Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072622.t1 | XP_003626098.1 | 98 | 254 | 5 | 0 | 1 | 254 | 1 | 254 | 2.50E-145 | 524.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072622.t1 | Q9ZSI1 | 76.5 | 251 | 59 | 0 | 4 | 254 | 5 | 255 | 3.9e-115 | 415.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072622.t1 | G7KVH3 | 98.0 | 254 | 5 | 0 | 1 | 254 | 1 | 254 | 1.8e-145 | 524.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050720 | MS.gene072622 | 0.921044 | 5.93E-88 | -1.69E-46 |
| MS.gene050722 | MS.gene072622 | 0.922428 | 9.97E-89 | -1.69E-46 |
| MS.gene050723 | MS.gene072622 | 0.89798 | 8.30E-77 | -1.69E-46 |
| MS.gene050725 | MS.gene072622 | 0.935363 | 9.54E-97 | -1.69E-46 |
| MS.gene050726 | MS.gene072622 | 0.885126 | 1.06E-71 | -1.69E-46 |
| MS.gene050822 | MS.gene072622 | 0.874252 | 7.81E-68 | -1.69E-46 |
| MS.gene050823 | MS.gene072622 | 0.902068 | 1.41E-78 | -1.69E-46 |
| MS.gene053403 | MS.gene072622 | 0.806899 | 6.57E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene072622 | 0.811937 | 5.45E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072622.t1 | MTR_7g111010 | 98.031 | 254 | 5 | 0 | 1 | 254 | 1 | 254 | 0.0 | 517 |
| MS.gene072622.t1 | MTR_7g110990 | 92.520 | 254 | 4 | 1 | 1 | 254 | 1 | 239 | 2.19e-173 | 477 |
| MS.gene072622.t1 | MTR_1g085460 | 85.833 | 240 | 34 | 0 | 15 | 254 | 18 | 257 | 2.93e-158 | 439 |
| MS.gene072622.t1 | MTR_1g026020 | 62.550 | 251 | 93 | 1 | 4 | 254 | 6 | 255 | 1.31e-118 | 339 |
| MS.gene072622.t1 | MTR_5g075320 | 58.871 | 248 | 98 | 3 | 2 | 249 | 4 | 247 | 6.47e-107 | 309 |
| MS.gene072622.t1 | MTR_2g097030 | 59.363 | 251 | 96 | 4 | 1 | 248 | 6 | 253 | 1.56e-105 | 306 |
| MS.gene072622.t1 | MTR_3g094060 | 59.756 | 246 | 95 | 3 | 3 | 248 | 7 | 248 | 4.47e-105 | 305 |
| MS.gene072622.t1 | MTR_3g094040 | 59.756 | 246 | 95 | 3 | 3 | 248 | 7 | 248 | 6.34e-105 | 304 |
| MS.gene072622.t1 | MTR_7g061720 | 63.677 | 223 | 77 | 3 | 27 | 248 | 32 | 251 | 1.08e-104 | 304 |
| MS.gene072622.t1 | MTR_5g041700 | 64.912 | 228 | 75 | 4 | 27 | 254 | 25 | 247 | 2.55e-104 | 303 |
| MS.gene072622.t1 | MTR_4g081950 | 61.224 | 245 | 90 | 4 | 4 | 248 | 39 | 278 | 3.52e-104 | 304 |
| MS.gene072622.t1 | MTR_5g079950 | 60.324 | 247 | 92 | 4 | 5 | 248 | 9 | 252 | 4.42e-104 | 302 |
| MS.gene072622.t1 | MTR_3g435430 | 64.474 | 228 | 76 | 4 | 27 | 254 | 25 | 247 | 5.73e-104 | 302 |
| MS.gene072622.t1 | MTR_7g011060 | 61.224 | 245 | 82 | 5 | 5 | 248 | 3 | 235 | 4.47e-102 | 297 |
| MS.gene072622.t1 | MTR_3g466790 | 59.592 | 245 | 95 | 3 | 5 | 249 | 10 | 250 | 1.61e-101 | 296 |
| MS.gene072622.t1 | MTR_3g466760 | 59.184 | 245 | 96 | 3 | 5 | 249 | 16 | 256 | 9.03e-100 | 291 |
| MS.gene072622.t1 | MTR_4g063975 | 56.126 | 253 | 103 | 4 | 1 | 248 | 2 | 251 | 2.24e-97 | 285 |
| MS.gene072622.t1 | MTR_6g012520 | 64.414 | 222 | 67 | 4 | 27 | 248 | 28 | 237 | 9.92e-92 | 271 |
| MS.gene072622.t1 | MTR_5g011210 | 51.550 | 258 | 113 | 6 | 4 | 254 | 10 | 262 | 2.53e-87 | 260 |
| MS.gene072622.t1 | MTR_4g102450 | 51.373 | 255 | 116 | 4 | 5 | 254 | 10 | 261 | 4.65e-87 | 259 |
| MS.gene072622.t1 | MTR_7g013120 | 48.988 | 247 | 118 | 4 | 9 | 254 | 14 | 253 | 4.59e-85 | 254 |
| MS.gene072622.t1 | MTR_7g013150 | 50.199 | 251 | 116 | 5 | 5 | 254 | 11 | 253 | 9.13e-85 | 253 |
| MS.gene072622.t1 | MTR_7g013140 | 51.417 | 247 | 114 | 4 | 9 | 254 | 10 | 251 | 1.44e-84 | 253 |
| MS.gene072622.t1 | MTR_4g124340 | 50.673 | 223 | 105 | 3 | 27 | 248 | 61 | 279 | 6.08e-84 | 252 |
| MS.gene072622.t1 | MTR_8g464350 | 50.000 | 248 | 115 | 5 | 8 | 254 | 15 | 254 | 1.08e-81 | 245 |
| MS.gene072622.t1 | MTR_8g058990 | 50.218 | 229 | 108 | 4 | 27 | 254 | 30 | 253 | 1.09e-77 | 235 |
| MS.gene072622.t1 | MTR_0040s0140 | 47.773 | 247 | 121 | 4 | 4 | 249 | 13 | 252 | 4.39e-77 | 234 |
| MS.gene072622.t1 | MTR_2g090255 | 46.531 | 245 | 127 | 3 | 6 | 249 | 7 | 248 | 2.23e-74 | 227 |
| MS.gene072622.t1 | MTR_5g076950 | 48.444 | 225 | 109 | 3 | 27 | 249 | 41 | 260 | 7.73e-72 | 221 |
| MS.gene072622.t1 | MTR_3g064510 | 46.725 | 229 | 115 | 5 | 27 | 249 | 53 | 280 | 7.51e-68 | 211 |
| MS.gene072622.t1 | MTR_6g012500 | 58.333 | 96 | 39 | 1 | 153 | 248 | 181 | 275 | 9.14e-33 | 120 |
| MS.gene072622.t1 | MTR_0008s0120 | 31.579 | 247 | 108 | 7 | 8 | 254 | 14 | 199 | 1.05e-31 | 115 |
| MS.gene072622.t1 | MTR_2g090270 | 30.962 | 239 | 139 | 8 | 27 | 254 | 35 | 258 | 2.58e-30 | 114 |
| MS.gene072622.t1 | MTR_2g090265 | 30.153 | 262 | 157 | 9 | 4 | 254 | 10 | 256 | 2.03e-29 | 111 |
| MS.gene072622.t1 | MTR_0122s0020 | 31.381 | 239 | 138 | 9 | 27 | 254 | 41 | 264 | 3.57e-26 | 103 |
| MS.gene072622.t1 | MTR_0118s0070 | 32.780 | 241 | 126 | 10 | 32 | 254 | 53 | 275 | 9.38e-26 | 102 |
| MS.gene072622.t1 | MTR_1g085365 | 80.000 | 55 | 11 | 0 | 198 | 252 | 4 | 58 | 9.02e-25 | 93.6 |
| MS.gene072622.t1 | MTR_4g028640 | 31.765 | 255 | 135 | 12 | 17 | 254 | 32 | 264 | 1.88e-24 | 98.6 |
| MS.gene072622.t1 | MTR_4g099370 | 28.077 | 260 | 157 | 11 | 5 | 254 | 11 | 250 | 2.05e-22 | 92.8 |
| MS.gene072622.t1 | MTR_0809s0010 | 30.041 | 243 | 128 | 12 | 27 | 250 | 47 | 266 | 2.22e-21 | 90.5 |
| MS.gene072622.t1 | MTR_5g013440 | 27.132 | 258 | 162 | 11 | 5 | 254 | 12 | 251 | 2.76e-20 | 87.4 |
| MS.gene072622.t1 | MTR_4g075790 | 31.224 | 237 | 136 | 11 | 28 | 254 | 24 | 243 | 1.88e-18 | 82.4 |
| MS.gene072622.t1 | MTR_4g098930 | 27.925 | 265 | 165 | 11 | 1 | 253 | 1 | 251 | 1.80e-16 | 77.0 |
| MS.gene072622.t1 | MTR_0122s0020 | 31.818 | 176 | 94 | 9 | 27 | 191 | 41 | 201 | 4.67e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072622.t1 | AT4G01630 | 76.494 | 251 | 59 | 0 | 4 | 254 | 5 | 255 | 5.84e-147 | 411 |
| MS.gene072622.t1 | AT1G20190 | 67.411 | 224 | 72 | 1 | 31 | 254 | 30 | 252 | 1.40e-110 | 319 |
| MS.gene072622.t1 | AT2G40610 | 61.224 | 245 | 86 | 3 | 5 | 249 | 14 | 249 | 1.49e-107 | 311 |
| MS.gene072622.t1 | AT5G05290 | 56.967 | 244 | 99 | 3 | 6 | 249 | 14 | 251 | 2.95e-106 | 308 |
| MS.gene072622.t1 | AT1G69530 | 64.865 | 222 | 74 | 3 | 27 | 248 | 27 | 244 | 3.48e-103 | 301 |
| MS.gene072622.t1 | AT1G69530 | 64.865 | 222 | 74 | 3 | 27 | 248 | 27 | 244 | 4.40e-103 | 300 |
| MS.gene072622.t1 | AT1G69530 | 64.865 | 222 | 74 | 3 | 27 | 248 | 27 | 244 | 4.40e-103 | 300 |
| MS.gene072622.t1 | AT3G55500 | 59.677 | 248 | 94 | 5 | 4 | 248 | 9 | 253 | 1.30e-102 | 299 |
| MS.gene072622.t1 | AT5G56320 | 58.000 | 250 | 99 | 4 | 1 | 248 | 1 | 246 | 1.92e-102 | 298 |
| MS.gene072622.t1 | AT5G56320 | 58.000 | 250 | 99 | 4 | 1 | 248 | 1 | 246 | 1.92e-102 | 298 |
| MS.gene072622.t1 | AT2G03090 | 57.787 | 244 | 99 | 3 | 5 | 248 | 8 | 247 | 2.00e-102 | 298 |
| MS.gene072622.t1 | AT5G56320 | 58.000 | 250 | 99 | 4 | 1 | 248 | 1 | 246 | 1.37e-101 | 298 |
| MS.gene072622.t1 | AT2G39700 | 62.946 | 224 | 79 | 3 | 26 | 248 | 30 | 250 | 2.73e-101 | 295 |
| MS.gene072622.t1 | AT5G02260 | 56.574 | 251 | 101 | 4 | 3 | 248 | 4 | 251 | 8.25e-101 | 294 |
| MS.gene072622.t1 | AT2G28950 | 57.312 | 253 | 98 | 5 | 1 | 248 | 3 | 250 | 1.31e-100 | 294 |
| MS.gene072622.t1 | AT2G37640 | 62.500 | 224 | 80 | 3 | 27 | 249 | 36 | 256 | 2.50e-100 | 293 |
| MS.gene072622.t1 | AT3G29030 | 60.360 | 222 | 77 | 3 | 27 | 248 | 38 | 248 | 1.42e-97 | 286 |
| MS.gene072622.t1 | AT1G26770 | 58.921 | 241 | 95 | 3 | 8 | 248 | 7 | 243 | 8.80e-95 | 278 |
| MS.gene072622.t1 | AT1G26770 | 58.921 | 241 | 95 | 3 | 8 | 248 | 17 | 253 | 1.30e-94 | 278 |
| MS.gene072622.t1 | AT3G15370 | 52.823 | 248 | 108 | 3 | 4 | 250 | 7 | 246 | 5.31e-90 | 266 |
| MS.gene072622.t1 | AT1G20190 | 64.767 | 193 | 67 | 1 | 62 | 254 | 2 | 193 | 9.15e-90 | 264 |
| MS.gene072622.t1 | AT1G69530 | 63.547 | 203 | 68 | 4 | 27 | 229 | 27 | 223 | 1.08e-88 | 263 |
| MS.gene072622.t1 | AT1G69530 | 59.276 | 221 | 84 | 4 | 1 | 221 | 1 | 215 | 1.94e-88 | 261 |
| MS.gene072622.t1 | AT2G37640 | 59.420 | 207 | 80 | 3 | 44 | 249 | 28 | 231 | 8.55e-87 | 258 |
| MS.gene072622.t1 | AT1G12560 | 54.585 | 229 | 99 | 4 | 27 | 254 | 37 | 261 | 1.33e-85 | 256 |
| MS.gene072622.t1 | AT3G15370 | 47.122 | 278 | 108 | 4 | 4 | 250 | 7 | 276 | 2.49e-83 | 251 |
| MS.gene072622.t1 | AT1G62980 | 49.200 | 250 | 120 | 6 | 8 | 254 | 11 | 256 | 4.98e-81 | 244 |
| MS.gene072622.t1 | AT5G39270 | 51.754 | 228 | 104 | 4 | 27 | 254 | 58 | 279 | 5.57e-80 | 242 |
| MS.gene072622.t1 | AT5G39300 | 50.439 | 228 | 107 | 4 | 27 | 254 | 55 | 276 | 2.03e-78 | 238 |
| MS.gene072622.t1 | AT5G39290 | 51.316 | 228 | 105 | 4 | 27 | 254 | 58 | 279 | 2.13e-78 | 238 |
| MS.gene072622.t1 | AT5G39310 | 49.787 | 235 | 111 | 5 | 21 | 254 | 84 | 312 | 3.46e-78 | 239 |
| MS.gene072622.t1 | AT5G39280 | 50.000 | 228 | 108 | 4 | 27 | 254 | 54 | 275 | 6.03e-78 | 237 |
| MS.gene072622.t1 | AT4G38210 | 44.444 | 252 | 131 | 5 | 1 | 249 | 5 | 250 | 4.39e-70 | 216 |
| MS.gene072622.t1 | AT3G03220 | 45.333 | 225 | 116 | 3 | 27 | 249 | 40 | 259 | 8.59e-69 | 213 |
| MS.gene072622.t1 | AT5G39260 | 45.852 | 229 | 112 | 5 | 27 | 254 | 45 | 262 | 1.99e-61 | 194 |
| MS.gene072622.t1 | AT4G28250 | 30.189 | 265 | 154 | 9 | 6 | 254 | 11 | 260 | 5.30e-32 | 118 |
| MS.gene072622.t1 | AT2G20750 | 31.970 | 269 | 151 | 9 | 6 | 254 | 11 | 267 | 1.90e-31 | 117 |
| MS.gene072622.t1 | AT1G65680 | 34.711 | 242 | 129 | 11 | 27 | 254 | 47 | 273 | 1.13e-29 | 112 |
| MS.gene072622.t1 | AT4G28250 | 29.167 | 264 | 152 | 9 | 6 | 254 | 11 | 254 | 8.27e-29 | 110 |
| MS.gene072622.t1 | AT2G45110 | 34.568 | 243 | 122 | 11 | 30 | 254 | 36 | 259 | 1.78e-24 | 98.6 |
| MS.gene072622.t1 | AT1G65681 | 31.878 | 229 | 123 | 11 | 41 | 254 | 12 | 222 | 3.09e-21 | 89.4 |
| MS.gene072622.t1 | AT2G20750 | 31.707 | 205 | 109 | 8 | 6 | 191 | 11 | 203 | 1.08e-19 | 85.1 |
| MS.gene072622.t1 | AT4G28250 | 28.293 | 205 | 113 | 8 | 6 | 196 | 11 | 195 | 6.75e-18 | 80.1 |
| MS.gene072622.t1 | AT4G17030 | 25.483 | 259 | 174 | 8 | 1 | 252 | 1 | 247 | 1.77e-17 | 79.7 |
| MS.gene072622.t1 | AT4G28250 | 28.500 | 200 | 109 | 8 | 6 | 191 | 11 | 190 | 3.43e-17 | 77.8 |
| MS.gene072622.t1 | AT3G60570 | 29.098 | 244 | 137 | 10 | 27 | 254 | 34 | 257 | 8.17e-16 | 75.1 |
| MS.gene072622.t1 | AT4G38400 | 27.354 | 223 | 123 | 9 | 50 | 254 | 47 | 248 | 4.08e-15 | 73.2 |
| MS.gene072622.t1 | AT3G45970 | 28.696 | 230 | 122 | 11 | 45 | 254 | 14 | 221 | 1.57e-14 | 71.2 |
| MS.gene072622.t1 | AT3G45960 | 27.778 | 216 | 131 | 10 | 50 | 254 | 46 | 247 | 6.67e-13 | 67.0 |
| MS.gene072622.t1 | AT3G45970 | 28.000 | 225 | 120 | 11 | 50 | 254 | 46 | 248 | 6.59e-12 | 64.3 |
| MS.gene072622.t1 | AT3G60570 | 28.319 | 226 | 126 | 10 | 45 | 254 | 4 | 209 | 1.28e-11 | 62.8 |
Find 0 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTAATTAAAGTAACAC+CGG | + | 50572:20894-20913 | MS.gene072622:intron | 15.0% |
| !! | AACATAAGATTTACCATAAA+TGG | + | 50572:21122-21141 | MS.gene072622:CDS | 20.0% |
| !! | ACATAAGATTTACCATAAAT+GGG | + | 50572:21123-21142 | MS.gene072622:CDS | 20.0% |
| !! | TCTTCTATTGTTAATGAATA+TGG | + | 50572:20233-20252 | MS.gene072622:CDS | 20.0% |
| !! | TTAGAATTCAACTCAAAAAT+GGG | + | 50572:21309-21328 | MS.gene072622:CDS | 20.0% |
| !!! | ATTTCTAAAGTTTGGATAAA+AGG | + | 50572:21197-21216 | MS.gene072622:CDS | 20.0% |
| !!! | CTTAATTTTGATTAACTTGT+AGG | + | 50572:20429-20448 | MS.gene072622:intron | 20.0% |
| !!! | TTTAGAATTCAACTCAAAAA+TGG | + | 50572:21308-21327 | MS.gene072622:CDS | 20.0% |
| !!! | TTTCTAAAGTTTGGATAAAA+GGG | + | 50572:21198-21217 | MS.gene072622:CDS | 20.0% |
| ! | AAGGGTCAAAAAAGAATAAA+TGG | + | 50572:21216-21235 | MS.gene072622:CDS | 25.0% |
| ! | AGGGTCAAAAAAGAATAAAT+GGG | + | 50572:21217-21236 | MS.gene072622:CDS | 25.0% |
| ! | GTATTTATATATGCAGAGTT+GGG | + | 50572:21084-21103 | MS.gene072622:intron | 25.0% |
| ! | TGTATTTATATATGCAGAGT+TGG | + | 50572:21083-21102 | MS.gene072622:intron | 25.0% |
| !!! | AATTTTGATTAACTTGTAGG+TGG | + | 50572:20432-20451 | MS.gene072622:intron | 25.0% |
| AAAATAGTCTCTCCCATTTA+TGG | - | 50572:21138-21157 | None:intergenic | 30.0% | |
| AATCTATACACAGATGGATA+TGG | + | 50572:20471-20490 | MS.gene072622:CDS | 30.0% | |
| ACTAAAAATACTTGTTCGCT+AGG | - | 50572:21003-21022 | None:intergenic | 30.0% | |
| AGTTTGACAATGAAACATCA+AGG | - | 50572:20954-20973 | None:intergenic | 30.0% | |
| ATTAATTAAAGTAACACCGG+TGG | + | 50572:20897-20916 | MS.gene072622:intron | 30.0% | |
| GTTTGACAATGAAACATCAA+GGG | - | 50572:20953-20972 | None:intergenic | 30.0% | |
| TATGGAAATCTATACACAGA+TGG | + | 50572:20465-20484 | MS.gene072622:CDS | 30.0% | |
| !!! | TAGCGAACAAGTATTTTTAG+TGG | + | 50572:21002-21021 | MS.gene072622:intron | 30.0% |
| ACATACCTCCTGTACAAAAT+GGG | - | 50572:20759-20778 | None:intergenic | 35.0% | |
| ACATATCAAAGTGAGGTCTA+GGG | - | 50572:20689-20708 | None:intergenic | 35.0% | |
| AGTACTGCTCTCTTTAATGA+TGG | + | 50572:20513-20532 | MS.gene072622:CDS | 35.0% | |
| ATTTGTGGCAGTAATAGTGA+TGG | - | 50572:20613-20632 | None:intergenic | 35.0% | |
| CAAAGCCTAAGCTATCTTAA+TGG | + | 50572:21272-21291 | MS.gene072622:CDS | 35.0% | |
| GTACTGCTCTCTTTAATGAT+GGG | + | 50572:20514-20533 | MS.gene072622:CDS | 35.0% | |
| GTACTTAGCTATAGTCTGAA+AGG | - | 50572:20721-20740 | None:intergenic | 35.0% | |
| TCTGACCATTAAGATAGCTT+AGG | - | 50572:21280-21299 | None:intergenic | 35.0% | |
| TTAATGTTGCACCTTCCAAT+TGG | + | 50572:21348-21367 | MS.gene072622:CDS | 35.0% | |
| ! | GAATTGTTCCCATTTTGTAC+AGG | + | 50572:20748-20767 | MS.gene072622:CDS | 35.0% |
| ! | GTTTGGTGGACAAAAATTTG+TGG | - | 50572:20628-20647 | None:intergenic | 35.0% |
| ! | TTGGTGCTTATAAGCAATGT+AGG | + | 50572:21161-21180 | MS.gene072622:CDS | 35.0% |
| ! | TTTAATGATGGGAAGTCATG+TGG | + | 50572:20525-20544 | MS.gene072622:CDS | 35.0% |
| !! | GTGGAGAGATTTCTAAAGTT+TGG | + | 50572:21189-21208 | MS.gene072622:CDS | 35.0% |
| !!! | GAACGTTACTTTTGTAAGAC+TGG | - | 50572:21382-21401 | None:intergenic | 35.0% |
| ACCAACCACCATTGTCATTA+GGG | - | 50572:20659-20678 | None:intergenic | 40.0% | |
| ACTATAGCTAAGTACAGAGC+TGG | + | 50572:20726-20745 | MS.gene072622:CDS | 40.0% | |
| ATATCAAAGTGAGGTCTAGG+GGG | - | 50572:20687-20706 | None:intergenic | 40.0% | |
| CAAATTACCCATTGTTCCTG+AGG | - | 50572:20331-20350 | None:intergenic | 40.0% | |
| CAAGCTCATGCAACTTTCTA+TGG | + | 50572:20294-20313 | MS.gene072622:CDS | 40.0% | |
| CATATCAAAGTGAGGTCTAG+GGG | - | 50572:20688-20707 | None:intergenic | 40.0% | |
| CTTATAAGCAATGTAGGTGG+AGG | + | 50572:21167-21186 | MS.gene072622:CDS | 40.0% | |
| GAACCGATGTCAATGAATTG+GGG | + | 50572:21239-21258 | MS.gene072622:CDS | 40.0% | |
| GACAATGAAACATCAAGGGA+CGG | - | 50572:20949-20968 | None:intergenic | 40.0% | |
| GACATACCTCCTGTACAAAA+TGG | - | 50572:20760-20779 | None:intergenic | 40.0% | |
| GACATATCAAAGTGAGGTCT+AGG | - | 50572:20690-20709 | None:intergenic | 40.0% | |
| GATTTGATTGATATGCAGCG+TGG | - | 50572:21033-21052 | None:intergenic | 40.0% | |
| GGAACCGATGTCAATGAATT+GGG | + | 50572:21238-21257 | MS.gene072622:CDS | 40.0% | |
| GGTTGAGACATATCAAAGTG+AGG | - | 50572:20696-20715 | None:intergenic | 40.0% | |
| GTGCTTATAAGCAATGTAGG+TGG | + | 50572:21164-21183 | MS.gene072622:CDS | 40.0% | |
| GTGTCAAACTATCAGTTCAG+TGG | - | 50572:20981-21000 | None:intergenic | 40.0% | |
| TCAGAGTAGAATCTGCTGTT+TGG | + | 50572:20268-20287 | MS.gene072622:CDS | 40.0% | |
| TTAGCTATAGTCTGAAAGGC+AGG | - | 50572:20717-20736 | None:intergenic | 40.0% | |
| TTTGCACTCCCTAATGACAA+TGG | + | 50572:20648-20667 | MS.gene072622:CDS | 40.0% | |
| ! | ATCAGATAGTTTGTGACGCA+AGG | + | 50572:20556-20575 | MS.gene072622:CDS | 40.0% |
| ! | CAATGAATTGGGGTGCTAAT+TGG | + | 50572:21249-21268 | MS.gene072622:CDS | 40.0% |
| ! | TCATTAGGGAGTGCAAAGTT+TGG | - | 50572:20645-20664 | None:intergenic | 40.0% |
| ! | TTGTTCCCATTTTGTACAGG+AGG | + | 50572:20751-20770 | MS.gene072622:CDS | 40.0% |
| !! | TGGGAGAGACTATTTTGAGT+TGG | + | 50572:21142-21161 | MS.gene072622:CDS | 40.0% |
| AACTTGTAGGTGGTGCATGT+GGG | + | 50572:20442-20461 | MS.gene072622:intron | 45.0% | |
| AAGTGATGCCTCAGGAACAA+TGG | + | 50572:20320-20339 | MS.gene072622:CDS | 45.0% | |
| AGAGTTGGGTGCAAAAGAAG+TGG | + | 50572:21098-21117 | MS.gene072622:intron | 45.0% | |
| AGTGATGCCTCAGGAACAAT+GGG | + | 50572:20321-20340 | MS.gene072622:CDS | 45.0% | |
| ATAAGCAATGTAGGTGGAGG+TGG | + | 50572:21170-21189 | MS.gene072622:CDS | 45.0% | |
| CACCAACCACCATTGTCATT+AGG | - | 50572:20660-20679 | None:intergenic | 45.0% | |
| CCACGTTGTAAAATGACCAC+CGG | - | 50572:20916-20935 | None:intergenic | 45.0% | |
| GCACCCCAATTCATTGACAT+CGG | - | 50572:21245-21264 | None:intergenic | 45.0% | |
| GCACCTTCCAATTGGAGATT+TGG | + | 50572:21356-21375 | MS.gene072622:CDS | 45.0% | |
| GCTCATGCAACTTTCTATGG+TGG | + | 50572:20297-20316 | MS.gene072622:CDS | 45.0% | |
| GGGAACCGATGTCAATGAAT+TGG | + | 50572:21237-21256 | MS.gene072622:CDS | 45.0% | |
| TCCCTAATGACAATGGTGGT+TGG | + | 50572:20655-20674 | MS.gene072622:CDS | 45.0% | |
| TGGCCAAATCTCCAATTGGA+AGG | - | 50572:21362-21381 | None:intergenic | 45.0% | |
| ! | AATGATGGGAAGTCATGTGG+TGG | + | 50572:20528-20547 | MS.gene072622:CDS | 45.0% |
| ! | AGACTGGCCAAATCTCCAAT+TGG | - | 50572:21366-21385 | None:intergenic | 45.0% |
| ! | TAACTTGTAGGTGGTGCATG+TGG | + | 50572:20441-20460 | MS.gene072622:intron | 45.0% |
| ! | TTAGGGAGTGCAAAGTTTGG+TGG | - | 50572:20642-20661 | None:intergenic | 45.0% |
| !! | CGGTGGTCATTTTACAACGT+GGG | + | 50572:20914-20933 | MS.gene072622:intron | 45.0% |
| ACGCAAGGCAAGTTCCTCAA+TGG | + | 50572:20571-20590 | MS.gene072622:CDS | 50.0% | |
| GCACTCCCTAATGACAATGG+TGG | + | 50572:20651-20670 | MS.gene072622:CDS | 50.0% | |
| GTTCCTCAATGGTGTCTCAG+AGG | + | 50572:20582-20601 | MS.gene072622:CDS | 50.0% | |
| ! | TATGGTGGAAGTGATGCCTC+AGG | + | 50572:20312-20331 | MS.gene072622:CDS | 50.0% |
| !! | CCGGTGGTCATTTTACAACG+TGG | + | 50572:20913-20932 | MS.gene072622:intron | 50.0% |
| GTAGGTGGTGCATGTGGGTA+TGG | + | 50572:20447-20466 | MS.gene072622:intron | 55.0% | |
| !! | GTGCCTCTGAGACACCATTG+AGG | - | 50572:20588-20607 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50572 | gene | 20210 | 21409 | 20210 | ID=MS.gene072622 |
| 50572 | mRNA | 20210 | 21409 | 20210 | ID=MS.gene072622.t1;Parent=MS.gene072622 |
| 50572 | exon | 20210 | 20342 | 20210 | ID=MS.gene072622.t1.exon1;Parent=MS.gene072622.t1 |
| 50572 | CDS | 20210 | 20342 | 20210 | ID=cds.MS.gene072622.t1;Parent=MS.gene072622.t1 |
| 50572 | exon | 20451 | 20772 | 20451 | ID=MS.gene072622.t1.exon2;Parent=MS.gene072622.t1 |
| 50572 | CDS | 20451 | 20772 | 20451 | ID=cds.MS.gene072622.t1;Parent=MS.gene072622.t1 |
| 50572 | exon | 21100 | 21409 | 21100 | ID=MS.gene072622.t1.exon3;Parent=MS.gene072622.t1 |
| 50572 | CDS | 21100 | 21409 | 21100 | ID=cds.MS.gene072622.t1;Parent=MS.gene072622.t1 |
| Gene Sequence |
| Protein sequence |
