AGG	-	chr4.1:19333235-19333254	MS.gene051330:CDS	35.0%
!	CAGTAGGTTTTCTTTGTCTT+TGG	+	chr4.1:19332907-19332926	None:intergenic	35.0%
!	TGTACCTTTTTGTGAAAGAC+GGG	+	chr4.1:19333060-19333079	None:intergenic	35.0%
!!	GATAATGGATGAAAGTGTTG+TGG	+	chr4.1:19332816-19332835	None:intergenic	35.0%
!!	GTTTTTGTTTGTGTTTGCAG+AGG	-	chr4.1:19333319-19333338	MS.gene051330:intron	35.0%
	CAAACCCGTCTTTCACAAAA+AGG	-	chr4.1:19333053-19333072	MS.gene051330:intron	40.0%
	CACCATAACCAGATTGTTTG+CGG	+	chr4.1:19333026-19333045	None:intergenic	40.0%
	GAAAACCTACTGCAAAAGCA+AGG	-	chr4.1:19332915-19332934	MS.gene051330:intron	40.0%
	TGTTGTGGAAGGTTAGATGA+GGG	+	chr4.1:19332801-19332820	None:intergenic	40.0%
!!	ATGGATGAAAGTGTTGTGGA+AGG	+	chr4.1:19332812-19332831	None:intergenic	40.0%
!!	CTTTTTGTGAAAGACGGGTT+TGG	+	chr4.1:19333055-19333074	None:intergenic	40.0%
!!!	ATTTTGGGTTCTGTGGGTAA+TGG	-	chr4.1:19333293-19333312	MS.gene051330:intron	40.0%
!!!	GTTCTGATTTTGGGTTCTGT+GGG	-	chr4.1:19333287-19333306	MS.gene051330:intron	40.0%
!!!	TGTTCTGATTTTGGGTTCTG+TGG	-	chr4.1:19333286-19333305	MS.gene051330:intron	40.0%
!!!	TTTTGGGTTCTGTGGGTAAT+GGG	-	chr4.1:19333294-19333313	MS.gene051330:intron	40.0%
	AAAGATTCCATCGCTGCTCA+GGG	-	chr4.1:19332985-19333004	MS.gene051330:intron	45.0%
	CGCAAACAATCTGGTTATGG+TGG	-	chr4.1:19333024-19333043	MS.gene051330:intron	45.0%
	CGTTATGACCGCAAACAATC+TGG	-	chr4.1:19333015-19333034	MS.gene051330:intron	45.0%
	GACCGCAAACAATCTGGTTA+TGG	-	chr4.1:19333021-19333040	MS.gene051330:intron	45.0%
	GTGTTGTGGAAGGTTAGATG+AGG	+	chr4.1:19332802-19332821	None:intergenic	45.0%
	TAAAGATTCCATCGCTGCTC+AGG	-	chr4.1:19332984-19333003	MS.gene051330:intron	45.0%
!!	AGGTGCAAGCACTTTGAGAT+TGG	-	chr4.1:19333339-19333358	MS.gene051330:intron	45.0%
!!	TGCAAGCACTTTGAGATTGG+TGG	-	chr4.1:19333342-19333361	MS.gene051330:intron	45.0%
	GTGTTGAGGCTTCAGTGTCA+AGG	-	chr4.1:19333203-19333222	MS.gene051330:CDS	50.0%
!!	GAGATTGGTGGCGACAAGAA+GGG	-	chr4.1:19333354-19333373	MS.gene051330:intron	50.0%
!!	GCACTCCTTGCTTTTGCAGT+AGG	+	chr4.1:19332923-19332942	None:intergenic	50.0%
!!	TGAGATTGGTGGCGACAAGA+AGG	-	chr4.1:19333353-19333372	MS.gene051330:intron	50.0%
	GGTGGCGACAAGAAGGGAAA+AGG	-	chr4.1:19333360-19333379	MS.gene051330:intron	55.0%
!	ACGTTTTCCCTGAGCAGCGA+TGG	+	chr4.1:19332995-19333014	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	19332780	19333398	19332780	ID=MS.gene051330
chr4.1	mRNA	19332780	19333398	19332780	ID=MS.gene051330.t1;Parent=MS.gene051330
chr4.1	exon	19333396	19333398	19333396	ID=MS.gene051330.t1.exon1;Parent=MS.gene051330.t1
chr4.1	CDS	19333396	19333398	19333396	ID=cds.MS.gene051330.t1;Parent=MS.gene051330.t1
chr4.1	exon	19333104	19333283	19333104	ID=MS.gene051330.t1.exon2;Parent=MS.gene051330.t1
chr4.1	CDS	19333104	19333283	19333104	ID=cds.MS.gene051330.t1;Parent=MS.gene051330.t1
chr4.1	exon	19332922	19332996	19332922	ID=MS.gene051330.t1.exon3;Parent=MS.gene051330.t1
chr4.1	CDS	19332922	19332996	19332922	ID=cds.MS.gene051330.t1;Parent=MS.gene051330.t1
chr4.1	exon	19332780	19332839	19332780	ID=MS.gene051330.t1.exon4;Parent=MS.gene051330.t1
chr4.1	CDS	19332780	19332839	19332780	ID=cds.MS.gene051330.t1;Parent=MS.gene051330.t1

Gene Sequence

>MS.gene051330

ATGGTAAACTACTCATTTCCCTCATCTAACCTTCCACAACACTTTCATCCATTATCAACAATTTCATTTATAGATCTCACTTTATGTCAAATTAATTCAATTTTTGTTGTTATAGGTGAACGTTCCAAAGACAAAGAAAACCTACTGCAAAAGCAAGGAGTGCAAGAAGCACACCTTACACAAAGTTACCCAATACAAAAAGGGTAAAGATTCCATCGCTGCTCAGGGAAAACGTCGTTATGACCGCAAACAATCTGGTTATGGTGGACAGACCAAACCCGTCTTTCACAAAAAGGTACAATTGCTGTTACCTTAAGTCTTTACCTTCTGTTTTTCTTAATTTGATTAGTAATTAAGATGTTAATTAAGTTATTTGTTTTTATTGTTGTGTGTTTGAATTAGGCAAAAACTACTAAGAAAATTGTGTTGAGGCTTCAGTGTCAAGGTTGCAAGCATGTTTCACAACACGCAATTAAGGTAAGCGTGTTTGTTTTTGTTGTGTAATTTGTTCTGATTTTGGGTTCTGTGGGTAATGGGATGTTTTTGTTTGTGTTTGCAGAGGTGCAAGCACTTTGAGATTGGTGGCGACAAGAAGGGAAAAGGAACATCTCTGTTTTAG

Protein sequence

>MS.gene051330.t1

MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF