AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08354

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08354.t1 MTR_0009s0050 48.837 344 174 2 13 355 6 348 3.44e-119 348
MS.gene08354.t1 MTR_0009s0050 48.837 344 174 2 13 355 6 348 5.28e-119 348
MS.gene08354.t1 MTR_0328s0030 49.387 326 163 2 31 355 22 346 3.39e-118 346
MS.gene08354.t1 MTR_5g055680 47.093 344 180 2 13 355 6 348 7.11e-118 345
MS.gene08354.t1 MTR_5g048570 47.674 344 176 3 13 355 6 346 4.18e-116 340
MS.gene08354.t1 MTR_5g048740 48.318 327 166 3 31 355 22 347 9.89e-116 340
MS.gene08354.t1 MTR_5g055900 47.478 337 175 2 20 355 13 348 1.40e-115 339
MS.gene08354.t1 MTR_5g055800 49.080 326 163 3 31 355 24 347 8.44e-115 337
MS.gene08354.t1 MTR_0009s0480 48.466 326 166 2 31 355 23 347 1.66e-114 337
MS.gene08354.t1 MTR_8g064200 45.217 345 186 3 13 355 11 354 8.06e-114 335
MS.gene08354.t1 MTR_8g064200 45.217 345 186 3 13 355 16 359 8.62e-114 335
MS.gene08354.t1 MTR_5g048470 45.562 338 182 2 20 355 18 355 6.32e-113 333
MS.gene08354.t1 MTR_2g072890 50.610 328 158 3 31 355 29 355 9.98e-113 332
MS.gene08354.t1 MTR_2g072910 50.000 328 160 3 31 355 28 354 2.38e-112 331
MS.gene08354.t1 MTR_5g055820 43.391 348 194 3 10 355 3 349 3.17e-109 323
MS.gene08354.t1 MTR_5g048850 44.380 347 191 2 10 355 3 348 4.16e-109 323
MS.gene08354.t1 MTR_5g048550 45.349 344 186 2 13 355 6 348 6.82e-108 320
MS.gene08354.t1 MTR_5g055690 44.828 348 189 3 10 355 3 349 9.66e-108 319
MS.gene08354.t1 MTR_1g033810 44.720 322 173 4 31 348 23 343 2.11e-95 288
MS.gene08354.t1 MTR_0009s0480 50.607 247 120 2 31 276 23 268 1.45e-88 268
MS.gene08354.t1 MTR_0009s0050 51.822 247 118 1 110 355 4 250 1.68e-87 264
MS.gene08354.t1 MTR_0009s0050 51.822 247 118 1 110 355 4 250 2.30e-87 264
MS.gene08354.t1 MTR_7g063730 38.576 337 206 1 20 355 29 365 1.28e-86 266
MS.gene08354.t1 MTR_7g062570 38.000 350 215 2 7 355 8 356 2.78e-83 257
MS.gene08354.t1 MTR_5g048850 44.444 270 148 2 10 278 3 271 6.16e-83 253
MS.gene08354.t1 MTR_2g072910 50.397 252 121 3 31 279 28 278 1.36e-82 253
MS.gene08354.t1 MTR_0056s0160 47.845 232 120 1 125 355 2 233 2.30e-82 250
MS.gene08354.t1 MTR_5g055690 44.981 269 145 3 10 276 3 270 2.48e-82 252
MS.gene08354.t1 MTR_2g437380 39.024 328 190 5 31 351 28 352 4.04e-80 249
MS.gene08354.t1 MTR_7g062600 37.278 338 210 2 20 355 16 353 1.50e-79 248
MS.gene08354.t1 MTR_7g062580 36.000 350 222 2 7 355 8 356 3.84e-78 244
MS.gene08354.t1 MTR_3g026150 38.776 343 203 5 7 345 12 351 4.05e-78 244
MS.gene08354.t1 MTR_7g068650 38.806 335 193 4 31 353 26 360 6.27e-77 241
MS.gene08354.t1 MTR_7g062550 37.685 337 209 1 20 355 25 361 6.68e-77 241
MS.gene08354.t1 MTR_4g015790 37.209 344 195 5 31 353 25 368 8.52e-73 231
MS.gene08354.t1 MTR_5g082750 35.542 332 207 3 30 354 24 355 1.57e-71 227
MS.gene08354.t1 MTR_3g117420 40.514 311 167 6 55 355 52 354 4.29e-71 226
MS.gene08354.t1 MTR_3g070860 35.843 332 204 4 31 354 26 356 3.29e-70 223
MS.gene08354.t1 MTR_7g062560 33.929 336 213 2 20 355 27 353 3.51e-70 223
MS.gene08354.t1 MTR_7g045650 41.026 273 158 3 20 290 25 296 1.31e-68 218
MS.gene08354.t1 MTR_8g074050 39.159 309 174 5 55 355 52 354 4.40e-67 215
MS.gene08354.t1 MTR_2g437380 40.323 248 146 2 106 351 11 258 1.06e-64 206
MS.gene08354.t1 MTR_0009s0050 54.762 168 76 0 188 355 1 168 8.21e-63 198
MS.gene08354.t1 MTR_8g074070 36.893 309 181 5 55 355 52 354 1.60e-61 201
MS.gene08354.t1 MTR_3g026150 40.408 245 145 1 102 345 4 248 6.12e-61 196
MS.gene08354.t1 MTR_3g092890 34.568 324 204 6 31 351 15 333 1.04e-60 198
MS.gene08354.t1 MTR_4g116010 36.538 312 188 5 48 355 43 348 7.96e-60 196
MS.gene08354.t1 MTR_5g059130 37.097 310 187 5 31 335 20 326 1.22e-59 196
MS.gene08354.t1 MTR_3g063180 33.333 333 209 6 31 353 21 350 1.90e-59 196
MS.gene08354.t1 MTR_2g069300 34.195 348 203 6 23 355 22 358 1.17e-58 194
MS.gene08354.t1 MTR_3g026150 38.321 274 162 5 7 276 12 282 8.92e-58 189
MS.gene08354.t1 MTR_8g074070 36.513 304 170 5 55 355 52 335 8.03e-56 186
MS.gene08354.t1 MTR_8g009110 32.967 364 204 11 11 355 23 365 1.46e-55 186
MS.gene08354.t1 MTR_5g059140 35.314 303 184 7 31 325 18 316 1.93e-55 184
MS.gene08354.t1 MTR_2g069190 33.148 359 211 8 11 355 28 371 7.14e-55 184
MS.gene08354.t1 MTR_2g069210 32.869 359 212 8 11 355 24 367 3.02e-54 182
MS.gene08354.t1 MTR_7g102820 33.333 351 200 8 31 355 38 380 3.43e-54 182
MS.gene08354.t1 MTR_1g062110 34.561 353 211 10 18 355 26 373 4.46e-54 182
MS.gene08354.t1 MTR_4g087120 36.207 290 149 6 76 342 54 330 6.02e-54 181
MS.gene08354.t1 MTR_2g069090 32.591 359 214 6 11 355 28 372 1.26e-53 181
MS.gene08354.t1 MTR_0032s0040 33.889 360 207 12 10 350 21 368 2.62e-53 180
MS.gene08354.t1 MTR_0009s0400 53.472 144 67 0 212 355 1 144 2.74e-53 173
MS.gene08354.t1 MTR_8g009160 31.405 363 210 10 11 355 23 364 3.66e-53 179
MS.gene08354.t1 MTR_8g009170 33.426 359 210 11 11 355 23 366 3.76e-53 179
MS.gene08354.t1 MTR_5g065010 34.557 327 186 9 43 355 30 342 5.07e-53 178
MS.gene08354.t1 MTR_3g117485 37.313 268 157 3 70 330 68 331 8.29e-53 178
MS.gene08354.t1 MTR_3g072820 35.256 312 192 7 31 336 18 325 1.14e-52 177
MS.gene08354.t1 MTR_8g028435 31.680 363 209 10 11 355 23 364 2.34e-52 177
MS.gene08354.t1 MTR_8g009090 31.653 357 217 9 11 355 23 364 2.63e-52 177
MS.gene08354.t1 MTR_1g034140 32.399 321 193 9 52 355 24 337 2.89e-52 176
MS.gene08354.t1 MTR_8g024120 31.707 328 219 5 31 355 18 343 3.20e-52 176
MS.gene08354.t1 MTR_3g072810 35.357 280 175 4 68 342 50 328 3.64e-52 176
MS.gene08354.t1 MTR_3g088565 34.354 294 174 5 54 340 2 283 4.45e-52 175
MS.gene08354.t1 MTR_8g009080 30.518 367 226 8 3 355 46 397 1.05e-51 177
MS.gene08354.t1 MTR_4g087110 34.915 295 169 8 76 355 54 340 2.62e-51 174
MS.gene08354.t1 MTR_1g093110 29.204 339 219 8 31 355 43 374 3.49e-51 174
MS.gene08354.t1 MTR_4g087140 32.317 328 192 10 53 355 24 346 4.71e-51 174
MS.gene08354.t1 MTR_1g034120 30.233 344 206 10 38 355 12 347 4.82e-51 174
MS.gene08354.t1 MTR_1g093120 31.148 366 228 10 3 355 16 370 5.92e-51 174
MS.gene08354.t1 MTR_5g011250 35.463 313 184 8 31 327 19 329 6.71e-51 173
MS.gene08354.t1 MTR_1g093140 29.076 368 238 8 4 355 18 378 9.94e-51 173
MS.gene08354.t1 MTR_1g034060 30.233 344 206 10 38 355 12 347 1.04e-50 172
MS.gene08354.t1 MTR_8g041620 32.877 365 207 12 11 355 28 374 1.89e-49 170
MS.gene08354.t1 MTR_2g102570 33.230 322 194 10 31 339 28 341 2.26e-49 170
MS.gene08354.t1 MTR_4g093840 32.927 328 204 8 38 355 45 366 3.09e-49 169
MS.gene08354.t1 MTR_7g105070 29.775 356 227 9 11 355 19 362 3.21e-49 169
MS.gene08354.t1 MTR_2g069010 31.781 365 213 9 4 348 21 369 4.34e-49 169
MS.gene08354.t1 MTR_2g068960 32.861 353 205 9 4 338 15 353 5.82e-49 169
MS.gene08354.t1 MTR_3g117485 35.659 258 155 3 80 330 6 259 6.69e-49 166
MS.gene08354.t1 MTR_7g102720 35.669 314 178 11 53 355 35 335 9.77e-49 167
MS.gene08354.t1 MTR_6g015950 33.648 318 198 7 31 342 16 326 1.47e-48 167
MS.gene08354.t1 MTR_1g048940 30.484 351 218 12 19 355 12 350 1.65e-48 167
MS.gene08354.t1 MTR_4g024660 30.978 368 225 12 3 355 20 373 1.68e-48 167
MS.gene08354.t1 MTR_8g008930 31.285 358 218 9 11 355 23 365 2.55e-48 167
MS.gene08354.t1 MTR_5g032870 32.609 322 200 7 32 342 17 332 3.59e-48 166
MS.gene08354.t1 MTR_8g041600 31.476 359 220 10 11 355 28 374 5.68e-48 166
MS.gene08354.t1 MTR_4g087090 29.503 322 203 8 53 355 28 344 1.61e-47 164
MS.gene08354.t1 MTR_2g068950 31.429 350 214 8 4 338 15 353 2.51e-47 164
MS.gene08354.t1 MTR_1g070085 31.803 305 186 9 53 345 35 329 9.02e-47 162
MS.gene08354.t1 MTR_1g070085 31.803 305 186 9 53 345 35 329 9.02e-47 162
MS.gene08354.t1 MTR_2g069020 31.476 359 211 10 4 344 19 360 1.51e-46 162
MS.gene08354.t1 MTR_1g070135 31.741 293 193 6 54 342 37 326 2.44e-46 161
MS.gene08354.t1 MTR_2g069020 31.476 359 211 10 4 344 19 360 2.76e-46 162
MS.gene08354.t1 MTR_7g056347 28.689 366 234 8 4 355 21 373 4.33e-46 161
MS.gene08354.t1 MTR_2g025120 30.164 305 194 6 52 347 1 295 4.71e-46 159
MS.gene08354.t1 MTR_3g096500 30.938 320 205 5 13 320 27 342 6.47e-46 161
MS.gene08354.t1 MTR_8g062600 30.137 365 216 12 11 355 28 373 6.74e-46 160
MS.gene08354.t1 MTR_8g033380 33.654 312 184 7 31 327 33 336 6.87e-46 160
MS.gene08354.t1 MTR_3g043900 35.505 307 187 9 53 355 54 353 1.01e-45 160
MS.gene08354.t1 MTR_3g045230 34.076 314 183 10 53 355 54 354 1.95e-45 159
MS.gene08354.t1 MTR_2g069060 32.508 323 192 10 46 355 40 349 3.29e-45 158
MS.gene08354.t1 MTR_4g087100 32.508 323 185 10 56 355 33 345 3.41e-45 158
MS.gene08354.t1 MTR_4g117880 32.558 344 198 13 11 338 23 348 6.00e-45 158
MS.gene08354.t1 MTR_3g091350 32.268 313 190 9 54 354 58 360 6.38e-45 158
MS.gene08354.t1 MTR_7g029655 30.495 364 218 10 11 355 23 370 6.93e-45 158
MS.gene08354.t1 MTR_7g081710 27.933 358 242 8 5 355 3 351 7.13e-45 157
MS.gene08354.t1 MTR_1g032140 31.395 344 220 8 11 348 25 358 7.39e-45 158
MS.gene08354.t1 MTR_1g070080 32.831 332 201 10 27 350 15 332 1.73e-44 156
MS.gene08354.t1 MTR_1g043810 29.462 353 231 7 11 355 15 357 2.22e-44 156
MS.gene08354.t1 MTR_3g088745 34.146 328 189 10 31 339 16 335 2.79e-44 156
MS.gene08354.t1 MTR_8g469400 31.768 362 201 14 11 355 28 360 8.38e-44 155
MS.gene08354.t1 MTR_8g075890 31.776 321 205 8 28 337 13 330 8.61e-44 155
MS.gene08354.t1 MTR_1g102070 30.267 337 215 7 19 339 26 358 9.97e-44 155
MS.gene08354.t1 MTR_1g043770 31.638 354 220 9 11 355 15 355 2.03e-43 154
MS.gene08354.t1 MTR_3g083370 28.239 301 203 6 52 347 1 293 2.65e-43 152
MS.gene08354.t1 MTR_1g043760 30.769 351 214 10 11 348 15 349 2.67e-43 153
MS.gene08354.t1 MTR_5g085330 30.742 283 184 4 71 347 22 298 3.19e-43 152
MS.gene08354.t1 MTR_5g022020 32.063 315 196 9 35 336 20 329 3.74e-43 153
MS.gene08354.t1 MTR_1g070120 30.375 293 197 6 54 342 37 326 3.97e-43 152
MS.gene08354.t1 MTR_4g115990 33.446 296 172 5 39 330 30 304 6.99e-43 151
MS.gene08354.t1 MTR_3g091360 31.385 325 204 9 41 354 37 353 7.47e-43 152
MS.gene08354.t1 MTR_2g083000 31.488 289 178 6 53 335 31 305 8.27e-43 151
MS.gene08354.t1 MTR_3g058610 30.887 327 211 9 35 354 20 338 8.99e-43 152
MS.gene08354.t1 MTR_4g087130 36.299 281 160 6 76 342 54 329 1.04e-42 152
MS.gene08354.t1 MTR_7g016090 30.841 321 202 9 31 342 18 327 1.10e-42 151
MS.gene08354.t1 MTR_7g016090 30.841 321 202 9 31 342 16 325 1.35e-42 151
MS.gene08354.t1 MTR_2g068840 30.556 360 224 12 9 355 15 361 1.40e-42 152
MS.gene08354.t1 MTR_7g451860 32.082 293 174 7 55 337 41 318 2.28e-42 150
MS.gene08354.t1 MTR_7g047670 32.082 293 174 7 55 337 41 318 2.28e-42 150
MS.gene08354.t1 MTR_1g043775 30.508 354 226 8 11 355 15 357 2.32e-42 151
MS.gene08354.t1 MTR_6g464620 30.564 337 214 8 19 339 31 363 3.49e-42 151
MS.gene08354.t1 MTR_8g009150 29.781 366 193 12 11 355 23 345 6.05e-42 149
MS.gene08354.t1 MTR_5g032880 29.664 327 213 7 32 351 17 333 6.90e-42 155
MS.gene08354.t1 MTR_5g032880 31.373 306 197 5 47 342 368 670 1.55e-41 154
MS.gene08354.t1 MTR_1g081840 31.392 309 195 6 26 322 28 331 7.17e-42 150
MS.gene08354.t1 MTR_8g075830 32.234 273 177 4 72 337 59 330 8.80e-42 149
MS.gene08354.t1 MTR_4g119410 30.032 313 203 6 54 355 66 373 1.04e-41 149
MS.gene08354.t1 MTR_6g092620 34.164 281 163 7 54 323 2 271 3.10e-41 146
MS.gene08354.t1 MTR_8g063070 27.762 353 232 8 11 351 28 369 3.65e-41 148
MS.gene08354.t1 MTR_1g032250 30.702 342 223 8 11 347 32 364 4.18e-41 148
MS.gene08354.t1 MTR_7g056393 29.041 365 234 10 4 355 21 373 4.49e-41 148
MS.gene08354.t1 MTR_8g006930 29.570 372 223 13 4 355 21 373 1.38e-40 147
MS.gene08354.t1 MTR_2g083030 32.082 293 176 7 53 337 35 312 3.14e-40 145
MS.gene08354.t1 MTR_7g078010 30.623 369 223 11 4 355 21 373 8.65e-40 144
MS.gene08354.t1 MTR_7g016080 29.394 330 207 9 31 351 16 328 3.06e-39 142
MS.gene08354.t1 MTR_1g032220 29.738 343 227 8 11 348 32 365 3.99e-39 142
MS.gene08354.t1 MTR_5g005570 32.082 293 171 8 55 337 37 311 7.16e-39 141
MS.gene08354.t1 MTR_1g070185 27.701 361 239 8 3 355 21 367 1.50e-38 141
MS.gene08354.t1 MTR_8g009120 29.973 367 199 13 11 355 23 353 2.83e-38 140
MS.gene08354.t1 MTR_1g062110 34.228 298 175 11 18 299 26 318 3.67e-38 139
MS.gene08354.t1 MTR_1g070085 32.589 224 140 5 127 345 34 251 8.74e-38 136
MS.gene08354.t1 MTR_1g070100 33.333 222 137 5 127 343 30 245 1.47e-37 135
MS.gene08354.t1 MTR_2g019370 29.904 311 193 8 49 344 22 322 2.17e-37 137
MS.gene08354.t1 MTR_1g011580 29.967 307 201 8 47 350 55 350 4.09e-36 134
MS.gene08354.t1 MTR_3g464530 31.365 271 164 7 41 303 23 279 1.42e-35 132
MS.gene08354.t1 MTR_8g093930 26.377 345 236 6 6 338 1 339 1.07e-34 130
MS.gene08354.t1 MTR_0009s0410 44.203 138 75 2 31 167 23 159 1.22e-34 125
MS.gene08354.t1 MTR_4g074130 28.671 286 188 8 55 335 40 314 1.47e-34 130
MS.gene08354.t1 MTR_2g072930 49.593 123 59 2 44 163 40 162 2.66e-33 122
MS.gene08354.t1 MTR_7g056353 33.096 281 160 9 89 354 79 346 3.53e-33 129
MS.gene08354.t1 MTR_8g009170 32.526 289 168 10 11 287 23 296 1.38e-32 123
MS.gene08354.t1 MTR_1g086550 28.395 324 198 12 55 355 20 332 2.75e-32 124
MS.gene08354.t1 MTR_4g123020 29.268 328 203 13 42 354 6 319 3.11e-32 123
MS.gene08354.t1 MTR_2g025120 30.472 233 144 5 52 276 1 223 7.07e-32 119
MS.gene08354.t1 MTR_8g009180 32.051 234 141 4 138 355 63 294 9.32e-32 121
MS.gene08354.t1 MTR_8g461330 29.392 296 186 8 77 354 44 334 1.31e-31 122
MS.gene08354.t1 MTR_8g009080 29.693 293 178 9 3 283 46 322 4.46e-31 120
MS.gene08354.t1 MTR_2g033270 30.526 285 172 10 74 344 35 307 6.20e-31 119
MS.gene08354.t1 MTR_8g041600 31.522 276 167 9 11 276 28 291 9.47e-31 119
MS.gene08354.t1 MTR_8g009080 29.537 281 172 7 3 272 46 311 4.92e-30 117
MS.gene08354.t1 MTR_1g070135 31.718 227 148 6 54 276 37 260 5.74e-30 116
MS.gene08354.t1 MTR_8g093980 28.829 333 213 9 21 337 28 352 1.61e-29 117
MS.gene08354.t1 MTR_2g070870 28.621 290 191 7 74 353 42 325 7.23e-29 114
MS.gene08354.t1 MTR_1g043810 29.259 270 176 6 11 275 15 274 1.26e-28 114
MS.gene08354.t1 MTR_2g068800 30.068 296 168 12 9 294 15 281 4.83e-28 111
MS.gene08354.t1 MTR_3g083370 26.522 230 157 5 52 276 1 223 4.98e-28 109
MS.gene08354.t1 MTR_4g096840 26.855 283 192 7 74 344 43 322 1.28e-27 111
MS.gene08354.t1 MTR_1g043775 31.136 273 167 9 11 275 15 274 1.53e-27 110
MS.gene08354.t1 MTR_2g069060 32.510 243 140 8 46 276 18 248 1.92e-27 108
MS.gene08354.t1 MTR_3g464530 29.918 244 149 7 41 276 23 252 2.28e-27 108
MS.gene08354.t1 MTR_4g132770 34.752 141 90 1 205 343 22 162 7.28e-27 104
MS.gene08354.t1 MTR_4g100600 29.766 299 186 11 54 335 8 299 1.04e-26 108
MS.gene08354.t1 MTR_7g090520 30.032 313 201 7 53 355 8 312 3.00e-26 107
MS.gene08354.t1 MTR_1g043770 31.365 271 167 8 11 275 15 272 7.51e-26 105
MS.gene08354.t1 MTR_3g040410 28.938 273 178 9 71 337 27 289 1.80e-25 104
MS.gene08354.t1 MTR_7g078010 29.577 284 173 9 4 276 21 288 2.32e-25 104
MS.gene08354.t1 MTR_1g070110 29.339 242 134 5 101 341 15 220 5.29e-25 101
MS.gene08354.t1 MTR_1g027290 26.625 323 206 11 53 355 27 338 6.05e-24 101
MS.gene08354.t1 MTR_6g088665 29.452 292 179 9 68 335 32 320 1.03e-23 100
MS.gene08354.t1 MTR_8g102600 29.180 305 166 14 71 342 26 313 1.16e-23 100
MS.gene08354.t1 MTR_6g088665 28.669 293 181 8 68 335 32 321 1.54e-23 100
MS.gene08354.t1 MTR_4g100590 30.605 281 158 12 77 335 29 294 1.34e-22 97.1
MS.gene08354.t1 MTR_5g025090 23.203 306 221 6 53 355 3 297 1.80e-22 96.3
MS.gene08354.t1 MTR_8g030880 26.667 315 206 10 51 353 6 307 3.71e-22 95.9
MS.gene08354.t1 MTR_4g011720 28.094 299 200 7 53 342 7 299 1.36e-20 91.3
MS.gene08354.t1 MTR_1g027310 26.045 311 181 9 53 355 47 316 6.77e-20 89.4
MS.gene08354.t1 MTR_1g043840 30.052 193 121 4 156 335 32 223 2.18e-19 88.2
MS.gene08354.t1 MTR_7g077670 27.508 309 195 11 45 338 1 295 1.07e-18 85.9
MS.gene08354.t1 MTR_3g108520 28.674 279 181 9 73 341 33 303 1.12e-18 85.9
MS.gene08354.t1 MTR_5g027230 24.055 291 197 8 53 335 4 278 2.54e-18 84.7
MS.gene08354.t1 MTR_4g011690 26.885 305 203 9 49 341 3 299 1.78e-17 82.4
MS.gene08354.t1 MTR_4g021360 25.166 302 202 10 55 340 7 300 2.06e-17 82.4
MS.gene08354.t1 MTR_6g035160 33.333 165 104 5 180 341 4 165 5.53e-16 75.5
MS.gene08354.t1 MTR_5g024940 25.000 296 185 8 53 343 4 267 7.27e-16 77.4
MS.gene08354.t1 MTR_4g100590 30.556 252 138 12 106 335 11 247 2.27e-15 75.5
MS.gene08354.t1 MTR_8g102600 28.519 270 143 14 106 342 11 263 6.76e-15 74.3
MS.gene08354.t1 MTR_4g021380 26.154 325 195 12 55 353 7 312 3.15e-14 73.2
MS.gene08354.t1 MTR_4g100600 27.830 212 135 9 54 253 8 213 7.19e-13 67.8
MS.gene08354.t1 MTR_7g056370 30.579 121 78 2 77 195 71 187 1.91e-11 63.5
MS.gene08354.t1 MTR_1g032240 39.785 93 45 3 214 305 63 145 2.32e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08354.t1 AT1G78550 50.000 340 167 2 19 355 17 356 6.65e-114 335
MS.gene08354.t1 AT1G17020 47.674 344 173 4 18 355 16 358 1.84e-112 332
MS.gene08354.t1 AT4G25310 54.514 288 126 3 70 355 69 353 5.14e-106 315
MS.gene08354.t1 AT4G25300 46.667 330 170 4 31 355 28 356 6.41e-104 310
MS.gene08354.t1 AT1G17010 45.773 343 181 4 18 355 16 358 2.52e-103 308
MS.gene08354.t1 AT1G78550 52.920 274 128 1 83 355 5 278 5.52e-99 294
MS.gene08354.t1 AT4G25310 49.826 287 113 4 70 355 69 325 3.21e-86 263
MS.gene08354.t1 AT3G21420 40.751 346 195 6 20 355 17 362 3.45e-84 259
MS.gene08354.t1 AT3G11180 39.535 301 179 2 54 351 94 394 1.38e-75 239
MS.gene08354.t1 AT5G05600 35.976 328 203 3 31 351 38 365 3.47e-73 231
MS.gene08354.t1 AT3G11180 40.702 285 166 2 54 335 94 378 4.05e-73 233
MS.gene08354.t1 AT2G38240 35.366 328 206 4 31 353 23 349 3.19e-72 228
MS.gene08354.t1 AT3G55970 36.499 337 202 7 30 354 24 360 5.93e-70 223
MS.gene08354.t1 AT5G20400 35.652 345 210 7 19 355 8 348 1.43e-66 214
MS.gene08354.t1 AT1G49390 36.336 333 203 6 30 355 18 348 1.51e-66 214
MS.gene08354.t1 AT5G54000 38.065 310 185 4 51 355 42 349 4.39e-66 213
MS.gene08354.t1 AT5G20550 36.471 340 191 9 19 341 8 339 2.55e-62 203
MS.gene08354.t1 AT5G54000 38.376 271 163 3 87 355 1 269 2.31e-59 192
MS.gene08354.t1 AT1G49390 36.900 271 167 3 87 355 1 269 3.40e-59 192
MS.gene08354.t1 AT4G16330 35.294 306 183 6 54 353 66 362 4.77e-59 195
MS.gene08354.t1 AT4G25300 50.000 190 94 1 167 355 73 262 8.74e-59 191
MS.gene08354.t1 AT1G06640 32.533 375 213 12 3 355 13 369 2.54e-55 185
MS.gene08354.t1 AT3G19000 35.112 356 195 12 17 351 1 341 3.57e-55 184
MS.gene08354.t1 AT5G59540 32.597 362 212 11 11 355 20 366 5.95e-54 182
MS.gene08354.t1 AT3G13610 33.065 372 217 13 1 355 5 361 6.22e-54 181
MS.gene08354.t1 AT3G19010 33.542 319 190 7 50 351 23 336 8.87e-54 181
MS.gene08354.t1 AT3G19010 33.542 319 190 7 50 351 23 336 8.87e-54 181
MS.gene08354.t1 AT1G06650 31.452 372 221 13 3 355 13 369 1.21e-53 181
MS.gene08354.t1 AT5G24530 32.722 327 209 7 31 351 15 336 1.55e-53 180
MS.gene08354.t1 AT5G08640 35.463 313 192 6 30 336 18 326 3.23e-53 179
MS.gene08354.t1 AT5G08640 35.463 313 192 6 30 336 18 326 3.23e-53 179
MS.gene08354.t1 AT1G06620 31.593 364 210 8 11 355 22 365 2.01e-52 177
MS.gene08354.t1 AT1G55290 35.417 336 195 13 31 355 37 361 2.51e-52 177
MS.gene08354.t1 AT5G59530 33.058 363 198 12 16 355 24 364 7.88e-52 176
MS.gene08354.t1 AT1G04380 32.268 313 190 5 54 355 44 345 2.29e-51 174
MS.gene08354.t1 AT1G77330 36.462 277 148 7 54 315 2 265 4.12e-51 172
MS.gene08354.t1 AT1G04350 31.215 362 214 9 11 355 17 360 1.11e-50 173
MS.gene08354.t1 AT2G36690 32.647 340 206 9 31 355 32 363 2.53e-50 172
MS.gene08354.t1 AT2G36690 32.647 340 206 9 31 355 32 363 2.53e-50 172
MS.gene08354.t1 AT4G22880 33.962 318 187 9 29 327 16 329 5.26e-50 171
MS.gene08354.t1 AT4G22880 33.962 318 187 9 29 327 16 329 5.26e-50 171
MS.gene08354.t1 AT4G22880 33.962 318 187 9 29 327 16 329 5.26e-50 171
MS.gene08354.t1 AT5G43440 33.119 311 193 7 54 355 61 365 1.27e-49 170
MS.gene08354.t1 AT4G10500 30.816 331 221 7 29 354 18 345 1.51e-49 170
MS.gene08354.t1 AT1G06645 29.235 366 234 9 3 355 26 379 2.16e-48 167
MS.gene08354.t1 AT1G03410 32.055 365 226 10 3 355 7 361 5.48e-48 166
MS.gene08354.t1 AT4G10490 29.483 329 225 6 31 354 18 344 5.75e-48 166
MS.gene08354.t1 AT3G55970 36.680 259 152 7 30 276 24 282 1.08e-47 163
MS.gene08354.t1 AT1G03410 32.055 365 226 10 3 355 44 398 1.12e-47 166
MS.gene08354.t1 AT5G43450 30.726 358 211 11 16 355 24 362 1.53e-47 165
MS.gene08354.t1 AT4G16330 36.078 255 152 5 105 353 7 256 2.00e-47 161
MS.gene08354.t1 AT1G03400 31.921 354 214 9 3 346 7 343 3.11e-47 164
MS.gene08354.t1 AT2G30830 31.680 363 200 12 16 355 21 358 5.09e-47 163
MS.gene08354.t1 AT5G05600 33.202 253 162 3 31 276 38 290 5.68e-47 161
MS.gene08354.t1 AT3G61400 31.635 373 219 14 4 355 13 370 1.75e-46 162
MS.gene08354.t1 AT3G19010 31.975 319 165 8 50 351 23 306 1.42e-45 158
MS.gene08354.t1 AT4G25420 32.432 333 205 10 28 345 37 364 3.18e-45 159
MS.gene08354.t1 AT5G07200 30.564 337 211 8 22 339 28 360 3.78e-45 159
MS.gene08354.t1 AT1G12010 28.716 296 199 5 56 347 8 295 8.57e-45 156
MS.gene08354.t1 AT2G30840 29.679 374 223 12 3 355 8 362 9.40e-45 157
MS.gene08354.t1 AT1G05010 31.169 308 191 7 52 347 1 299 1.21e-44 156
MS.gene08354.t1 AT3G60290 29.787 329 207 9 37 354 38 353 5.51e-44 155
MS.gene08354.t1 AT1G15550 33.088 272 171 7 72 335 69 337 1.10e-43 154
MS.gene08354.t1 AT4G21200 32.997 297 184 6 55 344 42 330 2.29e-43 153
MS.gene08354.t1 AT2G19590 35.531 273 157 7 55 319 11 272 2.72e-43 152
MS.gene08354.t1 AT1G62380 29.514 288 191 5 56 339 8 287 1.12e-42 151
MS.gene08354.t1 AT2G44800 28.704 324 219 7 30 344 23 343 1.72e-42 151
MS.gene08354.t1 AT1G60980 30.028 353 217 9 9 345 23 361 5.90e-42 150
MS.gene08354.t1 AT1G03400 29.581 382 214 10 3 346 7 371 2.15e-41 149
MS.gene08354.t1 AT2G30840 29.412 374 218 13 3 355 8 356 3.05e-41 148
MS.gene08354.t1 AT3G51240 32.000 275 182 4 73 344 59 331 3.36e-41 148
MS.gene08354.t1 AT3G12900 30.699 329 217 7 31 354 33 355 2.06e-40 146
MS.gene08354.t1 AT5G63590 33.904 292 174 9 55 335 14 297 6.52e-40 143
MS.gene08354.t1 AT5G51810 31.790 324 198 10 31 339 42 357 1.11e-39 144
MS.gene08354.t1 AT1G80340 32.210 267 170 7 77 335 67 330 2.02e-39 143
MS.gene08354.t1 AT1G78440 31.148 305 186 9 55 345 18 312 4.57e-39 141
MS.gene08354.t1 AT5G07480 30.312 320 195 11 55 355 44 354 5.39e-39 142
MS.gene08354.t1 AT1G50960 31.818 264 168 4 55 312 40 297 4.21e-38 139
MS.gene08354.t1 AT1G80330 29.841 315 193 8 35 335 33 333 6.01e-38 139
MS.gene08354.t1 AT4G21690 31.636 275 172 6 74 335 61 332 1.15e-37 138
MS.gene08354.t1 AT3G19000 32.384 281 157 11 17 276 1 269 1.82e-37 136
MS.gene08354.t1 AT2G19590 35.000 240 144 5 84 319 26 257 3.29e-37 135
MS.gene08354.t1 AT5G63600 29.329 283 192 5 55 335 33 309 9.29e-37 135
MS.gene08354.t1 AT5G63600 29.577 284 191 6 55 335 33 310 2.69e-36 134
MS.gene08354.t1 AT3G49620 34.848 264 140 7 73 314 63 316 5.56e-36 134
MS.gene08354.t1 AT2G25450 27.838 370 232 12 3 355 8 359 1.57e-35 133
MS.gene08354.t1 AT3G19010 31.837 245 148 6 50 277 23 265 3.47e-35 130
MS.gene08354.t1 AT1G06640 31.959 291 162 10 3 275 13 285 5.39e-35 130
MS.gene08354.t1 AT1G44090 32.573 307 183 9 31 322 43 340 6.09e-35 132
MS.gene08354.t1 AT1G06640 31.849 292 163 10 3 276 13 286 6.41e-35 129
MS.gene08354.t1 AT2G34555 28.966 290 188 8 55 335 27 307 5.74e-34 128
MS.gene08354.t1 AT1G47990 28.155 309 192 12 53 344 13 308 1.76e-33 126
MS.gene08354.t1 AT1G02400 29.487 312 195 12 49 345 18 319 1.79e-33 127
MS.gene08354.t1 AT1G06650 29.592 294 177 11 3 281 13 291 4.76e-33 125
MS.gene08354.t1 AT4G25420 32.184 261 160 9 28 276 37 292 5.40e-33 124
MS.gene08354.t1 AT1G30040 26.733 303 201 9 53 344 29 321 2.82e-32 124
MS.gene08354.t1 AT3G50210 31.313 297 164 9 52 314 5 295 6.98e-32 122
MS.gene08354.t1 AT3G50210 31.313 297 164 9 52 314 5 295 6.98e-32 122
MS.gene08354.t1 AT3G50210 31.313 297 164 9 52 314 5 295 6.98e-32 122
MS.gene08354.t1 AT3G49630 30.769 299 164 9 49 314 3 291 8.93e-32 122
MS.gene08354.t1 AT3G51240 33.023 215 140 3 105 316 7 220 1.72e-31 120
MS.gene08354.t1 AT3G49630 31.579 266 150 7 71 314 32 287 2.61e-31 121
MS.gene08354.t1 AT1G06620 30.526 285 154 8 11 275 22 282 3.02e-31 119
MS.gene08354.t1 AT1G04380 31.330 233 141 4 54 278 44 265 1.76e-30 117
MS.gene08354.t1 AT5G43440 33.333 231 142 6 54 278 61 285 2.22e-30 117
MS.gene08354.t1 AT5G12270 29.932 294 189 8 73 355 72 359 6.03e-30 118
MS.gene08354.t1 AT5G51810 31.923 260 158 9 31 279 42 293 2.83e-29 114
MS.gene08354.t1 AT5G59540 30.357 280 166 10 11 276 20 284 2.99e-29 114
MS.gene08354.t1 AT3G61400 30.345 290 171 11 4 276 13 288 1.55e-28 112
MS.gene08354.t1 AT5G07480 30.332 211 137 4 153 355 37 245 2.05e-28 111
MS.gene08354.t1 AT5G63595 29.151 271 164 7 43 309 13 259 2.12e-28 112
MS.gene08354.t1 AT5G43450 29.670 273 158 10 18 275 26 279 2.47e-28 112
MS.gene08354.t1 AT5G43935 28.667 300 179 9 42 335 12 282 1.47e-27 110
MS.gene08354.t1 AT2G30840 27.835 291 173 10 3 275 8 279 3.00e-26 107
MS.gene08354.t1 AT4G23340 33.103 290 158 11 77 347 30 302 3.30e-26 107
MS.gene08354.t1 AT3G46500 28.710 310 196 11 48 335 2 308 3.13e-25 104
MS.gene08354.t1 AT3G47190 29.242 277 145 9 55 303 32 285 5.57e-25 103
MS.gene08354.t1 AT5G63580 28.571 224 152 6 53 272 17 236 8.31e-23 95.9
MS.gene08354.t1 AT5G63580 28.571 224 152 6 53 272 17 236 1.02e-22 95.9
MS.gene08354.t1 AT3G46500 29.856 278 170 11 48 303 2 276 3.25e-22 95.5
MS.gene08354.t1 AT1G52820 29.139 302 194 10 51 341 9 301 1.03e-21 94.7
MS.gene08354.t1 AT1G30040 27.660 235 149 9 53 276 29 253 4.51e-21 91.7
MS.gene08354.t1 AT3G50210 33.939 165 103 3 156 314 49 213 4.59e-20 88.6
MS.gene08354.t1 AT1G14130 25.753 299 200 9 55 345 9 293 5.02e-20 89.7
MS.gene08354.t1 AT3G49630 33.544 158 102 3 159 314 62 218 8.01e-20 88.2
MS.gene08354.t1 AT3G46490 27.673 318 200 8 45 335 1 315 9.74e-20 89.4
MS.gene08354.t1 AT1G02400 27.344 256 166 10 49 292 18 265 1.50e-19 87.4
MS.gene08354.t1 AT3G46490 28.621 290 177 8 45 307 1 287 5.78e-19 86.7
MS.gene08354.t1 AT5G58660 26.159 302 167 10 45 303 14 302 1.97e-18 85.9
MS.gene08354.t1 AT4G16765 32.178 202 122 7 151 340 42 240 3.41e-18 83.2
MS.gene08354.t1 AT4G16765 32.178 202 122 7 151 340 42 240 3.41e-18 83.2
MS.gene08354.t1 AT4G16765 32.178 202 122 7 151 340 42 240 3.41e-18 83.2
MS.gene08354.t1 AT1G14120 26.332 319 193 9 55 355 8 302 5.77e-18 84.0
MS.gene08354.t1 AT1G14120 26.332 319 193 9 55 355 8 302 5.77e-18 84.0
MS.gene08354.t1 AT1G14120 26.332 319 193 9 55 355 8 302 5.77e-18 84.0
MS.gene08354.t1 AT4G23340 35.838 173 98 5 180 347 20 184 1.03e-17 81.3
MS.gene08354.t1 AT1G35190 30.651 261 128 12 68 303 23 255 4.28e-17 81.3
MS.gene08354.t1 AT4G16765 31.884 207 114 9 151 345 42 233 1.87e-16 78.2
MS.gene08354.t1 AT1G35190 30.418 263 149 11 68 303 23 278 3.42e-16 79.0
MS.gene08354.t1 AT1G52800 27.376 263 165 11 77 328 38 285 1.19e-15 77.0
MS.gene08354.t1 AT1G28030 28.041 296 196 11 45 328 3 293 4.30e-15 75.5
MS.gene08354.t1 AT4G03070 27.124 306 187 12 55 339 14 304 7.43e-14 72.0
MS.gene08354.t1 AT4G16770 29.858 211 127 9 77 269 42 249 2.07e-13 69.7
MS.gene08354.t1 AT4G22870 42.857 84 47 1 245 327 2 85 2.80e-13 66.2
MS.gene08354.t1 AT5G58660 25.000 280 153 10 45 282 14 278 3.96e-13 69.3
MS.gene08354.t1 AT4G16765 35.833 120 70 3 226 340 77 194 6.79e-13 67.4
MS.gene08354.t1 AT3G46500 26.984 189 125 6 170 350 1 184 2.69e-12 65.5
MS.gene08354.t1 AT4G22870 40.230 87 48 2 245 327 40 126 1.05e-11 62.8

Find 69 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTTCTGCTTCAAATT+TGG 0.136100 4.1:-17040066 None:intergenic
TTCCTTCATATCCATCTTTA+TGG 0.137991 4.1:-17039249 None:intergenic
ACCAAATTTGAAGCAGAAAT+TGG 0.176209 4.1:+17040065 MS.gene08354:CDS
AGGATTGAGGGTTCTTTATC+TGG 0.179313 4.1:-17038371 None:intergenic
GAGAGTACTCATTCAATTCT+TGG 0.214031 4.1:+17038290 MS.gene08354:CDS
ACCATCCTTAATCAGCTTAA+TGG 0.230605 4.1:+17039386 MS.gene08354:CDS
CAACTCCATTAAGCTGATTA+AGG 0.246921 4.1:-17039391 None:intergenic
TCATTCAATTCTTGGTGTTA+TGG 0.254788 4.1:+17038298 MS.gene08354:CDS
AGATTAAGAAAGATGGAGTT+TGG 0.278559 4.1:+17039423 MS.gene08354:CDS
CAAAGATTGGGGTTTCTTCC+AGG 0.305283 4.1:+17038493 MS.gene08354:CDS
TTTGTTCAAAAGCATGTTGA+TGG 0.327425 4.1:+17040124 MS.gene08354:CDS
TGTGGCTTTCTTCTTGCAAT+AGG 0.330734 4.1:-17038948 None:intergenic
GAACTTATCAAACTCTTTGC+TGG 0.345699 4.1:-17040089 None:intergenic
CGTCGACGAGCTCCGGTTGC+GGG 0.349345 4.1:-17039331 None:intergenic
AGGGATTGGTTTCATTTGTT+AGG 0.354880 4.1:-17038391 None:intergenic
AGTGATTAATAAACCCGAAA+TGG 0.356205 4.1:+17038325 MS.gene08354:CDS
GTTTCATTTGTTAGGATTGA+GGG 0.372259 4.1:-17038383 None:intergenic
ATGATGGAAATCAATCAATA+AGG 0.373969 4.1:+17039288 MS.gene08354:CDS
TATTCTCAGCATGCAAAGAT+TGG 0.378321 4.1:+17038480 MS.gene08354:CDS
ATTCTCAGCATGCAAAGATT+GGG 0.402514 4.1:+17038481 MS.gene08354:CDS
ACGAGCTCCGGTTGCGGGCA+TGG 0.404443 4.1:-17039326 None:intergenic
GGTTTCATTTGTTAGGATTG+AGG 0.421433 4.1:-17038384 None:intergenic
GGACTAGAGATTAAGAAAGA+TGG 0.432535 4.1:+17039416 MS.gene08354:CDS
GGGAATTGATTGCAAGGGAT+TGG 0.443437 4.1:-17038405 None:intergenic
CCGTCGACGAGCTCCGGTTG+CGG 0.448496 4.1:-17039332 None:intergenic
CTATCCGCCATGCCCGCAAC+CGG 0.448538 4.1:+17039319 MS.gene08354:CDS
AGTATTGTCACCACATATCA+AGG 0.455503 4.1:-17038444 None:intergenic
AATCAGCTTAATGGAGTTGA+AGG 0.457519 4.1:+17039395 MS.gene08354:CDS
GATAAGCACCTTAGTGATGA+TGG 0.459040 4.1:-17038987 None:intergenic
GTGATTAATAAACCCGAAAT+GGG 0.460139 4.1:+17038326 MS.gene08354:CDS
ATATTAACTACAAAAGCATC+TGG 0.461880 4.1:-17039464 None:intergenic
ATCTTAGAATTGAAGAAACT+TGG 0.471265 4.1:+17039197 MS.gene08354:CDS
AGCCATAAAGATGGATATGA+AGG 0.476955 4.1:+17039247 MS.gene08354:CDS
TACAAAAGCATCTGGAAGAA+AGG 0.481736 4.1:-17039456 None:intergenic
TTGATGCCGTCGACGAGCTC+CGG 0.485676 4.1:-17039338 None:intergenic
ATGCCGGAGCCGTCGGAGTG+AGG 0.487266 4.1:-17039362 None:intergenic
GTAGAGAATATGTTTGATGA+TGG 0.488444 4.1:+17039272 MS.gene08354:CDS
GGATTGAGGGTTCTTTATCT+GGG 0.495260 4.1:-17038370 None:intergenic
TCTAAATGGGAAGACAAACT+TGG 0.498065 4.1:+17040178 MS.gene08354:CDS
AATCAACATGGCATCATCTC+AGG 0.499386 4.1:+17038253 None:intergenic
AACCCTCACTCCGACGGCTC+CGG 0.507522 4.1:+17039359 MS.gene08354:CDS
AGTTAATATTGGAGACATCA+TGG 0.510828 4.1:+17039478 MS.gene08354:CDS
TGCCGGAGCCGTCGGAGTGA+GGG 0.514870 4.1:-17039361 None:intergenic
GACTTTCAAACCTTGATATG+TGG 0.523264 4.1:+17038434 MS.gene08354:CDS
CTGATTAAGGATGGTTATGC+CGG 0.526310 4.1:-17039378 None:intergenic
GGTTTCAGTAAACAAAGAAA+AGG 0.544690 4.1:+17040013 MS.gene08354:CDS
ATTGGGAAAAGCCATAAAGA+TGG 0.547819 4.1:+17039238 MS.gene08354:CDS
AGACAAACTTGGAGAGAATG+AGG 0.547939 4.1:+17040189 MS.gene08354:CDS
GATGGTTATGCCGGAGCCGT+CGG 0.550223 4.1:-17039369 None:intergenic
TCCATTAAGCTGATTAAGGA+TGG 0.551241 4.1:-17039387 None:intergenic
CTCAACTCCCATCATCACTA+AGG 0.551331 4.1:+17038979 MS.gene08354:CDS
TCTACTCTAGCATAGAGCAC+AGG 0.552312 4.1:+17039991 MS.gene08354:CDS
GCATATGTGAAGGGATACCT+TGG 0.558232 4.1:+17039166 MS.gene08354:intron
TTCTCAGCATGCAAAGATTG+GGG 0.568244 4.1:+17038482 MS.gene08354:CDS
CTTAGTGATGATGGGAGTTG+AGG 0.569423 4.1:-17038978 None:intergenic
CCGCAACCGGAGCTCGTCGA+CGG 0.573036 4.1:+17039332 MS.gene08354:CDS
GGAGCTGTCATTAGATGTGA+AGG 0.581827 4.1:+17038882 MS.gene08354:CDS
TTCTAAGATATATGACTCCA+AGG 0.586022 4.1:-17039183 None:intergenic
ATAAGCACCTTAGTGATGAT+GGG 0.587837 4.1:-17038986 None:intergenic
TATATGCAGGTGGTGAATCA+CGG 0.608081 4.1:+17038747 MS.gene08354:intron
GCATCTGGAAGAAAGGTCAC+AGG 0.608787 4.1:-17039449 None:intergenic
CTACTCTAGCATAGAGCACA+GGG 0.608995 4.1:+17039992 MS.gene08354:CDS
AAAACGGGAATTGATTGCAA+GGG 0.620044 4.1:-17038410 None:intergenic
GGCATCAACCCTCACTCCGA+CGG 0.624424 4.1:+17039353 MS.gene08354:CDS
AGCTCCGGTTGCGGGCATGG+CGG 0.627520 4.1:-17039323 None:intergenic
CAACATGGCATCATCTCAGG+TGG 0.641861 4.1:+17038256 None:intergenic
TTTACAGATTCTAAGCAATG+GGG 0.672405 4.1:+17039968 MS.gene08354:intron
ACAAAATACAAAATAAGACA+AGG 0.680547 4.1:+17038843 MS.gene08354:CDS
TAATATTGGAGACATCATGG+AGG 0.754731 4.1:+17039481 MS.gene08354:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATATAGTATCTAATT+AGG - chr4.1:17039123-17039142 None:intergenic 10.0%
!! TGAATATATATCTTAAAAAT+TGG + chr4.1:17038602-17038621 MS.gene08354:intron 10.0%
!!! TTTTGCATTTTTTTTTTTTA+TGG + chr4.1:17038693-17038712 MS.gene08354:intron 10.0%
!! AGTTGAATAAAAATTACATA+TGG - chr4.1:17039072-17039091 None:intergenic 15.0%
!! ATTTATATAATAGGTATAGT+AGG - chr4.1:17039595-17039614 None:intergenic 15.0%
!!! ATTTCTTGAAAAAAAGTATT+TGG - chr4.1:17040159-17040178 None:intergenic 15.0%
!!! TTATCTTTTTGATACAATAA+TGG - chr4.1:17039691-17039710 None:intergenic 15.0%
!!! TTTTTTCAAGAAATCTAAAT+GGG + chr4.1:17040165-17040184 MS.gene08354:CDS 15.0%
!!! TTTTTTTCAAGAAATCTAAA+TGG + chr4.1:17040164-17040183 MS.gene08354:CDS 15.0%
!! ACAAAATACAAAATAAGACA+AGG + chr4.1:17038843-17038862 MS.gene08354:CDS 20.0%
!!! ATATCTTTAACTCATGTTTT+GGG + chr4.1:17039941-17039960 MS.gene08354:intron 20.0%
!!! ATGACACTTTTTGAATTATT+GGG + chr4.1:17039221-17039240 MS.gene08354:CDS 20.0%
!!! CAATAAAAAATGTGCTATTT+AGG - chr4.1:17039776-17039795 None:intergenic 20.0%
!!! CTAAATAGCACATTTTTTAT+TGG + chr4.1:17039774-17039793 MS.gene08354:intron 20.0%
!!! TTTTAATAACTCTCTTCTTA+GGG + chr4.1:17039840-17039859 MS.gene08354:intron 20.0%
! AAATTGATGCAATTATATGC+AGG + chr4.1:17038734-17038753 MS.gene08354:intron 25.0%
! ATCTTAGAATTGAAGAAACT+TGG + chr4.1:17039197-17039216 MS.gene08354:CDS 25.0%
! CTAAGAAGAGAGTTATTAAA+AGG - chr4.1:17039841-17039860 None:intergenic 25.0%
! CTTAGGGTTTCATTAAAAAA+TGG + chr4.1:17039856-17039875 MS.gene08354:intron 25.0%
! TGTAATAATGGCATTATTTG+TGG + chr4.1:17039734-17039753 MS.gene08354:intron 25.0%
!! ATGATGGAAATCAATCAATA+AGG + chr4.1:17039288-17039307 MS.gene08354:CDS 25.0%
!! ATTTTACAGATTCTAAGCAA+TGG + chr4.1:17039966-17039985 MS.gene08354:intron 25.0%
!! ATTTTTGTATGCATATGTGA+AGG + chr4.1:17039156-17039175 MS.gene08354:intron 25.0%
!! CATATCTTTAACTCATGTTT+TGG + chr4.1:17039940-17039959 MS.gene08354:intron 25.0%
!! CTTTTAATAACTCTCTTCTT+AGG + chr4.1:17039839-17039858 MS.gene08354:intron 25.0%
!! GATGCTTTTGTAGTTAATAT+TGG + chr4.1:17039467-17039486 MS.gene08354:CDS 25.0%
!! TTTTACAGATTCTAAGCAAT+GGG + chr4.1:17039967-17039986 MS.gene08354:intron 25.0%
!! TTTTTGTATGCATATGTGAA+GGG + chr4.1:17039157-17039176 MS.gene08354:intron 25.0%
!!! ATATTAACTACAAAAGCATC+TGG - chr4.1:17039467-17039486 None:intergenic 25.0%
!!! CATGACACTTTTTGAATTAT+TGG + chr4.1:17039220-17039239 MS.gene08354:CDS 25.0%
!!! TATTTTGTTTTCTCTTCAAC+AGG - chr4.1:17038831-17038850 None:intergenic 25.0%
AAGGTTTGAAAGTCAAAAAC+GGG - chr4.1:17038428-17038447 None:intergenic 30.0%
ACAGGAAGCTTGAAAAAATT+TGG - chr4.1:17038813-17038832 None:intergenic 30.0%
AGATTAAGAAAGATGGAGTT+TGG + chr4.1:17039423-17039442 MS.gene08354:CDS 30.0%
AGTGATTAATAAACCCGAAA+TGG + chr4.1:17038325-17038344 MS.gene08354:CDS 30.0%
AGTTAATATTGGAGACATCA+TGG + chr4.1:17039478-17039497 MS.gene08354:CDS 30.0%
CAAGGTTTGAAAGTCAAAAA+CGG - chr4.1:17038429-17038448 None:intergenic 30.0%
CATGTGTTATGGTGTAATAA+TGG + chr4.1:17039722-17039741 MS.gene08354:intron 30.0%
GAGTTATTAAAAGGAAGATG+AGG - chr4.1:17039832-17039851 None:intergenic 30.0%
GGTTTCAGTAAACAAAGAAA+AGG + chr4.1:17040013-17040032 MS.gene08354:CDS 30.0%
GTAGAGAATATGTTTGATGA+TGG + chr4.1:17039272-17039291 MS.gene08354:CDS 30.0%
GTGATTAATAAACCCGAAAT+GGG + chr4.1:17038326-17038345 MS.gene08354:CDS 30.0%
TCCAATTTCTGCTTCAAATT+TGG - chr4.1:17040069-17040088 None:intergenic 30.0%
TGAAGGTCAAAAACTTGATT+GGG + chr4.1:17038899-17038918 MS.gene08354:CDS 30.0%
TTATTACACCATAACACATG+TGG - chr4.1:17039722-17039741 None:intergenic 30.0%
TTCCTTCATATCCATCTTTA+TGG - chr4.1:17039252-17039271 None:intergenic 30.0%
TTTACAGATTCTAAGCAATG+GGG + chr4.1:17039968-17039987 MS.gene08354:intron 30.0%
! ACCAAATTTGAAGCAGAAAT+TGG + chr4.1:17040065-17040084 MS.gene08354:CDS 30.0%
! ATAAGACAAGGAGATTTTCA+AGG + chr4.1:17038855-17038874 MS.gene08354:CDS 30.0%
! ATCAACATGCTTTTGAACAA+AGG - chr4.1:17040125-17040144 None:intergenic 30.0%
! CTATTTAGGAGCATATTGAA+TGG - chr4.1:17039762-17039781 None:intergenic 30.0%
! GTTTCATTTGTTAGGATTGA+GGG - chr4.1:17038386-17038405 None:intergenic 30.0%
! TAGTATTTTCAATGAGTCGT+GGG + chr4.1:17039652-17039671 MS.gene08354:intron 30.0%
! TGAACTCTAGTTTATAAACC+TGG - chr4.1:17038514-17038533 None:intergenic 30.0%
! TTTGTTCAAAAGCATGTTGA+TGG + chr4.1:17040124-17040143 MS.gene08354:CDS 30.0%
!! TCATTCAATTCTTGGTGTTA+TGG + chr4.1:17038298-17038317 MS.gene08354:CDS 30.0%
!! TTCTAAGATATATGACTCCA+AGG - chr4.1:17039186-17039205 None:intergenic 30.0%
!!! ATTTTTGGTATTCCCATTTC+GGG - chr4.1:17038341-17038360 None:intergenic 30.0%
!!! CATTTTTGGTATTCCCATTT+CGG - chr4.1:17038342-17038361 None:intergenic 30.0%
AAAAACGGGAATTGATTGCA+AGG - chr4.1:17038414-17038433 None:intergenic 35.0%
AAAACGGGAATTGATTGCAA+GGG - chr4.1:17038413-17038432 None:intergenic 35.0%
AATCAGCTTAATGGAGTTGA+AGG + chr4.1:17039395-17039414 MS.gene08354:CDS 35.0%
ACCATCCTTAATCAGCTTAA+TGG + chr4.1:17039386-17039405 MS.gene08354:CDS 35.0%
AGCCATAAAGATGGATATGA+AGG + chr4.1:17039247-17039266 MS.gene08354:CDS 35.0%
AGTATTGTCACCACATATCA+AGG - chr4.1:17038447-17038466 None:intergenic 35.0%
ATAAGCACCTTAGTGATGAT+GGG - chr4.1:17038989-17039008 None:intergenic 35.0%
ATAATAGGTATAGTAGGACC+TGG - chr4.1:17039589-17039608 None:intergenic 35.0%
ATTAAAAGGAAGATGAGGCA+TGG - chr4.1:17039827-17039846 None:intergenic 35.0%
ATTCTCAGCATGCAAAGATT+GGG + chr4.1:17038481-17038500 MS.gene08354:CDS 35.0%
ATTGGGAAAAGCCATAAAGA+TGG + chr4.1:17039238-17039257 MS.gene08354:CDS 35.0%
CAACTCCATTAAGCTGATTA+AGG - chr4.1:17039394-17039413 None:intergenic 35.0%
GAACTTATCAAACTCTTTGC+TGG - chr4.1:17040092-17040111 None:intergenic 35.0%
GAAGGTCAAAAACTTGATTG+GGG + chr4.1:17038900-17038919 MS.gene08354:CDS 35.0%
GACTTTCAAACCTTGATATG+TGG + chr4.1:17038434-17038453 MS.gene08354:CDS 35.0%
GGACTAGAGATTAAGAAAGA+TGG + chr4.1:17039416-17039435 MS.gene08354:CDS 35.0%
GTGAAGGTCAAAAACTTGAT+TGG + chr4.1:17038898-17038917 MS.gene08354:CDS 35.0%
TAATATTGGAGACATCATGG+AGG + chr4.1:17039481-17039500 MS.gene08354:CDS 35.0%
TATTCTCAGCATGCAAAGAT+TGG + chr4.1:17038480-17038499 MS.gene08354:CDS 35.0%
TCCATTAAGCTGATTAAGGA+TGG - chr4.1:17039390-17039409 None:intergenic 35.0%
TCTAAATGGGAAGACAAACT+TGG + chr4.1:17040178-17040197 MS.gene08354:CDS 35.0%
TGACAATGAAATAAAGCACG+TGG + chr4.1:17039554-17039573 MS.gene08354:intron 35.0%
TGCTAAATCCACATGTGTTA+TGG + chr4.1:17039711-17039730 MS.gene08354:intron 35.0%
TTAAAAGGAAGATGAGGCAT+GGG - chr4.1:17039826-17039845 None:intergenic 35.0%
TTGATGCAATTATATGCAGG+TGG + chr4.1:17038737-17038756 MS.gene08354:intron 35.0%
! AACATGCTTTTGAACAAAGG+TGG - chr4.1:17040122-17040141 None:intergenic 35.0%
! GGTTTCATTTGTTAGGATTG+AGG - chr4.1:17038387-17038406 None:intergenic 35.0%
! GTAGTATTTTCAATGAGTCG+TGG + chr4.1:17039651-17039670 MS.gene08354:intron 35.0%
!! AGGGATTGGTTTCATTTGTT+AGG - chr4.1:17038394-17038413 None:intergenic 35.0%
!! CAAGGAGATTTTCAAGGTTA+TGG + chr4.1:17038861-17038880 MS.gene08354:CDS 35.0%
!! GAGAGTACTCATTCAATTCT+TGG + chr4.1:17038290-17038309 MS.gene08354:CDS 35.0%
!! TACAAAAGCATCTGGAAGAA+AGG - chr4.1:17039459-17039478 None:intergenic 35.0%
AGACAAACTTGGAGAGAATG+AGG + chr4.1:17040189-17040208 MS.gene08354:CDS 40.0%
AGGATTGAGGGTTCTTTATC+TGG - chr4.1:17038374-17038393 None:intergenic 40.0%
CTGATTAAGGATGGTTATGC+CGG - chr4.1:17039381-17039400 None:intergenic 40.0%
GATAAGCACCTTAGTGATGA+TGG - chr4.1:17038990-17039009 None:intergenic 40.0%
GGATTGAGGGTTCTTTATCT+GGG - chr4.1:17038373-17038392 None:intergenic 40.0%
TATATGCAGGTGGTGAATCA+CGG + chr4.1:17038747-17038766 MS.gene08354:intron 40.0%
TGTGGCTTTCTTCTTGCAAT+AGG - chr4.1:17038951-17038970 None:intergenic 40.0%
TTCTCAGCATGCAAAGATTG+GGG + chr4.1:17038482-17038501 MS.gene08354:CDS 40.0%
! TCTGGGCGAAGAAACATTTT+TGG - chr4.1:17038356-17038375 None:intergenic 40.0%
CAAAGATTGGGGTTTCTTCC+AGG + chr4.1:17038493-17038512 MS.gene08354:CDS 45.0%
CTACTCTAGCATAGAGCACA+GGG + chr4.1:17039992-17040011 MS.gene08354:CDS 45.0%
CTCAACTCCCATCATCACTA+AGG + chr4.1:17038979-17038998 MS.gene08354:CDS 45.0%
GCATATGTGAAGGGATACCT+TGG + chr4.1:17039166-17039185 MS.gene08354:intron 45.0%
GGAGCTGTCATTAGATGTGA+AGG + chr4.1:17038882-17038901 MS.gene08354:CDS 45.0%
GGGAATTGATTGCAAGGGAT+TGG - chr4.1:17038408-17038427 None:intergenic 45.0%
GGGAGTTGAGGAAAAAGATG+TGG - chr4.1:17038969-17038988 None:intergenic 45.0%
TCTACTCTAGCATAGAGCAC+AGG + chr4.1:17039991-17040010 MS.gene08354:CDS 45.0%
!! CTTAGTGATGATGGGAGTTG+AGG - chr4.1:17038981-17039000 None:intergenic 45.0%
!! ATCAAATTAATTTATATAAT+AGG - chr4.1:17039604-17039623 None:intergenic 5.0%
AGCACGTGGTGTATTGAACC+AGG + chr4.1:17039568-17039587 MS.gene08354:intron 50.0%
GCATCTGGAAGAAAGGTCAC+AGG - chr4.1:17039452-17039471 None:intergenic 50.0%
GATGGTTATGCCGGAGCCGT+CGG - chr4.1:17039372-17039391 None:intergenic 60.0%
GGCATCAACCCTCACTCCGA+CGG + chr4.1:17039353-17039372 MS.gene08354:CDS 60.0%
TTGATGCCGTCGACGAGCTC+CGG - chr4.1:17039341-17039360 None:intergenic 60.0%
AACCCTCACTCCGACGGCTC+CGG + chr4.1:17039359-17039378 MS.gene08354:CDS 65.0%
CTATCCGCCATGCCCGCAAC+CGG + chr4.1:17039319-17039338 MS.gene08354:CDS 65.0%
ACGAGCTCCGGTTGCGGGCA+TGG - chr4.1:17039329-17039348 None:intergenic 70.0%
AGCTCCGGTTGCGGGCATGG+CGG - chr4.1:17039326-17039345 None:intergenic 70.0%
ATGCCGGAGCCGTCGGAGTG+AGG - chr4.1:17039365-17039384 None:intergenic 70.0%
CCGCAACCGGAGCTCGTCGA+CGG + chr4.1:17039332-17039351 MS.gene08354:CDS 70.0%
CCGTCGACGAGCTCCGGTTG+CGG - chr4.1:17039335-17039354 None:intergenic 70.0%
CGTCGACGAGCTCCGGTTGC+GGG - chr4.1:17039334-17039353 None:intergenic 70.0%
TGCCGGAGCCGTCGGAGTGA+GGG - chr4.1:17039364-17039383 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 17038260 17040217 17038260 ID=MS.gene08354
chr4.1 mRNA 17038260 17040217 17038260 ID=MS.gene08354.t1;Parent=MS.gene08354
chr4.1 exon 17038260 17038514 17038260 ID=MS.gene08354.t1.exon1;Parent=MS.gene08354.t1
chr4.1 CDS 17038260 17038514 17038260 ID=cds.MS.gene08354.t1;Parent=MS.gene08354.t1
chr4.1 exon 17038756 17039000 17038756 ID=MS.gene08354.t1.exon2;Parent=MS.gene08354.t1
chr4.1 CDS 17038756 17039000 17038756 ID=cds.MS.gene08354.t1;Parent=MS.gene08354.t1
chr4.1 exon 17039178 17039502 17039178 ID=MS.gene08354.t1.exon3;Parent=MS.gene08354.t1
chr4.1 CDS 17039178 17039502 17039178 ID=cds.MS.gene08354.t1;Parent=MS.gene08354.t1
chr4.1 exon 17039975 17040217 17039975 ID=MS.gene08354.t1.exon4;Parent=MS.gene08354.t1
chr4.1 CDS 17039975 17040217 17039975 ID=cds.MS.gene08354.t1;Parent=MS.gene08354.t1
Gene Sequence

>MS.gene08354

ATGGCATCATCTCAGGTGGCTAATATCTTTGAGAGTACTCATTCAATTCTTGGTGTTATGGATGAAGTGATTAATAAACCCGAAATGGGAATACCAAAAATGTTTCTTCGCCCAGATAAAGAACCCTCAATCCTAACAAATGAAACCAATCCCTTGCAATCAATTCCCGTTTTTGACTTTCAAACCTTGATATGTGGTGACAATACTGAACTTGACAAGTTATTCTCAGCATGCAAAGATTGGGGTTTCTTCCAGGTTTATAAACTAGAGTTCAATTCGTGTTCATCTATCGCGTAGAAAAAAATTTGTGCGCATCAAATCACATCTCAAAAAATAGATATTTGAATATATATCTTAAAAATTGGTGTAACATAGTGACACAATGATTGAATATATGTGTACAAATTAAGTTCTCTAGTTAAGTTATTGTTGTTTTTGCATTTTTTTTTTTTATGGTGTACAAAATCATTACTGAAATTGATGCAATTATATGCAGGTGGTGAATCACGGTATTAGCTCTGAATTGCTTGAGAAGCTGAAATTTGAGATTCCAAATTTTTTCAAGCTTCCTGTTGAAGAGAAAACAAAATACAAAATAAGACAAGGAGATTTTCAAGGTTATGGAGCTGTCATTAGATGTGAAGGTCAAAAACTTGATTGGGGTGACAGATTCTTCATGATTACAAATCCTATTGCAAGAAGAAAGCCACATCTTTTTCCTCAACTCCCATCATCACTAAGGTGCTTATCATAATTTCATGTTTCTAATCTATCTAAAATGTTAATATAGTTTTAGATACAAAATTGTTCCATATGTAATTTTTATTCAACTTTGTGATGTGACAACTTTGTGATTTAAACCTAATTAGATACTATATATTATATATATAAATCTCATTTTTGTATGCATATGTGAAGGGATACCTTGGAGTCATATATCTTAGAATTGAAGAAACTTGGCATGACACTTTTTGAATTATTGGGAAAAGCCATAAAGATGGATATGAAGGAAGTAGAGAATATGTTTGATGATGGAAATCAATCAATAAGGATGACATACTATCCGCCATGCCCGCAACCGGAGCTCGTCGACGGCATCAACCCTCACTCCGACGGCTCCGGCATAACCATCCTTAATCAGCTTAATGGAGTTGAAGGACTAGAGATTAAGAAAGATGGAGTTTGGATTCCTGTGACCTTTCTTCCAGATGCTTTTGTAGTTAATATTGGAGACATCATGGAGGTTTGTCATTATTTTCTCTCATTTTCATACTTTTTTTTATTCTTCTTATTTTGACAATGAAATAAAGCACGTGGTGTATTGAACCAGGTCCTACTATACCTATTATATAAATTAATTTGATTCTTCGAATCAATTTATCAATATAAAAGTAGTATTTTCAATGAGTCGTGGGCGTTGTAATCATACCATTATTGTATCAAAAAGATAATGCTAAATCCACATGTGTTATGGTGTAATAATGGCATTATTTGTGGTGCCATTCAATATGCTCCTAAATAGCACATTTTTTATTGGAAACAGATTTTATTTGTCTACTACTACCCATGCCTCATCTTCCTTTTAATAACTCTCTTCTTAGGGTTTCATTAAAAAATGGAGTCTTAAACATGAACAAAAAAAAATCTACTACAAATTAAAACATGTCAAATAGTGTTTTTCATATCTTTAACTCATGTTTTGGGTGATTTTACAGATTCTAAGCAATGGGGTCTACTCTAGCATAGAGCACAGGGTTTCAGTAAACAAAGAAAAGGAGAGAGTTTCTGTTGCTATGTTCTTCAACACCAAATTTGAAGCAGAAATTGGACCAGCAAAGAGTTTGATAAGTTCTGAAAATCCACCTTTGTTCAAAAGCATGTTGATGGAAGAATACTCCAAATACTTTTTTTCAAGAAATCTAAATGGGAAGACAAACTTGGAGAGAATGAGGATTTAA
Protein sequence

>MS.gene08354.t1

MASSQVANIFESTHSILGVMDEVINKPEMGIPKMFLRPDKEPSILTNETNPLQSIPVFDFQTLICGDNTELDKLFSACKDWGFFQVVNHGISSELLEKLKFEIPNFFKLPVEEKTKYKIRQGDFQGYGAVIRCEGQKLDWGDRFFMITNPIARRKPHLFPQLPSSLRDTLESYILELKKLGMTLFELLGKAIKMDMKEVENMFDDGNQSIRMTYYPPCPQPELVDGINPHSDGSGITILNQLNGVEGLEIKKDGVWIPVTFLPDAFVVNIGDIMEILSNGVYSSIEHRVSVNKEKERVSVAMFFNTKFEAEIGPAKSLISSENPPLFKSMLMEEYSKYFFSRNLNGKTNLERMRI