Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050720.t1 | XP_003626098.1 | 100 | 225 | 0 | 0 | 2 | 226 | 30 | 254 | 3.70E-132 | 480.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050720.t1 | Q9ZSI1 | 82.3 | 226 | 40 | 0 | 1 | 226 | 30 | 255 | 1.9e-113 | 409.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050720.t1 | G7KVH3 | 100.0 | 225 | 0 | 0 | 2 | 226 | 30 | 254 | 2.7e-132 | 480.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04926 | MS.gene050720 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene050720 | 0.804742 | 1.87E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene050722 | 0.96923 | 8.10E-130 | -1.69E-46 |
| MS.gene050720 | MS.gene050723 | 0.856819 | 2.48E-62 | -1.69E-46 |
| MS.gene050720 | MS.gene050725 | 0.947955 | 2.45E-106 | -1.69E-46 |
| MS.gene050720 | MS.gene050726 | 0.833867 | 4.17E-56 | -1.69E-46 |
| MS.gene050720 | MS.gene050822 | 0.84829 | 6.74E-60 | -1.69E-46 |
| MS.gene050720 | MS.gene050823 | 0.85454 | 1.15E-61 | -1.69E-46 |
| MS.gene050720 | MS.gene052211 | 0.8084 | 3.16E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene053406 | 0.807651 | 4.55E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene054742 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene056680 | 0.829192 | 5.91E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene058603 | 0.82683 | 2.19E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene059892 | 0.804482 | 2.12E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene060087 | 0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene063912 | 0.834433 | 3.01E-56 | -1.69E-46 |
| MS.gene050720 | MS.gene065110 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene06593 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene066417 | 0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene066500 | 0.814657 | 1.38E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene066602 | 0.852368 | 4.83E-61 | -1.69E-46 |
| MS.gene050720 | MS.gene066937 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene06756 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene06805 | 0.804443 | 2.16E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene07005 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene070947 | 0.829188 | 5.92E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene07097 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene072293 | 0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene072622 | 0.921044 | 5.93E-88 | -1.69E-46 |
| MS.gene050720 | MS.gene072623 | 0.974362 | 5.05E-138 | -1.69E-46 |
| MS.gene050720 | MS.gene072625 | 0.917352 | 5.90E-86 | -1.69E-46 |
| MS.gene050720 | MS.gene072626 | 0.972451 | 8.68E-135 | -1.69E-46 |
| MS.gene050720 | MS.gene072628 | 0.922308 | 1.16E-88 | -1.69E-46 |
| MS.gene050720 | MS.gene072629 | 0.97294 | 1.36E-135 | -1.69E-46 |
| MS.gene050720 | MS.gene072664 | 0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene08733 | 0.804259 | 2.35E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene08883 | 0.838114 | 3.49E-57 | -1.69E-46 |
| MS.gene050720 | MS.gene22951 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene24420 | 0.811271 | 7.61E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene24862 | 0.818216 | 2.20E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene25652 | 0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene26294 | 0.817156 | 3.82E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene28548 | 0.809132 | 2.20E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene28619 | 0.872991 | 2.08E-67 | -1.69E-46 |
| MS.gene050720 | MS.gene28620 | 0.887651 | 1.18E-72 | -1.69E-46 |
| MS.gene050720 | MS.gene30918 | 0.808058 | 3.73E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene33445 | 0.809868 | 1.53E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene34373 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene35598 | 0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene35741 | 0.800492 | 1.41E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene36326 | 0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene36337 | -0.80757 | 4.74E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene37192 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene38435 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene40173 | 0.825996 | 3.46E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene40846 | 0.817092 | 3.95E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene42080 | 0.80956 | 1.78E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene43874 | 0.808003 | 3.83E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene44712 | 0.82925 | 5.72E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene44958 | 0.828287 | 9.78E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene45038 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene45607 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene45893 | 0.808661 | 2.78E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene46198 | 0.802875 | 4.56E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene46433 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene47437 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene48805 | 0.820396 | 7.01E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene48806 | 0.800144 | 1.65E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene48807 | 0.821988 | 3.01E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene48885 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene50279 | 0.823347 | 1.45E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene52797 | 0.810356 | 1.20E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene54029 | 0.830839 | 2.34E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene54574 | 0.801824 | 7.51E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene55078 | 0.809208 | 2.12E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene58786 | 0.829948 | 3.87E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene59765 | 0.812095 | 5.04E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene59920 | 0.83266 | 8.33E-56 | -1.69E-46 |
| MS.gene050720 | MS.gene60177 | -0.800809 | 1.21E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene60913 | 0.822054 | 2.91E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene63914 | 0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene65040 | 0.809905 | 1.50E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene65497 | 0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene65500 | 0.820237 | 7.63E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene65822 | 0.806249 | 9.02E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene65948 | 0.839056 | 1.99E-57 | -1.69E-46 |
| MS.gene050720 | MS.gene65951 | 0.815181 | 1.05E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene67145 | 0.811772 | 5.92E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene69355 | 0.808285 | 3.34E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene69635 | 0.81029 | 1.24E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene69966 | 0.822872 | 1.88E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene70143 | -0.817487 | 3.21E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene71350 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene73164 | 0.80223 | 6.19E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene73511 | 0.802938 | 4.42E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene73512 | 0.810961 | 8.89E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene73995 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene74565 | 0.824431 | 8.10E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene74786 | 0.816422 | 5.58E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene75472 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene76521 | -0.806591 | 7.64E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene76737 | 0.832104 | 1.14E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene77033 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene77325 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene78663 | 0.829792 | 4.22E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene79222 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene79624 | 0.808339 | 3.25E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene80293 | 0.821371 | 4.18E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene80744 | 0.81187 | 5.64E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene81349 | 0.814613 | 1.41E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene82244 | 0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene82245 | 0.834502 | 2.89E-56 | -1.69E-46 |
| MS.gene050720 | MS.gene84143 | 0.804194 | 2.43E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene84222 | 0.820251 | 7.57E-53 | -1.69E-46 |
| MS.gene050720 | MS.gene85750 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene87056 | 0.811229 | 7.77E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene88365 | 0.837461 | 5.13E-57 | -1.69E-46 |
| MS.gene050720 | MS.gene90407 | 0.815377 | 9.54E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene90814 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene91223 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene91226 | 0.831938 | 1.26E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene91537 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene92334 | 0.814227 | 1.72E-51 | -1.69E-46 |
| MS.gene050720 | MS.gene95804 | 0.82733 | 1.66E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene96299 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene050720 | MS.gene96749 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene97182 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene97335 | 0.807122 | 5.90E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene98475 | 0.804819 | 1.80E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene98480 | 0.807102 | 5.95E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene99062 | 0.81626 | 6.06E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050720.t1 | MTR_7g111010 | 100.000 | 225 | 0 | 0 | 2 | 226 | 30 | 254 | 4.07e-170 | 468 |
| MS.gene050720.t1 | MTR_7g110990 | 100.000 | 225 | 0 | 0 | 2 | 226 | 15 | 239 | 1.92e-169 | 466 |
| MS.gene050720.t1 | MTR_1g085460 | 87.168 | 226 | 29 | 0 | 1 | 226 | 32 | 257 | 1.81e-150 | 419 |
| MS.gene050720.t1 | MTR_1g026020 | 68.000 | 225 | 71 | 1 | 2 | 226 | 32 | 255 | 9.06e-117 | 333 |
| MS.gene050720.t1 | MTR_7g061720 | 63.801 | 221 | 76 | 3 | 1 | 220 | 34 | 251 | 2.20e-103 | 300 |
| MS.gene050720.t1 | MTR_5g075320 | 64.384 | 219 | 74 | 3 | 3 | 221 | 33 | 247 | 3.94e-103 | 298 |
| MS.gene050720.t1 | MTR_3g094040 | 65.297 | 219 | 72 | 3 | 2 | 220 | 34 | 248 | 8.04e-103 | 298 |
| MS.gene050720.t1 | MTR_3g435430 | 64.889 | 225 | 74 | 4 | 2 | 226 | 28 | 247 | 8.26e-103 | 298 |
| MS.gene050720.t1 | MTR_5g041700 | 66.210 | 219 | 70 | 3 | 2 | 220 | 28 | 242 | 8.54e-103 | 298 |
| MS.gene050720.t1 | MTR_3g094060 | 65.297 | 219 | 72 | 3 | 2 | 220 | 34 | 248 | 9.58e-103 | 298 |
| MS.gene050720.t1 | MTR_2g097030 | 64.545 | 220 | 74 | 3 | 2 | 220 | 37 | 253 | 3.25e-102 | 296 |
| MS.gene050720.t1 | MTR_4g081950 | 65.753 | 219 | 71 | 3 | 2 | 220 | 64 | 278 | 6.73e-102 | 296 |
| MS.gene050720.t1 | MTR_5g079950 | 64.545 | 220 | 74 | 3 | 2 | 220 | 36 | 252 | 3.30e-101 | 294 |
| MS.gene050720.t1 | MTR_7g011060 | 65.297 | 219 | 64 | 4 | 2 | 220 | 29 | 235 | 7.44e-99 | 287 |
| MS.gene050720.t1 | MTR_3g466790 | 64.545 | 220 | 74 | 3 | 2 | 221 | 35 | 250 | 2.09e-97 | 284 |
| MS.gene050720.t1 | MTR_3g466760 | 64.384 | 219 | 74 | 3 | 3 | 221 | 42 | 256 | 3.56e-96 | 281 |
| MS.gene050720.t1 | MTR_4g063975 | 61.991 | 221 | 80 | 3 | 1 | 220 | 34 | 251 | 6.05e-94 | 276 |
| MS.gene050720.t1 | MTR_6g012520 | 64.545 | 220 | 66 | 4 | 2 | 221 | 31 | 238 | 1.71e-90 | 266 |
| MS.gene050720.t1 | MTR_5g011210 | 55.507 | 227 | 95 | 4 | 2 | 226 | 40 | 262 | 1.62e-85 | 254 |
| MS.gene050720.t1 | MTR_4g102450 | 55.752 | 226 | 96 | 3 | 2 | 226 | 39 | 261 | 1.33e-84 | 252 |
| MS.gene050720.t1 | MTR_7g013120 | 51.982 | 227 | 104 | 3 | 1 | 226 | 31 | 253 | 1.38e-83 | 249 |
| MS.gene050720.t1 | MTR_7g013140 | 54.626 | 227 | 97 | 4 | 1 | 226 | 30 | 251 | 2.44e-82 | 246 |
| MS.gene050720.t1 | MTR_4g124340 | 50.679 | 221 | 104 | 3 | 1 | 220 | 63 | 279 | 3.99e-82 | 246 |
| MS.gene050720.t1 | MTR_7g013150 | 53.304 | 227 | 100 | 4 | 1 | 226 | 32 | 253 | 6.16e-82 | 245 |
| MS.gene050720.t1 | MTR_8g464350 | 51.982 | 227 | 103 | 4 | 1 | 226 | 33 | 254 | 5.70e-80 | 240 |
| MS.gene050720.t1 | MTR_8g058990 | 50.220 | 227 | 107 | 4 | 1 | 226 | 32 | 253 | 8.22e-77 | 232 |
| MS.gene050720.t1 | MTR_0040s0140 | 50.450 | 222 | 106 | 3 | 1 | 221 | 34 | 252 | 3.01e-74 | 226 |
| MS.gene050720.t1 | MTR_2g090255 | 49.321 | 221 | 108 | 3 | 2 | 221 | 31 | 248 | 9.12e-72 | 219 |
| MS.gene050720.t1 | MTR_5g076950 | 48.649 | 222 | 107 | 3 | 2 | 221 | 44 | 260 | 1.71e-70 | 216 |
| MS.gene050720.t1 | MTR_3g064510 | 46.903 | 226 | 113 | 5 | 2 | 221 | 56 | 280 | 6.00e-67 | 208 |
| MS.gene050720.t1 | MTR_6g012500 | 58.333 | 96 | 39 | 1 | 125 | 220 | 181 | 275 | 3.34e-32 | 118 |
| MS.gene050720.t1 | MTR_0008s0120 | 45.217 | 115 | 62 | 1 | 112 | 226 | 86 | 199 | 6.39e-31 | 113 |
| MS.gene050720.t1 | MTR_0008s0120 | 62.264 | 53 | 20 | 0 | 2 | 54 | 35 | 87 | 9.11e-16 | 73.2 |
| MS.gene050720.t1 | MTR_2g090270 | 31.197 | 234 | 135 | 8 | 4 | 226 | 40 | 258 | 1.20e-29 | 111 |
| MS.gene050720.t1 | MTR_2g090265 | 32.051 | 234 | 133 | 9 | 4 | 226 | 38 | 256 | 6.90e-28 | 106 |
| MS.gene050720.t1 | MTR_1g085365 | 81.818 | 55 | 10 | 0 | 170 | 224 | 4 | 58 | 3.27e-26 | 96.7 |
| MS.gene050720.t1 | MTR_0118s0070 | 33.195 | 241 | 125 | 11 | 4 | 226 | 53 | 275 | 9.50e-26 | 101 |
| MS.gene050720.t1 | MTR_0122s0020 | 31.624 | 234 | 134 | 9 | 4 | 226 | 46 | 264 | 1.99e-25 | 100 |
| MS.gene050720.t1 | MTR_4g028640 | 32.231 | 242 | 125 | 12 | 2 | 226 | 45 | 264 | 4.09e-22 | 91.7 |
| MS.gene050720.t1 | MTR_0809s0010 | 31.250 | 240 | 123 | 13 | 2 | 222 | 50 | 266 | 7.48e-21 | 88.6 |
| MS.gene050720.t1 | MTR_4g099370 | 28.814 | 236 | 143 | 10 | 1 | 226 | 30 | 250 | 1.74e-19 | 84.3 |
| MS.gene050720.t1 | MTR_5g013440 | 27.039 | 233 | 149 | 9 | 2 | 226 | 32 | 251 | 2.86e-19 | 84.0 |
| MS.gene050720.t1 | MTR_4g075790 | 31.356 | 236 | 135 | 11 | 1 | 226 | 25 | 243 | 1.30e-18 | 82.0 |
| MS.gene050720.t1 | MTR_4g098930 | 29.362 | 235 | 142 | 10 | 1 | 225 | 31 | 251 | 1.24e-15 | 73.9 |
| MS.gene050720.t1 | MTR_0122s0020 | 32.749 | 171 | 89 | 10 | 4 | 163 | 46 | 201 | 2.61e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050720.t1 | AT4G01630 | 82.301 | 226 | 40 | 0 | 1 | 226 | 30 | 255 | 6.57e-144 | 402 |
| MS.gene050720.t1 | AT1G20190 | 67.857 | 224 | 71 | 1 | 3 | 226 | 30 | 252 | 3.10e-112 | 322 |
| MS.gene050720.t1 | AT2G40610 | 65.297 | 219 | 73 | 2 | 3 | 221 | 34 | 249 | 6.13e-105 | 303 |
| MS.gene050720.t1 | AT5G05290 | 61.538 | 221 | 82 | 2 | 1 | 221 | 34 | 251 | 3.95e-104 | 301 |
| MS.gene050720.t1 | AT1G69530 | 65.297 | 219 | 72 | 3 | 2 | 220 | 30 | 244 | 1.43e-101 | 296 |
| MS.gene050720.t1 | AT1G69530 | 65.297 | 219 | 72 | 3 | 2 | 220 | 30 | 244 | 1.47e-101 | 295 |
| MS.gene050720.t1 | AT1G69530 | 65.297 | 219 | 72 | 3 | 2 | 220 | 30 | 244 | 1.47e-101 | 295 |
| MS.gene050720.t1 | AT2G03090 | 63.014 | 219 | 77 | 3 | 2 | 220 | 33 | 247 | 1.32e-100 | 292 |
| MS.gene050720.t1 | AT3G55500 | 63.182 | 220 | 77 | 3 | 2 | 220 | 37 | 253 | 7.89e-100 | 291 |
| MS.gene050720.t1 | AT5G02260 | 62.727 | 220 | 78 | 3 | 2 | 220 | 35 | 251 | 1.85e-99 | 290 |
| MS.gene050720.t1 | AT2G39700 | 63.182 | 220 | 77 | 3 | 2 | 220 | 34 | 250 | 4.10e-99 | 289 |
| MS.gene050720.t1 | AT2G28950 | 63.182 | 220 | 77 | 3 | 2 | 220 | 34 | 250 | 1.28e-98 | 287 |
| MS.gene050720.t1 | AT2G37640 | 62.443 | 221 | 79 | 3 | 2 | 221 | 39 | 256 | 4.09e-98 | 286 |
| MS.gene050720.t1 | AT5G56320 | 61.644 | 219 | 80 | 3 | 2 | 220 | 32 | 246 | 8.10e-98 | 285 |
| MS.gene050720.t1 | AT5G56320 | 61.644 | 219 | 80 | 3 | 2 | 220 | 32 | 246 | 8.10e-98 | 285 |
| MS.gene050720.t1 | AT5G56320 | 61.644 | 219 | 80 | 3 | 2 | 220 | 32 | 246 | 3.88e-97 | 285 |
| MS.gene050720.t1 | AT3G29030 | 60.731 | 219 | 75 | 3 | 2 | 220 | 41 | 248 | 2.30e-96 | 281 |
| MS.gene050720.t1 | AT1G26770 | 64.384 | 219 | 74 | 3 | 2 | 220 | 29 | 243 | 9.27e-93 | 272 |
| MS.gene050720.t1 | AT1G26770 | 64.384 | 219 | 74 | 3 | 2 | 220 | 39 | 253 | 1.43e-92 | 272 |
| MS.gene050720.t1 | AT1G20190 | 65.285 | 193 | 66 | 1 | 34 | 226 | 2 | 193 | 2.30e-91 | 267 |
| MS.gene050720.t1 | AT3G15370 | 56.054 | 223 | 92 | 2 | 1 | 222 | 29 | 246 | 2.18e-88 | 261 |
| MS.gene050720.t1 | AT1G69530 | 64.000 | 200 | 66 | 4 | 2 | 201 | 30 | 223 | 1.32e-87 | 259 |
| MS.gene050720.t1 | AT1G69530 | 66.146 | 192 | 59 | 4 | 2 | 193 | 30 | 215 | 2.27e-87 | 258 |
| MS.gene050720.t1 | AT2G37640 | 59.709 | 206 | 79 | 3 | 16 | 220 | 28 | 230 | 5.09e-87 | 257 |
| MS.gene050720.t1 | AT1G12560 | 54.867 | 226 | 97 | 4 | 2 | 226 | 40 | 261 | 4.02e-84 | 251 |
| MS.gene050720.t1 | AT3G15370 | 49.407 | 253 | 92 | 3 | 1 | 222 | 29 | 276 | 8.98e-82 | 246 |
| MS.gene050720.t1 | AT5G39270 | 51.770 | 226 | 103 | 4 | 1 | 226 | 60 | 279 | 1.20e-79 | 240 |
| MS.gene050720.t1 | AT5G39300 | 50.442 | 226 | 106 | 4 | 1 | 226 | 57 | 276 | 3.73e-78 | 236 |
| MS.gene050720.t1 | AT5G39310 | 51.339 | 224 | 102 | 5 | 4 | 226 | 95 | 312 | 4.33e-78 | 237 |
| MS.gene050720.t1 | AT5G39290 | 51.327 | 226 | 104 | 4 | 1 | 226 | 60 | 279 | 4.93e-78 | 236 |
| MS.gene050720.t1 | AT5G39280 | 50.000 | 226 | 107 | 4 | 1 | 226 | 56 | 275 | 1.26e-77 | 235 |
| MS.gene050720.t1 | AT1G62980 | 51.982 | 227 | 103 | 5 | 2 | 226 | 34 | 256 | 2.20e-77 | 233 |
| MS.gene050720.t1 | AT3G03220 | 45.495 | 222 | 114 | 3 | 2 | 221 | 43 | 259 | 1.75e-67 | 209 |
| MS.gene050720.t1 | AT4G38210 | 48.879 | 223 | 108 | 4 | 2 | 221 | 31 | 250 | 1.90e-67 | 208 |
| MS.gene050720.t1 | AT5G39260 | 45.815 | 227 | 111 | 5 | 1 | 226 | 47 | 262 | 3.59e-61 | 192 |
| MS.gene050720.t1 | AT2G20750 | 33.755 | 237 | 133 | 8 | 2 | 226 | 43 | 267 | 1.35e-29 | 111 |
| MS.gene050720.t1 | AT4G28250 | 31.224 | 237 | 136 | 8 | 2 | 226 | 39 | 260 | 5.51e-29 | 109 |
| MS.gene050720.t1 | AT1G65680 | 35.000 | 240 | 125 | 12 | 2 | 226 | 50 | 273 | 1.19e-28 | 109 |
| MS.gene050720.t1 | AT4G28250 | 30.085 | 236 | 134 | 8 | 2 | 226 | 39 | 254 | 7.54e-26 | 101 |
| MS.gene050720.t1 | AT2G45110 | 34.156 | 243 | 123 | 11 | 2 | 226 | 36 | 259 | 9.51e-25 | 98.6 |
| MS.gene050720.t1 | AT1G65681 | 31.004 | 229 | 125 | 11 | 13 | 226 | 12 | 222 | 2.42e-21 | 88.6 |
| MS.gene050720.t1 | AT2G20750 | 34.104 | 173 | 91 | 7 | 2 | 163 | 43 | 203 | 6.79e-18 | 79.3 |
| MS.gene050720.t1 | AT4G17030 | 26.087 | 230 | 151 | 8 | 2 | 224 | 30 | 247 | 3.14e-15 | 72.8 |
| MS.gene050720.t1 | AT4G38400 | 27.354 | 223 | 123 | 9 | 22 | 226 | 47 | 248 | 3.36e-15 | 72.8 |
| MS.gene050720.t1 | AT4G28250 | 29.379 | 177 | 95 | 7 | 2 | 168 | 39 | 195 | 3.63e-15 | 72.0 |
| MS.gene050720.t1 | AT3G45970 | 28.696 | 230 | 122 | 11 | 17 | 226 | 14 | 221 | 1.25e-14 | 70.9 |
| MS.gene050720.t1 | AT3G60570 | 28.992 | 238 | 133 | 10 | 5 | 226 | 40 | 257 | 1.73e-14 | 70.9 |
| MS.gene050720.t1 | AT4G28250 | 29.651 | 172 | 91 | 7 | 2 | 163 | 39 | 190 | 2.54e-14 | 69.7 |
| MS.gene050720.t1 | AT3G45960 | 27.778 | 216 | 131 | 10 | 22 | 226 | 46 | 247 | 8.02e-13 | 66.2 |
| MS.gene050720.t1 | AT3G45970 | 28.000 | 225 | 120 | 11 | 22 | 226 | 46 | 248 | 5.36e-12 | 63.9 |
| MS.gene050720.t1 | AT3G60570 | 28.319 | 226 | 126 | 10 | 17 | 226 | 4 | 209 | 1.41e-11 | 62.0 |
Find 0 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTAATTAAAGTAACAC+CGG | - | 50570:16846-16865 | MS.gene050720:intron | 15.0% |
| !! | AACATAAGATTTACCATAAA+TGG | - | 50570:17074-17093 | MS.gene050720:CDS | 20.0% |
| !! | ACATAAGATTTACCATAAAT+GGG | - | 50570:17075-17094 | MS.gene050720:CDS | 20.0% |
| !! | TTAGAATTCAACTCAAAAAT+GGG | - | 50570:17261-17280 | MS.gene050720:intron | 20.0% |
| !!! | ATTTCTAAAGTTTGGATAAA+AGG | - | 50570:17149-17168 | MS.gene050720:CDS | 20.0% |
| !!! | CTTTATTTTGATTAACTTGT+AGG | - | 50570:16381-16400 | MS.gene050720:CDS | 20.0% |
| !!! | TTTAGAATTCAACTCAAAAA+TGG | - | 50570:17260-17279 | MS.gene050720:intron | 20.0% |
| !!! | TTTCTAAAGTTTGGATAAAA+GGG | - | 50570:17150-17169 | MS.gene050720:CDS | 20.0% |
| ! | AAGGGTCAAAAAAGAATAAA+TGG | - | 50570:17168-17187 | MS.gene050720:CDS | 25.0% |
| ! | AGGGTCAAAAAAGAATAAAT+GGG | - | 50570:17169-17188 | MS.gene050720:CDS | 25.0% |
| ! | GTATTTATATATGCAGAGTT+GGG | - | 50570:17036-17055 | MS.gene050720:CDS | 25.0% |
| ! | TGTATTTATATATGCAGAGT+TGG | - | 50570:17035-17054 | MS.gene050720:CDS | 25.0% |
| !!! | TATTTTGATTAACTTGTAGG+TGG | - | 50570:16384-16403 | MS.gene050720:CDS | 25.0% |
| AAAATAGTCTCTCCCATTTA+TGG | + | 50570:17090-17109 | None:intergenic | 30.0% | |
| ACTAAAAATACTTGTTCGCT+AGG | + | 50570:16955-16974 | None:intergenic | 30.0% | |
| AGTTTGACAATGAAACATCA+AGG | + | 50570:16906-16925 | None:intergenic | 30.0% | |
| ATTAATTAAAGTAACACCGG+TGG | - | 50570:16849-16868 | MS.gene050720:intron | 30.0% | |
| GTTTGACAATGAAACATCAA+GGG | + | 50570:16905-16924 | None:intergenic | 30.0% | |
| !!! | TAGCGAACAAGTATTTTTAG+TGG | - | 50570:16954-16973 | MS.gene050720:CDS | 30.0% |
| AATCTGTACACAGATGGATA+TGG | - | 50570:16423-16442 | MS.gene050720:CDS | 35.0% | |
| ACATACCTCCTGTACAAAAT+GGG | + | 50570:16711-16730 | None:intergenic | 35.0% | |
| ACATATCAAAGTGAGGTCTA+GGG | + | 50570:16641-16660 | None:intergenic | 35.0% | |
| AGTACTGCTCTCTTTAATGA+TGG | - | 50570:16465-16484 | MS.gene050720:CDS | 35.0% | |
| ATTTGTGGCAGTAATAGTGA+TGG | + | 50570:16565-16584 | None:intergenic | 35.0% | |
| CAAAGCCTAAGCTATCTTAA+TGG | - | 50570:17224-17243 | MS.gene050720:intron | 35.0% | |
| GTACTGCTCTCTTTAATGAT+GGG | - | 50570:16466-16485 | MS.gene050720:CDS | 35.0% | |
| GTACTTAGCTATAGTCTGAA+AGG | + | 50570:16673-16692 | None:intergenic | 35.0% | |
| TATGGAAATCTGTACACAGA+TGG | - | 50570:16417-16436 | MS.gene050720:CDS | 35.0% | |
| TCTGACCATTAAGATAGCTT+AGG | + | 50570:17232-17251 | None:intergenic | 35.0% | |
| TTAATGTTGCACCTTCCAAT+TGG | - | 50570:17300-17319 | MS.gene050720:intron | 35.0% | |
| ! | ATCAGATAGTTTGTGATGCA+AGG | - | 50570:16508-16527 | MS.gene050720:CDS | 35.0% |
| ! | GAATTGTTCCCATTTTGTAC+AGG | - | 50570:16700-16719 | MS.gene050720:intron | 35.0% |
| ! | GTTTGGTGGACAAAAATTTG+TGG | + | 50570:16580-16599 | None:intergenic | 35.0% |
| ! | TTGGTGCTTATAAGCAATGT+AGG | - | 50570:17113-17132 | MS.gene050720:CDS | 35.0% |
| ! | TTTAATGATGGGAAGTCATG+TGG | - | 50570:16477-16496 | MS.gene050720:CDS | 35.0% |
| !! | GTGGAGAGATTTCTAAAGTT+TGG | - | 50570:17141-17160 | MS.gene050720:CDS | 35.0% |
| ACCAACCACCATTGTCATTA+GGG | + | 50570:16611-16630 | None:intergenic | 40.0% | |
| ACTATAGCTAAGTACAGAGC+TGG | - | 50570:16678-16697 | MS.gene050720:intron | 40.0% | |
| ATATCAAAGTGAGGTCTAGG+GGG | + | 50570:16639-16658 | None:intergenic | 40.0% | |
| CAAGCTCATGCAACTTTCTA+TGG | - | 50570:16244-16263 | MS.gene050720:CDS | 40.0% | |
| CAATTTACCCATTGTTCCTG+AGG | + | 50570:16281-16300 | None:intergenic | 40.0% | |
| CATATCAAAGTGAGGTCTAG+GGG | + | 50570:16640-16659 | None:intergenic | 40.0% | |
| CTTATAAGCAATGTAGGTGG+AGG | - | 50570:17119-17138 | MS.gene050720:CDS | 40.0% | |
| GAACCGATGTCAATGAATTG+GGG | - | 50570:17191-17210 | MS.gene050720:intron | 40.0% | |
| GACAATGAAACATCAAGGGA+CGG | + | 50570:16901-16920 | None:intergenic | 40.0% | |
| GACATACCTCCTGTACAAAA+TGG | + | 50570:16712-16731 | None:intergenic | 40.0% | |
| GACATATCAAAGTGAGGTCT+AGG | + | 50570:16642-16661 | None:intergenic | 40.0% | |
| GATTTGATTGATATGCAGCG+TGG | + | 50570:16985-17004 | None:intergenic | 40.0% | |
| GGAACCGATGTCAATGAATT+GGG | - | 50570:17190-17209 | MS.gene050720:intron | 40.0% | |
| GGTTGAGACATATCAAAGTG+AGG | + | 50570:16648-16667 | None:intergenic | 40.0% | |
| GTGCTTATAAGCAATGTAGG+TGG | - | 50570:17116-17135 | MS.gene050720:CDS | 40.0% | |
| GTGTCAAACTATCAGTTCAG+TGG | + | 50570:16933-16952 | None:intergenic | 40.0% | |
| TTAGCTATAGTCTGAAAGGC+AGG | + | 50570:16669-16688 | None:intergenic | 40.0% | |
| TTTGCACTCCCTAATGACAA+TGG | - | 50570:16600-16619 | MS.gene050720:intron | 40.0% | |
| ! | CAATGAATTGGGGTGCTAAT+TGG | - | 50570:17201-17220 | MS.gene050720:intron | 40.0% |
| ! | TCATTAGGGAGTGCAAAGTT+TGG | + | 50570:16597-16616 | None:intergenic | 40.0% |
| ! | TTGTTCCCATTTTGTACAGG+AGG | - | 50570:16703-16722 | MS.gene050720:intron | 40.0% |
| !! | TGGGAGAGACTATTTTGAGT+TGG | - | 50570:17094-17113 | MS.gene050720:CDS | 40.0% |
| !!! | GGACGTTACTTTTGTAAGAC+TGG | + | 50570:17334-17353 | None:intergenic | 40.0% |
| AACTTGTAGGTGGTGCATGT+GGG | - | 50570:16394-16413 | MS.gene050720:CDS | 45.0% | |
| AAGTGATGCCTCAGGAACAA+TGG | - | 50570:16270-16289 | MS.gene050720:CDS | 45.0% | |
| AGAGTTGGGTGCAAAAGAAG+TGG | - | 50570:17050-17069 | MS.gene050720:CDS | 45.0% | |
| AGTGATGCCTCAGGAACAAT+GGG | - | 50570:16271-16290 | MS.gene050720:CDS | 45.0% | |
| ATAAGCAATGTAGGTGGAGG+TGG | - | 50570:17122-17141 | MS.gene050720:CDS | 45.0% | |
| ATGCAAGGCAAGTTCCTCAA+TGG | - | 50570:16523-16542 | MS.gene050720:CDS | 45.0% | |
| CACCAACCACCATTGTCATT+AGG | + | 50570:16612-16631 | None:intergenic | 45.0% | |
| CCACGTTGTAAAATGACCAC+CGG | + | 50570:16868-16887 | None:intergenic | 45.0% | |
| GCACCCCAATTCATTGACAT+CGG | + | 50570:17197-17216 | None:intergenic | 45.0% | |
| GCACCTTCCAATTGGAGATT+TGG | - | 50570:17308-17327 | MS.gene050720:intron | 45.0% | |
| GCTCATGCAACTTTCTATGG+TGG | - | 50570:16247-16266 | MS.gene050720:CDS | 45.0% | |
| GGGAACCGATGTCAATGAAT+TGG | - | 50570:17189-17208 | MS.gene050720:intron | 45.0% | |
| TCCCTAATGACAATGGTGGT+TGG | - | 50570:16607-16626 | MS.gene050720:intron | 45.0% | |
| TGGCCAAATCTCCAATTGGA+AGG | + | 50570:17314-17333 | None:intergenic | 45.0% | |
| ! | AATGATGGGAAGTCATGTGG+TGG | - | 50570:16480-16499 | MS.gene050720:CDS | 45.0% |
| ! | AGACTGGCCAAATCTCCAAT+TGG | + | 50570:17318-17337 | None:intergenic | 45.0% |
| ! | TAACTTGTAGGTGGTGCATG+TGG | - | 50570:16393-16412 | MS.gene050720:CDS | 45.0% |
| ! | TTAGGGAGTGCAAAGTTTGG+TGG | + | 50570:16594-16613 | None:intergenic | 45.0% |
| !! | CGGTGGTCATTTTACAACGT+GGG | - | 50570:16866-16885 | MS.gene050720:intron | 45.0% |
| GCACTCCCTAATGACAATGG+TGG | - | 50570:16603-16622 | MS.gene050720:intron | 50.0% | |
| GTTCCTCAATGGTGTCTCAG+AGG | - | 50570:16534-16553 | MS.gene050720:CDS | 50.0% | |
| ! | TATGGTGGAAGTGATGCCTC+AGG | - | 50570:16262-16281 | MS.gene050720:CDS | 50.0% |
| !! | CCGGTGGTCATTTTACAACG+TGG | - | 50570:16865-16884 | MS.gene050720:intron | 50.0% |
| GTAGGTGGTGCATGTGGGTA+TGG | - | 50570:16399-16418 | MS.gene050720:CDS | 55.0% | |
| !! | GTGCCTCTGAGACACCATTG+AGG | + | 50570:16540-16559 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50570 | gene | 16244 | 17361 | 16244 | ID=MS.gene050720 |
| 50570 | mRNA | 16244 | 17361 | 16244 | ID=MS.gene050720.t1;Parent=MS.gene050720 |
| 50570 | exon | 17313 | 17361 | 17313 | ID=MS.gene050720.t1.exon1;Parent=MS.gene050720.t1 |
| 50570 | CDS | 17313 | 17361 | 17313 | ID=cds.MS.gene050720.t1;Parent=MS.gene050720.t1 |
| 50570 | exon | 16881 | 17202 | 16881 | ID=MS.gene050720.t1.exon2;Parent=MS.gene050720.t1 |
| 50570 | CDS | 16881 | 17202 | 16881 | ID=cds.MS.gene050720.t1;Parent=MS.gene050720.t1 |
| 50570 | exon | 16244 | 16553 | 16244 | ID=MS.gene050720.t1.exon3;Parent=MS.gene050720.t1 |
| 50570 | CDS | 16244 | 16553 | 16244 | ID=cds.MS.gene050720.t1;Parent=MS.gene050720.t1 |
| Gene Sequence |
| Protein sequence |
