Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072716.t1 | XP_013450398.1 | 94.2 | 327 | 19 | 0 | 1 | 327 | 1 | 327 | 9.60E-166 | 592.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072716.t1 | Q8GX84 | 65.0 | 320 | 109 | 2 | 8 | 327 | 20 | 336 | 1.5e-114 | 414.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072716.t1 | A0A072U502 | 94.2 | 327 | 19 | 0 | 1 | 327 | 1 | 327 | 7.0e-166 | 592.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene072716.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene072716 | 0.831402 | 1.70E-55 | -1.69E-46 |
| MS.gene050885 | MS.gene072716 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene072716 | 0.801939 | 7.11E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene072716 | 0.846834 | 1.69E-59 | -1.69E-46 |
| MS.gene05188 | MS.gene072716 | 0.824438 | 8.07E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene072716 | 0.808327 | 3.27E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene072716 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene072716 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene053963 | MS.gene072716 | 0.829085 | 6.27E-55 | -1.69E-46 |
| MS.gene054328 | MS.gene072716 | 0.851222 | 1.02E-60 | -1.69E-46 |
| MS.gene054957 | MS.gene072716 | 0.820883 | 5.42E-53 | -1.69E-46 |
| MS.gene056403 | MS.gene072716 | 0.844574 | 6.95E-59 | -1.69E-46 |
| MS.gene056605 | MS.gene072716 | 0.845414 | 4.12E-59 | -1.69E-46 |
| MS.gene05689 | MS.gene072716 | 0.808944 | 2.42E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene072716 | 0.827402 | 1.60E-54 | -1.69E-46 |
| MS.gene05781 | MS.gene072716 | 0.813178 | 2.92E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene072716 | 0.81244 | 4.24E-51 | -1.69E-46 |
| MS.gene058498 | MS.gene072716 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene072716 | 0.828365 | 9.36E-55 | -1.69E-46 |
| MS.gene059935 | MS.gene072716 | 0.846995 | 1.53E-59 | -1.69E-46 |
| MS.gene060586 | MS.gene072716 | 0.81389 | 2.04E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene072716 | 0.807901 | 4.03E-50 | -1.69E-46 |
| MS.gene060830 | MS.gene072716 | 0.846108 | 2.67E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072716.t1 | MTR_7g109250 | 96.942 | 327 | 10 | 0 | 1 | 327 | 1 | 327 | 0.0 | 661 |
| MS.gene072716.t1 | MTR_7g109250 | 96.942 | 327 | 10 | 0 | 1 | 327 | 61 | 387 | 0.0 | 658 |
| MS.gene072716.t1 | MTR_7g108868 | 51.412 | 177 | 26 | 5 | 62 | 238 | 11 | 127 | 1.36e-46 | 156 |
| MS.gene072716.t1 | MTR_8g058593 | 51.412 | 177 | 26 | 5 | 62 | 238 | 11 | 127 | 1.36e-46 | 156 |
| MS.gene072716.t1 | MTR_8g058607 | 50.000 | 176 | 28 | 4 | 62 | 237 | 24 | 139 | 1.16e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072716.t1 | AT1G01350 | 69.375 | 320 | 95 | 2 | 8 | 327 | 20 | 336 | 3.31e-163 | 459 |
| MS.gene072716.t1 | AT5G06420 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.17e-161 | 455 |
| MS.gene072716.t1 | AT5G06420 | 68.125 | 320 | 96 | 2 | 8 | 327 | 58 | 371 | 3.17e-161 | 455 |
| MS.gene072716.t1 | AT4G01023 | 64.407 | 59 | 21 | 0 | 258 | 316 | 76 | 134 | 2.53e-26 | 104 |
| MS.gene072716.t1 | AT4G01023 | 65.079 | 63 | 21 | 1 | 254 | 316 | 92 | 153 | 5.86e-26 | 104 |
| MS.gene072716.t1 | AT4G01023 | 64.407 | 59 | 21 | 0 | 258 | 316 | 95 | 153 | 8.26e-26 | 103 |
Find 66 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATATTCTTCCTATTAAC+AGG | 0.250339 | 7.3:+5613040 | None:intergenic |
| TCTTCAGAAAACCTGTTAAT+AGG | 0.277151 | 7.3:-5613051 | MS.gene072716:CDS |
| TTGTAATCCTTGCATATATC+TGG | 0.290645 | 7.3:+5612533 | None:intergenic |
| GTGGGTCACACGGTCCTCTC+AGG | 0.313412 | 7.3:-5612598 | MS.gene072716:CDS |
| GATCGAGGTGATTACAAATC+TGG | 0.331028 | 7.3:-5612464 | MS.gene072716:CDS |
| TGCAAGGATTACAAGGAAAC+TGG | 0.409524 | 7.3:-5612524 | MS.gene072716:CDS |
| AAATGAAAGCTGGGTTTCTC+AGG | 0.415855 | 7.3:+5612863 | None:intergenic |
| CATTTGTCGAAACCCATTTG+TGG | 0.418726 | 7.3:-5612303 | MS.gene072716:CDS |
| CTTGCTTAAGAGCTCTTTCA+CGG | 0.431115 | 7.3:+5612747 | None:intergenic |
| CTGTGAGCATTGTGCATTGA+AGG | 0.436410 | 7.3:-5612249 | MS.gene072716:intron |
| TAGCAAAGCAACAGCAACTT+TGG | 0.436558 | 7.3:-5612807 | MS.gene072716:CDS |
| GTTGAGACAGGATCCACAAA+TGG | 0.441292 | 7.3:+5612290 | None:intergenic |
| AGAAGACTCGAAATGAAAGC+TGG | 0.441893 | 7.3:+5612853 | None:intergenic |
| ACACGGTCCTCTCAGGGCTT+CGG | 0.450938 | 7.3:-5612591 | MS.gene072716:CDS |
| TGCTTACACTTGGTTGAGAC+AGG | 0.460245 | 7.3:+5612278 | None:intergenic |
| GTCTGCAATCAGCCTACGCT+TGG | 0.462383 | 7.3:-5612081 | MS.gene072716:CDS |
| CAATAATTATACAGATCATA+AGG | 0.469416 | 7.3:-5612663 | MS.gene072716:CDS |
| GGTGGCAGATGGAGAAAGAA+TGG | 0.469953 | 7.3:-5612442 | MS.gene072716:CDS |
| TGCAGGTGAGGATGCGGAAG+AGG | 0.471533 | 7.3:-5612384 | MS.gene072716:CDS |
| CGAGGATGTAAAATTATACA+AGG | 0.486690 | 7.3:-5612690 | MS.gene072716:CDS |
| ACATACCTTGTTCAGTCGGC+TGG | 0.489348 | 7.3:+5613189 | None:intergenic |
| GCAAACAATTGCCAGTGAAA+AGG | 0.499122 | 7.3:-5612624 | MS.gene072716:CDS |
| CGACAAATGAAACACGCAAA+TGG | 0.499537 | 7.3:+5612317 | None:intergenic |
| GAAAGCAAGGAAGATGAGAT+TGG | 0.507679 | 7.3:-5612408 | MS.gene072716:CDS |
| TGCAGAGCTCTTCGAAGAGC+CGG | 0.511210 | 7.3:+5612907 | None:intergenic |
| AATTATACAGATCATAAGGC+TGG | 0.520545 | 7.3:-5612659 | MS.gene072716:CDS |
| ATCGAGGTGATTACAAATCT+GGG | 0.520829 | 7.3:-5612463 | MS.gene072716:CDS |
| GAGCTCTTTCACGGATGGCA+CGG | 0.524231 | 7.3:+5612756 | None:intergenic |
| TTGAGACAGGATCCACAAAT+GGG | 0.525917 | 7.3:+5612291 | None:intergenic |
| AGATATATGCAAGGATTACA+AGG | 0.530308 | 7.3:-5612531 | MS.gene072716:CDS |
| TGGGTCACACGGTCCTCTCA+GGG | 0.532282 | 7.3:-5612597 | MS.gene072716:CDS |
| CTTAAGAGCTCTTTCACGGA+TGG | 0.538525 | 7.3:+5612751 | None:intergenic |
| AGTCTCAAGGGAAAGAGTAC+TGG | 0.538575 | 7.3:-5612716 | MS.gene072716:CDS |
| GAAAACCAGCCGACTGAACA+AGG | 0.548242 | 7.3:-5613194 | MS.gene072716:intron |
| GTGGCAGATGGAGAAAGAAT+GGG | 0.553122 | 7.3:-5612441 | MS.gene072716:CDS |
| TTACAAATCTGGGTGGCAGA+TGG | 0.553483 | 7.3:-5612453 | MS.gene072716:CDS |
| GAAGACTCGAAATGAAAGCT+GGG | 0.554193 | 7.3:+5612854 | None:intergenic |
| AGCTCTTTCACGGATGGCAC+GGG | 0.560125 | 7.3:+5612757 | None:intergenic |
| GAAACTGGTTACTGTGGGTA+TGG | 0.560524 | 7.3:-5612509 | MS.gene072716:CDS |
| TATTGAGAATGAAGATAATG+AGG | 0.560776 | 7.3:-5613008 | MS.gene072716:CDS |
| TCATGAGATACGAAAGAAGA+TGG | 0.563924 | 7.3:-5612043 | MS.gene072716:CDS |
| ATAGGAAGAATATGAGGAAG+CGG | 0.564756 | 7.3:-5613033 | MS.gene072716:CDS |
| GGTGAGGATGCGGAAGAGGA+AGG | 0.573050 | 7.3:-5612380 | MS.gene072716:CDS |
| CTGTTAATAGGAAGAATATG+AGG | 0.583376 | 7.3:-5613039 | MS.gene072716:CDS |
| GGGATGAAGCTGAGAAAGCA+AGG | 0.584805 | 7.3:-5612421 | MS.gene072716:CDS |
| TACAAGGAAACTGGTTACTG+TGG | 0.587264 | 7.3:-5612515 | MS.gene072716:CDS |
| ACAATTGCCAGTGAAAAGGC+TGG | 0.588175 | 7.3:-5612620 | MS.gene072716:CDS |
| TTATACATACCTTGTTCAGT+CGG | 0.588673 | 7.3:+5613185 | None:intergenic |
| GATGAGATTGGCTGCAGGTG+AGG | 0.590274 | 7.3:-5612396 | MS.gene072716:CDS |
| GAAAAGGCTGGTGGGTCACA+CGG | 0.600903 | 7.3:-5612608 | MS.gene072716:CDS |
| AGGAAGATGAGATTGGCTGC+AGG | 0.603143 | 7.3:-5612401 | MS.gene072716:CDS |
| ATTGGCTGCAGGTGAGGATG+CGG | 0.603342 | 7.3:-5612390 | MS.gene072716:CDS |
| ATTGCCAGTGAAAAGGCTGG+TGG | 0.607353 | 7.3:-5612617 | MS.gene072716:CDS |
| GATACGAAAGAAGATGGCTG+AGG | 0.623889 | 7.3:-5612037 | MS.gene072716:CDS |
| TTGCCAGTGAAAAGGCTGGT+GGG | 0.630138 | 7.3:-5612616 | MS.gene072716:CDS |
| CAAGCGACTGAGAGTCTCAA+GGG | 0.630489 | 7.3:-5612728 | MS.gene072716:CDS |
| ACAGAAGTAGTGCTTACACT+TGG | 0.630927 | 7.3:+5612268 | None:intergenic |
| GCAAGCGACTGAGAGTCTCA+AGG | 0.636269 | 7.3:-5612729 | MS.gene072716:CDS |
| GGGAAAGAGTACTGGTTCCG+AGG | 0.640397 | 7.3:-5612708 | MS.gene072716:CDS |
| ACAAGGAAACTGGTTACTGT+GGG | 0.647981 | 7.3:-5612514 | MS.gene072716:CDS |
| TGTAAGTTTATGCATGATCG+AGG | 0.650874 | 7.3:-5612479 | MS.gene072716:CDS |
| TTATCAGCCAGATATATGCA+AGG | 0.656472 | 7.3:-5612540 | MS.gene072716:CDS |
| AGAGCTCTTCGAAGAGCCGG+TGG | 0.686462 | 7.3:+5612910 | None:intergenic |
| GAGGATGTAAAATTATACAA+GGG | 0.688297 | 7.3:-5612689 | MS.gene072716:CDS |
| ATGTGAGCCGAAGCCCTGAG+AGG | 0.689295 | 7.3:+5612584 | None:intergenic |
| GAGGTGATTACAAATCTGGG+TGG | 0.758440 | 7.3:-5612460 | MS.gene072716:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAGGTTAATGA+TGG | + | chr7.3:5612150-5612169 | None:intergenic | 20.0% |
| !! | CAATAATTATACAGATCATA+AGG | - | chr7.3:5612587-5612606 | MS.gene072716:CDS | 20.0% |
| ! | AGAAGTTAGGCATAATTAAA+AGG | + | chr7.3:5613105-5613124 | None:intergenic | 25.0% |
| ! | GAGGATGTAAAATTATACAA+GGG | - | chr7.3:5612561-5612580 | MS.gene072716:CDS | 25.0% |
| ! | TATTGAGAATGAAGATAATG+AGG | - | chr7.3:5612242-5612261 | MS.gene072716:intron | 25.0% |
| !! | CTTGTATAATTTTACATCCT+CGG | + | chr7.3:5612562-5612581 | None:intergenic | 25.0% |
| !!! | ACTTATTTGCTTTGAAGTTA+AGG | + | chr7.3:5613032-5613051 | None:intergenic | 25.0% |
| !!! | CTTATTTGCTTTGAAGTTAA+GGG | + | chr7.3:5613031-5613050 | None:intergenic | 25.0% |
| AAGTAAAATGAGCAGAAGTT+AGG | + | chr7.3:5613118-5613137 | None:intergenic | 30.0% | |
| AATTATACAGATCATAAGGC+TGG | - | chr7.3:5612591-5612610 | MS.gene072716:CDS | 30.0% | |
| ACAAACGCGTAGAAAAAAAA+AGG | + | chr7.3:5612160-5612179 | None:intergenic | 30.0% | |
| AGATATATGCAAGGATTACA+AGG | - | chr7.3:5612719-5612738 | MS.gene072716:CDS | 30.0% | |
| CGAGGATGTAAAATTATACA+AGG | - | chr7.3:5612560-5612579 | MS.gene072716:CDS | 30.0% | |
| CTCATATTCTTCCTATTAAC+AGG | + | chr7.3:5612213-5612232 | None:intergenic | 30.0% | |
| CTGTTAATAGGAAGAATATG+AGG | - | chr7.3:5612211-5612230 | MS.gene072716:intron | 30.0% | |
| GATGGTACAAAAAAATGTAG+AGG | + | chr7.3:5612132-5612151 | None:intergenic | 30.0% | |
| TCTTCAGAAAACCTGTTAAT+AGG | - | chr7.3:5612199-5612218 | MS.gene072716:intron | 30.0% | |
| TGTTCAGAAAAAGAACATGA+AGG | - | chr7.3:5612296-5612315 | MS.gene072716:CDS | 30.0% | |
| TTATACATACCTTGTTCAGT+CGG | + | chr7.3:5612068-5612087 | None:intergenic | 30.0% | |
| TTGTAATCCTTGCATATATC+TGG | + | chr7.3:5612720-5612739 | None:intergenic | 30.0% | |
| ! | AATAAGTTGTTCTTTTCCAC+CGG | - | chr7.3:5612324-5612343 | MS.gene072716:CDS | 30.0% |
| ACATTAAAAATGCCAAGCGT+AGG | + | chr7.3:5613184-5613203 | None:intergenic | 35.0% | |
| ATAGGAAGAATATGAGGAAG+CGG | - | chr7.3:5612217-5612236 | MS.gene072716:intron | 35.0% | |
| ATCGAGGTGATTACAAATCT+GGG | - | chr7.3:5612787-5612806 | MS.gene072716:CDS | 35.0% | |
| TCATGAGATACGAAAGAAGA+TGG | - | chr7.3:5613207-5613226 | MS.gene072716:CDS | 35.0% | |
| TGTAAGTTTATGCATGATCG+AGG | - | chr7.3:5612771-5612790 | MS.gene072716:CDS | 35.0% | |
| TTATCAGCCAGATATATGCA+AGG | - | chr7.3:5612710-5612729 | MS.gene072716:CDS | 35.0% | |
| ! | TACGCTTGGCATTTTTAATG+TGG | - | chr7.3:5613183-5613202 | MS.gene072716:intron | 35.0% |
| AAATGAAAGCTGGGTTTCTC+AGG | + | chr7.3:5612390-5612409 | None:intergenic | 40.0% | |
| ACAAGGAAACTGGTTACTGT+GGG | - | chr7.3:5612736-5612755 | MS.gene072716:CDS | 40.0% | |
| ACAGAAGTAGTGCTTACACT+TGG | + | chr7.3:5612985-5613004 | None:intergenic | 40.0% | |
| AGAAGACTCGAAATGAAAGC+TGG | + | chr7.3:5612400-5612419 | None:intergenic | 40.0% | |
| CATTTGTCGAAACCCATTTG+TGG | - | chr7.3:5612947-5612966 | MS.gene072716:CDS | 40.0% | |
| CGACAAATGAAACACGCAAA+TGG | + | chr7.3:5612936-5612955 | None:intergenic | 40.0% | |
| CTTGCTTAAGAGCTCTTTCA+CGG | + | chr7.3:5612506-5612525 | None:intergenic | 40.0% | |
| GAAAGCAAGGAAGATGAGAT+TGG | - | chr7.3:5612842-5612861 | MS.gene072716:CDS | 40.0% | |
| GAAGACTCGAAATGAAAGCT+GGG | + | chr7.3:5612399-5612418 | None:intergenic | 40.0% | |
| GATCGAGGTGATTACAAATC+TGG | - | chr7.3:5612786-5612805 | MS.gene072716:CDS | 40.0% | |
| GCAAACAATTGCCAGTGAAA+AGG | - | chr7.3:5612626-5612645 | MS.gene072716:CDS | 40.0% | |
| TACAAGGAAACTGGTTACTG+TGG | - | chr7.3:5612735-5612754 | MS.gene072716:CDS | 40.0% | |
| TAGCAAAGCAACAGCAACTT+TGG | - | chr7.3:5612443-5612462 | MS.gene072716:CDS | 40.0% | |
| TGCAAGGATTACAAGGAAAC+TGG | - | chr7.3:5612726-5612745 | MS.gene072716:CDS | 40.0% | |
| TTGAGACAGGATCCACAAAT+GGG | + | chr7.3:5612962-5612981 | None:intergenic | 40.0% | |
| ACAATTGCCAGTGAAAAGGC+TGG | - | chr7.3:5612630-5612649 | MS.gene072716:CDS | 45.0% | |
| CTTAAGAGCTCTTTCACGGA+TGG | + | chr7.3:5612502-5612521 | None:intergenic | 45.0% | |
| GAAACTGGTTACTGTGGGTA+TGG | - | chr7.3:5612741-5612760 | MS.gene072716:CDS | 45.0% | |
| GAGGTGATTACAAATCTGGG+TGG | - | chr7.3:5612790-5612809 | MS.gene072716:CDS | 45.0% | |
| GATACGAAAGAAGATGGCTG+AGG | - | chr7.3:5613213-5613232 | MS.gene072716:CDS | 45.0% | |
| GTGGCAGATGGAGAAAGAAT+GGG | - | chr7.3:5612809-5612828 | MS.gene072716:CDS | 45.0% | |
| GTTGAGACAGGATCCACAAA+TGG | + | chr7.3:5612963-5612982 | None:intergenic | 45.0% | |
| TGCTTACACTTGGTTGAGAC+AGG | + | chr7.3:5612975-5612994 | None:intergenic | 45.0% | |
| TTACAAATCTGGGTGGCAGA+TGG | - | chr7.3:5612797-5612816 | MS.gene072716:CDS | 45.0% | |
| ! | AGTCTCAAGGGAAAGAGTAC+TGG | - | chr7.3:5612534-5612553 | MS.gene072716:CDS | 45.0% |
| ! | CTGTGAGCATTGTGCATTGA+AGG | - | chr7.3:5613001-5613020 | MS.gene072716:CDS | 45.0% |
| ACATACCTTGTTCAGTCGGC+TGG | + | chr7.3:5612064-5612083 | None:intergenic | 50.0% | |
| ATTGCCAGTGAAAAGGCTGG+TGG | - | chr7.3:5612633-5612652 | MS.gene072716:CDS | 50.0% | |
| CAAGCGACTGAGAGTCTCAA+GGG | - | chr7.3:5612522-5612541 | MS.gene072716:CDS | 50.0% | |
| GAAAACCAGCCGACTGAACA+AGG | - | chr7.3:5612056-5612075 | MS.gene072716:CDS | 50.0% | |
| GGGATGAAGCTGAGAAAGCA+AGG | - | chr7.3:5612829-5612848 | MS.gene072716:CDS | 50.0% | |
| GGTGGCAGATGGAGAAAGAA+TGG | - | chr7.3:5612808-5612827 | MS.gene072716:CDS | 50.0% | |
| TTGCCAGTGAAAAGGCTGGT+GGG | - | chr7.3:5612634-5612653 | MS.gene072716:CDS | 50.0% | |
| ! | AGGAAGATGAGATTGGCTGC+AGG | - | chr7.3:5612849-5612868 | MS.gene072716:CDS | 50.0% |
| !!! | CGGCTGGTTTTCAGCAGATT+TGG | + | chr7.3:5612048-5612067 | None:intergenic | 50.0% |
| AGCTCTTTCACGGATGGCAC+GGG | + | chr7.3:5612496-5612515 | None:intergenic | 55.0% | |
| ATTGGCTGCAGGTGAGGATG+CGG | - | chr7.3:5612860-5612879 | MS.gene072716:CDS | 55.0% | |
| GAGCTCTTTCACGGATGGCA+CGG | + | chr7.3:5612497-5612516 | None:intergenic | 55.0% | |
| GCAAGCGACTGAGAGTCTCA+AGG | - | chr7.3:5612521-5612540 | MS.gene072716:CDS | 55.0% | |
| GTCTGCAATCAGCCTACGCT+TGG | - | chr7.3:5613169-5613188 | MS.gene072716:intron | 55.0% | |
| TGCAGAGCTCTTCGAAGAGC+CGG | + | chr7.3:5612346-5612365 | None:intergenic | 55.0% | |
| ! | GAAAAGGCTGGTGGGTCACA+CGG | - | chr7.3:5612642-5612661 | MS.gene072716:CDS | 55.0% |
| ! | GATGAGATTGGCTGCAGGTG+AGG | - | chr7.3:5612854-5612873 | MS.gene072716:CDS | 55.0% |
| ! | TGACCCACCAGCCTTTTCAC+TGG | + | chr7.3:5612640-5612659 | None:intergenic | 55.0% |
| !! | GGGAAAGAGTACTGGTTCCG+AGG | - | chr7.3:5612542-5612561 | MS.gene072716:CDS | 55.0% |
| ACACGGTCCTCTCAGGGCTT+CGG | - | chr7.3:5612659-5612678 | MS.gene072716:CDS | 60.0% | |
| AGAGCTCTTCGAAGAGCCGG+TGG | + | chr7.3:5612343-5612362 | None:intergenic | 60.0% | |
| ATGTGAGCCGAAGCCCTGAG+AGG | + | chr7.3:5612669-5612688 | None:intergenic | 60.0% | |
| GGTGAGGATGCGGAAGAGGA+AGG | - | chr7.3:5612870-5612889 | MS.gene072716:CDS | 60.0% | |
| TGCAGGTGAGGATGCGGAAG+AGG | - | chr7.3:5612866-5612885 | MS.gene072716:CDS | 60.0% | |
| TGGGTCACACGGTCCTCTCA+GGG | - | chr7.3:5612653-5612672 | MS.gene072716:CDS | 60.0% | |
| GTGGGTCACACGGTCCTCTC+AGG | - | chr7.3:5612652-5612671 | MS.gene072716:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5612029 | 5613243 | 5612029 | ID=MS.gene072716 |
| chr7.3 | mRNA | 5612029 | 5613243 | 5612029 | ID=MS.gene072716.t1;Parent=MS.gene072716 |
| chr7.3 | exon | 5613195 | 5613243 | 5613195 | ID=MS.gene072716.t1.exon1;Parent=MS.gene072716.t1 |
| chr7.3 | CDS | 5613195 | 5613243 | 5613195 | ID=cds.MS.gene072716.t1;Parent=MS.gene072716.t1 |
| chr7.3 | exon | 5612250 | 5613082 | 5612250 | ID=MS.gene072716.t1.exon2;Parent=MS.gene072716.t1 |
| chr7.3 | CDS | 5612250 | 5613082 | 5612250 | ID=cds.MS.gene072716.t1;Parent=MS.gene072716.t1 |
| chr7.3 | exon | 5612029 | 5612130 | 5612029 | ID=MS.gene072716.t1.exon3;Parent=MS.gene072716.t1 |
| chr7.3 | CDS | 5612029 | 5612130 | 5612029 | ID=cds.MS.gene072716.t1;Parent=MS.gene072716.t1 |
| Gene Sequence |
| Protein sequence |
