Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073784.t1 | XP_013468242.1 | 82.3 | 586 | 104 | 0 | 1 | 586 | 1 | 586 | 6.20E-123 | 451.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073784.t1 | Q9ZQC5 | 34.8 | 624 | 328 | 11 | 1 | 586 | 1 | 583 | 1.5e-29 | 132.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073784.t1 | A0A072VJQ3 | 82.3 | 586 | 104 | 0 | 1 | 586 | 1 | 586 | 4.5e-123 | 451.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene073784 | 0.828829 | 7.23E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene073784 | 0.82419 | 9.23E-54 | -1.69E-46 |
| MS.gene053538 | MS.gene073784 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene073784 | 0.833751 | 4.46E-56 | -1.69E-46 |
| MS.gene056228 | MS.gene073784 | 0.822307 | 2.54E-53 | -1.69E-46 |
| MS.gene058206 | MS.gene073784 | 0.80724 | 5.57E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene073784 | 0.822904 | 1.85E-53 | -1.69E-46 |
| MS.gene060962 | MS.gene073784 | 0.80104 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030154 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene064148 | PPI |
| MS.gene073784 | MS.gene009801 | PPI |
| MS.gene073784 | MS.gene05775 | PPI |
| MS.gene073784 | MS.gene56986 | PPI |
| MS.gene073784 | MS.gene065074 | PPI |
| MS.gene23912 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene39455 | PPI |
| MS.gene073784 | MS.gene31961 | PPI |
| MS.gene073784 | MS.gene037356 | PPI |
| MS.gene33795 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene39229 | PPI |
| MS.gene073784 | MS.gene76250 | PPI |
| MS.gene073784 | MS.gene029217 | PPI |
| MS.gene54155 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene063692 | PPI |
| MS.gene048551 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene029219 | PPI |
| MS.gene50208 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene68625 | PPI |
| MS.gene008635 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene57038 | PPI |
| MS.gene03912 | MS.gene073784 | PPI |
| MS.gene93135 | MS.gene073784 | PPI |
| MS.gene020474 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene015702 | PPI |
| MS.gene26785 | MS.gene073784 | PPI |
| MS.gene31930 | MS.gene073784 | PPI |
| MS.gene073784 | MS.gene034650 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073784.t1 | MTR_1g066850 | 96.416 | 586 | 21 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1117 |
| MS.gene073784.t1 | MTR_7g100730 | 61.897 | 622 | 189 | 7 | 1 | 586 | 1 | 610 | 0.0 | 632 |
| MS.gene073784.t1 | MTR_4g461060 | 44.374 | 631 | 289 | 9 | 1 | 583 | 1 | 617 | 3.58e-134 | 405 |
| MS.gene073784.t1 | MTR_4g461060 | 44.249 | 626 | 287 | 9 | 6 | 583 | 3 | 614 | 3.15e-132 | 400 |
| MS.gene073784.t1 | MTR_7g061150 | 62.567 | 374 | 96 | 5 | 245 | 586 | 2 | 363 | 2.39e-126 | 376 |
| MS.gene073784.t1 | MTR_2g093260 | 41.763 | 431 | 182 | 10 | 191 | 583 | 83 | 482 | 4.43e-69 | 231 |
| MS.gene073784.t1 | MTR_5g007350 | 29.304 | 273 | 145 | 9 | 12 | 250 | 38 | 296 | 6.94e-14 | 75.5 |
| MS.gene073784.t1 | MTR_2g093240 | 34.483 | 116 | 41 | 2 | 471 | 586 | 1 | 81 | 7.13e-14 | 67.8 |
| MS.gene073784.t1 | MTR_4g478190 | 27.829 | 327 | 190 | 11 | 7 | 287 | 8 | 334 | 7.77e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073784.t1 | AT2G37080 | 46.094 | 640 | 232 | 13 | 1 | 586 | 1 | 581 | 9.54e-147 | 436 |
| MS.gene073784.t1 | AT2G37080 | 45.950 | 642 | 232 | 14 | 1 | 586 | 1 | 583 | 8.93e-145 | 431 |
| MS.gene073784.t1 | AT2G37080 | 45.950 | 642 | 232 | 14 | 1 | 586 | 1 | 583 | 8.93e-145 | 431 |
| MS.gene073784.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 6.64e-106 | 330 |
| MS.gene073784.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 6.64e-106 | 330 |
| MS.gene073784.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 6.64e-106 | 330 |
| MS.gene073784.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 6.64e-106 | 330 |
| MS.gene073784.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.42e-101 | 319 |
| MS.gene073784.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.42e-101 | 319 |
| MS.gene073784.t1 | AT3G53350 | 37.888 | 322 | 147 | 11 | 1 | 296 | 1 | 295 | 7.35e-45 | 164 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 176 | 394 | 5.05e-30 | 122 |
| MS.gene073784.t1 | AT3G53350 | 37.888 | 322 | 147 | 11 | 1 | 296 | 1 | 295 | 7.35e-45 | 164 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 176 | 394 | 5.05e-30 | 122 |
| MS.gene073784.t1 | AT3G53350 | 37.654 | 324 | 147 | 12 | 1 | 296 | 1 | 297 | 5.80e-43 | 159 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 178 | 396 | 6.31e-30 | 122 |
| MS.gene073784.t1 | AT3G53350 | 37.654 | 324 | 147 | 12 | 1 | 296 | 1 | 297 | 5.80e-43 | 159 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 178 | 396 | 6.31e-30 | 122 |
| MS.gene073784.t1 | AT3G53350 | 37.654 | 324 | 147 | 12 | 1 | 296 | 1 | 297 | 5.80e-43 | 159 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 178 | 396 | 6.31e-30 | 122 |
| MS.gene073784.t1 | AT3G53350 | 50.811 | 185 | 64 | 6 | 7 | 185 | 18 | 181 | 3.74e-42 | 157 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 187 | 405 | 1.10e-29 | 121 |
| MS.gene073784.t1 | AT3G53350 | 50.267 | 187 | 64 | 7 | 7 | 185 | 18 | 183 | 2.41e-40 | 152 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 189 | 407 | 1.26e-29 | 121 |
| MS.gene073784.t1 | AT3G53350 | 50.267 | 187 | 64 | 7 | 7 | 185 | 18 | 183 | 2.41e-40 | 152 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 189 | 407 | 1.26e-29 | 121 |
| MS.gene073784.t1 | AT3G53350 | 44.344 | 221 | 66 | 7 | 1 | 185 | 1 | 200 | 6.08e-39 | 148 |
| MS.gene073784.t1 | AT3G53350 | 33.438 | 320 | 104 | 8 | 275 | 586 | 206 | 424 | 4.22e-29 | 120 |
| MS.gene073784.t1 | AT1G78430 | 38.418 | 177 | 93 | 4 | 411 | 586 | 162 | 323 | 1.30e-21 | 96.7 |
| MS.gene073784.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.14e-14 | 74.7 |
| MS.gene073784.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.14e-14 | 74.7 |
| MS.gene073784.t1 | AT5G16730 | 28.646 | 384 | 207 | 14 | 19 | 346 | 24 | 396 | 8.78e-12 | 68.6 |
Find 108 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCCATTGAATGCTGTTTC+TGG | 0.130935 | 1.1:-49277220 | None:intergenic |
| GGCTACAACAATTCTATTAT+TGG | 0.202521 | 1.1:+49278367 | MS.gene073784:CDS |
| CTTTGTGTTGACTTGACATT+TGG | 0.212610 | 1.1:-49276677 | None:intergenic |
| ACATTTGGGCTCCTATCTTT+TGG | 0.249382 | 1.1:-49276662 | None:intergenic |
| TGCTGCACAGGCGTCGAATT+TGG | 0.249460 | 1.1:+49278210 | MS.gene073784:CDS |
| ACAACAATGTTGAAGAAAAT+TGG | 0.253316 | 1.1:+49278451 | MS.gene073784:CDS |
| GGAATCACAGCGGCAACTTC+TGG | 0.253438 | 1.1:+49277106 | MS.gene073784:CDS |
| TCTAGAAGAACGGAACAAAT+AGG | 0.282502 | 1.1:+49276931 | MS.gene073784:intron |
| TGGAGTTAGAGGCTGAATTA+AGG | 0.285638 | 1.1:+49278230 | MS.gene073784:CDS |
| AACAAATAGGGTACAAGAAT+TGG | 0.301512 | 1.1:+49276944 | MS.gene073784:CDS |
| TTAAAATGTACCTCAGATAT+TGG | 0.304349 | 1.1:-49276701 | None:intergenic |
| ATTTGAAGGAGATTTCTTTC+GGG | 0.319999 | 1.1:-49276558 | None:intergenic |
| TGAGTTGAAGGCAAGATTAT+TGG | 0.325711 | 1.1:+49277967 | MS.gene073784:CDS |
| AATTCGCTCATCTTCAGAAT+TGG | 0.329594 | 1.1:-49277135 | None:intergenic |
| TTCTAATCTGCAATGTGCTT+TGG | 0.333283 | 1.1:-49277793 | None:intergenic |
| GAGCAAACTTCAGGAGGATT+TGG | 0.333490 | 1.1:+49277610 | MS.gene073784:CDS |
| GATTTGAAGGAGATTTCTTT+CGG | 0.346603 | 1.1:-49276559 | None:intergenic |
| GCTGCTGCTATGATTTCTTC+TGG | 0.352673 | 1.1:+49278298 | MS.gene073784:CDS |
| AGAGTTAAGGGCACAATTGA+TGG | 0.353098 | 1.1:+49277910 | MS.gene073784:CDS |
| CTGACTCAGCATTGTCAATC+CGG | 0.380906 | 1.1:-49277322 | None:intergenic |
| AAGCCGATGTTGAAGAGTTA+AGG | 0.383364 | 1.1:+49277897 | MS.gene073784:CDS |
| TTTGTGTTGACTTGACATTT+GGG | 0.392895 | 1.1:-49276676 | None:intergenic |
| CTTTAGAGTTAGAGAAATCA+AGG | 0.395892 | 1.1:+49277558 | MS.gene073784:CDS |
| CAAATAAAACTCCAAAAGAT+AGG | 0.409278 | 1.1:+49276651 | MS.gene073784:CDS |
| GGAACTTGTGAGCAAACTTC+AGG | 0.419432 | 1.1:+49277601 | MS.gene073784:CDS |
| TCATCAGTTTCTTCTGCATA+AGG | 0.424746 | 1.1:-49278406 | None:intergenic |
| ATCTCCTCGCTTACCTGCAT+TGG | 0.427114 | 1.1:+49277649 | MS.gene073784:CDS |
| CTAGAAGAACGGAACAAATA+GGG | 0.430567 | 1.1:+49276932 | MS.gene073784:intron |
| AGAACTAAGGAAAATTTCTC+AGG | 0.434914 | 1.1:+49277160 | MS.gene073784:CDS |
| GTGAGCAGAAATGGTGCATC+AGG | 0.435653 | 1.1:+49276530 | MS.gene073784:intron |
| TAGTACAACTCAAGTGCAAT+TGG | 0.442662 | 1.1:+49277463 | MS.gene073784:CDS |
| ACGACTGGAGAACACGAAAT+CGG | 0.446862 | 1.1:+49277826 | MS.gene073784:CDS |
| TTGCTTCCGCTGAGGCAGCA+AGG | 0.447445 | 1.1:+49278092 | MS.gene073784:CDS |
| GTGGAAACGCTCCGATTAGA+AGG | 0.448481 | 1.1:+49277503 | MS.gene073784:CDS |
| ATTGTCAATCCGGGTAGCTT+CGG | 0.452103 | 1.1:-49277312 | None:intergenic |
| CGAGCAGTCCGAGGATTTGA+AGG | 0.453421 | 1.1:-49276572 | None:intergenic |
| AGCCGATGTTGAAGAGTTAA+GGG | 0.459023 | 1.1:+49277898 | MS.gene073784:CDS |
| GGCGTCGAATTTGGAGTTAG+AGG | 0.460422 | 1.1:+49278219 | MS.gene073784:CDS |
| TTTATCCATGTCAAGAGAGT+TGG | 0.461170 | 1.1:+49277082 | MS.gene073784:CDS |
| GCTCGCAAGACGAAGTCATC+AGG | 0.465959 | 1.1:+49276590 | MS.gene073784:CDS |
| GTTTCAGTTAAAGCTGAAGC+AGG | 0.470076 | 1.1:+49277716 | MS.gene073784:CDS |
| AGAATCTGAATCACAGGCAT+TGG | 0.474276 | 1.1:+49277433 | MS.gene073784:CDS |
| ATCCATGTCAAGAGAGTTGG+AGG | 0.474312 | 1.1:+49277085 | MS.gene073784:CDS |
| CAGTTACACGTGCTATCATT+CGG | 0.476141 | 1.1:-49278177 | None:intergenic |
| GAGGATTTGGTCAGTAGAGT+TGG | 0.478149 | 1.1:+49277623 | MS.gene073784:CDS |
| AGCAAGGGCCGCAGAGCGAG+AGG | 0.479702 | 1.1:+49278108 | MS.gene073784:CDS |
| TGCTTCCGCTGAGGCAGCAA+GGG | 0.480232 | 1.1:+49278093 | MS.gene073784:CDS |
| AGAGAACAATACACTTAAGA+TGG | 0.481927 | 1.1:+49278021 | MS.gene073784:CDS |
| CGTGTTCTCCAGTCGTTCAA+AGG | 0.483336 | 1.1:-49277819 | None:intergenic |
| TAGAAGTGCCTTTGAACGAC+TGG | 0.486503 | 1.1:+49277811 | MS.gene073784:CDS |
| ACTGAAAATGCAACTTGAAA+GGG | 0.492360 | 1.1:+49277280 | MS.gene073784:CDS |
| CAGACTGCCATTCTCGATCT+CGG | 0.499415 | 1.1:-49277184 | None:intergenic |
| TGCCCTTAACTCTTCAACAT+CGG | 0.502854 | 1.1:-49277900 | None:intergenic |
| AAACAAGCTCGGCTTTGAGC+CGG | 0.506146 | 1.1:-49277697 | None:intergenic |
| TTTCTCTAACTCTAAAGCTA+AGG | 0.508714 | 1.1:-49277552 | None:intergenic |
| AAGACAAGCTGAATTATATG+AGG | 0.509050 | 1.1:+49277859 | MS.gene073784:CDS |
| TGCGGCCCTTGCTGCCTCAG+CGG | 0.514799 | 1.1:-49278098 | None:intergenic |
| AGCTTTAACTGAAACAAGCT+CGG | 0.514900 | 1.1:-49277708 | None:intergenic |
| TAGAAAGCGAGGAGATAAAC+CGG | 0.516380 | 1.1:+49277678 | MS.gene073784:CDS |
| TAGTGATGTGGCTGAGTTGA+AGG | 0.519057 | 1.1:+49277955 | MS.gene073784:CDS |
| CTCAGGACCGAGATCGAGAA+TGG | 0.519589 | 1.1:+49277177 | MS.gene073784:CDS |
| CTTTCTACAACTTCCAATGC+AGG | 0.520191 | 1.1:-49277662 | None:intergenic |
| AACTGAAAATGCAACTTGAA+AGG | 0.523112 | 1.1:+49277279 | MS.gene073784:CDS |
| ATGAGCGAATTCAAGAACTA+AGG | 0.533335 | 1.1:+49277147 | MS.gene073784:CDS |
| AGGCTGAAGATGCAAAGAAT+CGG | 0.535803 | 1.1:+49277057 | MS.gene073784:CDS |
| CACGTGAATCCGAAGCTACC+CGG | 0.535832 | 1.1:+49277303 | MS.gene073784:CDS |
| GAAGAATAAAATCACGGATG+AGG | 0.536894 | 1.1:+49278066 | MS.gene073784:CDS |
| TGAAAGTTCAGTCAGATCAA+TGG | 0.538570 | 1.1:+49278257 | MS.gene073784:CDS |
| AGAAATCTCCTTCAAATCCT+CGG | 0.539368 | 1.1:+49276564 | MS.gene073784:CDS |
| CTAACTCTAAAGCTAAGGAT+TGG | 0.544112 | 1.1:-49277547 | None:intergenic |
| ATTTCTTCTGGAAACAACAA+TGG | 0.545987 | 1.1:+49278310 | MS.gene073784:CDS |
| TTGTAGAGAATCTGAATCAC+AGG | 0.546987 | 1.1:+49277427 | MS.gene073784:CDS |
| TTATTTGCTGGGTTTGAAGA+CGG | 0.550271 | 1.1:-49276635 | None:intergenic |
| AAGGTCTCAAGTAAACTCAC+TGG | 0.551394 | 1.1:+49277577 | MS.gene073784:CDS |
| TGAGGAGTTAGATGCTGCAC+AGG | 0.555058 | 1.1:+49278198 | MS.gene073784:CDS |
| TTTGTCTACCTCTAGAAGAA+CGG | 0.558111 | 1.1:+49276921 | MS.gene073784:intron |
| AGTCCAGAAACAGCATTCAA+TGG | 0.565946 | 1.1:+49277217 | MS.gene073784:CDS |
| ATCTGCATTGGATGCTGCCG+AGG | 0.566446 | 1.1:+49277748 | MS.gene073784:CDS |
| TAAGATGGAAATAAAGAGAG+AGG | 0.579267 | 1.1:+49278036 | MS.gene073784:CDS |
| TGACTCAGCATTGTCAATCC+GGG | 0.580031 | 1.1:-49277321 | None:intergenic |
| AGGGCAGTTAAAATCTGCAT+TGG | 0.583728 | 1.1:+49277736 | MS.gene073784:CDS |
| TGAAGAAAATTGGAGTGTTG+TGG | 0.584300 | 1.1:+49278461 | MS.gene073784:CDS |
| ATGCTGAGATTCAAGACTTG+AGG | 0.592935 | 1.1:+49277348 | MS.gene073784:CDS |
| TTCGTCTTGCGAGCAGTCCG+AGG | 0.602923 | 1.1:-49276581 | None:intergenic |
| GTTAGAGAAGAATAAAATCA+CGG | 0.606698 | 1.1:+49278060 | MS.gene073784:CDS |
| TTCCTCCAACTCTCTTGACA+TGG | 0.607195 | 1.1:-49277087 | None:intergenic |
| GGGTACAAGAATTGGAGTCT+CGG | 0.608303 | 1.1:+49276952 | MS.gene073784:CDS |
| GTGATTCAGATTCTCTACAA+TGG | 0.621611 | 1.1:-49277424 | None:intergenic |
| CTCGTTCTGATATCTTACCT+CGG | 0.626347 | 1.1:-49277765 | None:intergenic |
| ACTTGTGAGCAAACTTCAGG+AGG | 0.628772 | 1.1:+49277604 | MS.gene073784:CDS |
| TTTGAAGGAGATTTCTTTCG+GGG | 0.632584 | 1.1:-49276557 | None:intergenic |
| AGAATGGCAGTCTGAACTAG+AGG | 0.632763 | 1.1:+49277193 | MS.gene073784:CDS |
| ACTTCCAATGCAGGTAAGCG+AGG | 0.632899 | 1.1:-49277653 | None:intergenic |
| GTCTCAAGTAAACTCACTGG+AGG | 0.639006 | 1.1:+49277580 | MS.gene073784:CDS |
| TGAGGCTGTTGCTTCCGCTG+AGG | 0.639415 | 1.1:+49278084 | MS.gene073784:CDS |
| GAAGATAAAAGCTCAACATG+AGG | 0.639716 | 1.1:+49277037 | MS.gene073784:CDS |
| TGAGATTCAAGACTTGAGGA+TGG | 0.640348 | 1.1:+49277352 | MS.gene073784:CDS |
| TTTCAGTTAAAGCTGAAGCA+GGG | 0.641574 | 1.1:+49277717 | MS.gene073784:CDS |
| AACACAAAGTCCAATATCTG+AGG | 0.651330 | 1.1:+49276691 | MS.gene073784:CDS |
| AAGTTCAGTCAGATCAATGG+AGG | 0.671435 | 1.1:+49278260 | MS.gene073784:CDS |
| AATGATAGCACGTGTAACTG+AGG | 0.673722 | 1.1:+49278180 | MS.gene073784:CDS |
| ATTGGAAGTTGTAGAAAGCG+AGG | 0.674711 | 1.1:+49277667 | MS.gene073784:CDS |
| TGGGTTTGAAGACGGCGAAG+CGG | 0.683336 | 1.1:-49276627 | None:intergenic |
| GGAAGCTGCAAATAAGACAG+TGG | 0.693575 | 1.1:+49277484 | MS.gene073784:CDS |
| TGTCAAAGCCTCTCGCTCTG+CGG | 0.698809 | 1.1:-49278116 | None:intergenic |
| AGAACTGGTTCACTTGACAG+TGG | 0.718014 | 1.1:+49278346 | MS.gene073784:CDS |
| TCATTTGCAAGATAGTGATG+TGG | 0.731331 | 1.1:+49277943 | MS.gene073784:CDS |
| GAGAGTTGGAGGAATCACAG+CGG | 0.814737 | 1.1:+49277096 | MS.gene073784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATACATTCTATTTAA+TGG | - | chr1.1:49276125-49276144 | None:intergenic | 10.0% |
| !! | TGTTTATGAAAAATATTAAT+TGG | + | chr1.1:49276275-49276294 | MS.gene073784:intron | 10.0% |
| !!! | AAACAATTGTAAATATTTTT+GGG | + | chr1.1:49276068-49276087 | MS.gene073784:intron | 10.0% |
| !!! | AATTAATATTTTTCATAAAC+AGG | - | chr1.1:49276276-49276295 | None:intergenic | 10.0% |
| !!! | CAAACAATTGTAAATATTTT+TGG | + | chr1.1:49276067-49276086 | MS.gene073784:intron | 15.0% |
| !! | AAACAACAATGGAAAAATTA+TGG | + | chr1.1:49278321-49278340 | MS.gene073784:CDS | 20.0% |
| !! | ATTGTTTGAATACTGAATAA+TGG | - | chr1.1:49276055-49276074 | None:intergenic | 20.0% |
| !! | TGGTTGTACTATAATTTATA+AGG | + | chr1.1:49275921-49275940 | MS.gene073784:intron | 20.0% |
| !!! | AAATATTGTTGTTTCATAGA+AGG | - | chr1.1:49276313-49276332 | None:intergenic | 20.0% |
| !!! | AATATTGTTGTTTCATAGAA+GGG | - | chr1.1:49276312-49276331 | None:intergenic | 20.0% |
| !!! | ATTATTTCTTCAGATTTCTT+TGG | - | chr1.1:49276163-49276182 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTTTCTTCTT+AGG | - | chr1.1:49278439-49278458 | None:intergenic | 20.0% |
| !!! | CTATGAAACAACAATATTTT+GGG | + | chr1.1:49276314-49276333 | MS.gene073784:intron | 20.0% |
| !!! | TCTATGAAACAACAATATTT+TGG | + | chr1.1:49276313-49276332 | MS.gene073784:intron | 20.0% |
| !!! | TTTTCTTATAAGTAGTGAAT+AGG | - | chr1.1:49276220-49276239 | None:intergenic | 20.0% |
| ! | AATTATATAGGGTCTAAATG+AGG | + | chr1.1:49275867-49275886 | MS.gene073784:intron | 25.0% |
| ! | AATTGCAAAGATGAAAAATG+AGG | + | chr1.1:49277397-49277416 | MS.gene073784:CDS | 25.0% |
| ! | ACAACAATGTTGAAGAAAAT+TGG | + | chr1.1:49278451-49278470 | MS.gene073784:CDS | 25.0% |
| ! | ATTATATAGGGTCTAAATGA+GGG | + | chr1.1:49275868-49275887 | MS.gene073784:intron | 25.0% |
| ! | CAAATAAAACTCCAAAAGAT+AGG | + | chr1.1:49276651-49276670 | MS.gene073784:CDS | 25.0% |
| ! | GAAATTACCAATAATCACAA+TGG | - | chr1.1:49276752-49276771 | None:intergenic | 25.0% |
| ! | GTTAGAGAAGAATAAAATCA+CGG | + | chr1.1:49278060-49278079 | MS.gene073784:CDS | 25.0% |
| ! | TCAATTCCATGAATACAAAT+AGG | - | chr1.1:49275988-49276007 | None:intergenic | 25.0% |
| ! | TCACTACTTATAAGAAAACT+AGG | + | chr1.1:49276222-49276241 | MS.gene073784:intron | 25.0% |
| ! | TTAAAATGTACCTCAGATAT+TGG | - | chr1.1:49276704-49276723 | None:intergenic | 25.0% |
| ! | TTACCACAATATGATTCATT+AGG | - | chr1.1:49276191-49276210 | None:intergenic | 25.0% |
| ! | TTACTGAAATATGACTTACA+AGG | - | chr1.1:49276026-49276045 | None:intergenic | 25.0% |
| !! | TAAGCATGTTGATTGAAATA+TGG | + | chr1.1:49276501-49276520 | MS.gene073784:intron | 25.0% |
| !! | TGTGATTATTGGTAATTTCA+TGG | + | chr1.1:49276753-49276772 | MS.gene073784:intron | 25.0% |
| !!! | ATATTTTTGGGATCTAATTG+AGG | + | chr1.1:49276080-49276099 | MS.gene073784:intron | 25.0% |
| !!! | CTTATTTTATTCAGTAGGTT+TGG | + | chr1.1:49275901-49275920 | MS.gene073784:intron | 25.0% |
| !!! | TTGCTCTTATTTTATTCAGT+AGG | + | chr1.1:49275896-49275915 | MS.gene073784:intron | 25.0% |
| AACAAATAGGGTACAAGAAT+TGG | + | chr1.1:49276944-49276963 | MS.gene073784:CDS | 30.0% | |
| AACTGAAAATGCAACTTGAA+AGG | + | chr1.1:49277279-49277298 | MS.gene073784:CDS | 30.0% | |
| AAGACAAGCTGAATTATATG+AGG | + | chr1.1:49277859-49277878 | MS.gene073784:CDS | 30.0% | |
| AATATGACTTACAAGGAGTT+CGG | - | chr1.1:49276019-49276038 | None:intergenic | 30.0% | |
| ACTGAAAATGCAACTTGAAA+GGG | + | chr1.1:49277280-49277299 | MS.gene073784:CDS | 30.0% | |
| AGAACTAAGGAAAATTTCTC+AGG | + | chr1.1:49277160-49277179 | MS.gene073784:CDS | 30.0% | |
| AGAGAACAATACACTTAAGA+TGG | + | chr1.1:49278021-49278040 | MS.gene073784:CDS | 30.0% | |
| ATCTACACAAGAAGAGTTAT+AGG | - | chr1.1:49276366-49276385 | None:intergenic | 30.0% | |
| ATTTGAAGGAGATTTCTTTC+GGG | - | chr1.1:49276561-49276580 | None:intergenic | 30.0% | |
| CATTTACACATATCACAATG+AGG | - | chr1.1:49276450-49276469 | None:intergenic | 30.0% | |
| GATTTGAAGGAGATTTCTTT+CGG | - | chr1.1:49276562-49276581 | None:intergenic | 30.0% | |
| GGAATAGATAACTAGATACT+TGG | + | chr1.1:49276783-49276802 | MS.gene073784:intron | 30.0% | |
| GGCTACAACAATTCTATTAT+TGG | + | chr1.1:49278367-49278386 | MS.gene073784:CDS | 30.0% | |
| GTCTTCAGTCGAATTATATA+GGG | + | chr1.1:49275856-49275875 | MS.gene073784:intron | 30.0% | |
| TAAGATGGAAATAAAGAGAG+AGG | + | chr1.1:49278036-49278055 | MS.gene073784:CDS | 30.0% | |
| TAGAGGCAATATATTCATGA+AGG | - | chr1.1:49276823-49276842 | None:intergenic | 30.0% | |
| TATATAATTCGACTGAAGAC+AGG | - | chr1.1:49275856-49275875 | None:intergenic | 30.0% | |
| TGCAAATTTCTTGAATAGAG+TGG | - | chr1.1:49276390-49276409 | None:intergenic | 30.0% | |
| TGTCCTAATGAATCATATTG+TGG | + | chr1.1:49276185-49276204 | MS.gene073784:intron | 30.0% | |
| TGTCTTCAGTCGAATTATAT+AGG | + | chr1.1:49275855-49275874 | MS.gene073784:intron | 30.0% | |
| TTTGAGCCTATTTGTATTCA+TGG | + | chr1.1:49275979-49275998 | MS.gene073784:intron | 30.0% | |
| ! | AGCTTTTATCTTCAATGACT+CGG | - | chr1.1:49277030-49277049 | None:intergenic | 30.0% |
| ! | ATGCTGCAAAAGTATGAAAT+AGG | - | chr1.1:49275821-49275840 | None:intergenic | 30.0% |
| ! | ATTTCTTCTGGAAACAACAA+TGG | + | chr1.1:49278310-49278329 | MS.gene073784:CDS | 30.0% |
| ! | CATGTTGATTGAAATATGGT+TGG | + | chr1.1:49276505-49276524 | MS.gene073784:intron | 30.0% |
| ! | CATTCTATTTAATGGACCAA+AGG | - | chr1.1:49276117-49276136 | None:intergenic | 30.0% |
| !! | CTTTAGAGTTAGAGAAATCA+AGG | + | chr1.1:49277558-49277577 | MS.gene073784:CDS | 30.0% |
| !! | GAAACAACAATATTTTGGGA+AGG | + | chr1.1:49276318-49276337 | MS.gene073784:intron | 30.0% |
| !! | GGATTGTCTTGTTTCTTTAT+TGG | + | chr1.1:49276339-49276358 | MS.gene073784:intron | 30.0% |
| !! | TTAGATTTTGCTATGCATAG+AGG | - | chr1.1:49276840-49276859 | None:intergenic | 30.0% |
| !! | TTTCTCTAACTCTAAAGCTA+AGG | - | chr1.1:49277555-49277574 | None:intergenic | 30.0% |
| !! | TTTGTGTTGACTTGACATTT+GGG | - | chr1.1:49276679-49276698 | None:intergenic | 30.0% |
| !!! | CTTTTGGAGTTTTATTTGCT+GGG | - | chr1.1:49276649-49276668 | None:intergenic | 30.0% |
| !!! | TCTTTTGGAGTTTTATTTGC+TGG | - | chr1.1:49276650-49276669 | None:intergenic | 30.0% |
| AACACAAAGTCCAATATCTG+AGG | + | chr1.1:49276691-49276710 | MS.gene073784:CDS | 35.0% | |
| AATAATCACAATGGCACCAA+AGG | - | chr1.1:49276743-49276762 | None:intergenic | 35.0% | |
| AATTCGCTCATCTTCAGAAT+TGG | - | chr1.1:49277138-49277157 | None:intergenic | 35.0% | |
| AGAAATCTCCTTCAAATCCT+CGG | + | chr1.1:49276564-49276583 | MS.gene073784:CDS | 35.0% | |
| AGAGGTAGACAAAAATGTCA+AGG | - | chr1.1:49276914-49276933 | None:intergenic | 35.0% | |
| ATGAGCGAATTCAAGAACTA+AGG | + | chr1.1:49277147-49277166 | MS.gene073784:CDS | 35.0% | |
| CTAGAAGAACGGAACAAATA+GGG | + | chr1.1:49276932-49276951 | MS.gene073784:intron | 35.0% | |
| GAAGAATAAAATCACGGATG+AGG | + | chr1.1:49278066-49278085 | MS.gene073784:CDS | 35.0% | |
| GAAGATAAAAGCTCAACATG+AGG | + | chr1.1:49277037-49277056 | MS.gene073784:CDS | 35.0% | |
| GGAAAAATTATGGAGAGAAC+TGG | + | chr1.1:49278331-49278350 | MS.gene073784:CDS | 35.0% | |
| GTGATTCAGATTCTCTACAA+TGG | - | chr1.1:49277427-49277446 | None:intergenic | 35.0% | |
| GTTCCTATAAGACTTACCTT+TGG | + | chr1.1:49276724-49276743 | MS.gene073784:intron | 35.0% | |
| TAGTACAACTCAAGTGCAAT+TGG | + | chr1.1:49277463-49277482 | MS.gene073784:CDS | 35.0% | |
| TATTTGTTCCGTTCTTCTAG+AGG | - | chr1.1:49276932-49276951 | None:intergenic | 35.0% | |
| TCATCAGTTTCTTCTGCATA+AGG | - | chr1.1:49278409-49278428 | None:intergenic | 35.0% | |
| TCATTTGCAAGATAGTGATG+TGG | + | chr1.1:49277943-49277962 | MS.gene073784:CDS | 35.0% | |
| TCTAGAAGAACGGAACAAAT+AGG | + | chr1.1:49276931-49276950 | MS.gene073784:intron | 35.0% | |
| TGAAAGTTCAGTCAGATCAA+TGG | + | chr1.1:49278257-49278276 | MS.gene073784:CDS | 35.0% | |
| TGGTAATTTCATGGATGCAT+TGG | + | chr1.1:49276762-49276781 | MS.gene073784:intron | 35.0% | |
| TTCTAATCTGCAATGTGCTT+TGG | - | chr1.1:49277796-49277815 | None:intergenic | 35.0% | |
| TTGTAGAGAATCTGAATCAC+AGG | + | chr1.1:49277427-49277446 | MS.gene073784:CDS | 35.0% | |
| TTTATCCATGTCAAGAGAGT+TGG | + | chr1.1:49277082-49277101 | MS.gene073784:CDS | 35.0% | |
| TTTCAGTTAAAGCTGAAGCA+GGG | + | chr1.1:49277717-49277736 | MS.gene073784:CDS | 35.0% | |
| TTTGAAGGAGATTTCTTTCG+GGG | - | chr1.1:49276560-49276579 | None:intergenic | 35.0% | |
| ! | AGCTTTAACTGAAACAAGCT+CGG | - | chr1.1:49277711-49277730 | None:intergenic | 35.0% |
| ! | CAAGTTGCATTTTCAGTTTC+TGG | - | chr1.1:49277277-49277296 | None:intergenic | 35.0% |
| ! | TGAGTTGAAGGCAAGATTAT+TGG | + | chr1.1:49277967-49277986 | MS.gene073784:CDS | 35.0% |
| ! | TTATTTGCTGGGTTTGAAGA+CGG | - | chr1.1:49276638-49276657 | None:intergenic | 35.0% |
| ! | TTTGTCTACCTCTAGAAGAA+CGG | + | chr1.1:49276921-49276940 | MS.gene073784:intron | 35.0% |
| !! | CTAACTCTAAAGCTAAGGAT+TGG | - | chr1.1:49277550-49277569 | None:intergenic | 35.0% |
| !! | CTTTGTGTTGACTTGACATT+TGG | - | chr1.1:49276680-49276699 | None:intergenic | 35.0% |
| !! | TGAAGAAAATTGGAGTGTTG+TGG | + | chr1.1:49278461-49278480 | MS.gene073784:CDS | 35.0% |
| !! | TTTGGTGCCATTGTGATTAT+TGG | + | chr1.1:49276742-49276761 | MS.gene073784:intron | 35.0% |
| AAGCCGATGTTGAAGAGTTA+AGG | + | chr1.1:49277897-49277916 | MS.gene073784:CDS | 40.0% | |
| AAGGTCTCAAGTAAACTCAC+TGG | + | chr1.1:49277577-49277596 | MS.gene073784:CDS | 40.0% | |
| AAGTTCAGTCAGATCAATGG+AGG | + | chr1.1:49278260-49278279 | MS.gene073784:CDS | 40.0% | |
| AATGATAGCACGTGTAACTG+AGG | + | chr1.1:49278180-49278199 | MS.gene073784:CDS | 40.0% | |
| ACTAGGCTTCTATGCATCAA+TGG | + | chr1.1:49276239-49276258 | MS.gene073784:intron | 40.0% | |
| AGAATCTGAATCACAGGCAT+TGG | + | chr1.1:49277433-49277452 | MS.gene073784:CDS | 40.0% | |
| AGCCGATGTTGAAGAGTTAA+GGG | + | chr1.1:49277898-49277917 | MS.gene073784:CDS | 40.0% | |
| AGGCTGAAGATGCAAAGAAT+CGG | + | chr1.1:49277057-49277076 | MS.gene073784:CDS | 40.0% | |
| AGGGCAGTTAAAATCTGCAT+TGG | + | chr1.1:49277736-49277755 | MS.gene073784:CDS | 40.0% | |
| AGTCCAGAAACAGCATTCAA+TGG | + | chr1.1:49277217-49277236 | MS.gene073784:CDS | 40.0% | |
| ATGCTGAGATTCAAGACTTG+AGG | + | chr1.1:49277348-49277367 | MS.gene073784:CDS | 40.0% | |
| ATTCGACTGAAGACAGGAAA+AGG | - | chr1.1:49275850-49275869 | None:intergenic | 40.0% | |
| ATTGGAAGTTGTAGAAAGCG+AGG | + | chr1.1:49277667-49277686 | MS.gene073784:CDS | 40.0% | |
| CAGACACAAAAAGCAAGGTA+AGG | + | chr1.1:49275791-49275810 | MS.gene073784:intron | 40.0% | |
| CAGTTACACGTGCTATCATT+CGG | - | chr1.1:49278180-49278199 | None:intergenic | 40.0% | |
| CTCGTTCTGATATCTTACCT+CGG | - | chr1.1:49277768-49277787 | None:intergenic | 40.0% | |
| CTTTCTACAACTTCCAATGC+AGG | - | chr1.1:49277665-49277684 | None:intergenic | 40.0% | |
| GTTTCAGTTAAAGCTGAAGC+AGG | + | chr1.1:49277716-49277735 | MS.gene073784:CDS | 40.0% | |
| TAGAAAGCGAGGAGATAAAC+CGG | + | chr1.1:49277678-49277697 | MS.gene073784:CDS | 40.0% | |
| TGAGATTCAAGACTTGAGGA+TGG | + | chr1.1:49277352-49277371 | MS.gene073784:CDS | 40.0% | |
| TGAGGTATGAATGCTACCTT+TGG | + | chr1.1:49276098-49276117 | MS.gene073784:intron | 40.0% | |
| TGCCCTTAACTCTTCAACAT+CGG | - | chr1.1:49277903-49277922 | None:intergenic | 40.0% | |
| TGGAGTTAGAGGCTGAATTA+AGG | + | chr1.1:49278230-49278249 | MS.gene073784:CDS | 40.0% | |
| ! | ACATTTGGGCTCCTATCTTT+TGG | - | chr1.1:49276665-49276684 | None:intergenic | 40.0% |
| ! | ACGCTTTTGCACCTTCTAAT+CGG | - | chr1.1:49277517-49277536 | None:intergenic | 40.0% |
| ! | AGAGTTAAGGGCACAATTGA+TGG | + | chr1.1:49277910-49277929 | MS.gene073784:CDS | 40.0% |
| ! | GCACCAAAGGTAAGTCTTAT+AGG | - | chr1.1:49276730-49276749 | None:intergenic | 40.0% |
| !! | AGTCCATTGAATGCTGTTTC+TGG | - | chr1.1:49277223-49277242 | None:intergenic | 40.0% |
| ACGACTGGAGAACACGAAAT+CGG | + | chr1.1:49277826-49277845 | MS.gene073784:CDS | 45.0% | |
| ACTTGTGAGCAAACTTCAGG+AGG | + | chr1.1:49277604-49277623 | MS.gene073784:CDS | 45.0% | |
| AGAATGGCAGTCTGAACTAG+AGG | + | chr1.1:49277193-49277212 | MS.gene073784:CDS | 45.0% | |
| ATCCATGTCAAGAGAGTTGG+AGG | + | chr1.1:49277085-49277104 | MS.gene073784:CDS | 45.0% | |
| ATTGTCAATCCGGGTAGCTT+CGG | - | chr1.1:49277315-49277334 | None:intergenic | 45.0% | |
| CTGACTCAGCATTGTCAATC+CGG | - | chr1.1:49277325-49277344 | None:intergenic | 45.0% | |
| GAGCAAACTTCAGGAGGATT+TGG | + | chr1.1:49277610-49277629 | MS.gene073784:CDS | 45.0% | |
| GCTGCTGCTATGATTTCTTC+TGG | + | chr1.1:49278298-49278317 | MS.gene073784:CDS | 45.0% | |
| GGAACTTGTGAGCAAACTTC+AGG | + | chr1.1:49277601-49277620 | MS.gene073784:CDS | 45.0% | |
| GGAAGCTGCAAATAAGACAG+TGG | + | chr1.1:49277484-49277503 | MS.gene073784:CDS | 45.0% | |
| GGGTACAAGAATTGGAGTCT+CGG | + | chr1.1:49276952-49276971 | MS.gene073784:CDS | 45.0% | |
| GTCTCAAGTAAACTCACTGG+AGG | + | chr1.1:49277580-49277599 | MS.gene073784:CDS | 45.0% | |
| TGACTCAGCATTGTCAATCC+GGG | - | chr1.1:49277324-49277343 | None:intergenic | 45.0% | |
| TTCCTCCAACTCTCTTGACA+TGG | - | chr1.1:49277090-49277109 | None:intergenic | 45.0% | |
| ! | AGAACTGGTTCACTTGACAG+TGG | + | chr1.1:49278346-49278365 | MS.gene073784:CDS | 45.0% |
| ! | GAGGATTTGGTCAGTAGAGT+TGG | + | chr1.1:49277623-49277642 | MS.gene073784:CDS | 45.0% |
| ! | TAGTGATGTGGCTGAGTTGA+AGG | + | chr1.1:49277955-49277974 | MS.gene073784:CDS | 45.0% |
| !! | TAGAAGTGCCTTTGAACGAC+TGG | + | chr1.1:49277811-49277830 | MS.gene073784:CDS | 45.0% |
| ACTTCCAATGCAGGTAAGCG+AGG | - | chr1.1:49277656-49277675 | None:intergenic | 50.0% | |
| ATCTCCTCGCTTACCTGCAT+TGG | + | chr1.1:49277649-49277668 | MS.gene073784:CDS | 50.0% | |
| CAGACTGCCATTCTCGATCT+CGG | - | chr1.1:49277187-49277206 | None:intergenic | 50.0% | |
| CGTGTTCTCCAGTCGTTCAA+AGG | - | chr1.1:49277822-49277841 | None:intergenic | 50.0% | |
| GAGAGTTGGAGGAATCACAG+CGG | + | chr1.1:49277096-49277115 | MS.gene073784:CDS | 50.0% | |
| GTGAGCAGAAATGGTGCATC+AGG | + | chr1.1:49276530-49276549 | MS.gene073784:intron | 50.0% | |
| GTGGAAACGCTCCGATTAGA+AGG | + | chr1.1:49277503-49277522 | MS.gene073784:CDS | 50.0% | |
| TGAGGAGTTAGATGCTGCAC+AGG | + | chr1.1:49278198-49278217 | MS.gene073784:CDS | 50.0% | |
| ! | GGCGTCGAATTTGGAGTTAG+AGG | + | chr1.1:49278219-49278238 | MS.gene073784:CDS | 50.0% |
| ! | TGGTTGGCTGTGAGCAGAAA+TGG | + | chr1.1:49276521-49276540 | MS.gene073784:intron | 50.0% |
| !! | AAACAAGCTCGGCTTTGAGC+CGG | - | chr1.1:49277700-49277719 | None:intergenic | 50.0% |
| ATCTGCATTGGATGCTGCCG+AGG | + | chr1.1:49277748-49277767 | MS.gene073784:CDS | 55.0% | |
| CACGTGAATCCGAAGCTACC+CGG | + | chr1.1:49277303-49277322 | MS.gene073784:CDS | 55.0% | |
| CGAGCAGTCCGAGGATTTGA+AGG | - | chr1.1:49276575-49276594 | None:intergenic | 55.0% | |
| CTCAGGACCGAGATCGAGAA+TGG | + | chr1.1:49277177-49277196 | MS.gene073784:CDS | 55.0% | |
| GCTCGCAAGACGAAGTCATC+AGG | + | chr1.1:49276590-49276609 | MS.gene073784:CDS | 55.0% | |
| GGAATCACAGCGGCAACTTC+TGG | + | chr1.1:49277106-49277125 | MS.gene073784:CDS | 55.0% | |
| TGGGTTTGAAGACGGCGAAG+CGG | - | chr1.1:49276630-49276649 | None:intergenic | 55.0% | |
| TGTCAAAGCCTCTCGCTCTG+CGG | - | chr1.1:49278119-49278138 | None:intergenic | 55.0% | |
| !! | TGCTGCACAGGCGTCGAATT+TGG | + | chr1.1:49278210-49278229 | MS.gene073784:CDS | 55.0% |
| TGCTTCCGCTGAGGCAGCAA+GGG | + | chr1.1:49278093-49278112 | MS.gene073784:CDS | 60.0% | |
| TTCGTCTTGCGAGCAGTCCG+AGG | - | chr1.1:49276584-49276603 | None:intergenic | 60.0% | |
| TTGCTTCCGCTGAGGCAGCA+AGG | + | chr1.1:49278092-49278111 | MS.gene073784:CDS | 60.0% | |
| ! | TGAGGCTGTTGCTTCCGCTG+AGG | + | chr1.1:49278084-49278103 | MS.gene073784:CDS | 60.0% |
| AGCAAGGGCCGCAGAGCGAG+AGG | + | chr1.1:49278108-49278127 | MS.gene073784:CDS | 70.0% | |
| TGCGGCCCTTGCTGCCTCAG+CGG | - | chr1.1:49278101-49278120 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49275788 | 49278501 | 49275788 | ID=MS.gene073784 |
| chr1.1 | mRNA | 49275788 | 49278501 | 49275788 | ID=MS.gene073784.t1;Parent=MS.gene073784 |
| chr1.1 | exon | 49275788 | 49275807 | 49275788 | ID=MS.gene073784.t1.exon1;Parent=MS.gene073784.t1 |
| chr1.1 | CDS | 49275788 | 49275807 | 49275788 | ID=cds.MS.gene073784.t1;Parent=MS.gene073784.t1 |
| chr1.1 | exon | 49276538 | 49276712 | 49276538 | ID=MS.gene073784.t1.exon2;Parent=MS.gene073784.t1 |
| chr1.1 | CDS | 49276538 | 49276712 | 49276538 | ID=cds.MS.gene073784.t1;Parent=MS.gene073784.t1 |
| chr1.1 | exon | 49276936 | 49278501 | 49276936 | ID=MS.gene073784.t1.exon3;Parent=MS.gene073784.t1 |
| chr1.1 | CDS | 49276936 | 49278501 | 49276936 | ID=cds.MS.gene073784.t1;Parent=MS.gene073784.t1 |
| Gene Sequence |
| Protein sequence |
