Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061145.t1 | XP_003606815.2 | 94 | 67 | 4 | 0 | 1 | 67 | 1 | 67 | 8.20E-27 | 129 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061145.t1 | O22860 | 89.6 | 67 | 7 | 0 | 1 | 67 | 1 | 67 | 4.9e-28 | 124.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061145.t1 | G7JEV4 | 94.0 | 67 | 4 | 0 | 1 | 67 | 1 | 67 | 5.9e-27 | 129.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050277 | MS.gene061145 | 0.840436 | 8.71E-58 | -1.69E-46 |
MS.gene050290 | MS.gene061145 | 0.831225 | 1.88E-55 | -1.69E-46 |
MS.gene050320 | MS.gene061145 | 0.82945 | 5.11E-55 | -1.69E-46 |
MS.gene050838 | MS.gene061145 | 0.80662 | 7.53E-50 | -1.69E-46 |
MS.gene051063 | MS.gene061145 | 0.81028 | 1.25E-50 | -1.69E-46 |
MS.gene051330 | MS.gene061145 | 0.80256 | 5.29E-49 | -1.69E-46 |
MS.gene051746 | MS.gene061145 | 0.805395 | 1.36E-49 | -1.69E-46 |
MS.gene051748 | MS.gene061145 | 0.814939 | 1.19E-51 | -1.69E-46 |
MS.gene051756 | MS.gene061145 | 0.828082 | 1.10E-54 | -1.69E-46 |
MS.gene051850 | MS.gene061145 | 0.832492 | 9.16E-56 | -1.69E-46 |
MS.gene051903 | MS.gene061145 | 0.845912 | 3.02E-59 | -1.69E-46 |
MS.gene052202 | MS.gene061145 | 0.804405 | 2.19E-49 | -1.69E-46 |
MS.gene053109 | MS.gene061145 | 0.8596 | 3.70E-63 | -1.69E-46 |
MS.gene053952 | MS.gene061145 | 0.842274 | 2.86E-58 | -1.69E-46 |
MS.gene054937 | MS.gene061145 | 0.83865 | 2.54E-57 | -1.69E-46 |
MS.gene055162 | MS.gene061145 | 0.818345 | 2.06E-52 | -1.69E-46 |
MS.gene056075 | MS.gene061145 | 0.806505 | 7.96E-50 | -1.69E-46 |
MS.gene056432 | MS.gene061145 | 0.811903 | 5.55E-51 | -1.69E-46 |
MS.gene056631 | MS.gene061145 | 0.801901 | 7.23E-49 | -1.69E-46 |
MS.gene057052 | MS.gene061145 | 0.808212 | 3.46E-50 | -1.69E-46 |
MS.gene057094 | MS.gene061145 | 0.853873 | 1.79E-61 | -1.69E-46 |
MS.gene057234 | MS.gene061145 | 0.826271 | 2.97E-54 | -1.69E-46 |
MS.gene05809 | MS.gene061145 | 0.826744 | 2.29E-54 | -1.69E-46 |
MS.gene058906 | MS.gene061145 | 0.832458 | 9.35E-56 | -1.69E-46 |
MS.gene059726 | MS.gene061145 | 0.804167 | 2.46E-49 | -1.69E-46 |
MS.gene059898 | MS.gene061145 | 0.838131 | 3.45E-57 | -1.69E-46 |
MS.gene06001 | MS.gene061145 | 0.850086 | 2.13E-60 | -1.69E-46 |
MS.gene060463 | MS.gene061145 | 0.8188 | 1.62E-52 | -1.69E-46 |
MS.gene060465 | MS.gene061145 | 0.820745 | 5.83E-53 | -1.69E-46 |
MS.gene061145 | MS.gene06172 | 0.882622 | 8.92E-71 | -1.69E-46 |
MS.gene061145 | MS.gene06175 | 0.815508 | 8.92E-52 | -1.69E-46 |
MS.gene061145 | MS.gene063817 | 0.839322 | 1.70E-57 | -1.69E-46 |
MS.gene061145 | MS.gene064071 | 0.847078 | 1.45E-59 | -1.69E-46 |
MS.gene061145 | MS.gene064072 | 0.845539 | 3.81E-59 | -1.69E-46 |
MS.gene061145 | MS.gene065599 | 0.819051 | 1.42E-52 | -1.69E-46 |
MS.gene061145 | MS.gene065602 | 0.8039 | 2.80E-49 | -1.69E-46 |
MS.gene061145 | MS.gene066034 | 0.832662 | 8.32E-56 | -1.69E-46 |
MS.gene061145 | MS.gene066035 | 0.825648 | 4.18E-54 | -1.69E-46 |
MS.gene061145 | MS.gene066455 | 0.812157 | 4.88E-51 | -1.69E-46 |
MS.gene061145 | MS.gene067938 | 0.81013 | 1.34E-50 | -1.69E-46 |
MS.gene061145 | MS.gene068164 | 0.811199 | 7.89E-51 | -1.69E-46 |
MS.gene061145 | MS.gene068166 | 0.814938 | 1.19E-51 | -1.69E-46 |
MS.gene061145 | MS.gene068255 | 0.846031 | 2.80E-59 | -1.69E-46 |
MS.gene061145 | MS.gene06837 | 0.807594 | 4.68E-50 | -1.69E-46 |
MS.gene061145 | MS.gene069310 | 0.852091 | 5.80E-61 | -1.69E-46 |
MS.gene061145 | MS.gene06989 | 0.863733 | 2.02E-64 | -1.69E-46 |
MS.gene061145 | MS.gene069962 | 0.862397 | 5.22E-64 | -1.69E-46 |
MS.gene061145 | MS.gene070222 | 0.856599 | 2.89E-62 | -1.69E-46 |
MS.gene061145 | MS.gene071983 | 0.849259 | 3.63E-60 | -1.69E-46 |
MS.gene061145 | MS.gene072057 | 0.82721 | 1.77E-54 | -1.69E-46 |
MS.gene061145 | MS.gene07217 | 0.872782 | 2.44E-67 | -1.69E-46 |
MS.gene061145 | MS.gene07222 | 0.865754 | 4.69E-65 | -1.69E-46 |
MS.gene061145 | MS.gene072386 | 0.826579 | 2.51E-54 | -1.69E-46 |
MS.gene061145 | MS.gene072424 | 0.800595 | 1.34E-48 | -1.69E-46 |
MS.gene061145 | MS.gene073078 | 0.803634 | 3.17E-49 | -1.69E-46 |
MS.gene061145 | MS.gene073332 | 0.804651 | 1.95E-49 | -1.69E-46 |
MS.gene061145 | MS.gene074000 | 0.808181 | 3.51E-50 | -1.69E-46 |
MS.gene061145 | MS.gene074584 | 0.807566 | 4.75E-50 | -1.69E-46 |
MS.gene061145 | MS.gene074594 | 0.811836 | 5.74E-51 | -1.69E-46 |
MS.gene061145 | MS.gene07552 | 0.805638 | 1.21E-49 | -1.69E-46 |
MS.gene061145 | MS.gene09032 | 0.852082 | 5.83E-61 | -1.69E-46 |
MS.gene061145 | MS.gene09056 | 0.807745 | 4.35E-50 | -1.69E-46 |
MS.gene061145 | MS.gene09212 | 0.830836 | 2.35E-55 | -1.69E-46 |
MS.gene061145 | MS.gene20239 | 0.800539 | 1.37E-48 | -1.69E-46 |
MS.gene061145 | MS.gene20280 | 0.821128 | 4.76E-53 | -1.69E-46 |
MS.gene061145 | MS.gene20740 | 0.861232 | 1.19E-63 | -1.69E-46 |
MS.gene061145 | MS.gene21089 | 0.817065 | 4.00E-52 | -1.69E-46 |
MS.gene061145 | MS.gene21636 | 0.872868 | 2.28E-67 | -1.69E-46 |
MS.gene061145 | MS.gene22968 | 0.864711 | 9.99E-65 | -1.69E-46 |
MS.gene061145 | MS.gene23058 | 0.827709 | 1.35E-54 | -1.69E-46 |
MS.gene061145 | MS.gene23059 | 0.846844 | 1.68E-59 | -1.69E-46 |
MS.gene061145 | MS.gene23437 | 0.805382 | 1.37E-49 | -1.69E-46 |
MS.gene061145 | MS.gene23983 | 0.841064 | 5.96E-58 | -1.69E-46 |
MS.gene061145 | MS.gene24597 | 0.818648 | 1.76E-52 | -1.69E-46 |
MS.gene061145 | MS.gene24706 | 0.837777 | 4.25E-57 | -1.69E-46 |
MS.gene061145 | MS.gene24867 | 0.830385 | 3.03E-55 | -1.69E-46 |
MS.gene061145 | MS.gene24930 | 0.815501 | 8.95E-52 | -1.69E-46 |
MS.gene061145 | MS.gene27678 | 0.850649 | 1.48E-60 | -1.69E-46 |
MS.gene061145 | MS.gene27879 | 0.897178 | 1.81E-76 | -1.69E-46 |
MS.gene061145 | MS.gene27991 | 0.821371 | 4.18E-53 | -1.69E-46 |
MS.gene061145 | MS.gene28159 | 0.837271 | 5.74E-57 | -1.69E-46 |
MS.gene061145 | MS.gene28323 | 0.898633 | 4.38E-77 | -1.69E-46 |
MS.gene061145 | MS.gene28632 | 0.81056 | 1.08E-50 | -1.69E-46 |
MS.gene061145 | MS.gene29581 | 0.802031 | 6.80E-49 | -1.69E-46 |
MS.gene061145 | MS.gene29736 | 0.803685 | 3.10E-49 | -1.69E-46 |
MS.gene061145 | MS.gene30904 | 0.809886 | 1.52E-50 | -1.69E-46 |
MS.gene061145 | MS.gene31405 | 0.813332 | 2.70E-51 | -1.69E-46 |
MS.gene061145 | MS.gene33384 | 0.876251 | 1.62E-68 | -1.69E-46 |
MS.gene061145 | MS.gene34001 | 0.801263 | 9.78E-49 | -1.69E-46 |
MS.gene061145 | MS.gene34283 | 0.867288 | 1.53E-65 | -1.69E-46 |
MS.gene061145 | MS.gene34284 | 0.862809 | 3.90E-64 | -1.69E-46 |
MS.gene061145 | MS.gene34285 | 0.840392 | 8.94E-58 | -1.69E-46 |
MS.gene061145 | MS.gene35046 | 0.838291 | 3.14E-57 | -1.69E-46 |
MS.gene061145 | MS.gene35214 | 0.841117 | 5.77E-58 | -1.69E-46 |
MS.gene061145 | MS.gene35379 | 0.806774 | 6.99E-50 | -1.69E-46 |
MS.gene061145 | MS.gene35699 | 0.827648 | 1.39E-54 | -1.69E-46 |
MS.gene061145 | MS.gene36392 | 0.857535 | 1.53E-62 | -1.69E-46 |
MS.gene061145 | MS.gene39317 | 0.813649 | 2.30E-51 | -1.69E-46 |
MS.gene061145 | MS.gene39764 | 0.802051 | 6.74E-49 | -1.69E-46 |
MS.gene061145 | MS.gene40055 | 0.805578 | 1.25E-49 | -1.69E-46 |
MS.gene061145 | MS.gene41901 | 0.814388 | 1.58E-51 | -1.69E-46 |
MS.gene061145 | MS.gene41902 | 0.808751 | 2.65E-50 | -1.69E-46 |
MS.gene061145 | MS.gene42247 | 0.825665 | 4.14E-54 | -1.69E-46 |
MS.gene061145 | MS.gene44141 | 0.800804 | 1.21E-48 | -1.69E-46 |
MS.gene061145 | MS.gene44260 | 0.813897 | 2.03E-51 | -1.69E-46 |
MS.gene061145 | MS.gene46392 | 0.800689 | 1.28E-48 | -1.69E-46 |
MS.gene061145 | MS.gene47955 | 0.808094 | 3.67E-50 | -1.69E-46 |
MS.gene061145 | MS.gene48256 | 0.839166 | 1.86E-57 | -1.69E-46 |
MS.gene061145 | MS.gene49777 | 0.828606 | 8.19E-55 | -1.69E-46 |
MS.gene061145 | MS.gene51142 | 0.811696 | 6.15E-51 | -1.69E-46 |
MS.gene061145 | MS.gene51658 | 0.811295 | 7.52E-51 | -1.69E-46 |
MS.gene061145 | MS.gene55732 | 0.838528 | 2.73E-57 | -1.69E-46 |
MS.gene061145 | MS.gene55887 | 0.846376 | 2.26E-59 | -1.69E-46 |
MS.gene061145 | MS.gene57210 | 0.823817 | 1.13E-53 | -1.69E-46 |
MS.gene061145 | MS.gene57391 | 0.867441 | 1.37E-65 | -1.69E-46 |
MS.gene061145 | MS.gene57462 | 0.847752 | 9.48E-60 | -1.69E-46 |
MS.gene061145 | MS.gene57578 | 0.827286 | 1.70E-54 | -1.69E-46 |
MS.gene061145 | MS.gene58148 | 0.83453 | 2.84E-56 | -1.69E-46 |
MS.gene061145 | MS.gene58693 | 0.844874 | 5.77E-59 | -1.69E-46 |
MS.gene061145 | MS.gene59979 | 0.810432 | 1.16E-50 | -1.69E-46 |
MS.gene061145 | MS.gene60717 | 0.803105 | 4.09E-49 | -1.69E-46 |
MS.gene061145 | MS.gene61542 | 0.810102 | 1.36E-50 | -1.69E-46 |
MS.gene061145 | MS.gene62834 | 0.82516 | 5.45E-54 | -1.69E-46 |
MS.gene061145 | MS.gene63726 | 0.826116 | 3.24E-54 | -1.69E-46 |
MS.gene061145 | MS.gene65076 | 0.851777 | 7.11E-61 | -1.69E-46 |
MS.gene061145 | MS.gene65412 | 0.821211 | 4.56E-53 | -1.69E-46 |
MS.gene061145 | MS.gene66089 | 0.891114 | 5.34E-74 | -1.69E-46 |
MS.gene061145 | MS.gene66475 | 0.859628 | 3.63E-63 | -1.69E-46 |
MS.gene061145 | MS.gene67681 | 0.846374 | 2.26E-59 | -1.69E-46 |
MS.gene061145 | MS.gene68171 | 0.815743 | 7.91E-52 | -1.69E-46 |
MS.gene061145 | MS.gene68735 | 0.800701 | 1.27E-48 | -1.69E-46 |
MS.gene061145 | MS.gene68810 | 0.841895 | 3.60E-58 | -1.69E-46 |
MS.gene061145 | MS.gene69649 | 0.860377 | 2.16E-63 | -1.69E-46 |
MS.gene061145 | MS.gene70105 | 0.848283 | 6.76E-60 | -1.69E-46 |
MS.gene061145 | MS.gene70215 | 0.86811 | 8.33E-66 | -1.69E-46 |
MS.gene061145 | MS.gene70292 | 0.806489 | 8.02E-50 | -1.69E-46 |
MS.gene061145 | MS.gene70305 | 0.84589 | 3.06E-59 | -1.69E-46 |
MS.gene061145 | MS.gene72285 | 0.833405 | 5.43E-56 | -1.69E-46 |
MS.gene061145 | MS.gene74458 | 0.802623 | 5.14E-49 | -1.69E-46 |
MS.gene061145 | MS.gene74854 | 0.812594 | 3.92E-51 | -1.69E-46 |
MS.gene061145 | MS.gene75171 | 0.809178 | 2.15E-50 | -1.69E-46 |
MS.gene061145 | MS.gene75477 | 0.829414 | 5.22E-55 | -1.69E-46 |
MS.gene061145 | MS.gene76478 | 0.831022 | 2.11E-55 | -1.69E-46 |
MS.gene061145 | MS.gene76576 | 0.801789 | 7.63E-49 | -1.69E-46 |
MS.gene061145 | MS.gene77282 | 0.839505 | 1.52E-57 | -1.69E-46 |
MS.gene061145 | MS.gene77441 | 0.809296 | 2.03E-50 | -1.69E-46 |
MS.gene061145 | MS.gene79605 | 0.839003 | 2.05E-57 | -1.69E-46 |
MS.gene061145 | MS.gene82827 | 0.832222 | 1.07E-55 | -1.69E-46 |
MS.gene061145 | MS.gene83217 | 0.861566 | 9.38E-64 | -1.69E-46 |
MS.gene061145 | MS.gene84316 | 0.829228 | 5.79E-55 | -1.69E-46 |
MS.gene061145 | MS.gene85108 | 0.823984 | 1.03E-53 | -1.69E-46 |
MS.gene061145 | MS.gene85186 | 0.840219 | 9.92E-58 | -1.69E-46 |
MS.gene061145 | MS.gene86214 | 0.804803 | 1.81E-49 | -1.69E-46 |
MS.gene061145 | MS.gene86392 | 0.806112 | 9.64E-50 | -1.69E-46 |
MS.gene061145 | MS.gene86937 | 0.820612 | 6.26E-53 | -1.69E-46 |
MS.gene061145 | MS.gene87190 | 0.82042 | 6.92E-53 | -1.69E-46 |
MS.gene061145 | MS.gene87309 | 0.844107 | 9.28E-59 | -1.69E-46 |
MS.gene061145 | MS.gene88371 | 0.81347 | 2.52E-51 | -1.69E-46 |
MS.gene061145 | MS.gene88427 | 0.848188 | 7.19E-60 | -1.69E-46 |
MS.gene061145 | MS.gene89027 | 0.806181 | 9.32E-50 | -1.69E-46 |
MS.gene061145 | MS.gene89677 | 0.826321 | 2.89E-54 | -1.69E-46 |
MS.gene061145 | MS.gene89721 | 0.825157 | 5.46E-54 | -1.69E-46 |
MS.gene061145 | MS.gene90833 | 0.800391 | 1.47E-48 | -1.69E-46 |
MS.gene061145 | MS.gene91524 | 0.846261 | 2.43E-59 | -1.69E-46 |
MS.gene061145 | MS.gene92572 | 0.870836 | 1.08E-66 | -1.69E-46 |
MS.gene061145 | MS.gene92818 | 0.811597 | 6.47E-51 | -1.69E-46 |
MS.gene061145 | MS.gene92819 | 0.831583 | 1.54E-55 | -1.69E-46 |
MS.gene061145 | MS.gene93973 | 0.838031 | 3.66E-57 | -1.69E-46 |
MS.gene061145 | MS.gene95055 | 0.801452 | 8.95E-49 | -1.69E-46 |
MS.gene061145 | MS.gene95233 | 0.815466 | 9.11E-52 | -1.69E-46 |
MS.gene061145 | MS.gene98113 | 0.841621 | 4.25E-58 | -1.69E-46 |
MS.gene061145 | MS.gene99709 | 0.805624 | 1.22E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061145.t1 | MTR_4g068040 | 94.030 | 67 | 4 | 0 | 1 | 67 | 1 | 67 | 2.51e-41 | 129 |
MS.gene061145.t1 | MTR_4g068040 | 100.000 | 63 | 0 | 0 | 1 | 63 | 1 | 63 | 9.29e-41 | 127 |
MS.gene061145.t1 | MTR_2g018680 | 91.045 | 67 | 6 | 0 | 1 | 67 | 1 | 67 | 2.01e-39 | 124 |
MS.gene061145.t1 | MTR_8g079485 | 89.552 | 67 | 7 | 0 | 1 | 67 | 1 | 67 | 4.58e-39 | 123 |
MS.gene061145.t1 | MTR_2g018680 | 93.750 | 64 | 4 | 0 | 1 | 64 | 1 | 64 | 1.44e-38 | 122 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061145.t1 | AT3G59540 | 89.552 | 67 | 7 | 0 | 1 | 67 | 1 | 67 | 1.15e-39 | 125 |
MS.gene061145.t1 | AT2G43460 | 89.552 | 67 | 7 | 0 | 1 | 67 | 1 | 67 | 1.15e-39 | 125 |
Find 11 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGCAAATCAATGAGATTA+AGG | 0.290766 | 1.4:+77780660 | MS.gene061145:CDS |
TTGTTATAGGTGTAAGCTTA+AGG | 0.368189 | 1.4:+77780965 | MS.gene061145:intron |
CAAAGATGTTGTCAAGTTCA+AGG | 0.413071 | 1.4:+77780738 | MS.gene061145:CDS |
ACAAAGTGTGTACAAGTACT+TGG | 0.506752 | 1.4:-77780770 | None:intergenic |
TTAATCTCATTGATTTGCTT+AGG | 0.531275 | 1.4:-77780658 | None:intergenic |
TTGAAGCAATCACTTCCTCC+AGG | 0.546677 | 1.4:+77780820 | MS.gene061145:CDS |
AGGACTTCCTCCTCACTGCT+AGG | 0.557805 | 1.4:+77780680 | MS.gene061145:CDS |
CCTCCTCACTGCTAGGAGGA+AGG | 0.586231 | 1.4:+77780687 | MS.gene061145:CDS |
CCTTCCTCCTAGCAGTGAGG+AGG | 0.655712 | 1.4:-77780687 | None:intergenic |
CGTCCTTCCTCCTAGCAGTG+AGG | 0.660436 | 1.4:-77780690 | None:intergenic |
ACTTCCTCCTCACTGCTAGG+AGG | 0.666318 | 1.4:+77780683 | MS.gene061145:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACATTAAAAATCAAAAT+AGG | - | chr1.4:77780350-77780369 | None:intergenic | 10.0% |
!! | TTTATTTATTTATTTGGATT+TGG | + | chr1.4:77780571-77780590 | MS.gene061145:intron | 10.0% |
!!! | ATTTTATTTACTCAATTTTA+TGG | + | chr1.4:77780414-77780433 | MS.gene061145:intron | 10.0% |
!! | ACATTTCAATAAACATAAAA+AGG | - | chr1.4:77780636-77780655 | None:intergenic | 15.0% |
!! | ATAAGAAATTAAGAATTACA+AGG | - | chr1.4:77780882-77780901 | None:intergenic | 15.0% |
!!! | AAATTGTTGTTGTTTGTTAT+AGG | + | chr1.4:77780952-77780971 | MS.gene061145:intron | 20.0% |
!!! | TTATTTTTCGTCATATGTTA+TGG | + | chr1.4:77780853-77780872 | MS.gene061145:intron | 20.0% |
! | AAAAATAATTCTCACTAACC+TGG | - | chr1.4:77780841-77780860 | None:intergenic | 25.0% |
! | ATTATACACTGATCTGAATT+AGG | + | chr1.4:77780474-77780493 | MS.gene061145:intron | 25.0% |
! | TAAGCAAATCAATGAGATTA+AGG | + | chr1.4:77780660-77780679 | MS.gene061145:CDS | 25.0% |
! | TTCCTAAAAAAAACTGTGAA+TGG | - | chr1.4:77780305-77780324 | None:intergenic | 25.0% |
!!! | CACAGTTTTTTTTAGGAAAT+TGG | + | chr1.4:77780307-77780326 | MS.gene061145:intron | 25.0% |
!!! | TTAATCTCATTGATTTGCTT+AGG | - | chr1.4:77780661-77780680 | None:intergenic | 25.0% |
!!! | TTCCATTCACAGTTTTTTTT+AGG | + | chr1.4:77780300-77780319 | MS.gene061145:intron | 25.0% |
ACTCCAATGTTTCAATTACA+TGG | - | chr1.4:77780449-77780468 | None:intergenic | 30.0% | |
GAACCATGTAATTGAAACAT+TGG | + | chr1.4:77780443-77780462 | MS.gene061145:intron | 30.0% | |
GATCTGAATTAGGTGATTTA+GGG | + | chr1.4:77780484-77780503 | MS.gene061145:intron | 30.0% | |
TGATCTGAATTAGGTGATTT+AGG | + | chr1.4:77780483-77780502 | MS.gene061145:intron | 30.0% | |
TTGTTATAGGTGTAAGCTTA+AGG | + | chr1.4:77780965-77780984 | MS.gene061145:intron | 30.0% | |
! | CAAACTTGGTAGTTGTTAAA+GGG | + | chr1.4:77780518-77780537 | MS.gene061145:intron | 30.0% |
! | TCAAACTTGGTAGTTGTTAA+AGG | + | chr1.4:77780517-77780536 | MS.gene061145:intron | 30.0% |
! | TGGATTTTTGTGTTGTGATT+TGG | + | chr1.4:77780591-77780610 | MS.gene061145:intron | 30.0% |
! | TTTGCTTCTCTTGATTTTCA+CGG | - | chr1.4:77780722-77780741 | None:intergenic | 30.0% |
AATAATTCTCACTAACCTGG+AGG | - | chr1.4:77780838-77780857 | None:intergenic | 35.0% | |
ACAAAGTGTGTACAAGTACT+TGG | - | chr1.4:77780773-77780792 | None:intergenic | 35.0% | |
CAAAGATGTTGTCAAGTTCA+AGG | + | chr1.4:77780738-77780757 | MS.gene061145:CDS | 35.0% | |
GAAACACTGCAAAGAATCAA+TGG | - | chr1.4:77780270-77780289 | None:intergenic | 35.0% | |
! | TTGTGTTGTGATTTGGAAGA+TGG | + | chr1.4:77780598-77780617 | MS.gene061145:intron | 35.0% |
! | GGGCTTTTGATCTTCAAACT+TGG | + | chr1.4:77780504-77780523 | MS.gene061145:intron | 40.0% |
TTGAAGCAATCACTTCCTCC+AGG | + | chr1.4:77780820-77780839 | MS.gene061145:CDS | 45.0% | |
!!! | TTCTATTTTATTTATTTATT+TGG | + | chr1.4:77780565-77780584 | MS.gene061145:intron | 5.0% |
ACTTCCTCCTCACTGCTAGG+AGG | + | chr1.4:77780683-77780702 | MS.gene061145:CDS | 55.0% | |
AGGACTTCCTCCTCACTGCT+AGG | + | chr1.4:77780680-77780699 | MS.gene061145:CDS | 55.0% | |
CCTCCTCACTGCTAGGAGGA+AGG | + | chr1.4:77780687-77780706 | MS.gene061145:CDS | 60.0% | |
CCTTCCTCCTAGCAGTGAGG+AGG | - | chr1.4:77780690-77780709 | None:intergenic | 60.0% | |
CGTCCTTCCTCCTAGCAGTG+AGG | - | chr1.4:77780693-77780712 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 77780248 | 77780993 | 77780248 | ID=MS.gene061145 |
chr1.4 | mRNA | 77780248 | 77780993 | 77780248 | ID=MS.gene061145.t1;Parent=MS.gene061145 |
chr1.4 | exon | 77780248 | 77780250 | 77780248 | ID=MS.gene061145.t1.exon1;Parent=MS.gene061145.t1 |
chr1.4 | CDS | 77780248 | 77780250 | 77780248 | ID=cds.MS.gene061145.t1;Parent=MS.gene061145.t1 |
chr1.4 | exon | 77780658 | 77780841 | 77780658 | ID=MS.gene061145.t1.exon2;Parent=MS.gene061145.t1 |
chr1.4 | CDS | 77780658 | 77780841 | 77780658 | ID=cds.MS.gene061145.t1;Parent=MS.gene061145.t1 |
chr1.4 | exon | 77780974 | 77780993 | 77780974 | ID=MS.gene061145.t1.exon3;Parent=MS.gene061145.t1 |
chr1.4 | CDS | 77780974 | 77780993 | 77780974 | ID=cds.MS.gene061145.t1;Parent=MS.gene061145.t1 |
Gene Sequence |
Protein sequence |