Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08754.t1 | XP_003606369.2 | 98.2 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.00E+00 | 1870.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08754.t1 | G7JND6 | 98.2 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.0e+00 | 1870.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene08754 | 0.8195 | 1.12E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene08754 | 0.816597 | 5.10E-52 | -1.69E-46 |
| MS.gene049313 | MS.gene08754 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene050129 | MS.gene08754 | 0.904044 | 1.85E-79 | -1.69E-46 |
| MS.gene050363 | MS.gene08754 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene08754 | 0.827099 | 1.89E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene08754 | 0.808465 | 3.06E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene08754 | 0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene08754 | 0.821029 | 5.02E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene08754 | 0.801373 | 9.29E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene08754 | 0.811181 | 7.96E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene08754 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene08754 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene056550 | MS.gene08754 | 0.835431 | 1.69E-56 | -1.69E-46 |
| MS.gene056761 | MS.gene08754 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene08754 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene08754 | -0.819196 | 1.32E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08754.t1 | MTR_4g058760 | 98.184 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.0 | 1918 |
| MS.gene08754.t1 | MTR_8g023050 | 27.795 | 331 | 189 | 10 | 592 | 888 | 52 | 366 | 8.66e-30 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08754.t1 | AT5G60700 | 80.085 | 939 | 177 | 4 | 1 | 936 | 1 | 932 | 0.0 | 1567 |
| MS.gene08754.t1 | AT5G60700 | 86.228 | 668 | 92 | 0 | 269 | 936 | 1 | 668 | 0.0 | 1216 |
| MS.gene08754.t1 | AT5G12260 | 30.597 | 268 | 147 | 10 | 605 | 846 | 73 | 327 | 1.62e-27 | 119 |
Find 154 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGGTTTGGAAAATT+TGG | 0.065005 | 4.2:+44683033 | None:intergenic |
| CCCCATGTTTCTTTGTCTTT+TGG | 0.116342 | 4.2:+44684787 | None:intergenic |
| CCATCTTCAGATGACAATTT+TGG | 0.116513 | 4.2:-44683471 | MS.gene08754:CDS |
| AAAGAAAATGTTGGAGATTT+TGG | 0.133809 | 4.2:-44686298 | MS.gene08754:CDS |
| TTAGGTGTTGGTTCAATTTC+CGG | 0.192943 | 4.2:-44684427 | MS.gene08754:CDS |
| TTTGGTTATTGTTGTCTTCT+TGG | 0.220951 | 4.2:+44686811 | None:intergenic |
| CAACCATTTGTTCTTGATTT+CGG | 0.225293 | 4.2:+44683120 | None:intergenic |
| TTGACAACTTCAACAATTCT+TGG | 0.227499 | 4.2:+44683321 | None:intergenic |
| TAAAACTCTCTCCAATGTTT+AGG | 0.235717 | 4.2:+44683198 | None:intergenic |
| CGGTTTAAGATCTTTGATTT+AGG | 0.251865 | 4.2:-44684445 | MS.gene08754:CDS |
| AGGGAGATGGAAGAGAGTTC+TGG | 0.270847 | 4.2:+44683351 | None:intergenic |
| GAATTGTTGTTGCTTGAATT+TGG | 0.273305 | 4.2:+44686793 | None:intergenic |
| TTAGTGAATTTACCCTGTTT+TGG | 0.274450 | 4.2:+44683688 | None:intergenic |
| CAATCAAGCTGTTTCTCTTA+AGG | 0.280030 | 4.2:-44682842 | MS.gene08754:CDS |
| TGTGGTTAAGCATAATAAAA+TGG | 0.289497 | 4.2:-44682959 | MS.gene08754:CDS |
| AAAGTATAAGAATTCTGTTT+TGG | 0.290647 | 4.2:-44686256 | MS.gene08754:CDS |
| GAATACACTGCTTGTATAAC+TGG | 0.310239 | 4.2:+44684385 | None:intergenic |
| AGCTCTCAAATGGCCTCTTT+TGG | 0.312366 | 4.2:-44684482 | MS.gene08754:CDS |
| CAACAATTCTTGGTGTGTAT+AGG | 0.312888 | 4.2:+44683331 | None:intergenic |
| TCACCAGTTGAGAAGGTAAA+AGG | 0.315759 | 4.2:+44686033 | None:intergenic |
| AACAATTCTTGGTGTGTATA+GGG | 0.318766 | 4.2:+44683332 | None:intergenic |
| AATCAAGCTGTTTCTCTTAA+GGG | 0.319362 | 4.2:-44682841 | MS.gene08754:CDS |
| CTCTTGAGGGACGCCTCGTT+TGG | 0.323081 | 4.2:+44686459 | None:intergenic |
| TAGGTGTTGGTTCAATTTCC+GGG | 0.324598 | 4.2:-44684426 | MS.gene08754:CDS |
| TTTGCAAACAGAAGCTGATT+TGG | 0.328260 | 4.2:-44686352 | MS.gene08754:CDS |
| AAAACTCTCTCCAATGTTTA+GGG | 0.348787 | 4.2:+44683199 | None:intergenic |
| CTTGATTTCGGAATTTGAAC+CGG | 0.360455 | 4.2:+44683132 | None:intergenic |
| TTCATCAATTACCTTGTAGT+TGG | 0.366831 | 4.2:-44683236 | MS.gene08754:CDS |
| TCATCAATTACCTTGTAGTT+GGG | 0.371809 | 4.2:-44683235 | MS.gene08754:CDS |
| GGGAGATGGAAGAGAGTTCT+GGG | 0.371894 | 4.2:+44683352 | None:intergenic |
| GACTTAAATTTCCTATAACT+TGG | 0.376357 | 4.2:+44686186 | None:intergenic |
| TTGATCCATAGGTAGTAATA+AGG | 0.377040 | 4.2:+44683417 | None:intergenic |
| TGAGAGAAGATGCAGCTTCT+TGG | 0.384331 | 4.2:+44686835 | None:intergenic |
| CAAATGGTTGGCAAGCTTCA+TGG | 0.386635 | 4.2:-44683107 | MS.gene08754:CDS |
| CTATCCATGTTGAAAGTGAT+TGG | 0.388496 | 4.2:+44683615 | None:intergenic |
| TGTGCAATTCTTGAGAAATC+TGG | 0.389282 | 4.2:+44686903 | None:intergenic |
| AAGATCTTTGATTTAGGTGT+TGG | 0.391823 | 4.2:-44684439 | MS.gene08754:CDS |
| TCAACATCATAACCCAAAAC+AGG | 0.393205 | 4.2:-44683701 | MS.gene08754:CDS |
| TATTCTGTCGCATTCCATTT+CGG | 0.393945 | 4.2:+44683291 | None:intergenic |
| AACTAGTAGGTTCATTTGAA+TGG | 0.394328 | 4.2:-44683569 | MS.gene08754:CDS |
| TGGACCTTTCAAATCCCATT+TGG | 0.397443 | 4.2:+44686611 | None:intergenic |
| GCTTCAGAAACTAATTCAAA+TGG | 0.399454 | 4.2:-44684271 | MS.gene08754:CDS |
| TACTGTTGTTTCTGATACAT+AGG | 0.399588 | 4.2:+44684744 | None:intergenic |
| GCTTTCCACGATTCTCTTGA+GGG | 0.406469 | 4.2:+44686446 | None:intergenic |
| TGATGAAGGTAAGGTGTGTT+TGG | 0.414604 | 4.2:+44683252 | None:intergenic |
| GAGAAACAGCTTGATTGAAA+AGG | 0.419242 | 4.2:+44682848 | None:intergenic |
| AATTCTTGAGAAATCTGGTT+TGG | 0.422536 | 4.2:+44686908 | None:intergenic |
| AGCACCCAAATTTGATGAAA+AGG | 0.424496 | 4.2:+44686495 | None:intergenic |
| CGTTCTTTGCAAACCAAAAG+AGG | 0.426034 | 4.2:+44684469 | None:intergenic |
| TAAAGCTGCTGGTGCTAAGT+TGG | 0.428332 | 4.2:-44682815 | MS.gene08754:CDS |
| TCCACAGTAATTACAACACT+TGG | 0.428866 | 4.2:+44684331 | None:intergenic |
| AGCAGTGTATTCTAGTTTGA+AGG | 0.435732 | 4.2:-44684374 | MS.gene08754:CDS |
| TAATGAACATGAAATCCAAA+TGG | 0.437665 | 4.2:-44686626 | MS.gene08754:CDS |
| AAATTTGGGTGCTTTCGTTC+AGG | 0.438918 | 4.2:-44686485 | MS.gene08754:CDS |
| AAAGCATACATTGTTGTCTC+TGG | 0.442855 | 4.2:-44684538 | MS.gene08754:CDS |
| GGCGAGAAGTGGAGATTCCT+TGG | 0.445610 | 4.2:-44687090 | MS.gene08754:CDS |
| TCTCACCTTATTACTACCTA+TGG | 0.445983 | 4.2:-44683422 | MS.gene08754:CDS |
| AATTTCATCTCCTAGATAGT+AGG | 0.446568 | 4.2:+44683638 | None:intergenic |
| AAATTTAAGTCTAAAGAAGC+TGG | 0.448329 | 4.2:-44686174 | MS.gene08754:CDS |
| GAGAAACTTGAGGGTCATAA+TGG | 0.449253 | 4.2:+44683376 | None:intergenic |
| CTCACCAATGCCTACTATCT+AGG | 0.449528 | 4.2:-44683648 | MS.gene08754:CDS |
| ATTGATATGATGTATTTAAG+AGG | 0.454107 | 4.2:-44683072 | MS.gene08754:CDS |
| GATATTGCCATTTAGACAAA+AGG | 0.460055 | 4.2:-44686220 | MS.gene08754:CDS |
| ATGATCACACCACACATTGT+AGG | 0.461395 | 4.2:-44686864 | MS.gene08754:CDS |
| TTGGTTCTTAAATCAATTGA+AGG | 0.462460 | 4.2:+44686927 | None:intergenic |
| CACTATTGATAAAATTGTGC+AGG | 0.462476 | 4.2:-44686121 | MS.gene08754:CDS |
| AATTTCCAAAACAAAACCAT+TGG | 0.462676 | 4.2:-44686669 | MS.gene08754:CDS |
| ATTCCGAAATCAAGAACAAA+TGG | 0.465756 | 4.2:-44683123 | MS.gene08754:CDS |
| AAGCTGCAGCAGCTCTCAAA+TGG | 0.469839 | 4.2:-44684492 | MS.gene08754:CDS |
| GTTGCTGTTGATCATCATAC+TGG | 0.470551 | 4.2:-44682754 | MS.gene08754:CDS |
| TTGAAGTGTCTCAGTTCCAA+TGG | 0.470919 | 4.2:+44686653 | None:intergenic |
| CCAAAATTGTCATCTGAAGA+TGG | 0.471890 | 4.2:+44683471 | None:intergenic |
| AAAGAGAGAGCTTTATGAAG+AGG | 0.472811 | 4.2:-44686697 | MS.gene08754:CDS |
| TGTGAGAAAGGCTTTGAAGA+TGG | 0.472901 | 4.2:-44684293 | MS.gene08754:CDS |
| AAAGCTGCTGGTGCTAAGTT+GGG | 0.474235 | 4.2:-44682814 | MS.gene08754:CDS |
| ATGTTGAATGACTATGTTGC+TGG | 0.474502 | 4.2:-44687062 | MS.gene08754:CDS |
| TGGTGGAAAGCACTTTCATC+TGG | 0.474973 | 4.2:-44684685 | MS.gene08754:CDS |
| GTACTATGGAAGGTTTCAAA+TGG | 0.475657 | 4.2:-44686376 | MS.gene08754:CDS |
| CTTCAAAAGTATAGAAATGC+AGG | 0.477205 | 4.2:-44684832 | MS.gene08754:CDS |
| GAAGGTAAGGTGTGTTTGGA+TGG | 0.481855 | 4.2:+44683256 | None:intergenic |
| TTGTCAAAGAAAGACCGAAA+TGG | 0.487112 | 4.2:-44683305 | MS.gene08754:CDS |
| CTTCAGAAACTAATTCAAAT+GGG | 0.487507 | 4.2:-44684270 | MS.gene08754:CDS |
| CTTAAGGGACTTAAAGCTGC+TGG | 0.489733 | 4.2:-44682826 | MS.gene08754:CDS |
| GTGATATCATAAGCAGGATC+AGG | 0.492253 | 4.2:+44686141 | None:intergenic |
| GAAGCAACCATAAAACTAGT+AGG | 0.492724 | 4.2:-44683582 | MS.gene08754:CDS |
| CAAGGTAATTGATGAAGGTA+AGG | 0.495150 | 4.2:+44683243 | None:intergenic |
| TGAGTGCATATTTGATCCAT+AGG | 0.502316 | 4.2:+44683406 | None:intergenic |
| AATGAACATGAAATCCAAAT+GGG | 0.502594 | 4.2:-44686625 | MS.gene08754:CDS |
| TTCAAGTACGCGATGATCAA+TGG | 0.502893 | 4.2:-44684705 | MS.gene08754:CDS |
| CTGGTGAAGATTTGCACCTC+AGG | 0.503101 | 4.2:-44686017 | MS.gene08754:intron |
| ATCTGGCTACATAACACAAT+GGG | 0.506007 | 4.2:-44684668 | MS.gene08754:CDS |
| CGAAATTCGACGGCGAGAAG+TGG | 0.506078 | 4.2:-44687101 | MS.gene08754:CDS |
| TGTGTCTAAAGTTCTTTGGA+TGG | 0.510078 | 4.2:-44684218 | MS.gene08754:CDS |
| CCAAATTTGATGAAAAGGTA+GGG | 0.511666 | 4.2:+44686500 | None:intergenic |
| GCATACATTGTTGTCTCTGG+TGG | 0.511913 | 4.2:-44684535 | MS.gene08754:CDS |
| CATCAATTACCTTGTAGTTG+GGG | 0.519801 | 4.2:-44683234 | MS.gene08754:CDS |
| TCATTCTCACAAACAAGAGA+TGG | 0.521795 | 4.2:+44686771 | None:intergenic |
| TGCTGGTGCTAAGTTGGGAC+AGG | 0.530192 | 4.2:-44682809 | MS.gene08754:CDS |
| CCCAAATTTGATGAAAAGGT+AGG | 0.530743 | 4.2:+44686499 | None:intergenic |
| AACTACAAGGTAATTGATGA+AGG | 0.532933 | 4.2:+44683238 | None:intergenic |
| ATCTCCTAGATAGTAGGCAT+TGG | 0.534319 | 4.2:+44683644 | None:intergenic |
| CTAAAATCATCCTTCAACAA+TGG | 0.535382 | 4.2:+44682925 | None:intergenic |
| AGCTTTCCACGATTCTCTTG+AGG | 0.537297 | 4.2:+44686445 | None:intergenic |
| GCAGTGTATTCTAGTTTGAA+GGG | 0.542949 | 4.2:-44684373 | MS.gene08754:CDS |
| TTGATTTCGGAATTTGAACC+GGG | 0.544807 | 4.2:+44683133 | None:intergenic |
| TATGTGCACCTGGTTCCATA+TGG | 0.547518 | 4.2:+44682998 | None:intergenic |
| TATTGATGTTAATGTGAGAA+AGG | 0.547988 | 4.2:-44684305 | MS.gene08754:CDS |
| GCTGCTGCAGCTTGTTCACA+AGG | 0.548041 | 4.2:+44684502 | None:intergenic |
| CTGCTCTTATGAGTCCACCT+TGG | 0.549152 | 4.2:+44683511 | None:intergenic |
| CAAATCTTCACCAGTTGAGA+AGG | 0.549226 | 4.2:+44686026 | None:intergenic |
| TAAGAGCAGTAAGTGAAAGT+TGG | 0.549354 | 4.2:-44683497 | MS.gene08754:CDS |
| GATGGTAATCTTGAAGCTGA+AGG | 0.550276 | 4.2:+44682877 | None:intergenic |
| TCTCAAGAATTGCACAACAA+TGG | 0.551342 | 4.2:-44686896 | MS.gene08754:CDS |
| TCTTGGTGTGTATAGGGAGA+TGG | 0.554912 | 4.2:+44683338 | None:intergenic |
| TCAATAGTGATATCATAAGC+AGG | 0.556245 | 4.2:+44686135 | None:intergenic |
| GTCATTCAACATTCCATCCA+AGG | 0.556417 | 4.2:+44687073 | None:intergenic |
| GTTCTGGGAGAGAAACTTGA+GGG | 0.559430 | 4.2:+44683367 | None:intergenic |
| AACACTGCTCCCCAACTACA+AGG | 0.561032 | 4.2:+44683225 | None:intergenic |
| TTGATATGATGTATTTAAGA+GGG | 0.562184 | 4.2:-44683071 | MS.gene08754:CDS |
| TCCAAAAGACAAAGAAACAT+GGG | 0.566745 | 4.2:-44684788 | MS.gene08754:CDS |
| TGATTGAAAAGGTTCAAAGA+TGG | 0.566992 | 4.2:+44682859 | None:intergenic |
| AGAAGTGGAGATTCCTTGGA+TGG | 0.567533 | 4.2:-44687086 | MS.gene08754:CDS |
| GATACCTGGAAAGAAAATGT+TGG | 0.567656 | 4.2:-44686307 | MS.gene08754:CDS |
| CGAAATCAAGAACAAATGGT+TGG | 0.570974 | 4.2:-44683119 | MS.gene08754:CDS |
| AAATCCAAATGGGATTTGAA+AGG | 0.575214 | 4.2:-44686615 | MS.gene08754:CDS |
| AATTTAAGTCTAAAGAAGCT+GGG | 0.576519 | 4.2:-44686173 | MS.gene08754:CDS |
| GTTGATGATGATATGATACC+TGG | 0.577017 | 4.2:-44686321 | MS.gene08754:CDS |
| TAATTCAAATGGGACTACAT+TGG | 0.578547 | 4.2:-44684260 | MS.gene08754:CDS |
| TGGAAAGCTATAACGATTCG+CGG | 0.583596 | 4.2:-44686431 | MS.gene08754:CDS |
| TCAACTAACCATATGGAACC+AGG | 0.589500 | 4.2:-44683006 | MS.gene08754:CDS |
| TTTATGTTTACATGAACATG+AGG | 0.594622 | 4.2:-44683179 | MS.gene08754:CDS |
| AATTCCAATCACTTTCAACA+TGG | 0.597469 | 4.2:-44683619 | MS.gene08754:CDS |
| AGTTCTGGGAGAGAAACTTG+AGG | 0.603063 | 4.2:+44683366 | None:intergenic |
| ATCCAAAAGACAAAGAAACA+TGG | 0.611454 | 4.2:-44684789 | MS.gene08754:CDS |
| CAGAATCTTGAGCAGTGATG+AGG | 0.612938 | 4.2:+44682727 | None:intergenic |
| CCACAGTAATTACAACACTT+GGG | 0.613515 | 4.2:+44684332 | None:intergenic |
| TTAGCACTAATATGTGCACC+TGG | 0.615984 | 4.2:+44682988 | None:intergenic |
| TGCCTCAGAGTTCGACACCC+CGG | 0.617245 | 4.2:+44684408 | None:intergenic |
| ACTTTAGACACAAAAGCCCT+AGG | 0.620619 | 4.2:+44684229 | None:intergenic |
| TGGTAATGTCCTACAATGTG+TGG | 0.620729 | 4.2:+44686855 | None:intergenic |
| GGTTCATTTGAATGGCCACA+TGG | 0.621803 | 4.2:-44683561 | MS.gene08754:CDS |
| AGGTGTTGGTTCAATTTCCG+GGG | 0.621941 | 4.2:-44684425 | MS.gene08754:CDS |
| TATTAGTGCTAAAGATAATG+TGG | 0.629617 | 4.2:-44682977 | MS.gene08754:CDS |
| TTCGTTCAGGAGTCCAAACG+AGG | 0.632416 | 4.2:-44686472 | MS.gene08754:CDS |
| CATCTGGCTACATAACACAA+TGG | 0.632893 | 4.2:-44684669 | MS.gene08754:CDS |
| CAACATCATAACCCAAAACA+GGG | 0.633195 | 4.2:-44683700 | MS.gene08754:CDS |
| CTAAGAAGAAGAATCATCCA+AGG | 0.647301 | 4.2:-44683528 | MS.gene08754:CDS |
| AAGTACGCGATGATCAATGG+TGG | 0.648183 | 4.2:-44684702 | MS.gene08754:CDS |
| ACAGGGTAAATTCACTAACA+AGG | 0.650361 | 4.2:-44683683 | MS.gene08754:CDS |
| GGCGTCCCTCAAGAGAATCG+TGG | 0.659434 | 4.2:-44686451 | MS.gene08754:CDS |
| AGAAGAAGAATCATCCAAGG+TGG | 0.677908 | 4.2:-44683525 | MS.gene08754:CDS |
| CCCAAGTGTTGTAATTACTG+TGG | 0.680116 | 4.2:-44684332 | MS.gene08754:CDS |
| TTCCGGGGTGTCGAACTCTG+AGG | 0.689190 | 4.2:-44684410 | MS.gene08754:CDS |
| CCAAAAGACAAAGAAACATG+GGG | 0.703653 | 4.2:-44684787 | MS.gene08754:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAATAAAATTATT+GGG | + | chr4.2:44683982-44684001 | None:intergenic | 0.0% |
| !! | TATATATAAAATAAAATTAT+TGG | + | chr4.2:44683983-44684002 | None:intergenic | 0.0% |
| !!! | AATGATATATAACTAAATTT+TGG | - | chr4.2:44685730-44685749 | MS.gene08754:intron | 10.0% |
| !!! | AGATTTTCTATATTAAAATA+AGG | + | chr4.2:44684433-44684452 | None:intergenic | 10.0% |
| !! | TCATAAAATAAAATTGCATA+TGG | + | chr4.2:44684006-44684025 | None:intergenic | 15.0% |
| !!! | ACATAAATGACATATTTTTT+TGG | + | chr4.2:44684050-44684069 | None:intergenic | 15.0% |
| !!! | CTATTAGATTATGTTTTAAT+CGG | + | chr4.2:44685982-44686001 | None:intergenic | 15.0% |
| !!! | TTTATTCAATTTTCATATGA+AGG | - | chr4.2:44684698-44684717 | MS.gene08754:CDS | 15.0% |
| !! | AAAAAATAGACTTTCTTACT+TGG | + | chr4.2:44685670-44685689 | None:intergenic | 20.0% |
| !! | ACACATGTAAAAATTATTAC+TGG | + | chr4.2:44684890-44684909 | None:intergenic | 20.0% |
| !! | ATCATATAATGATCTAACAA+TGG | - | chr4.2:44685766-44685785 | MS.gene08754:intron | 20.0% |
| !! | ATTGATATGATGTATTTAAG+AGG | - | chr4.2:44686767-44686786 | MS.gene08754:CDS | 20.0% |
| !! | TCAAAATAGTAAGTTTGTAT+CGG | + | chr4.2:44684371-44684390 | None:intergenic | 20.0% |
| !! | TTGATATGATGTATTTAAGA+GGG | - | chr4.2:44686768-44686787 | MS.gene08754:CDS | 20.0% |
| !!! | AAAGTATAAGAATTCTGTTT+TGG | - | chr4.2:44683583-44683602 | MS.gene08754:CDS | 20.0% |
| !!! | AACATTTTTATTGTACTACA+TGG | - | chr4.2:44682887-44682906 | MS.gene08754:CDS | 20.0% |
| !!! | AAGTATAAGAATTCTGTTTT+GGG | - | chr4.2:44683584-44683603 | MS.gene08754:CDS | 20.0% |
| !!! | ACATTTTTATTGTACTACAT+GGG | - | chr4.2:44682888-44682907 | MS.gene08754:CDS | 20.0% |
| !!! | ATTTTACTTTTCCAAGTTAT+AGG | - | chr4.2:44683642-44683661 | MS.gene08754:CDS | 20.0% |
| !!! | GTAATAATTTTTACATGTGT+TGG | - | chr4.2:44684890-44684909 | MS.gene08754:intron | 20.0% |
| !!! | TTCAACAAAACATTGATTTT+CGG | + | chr4.2:44683266-44683285 | None:intergenic | 20.0% |
| ! | AAATAAGTCATTGTTTGACT+TGG | + | chr4.2:44684541-44684560 | None:intergenic | 25.0% |
| ! | AAATTTAAGTCTAAAGAAGC+TGG | - | chr4.2:44683665-44683684 | MS.gene08754:CDS | 25.0% |
| ! | AAGTCAAACAATGACTTATT+TGG | - | chr4.2:44684540-44684559 | MS.gene08754:CDS | 25.0% |
| ! | AATGAACATGAAATCCAAAT+GGG | - | chr4.2:44683214-44683233 | MS.gene08754:CDS | 25.0% |
| ! | AATTTAAGTCTAAAGAAGCT+GGG | - | chr4.2:44683666-44683685 | MS.gene08754:CDS | 25.0% |
| ! | AATTTCCAAAACAAAACCAT+TGG | - | chr4.2:44683170-44683189 | MS.gene08754:CDS | 25.0% |
| ! | CTTCAGAAACTAATTCAAAT+GGG | - | chr4.2:44685569-44685588 | MS.gene08754:intron | 25.0% |
| ! | GACAAAAGGTCAAATATAAA+GGG | - | chr4.2:44684073-44684092 | MS.gene08754:intron | 25.0% |
| ! | GACTTAAATTTCCTATAACT+TGG | + | chr4.2:44683656-44683675 | None:intergenic | 25.0% |
| ! | TAATGAACATGAAATCCAAA+TGG | - | chr4.2:44683213-44683232 | MS.gene08754:CDS | 25.0% |
| ! | TATTAGTGCTAAAGATAATG+TGG | - | chr4.2:44686862-44686881 | MS.gene08754:CDS | 25.0% |
| ! | TATTGATGTTAATGTGAGAA+AGG | - | chr4.2:44685534-44685553 | MS.gene08754:intron | 25.0% |
| ! | TGACAAAAGGTCAAATATAA+AGG | - | chr4.2:44684072-44684091 | MS.gene08754:intron | 25.0% |
| ! | TGTGGTTAAGCATAATAAAA+TGG | - | chr4.2:44686880-44686899 | MS.gene08754:CDS | 25.0% |
| ! | TTTATGTTTACATGAACATG+AGG | - | chr4.2:44686660-44686679 | MS.gene08754:CDS | 25.0% |
| ! | TTTCACTACATTAAAGTAAG+TGG | + | chr4.2:44684476-44684495 | None:intergenic | 25.0% |
| !! | AAAGAAAATGTTGGAGATTT+TGG | - | chr4.2:44683541-44683560 | MS.gene08754:CDS | 25.0% |
| !! | GTAAAATCCTTTTGTCTAAA+TGG | + | chr4.2:44683629-44683648 | None:intergenic | 25.0% |
| !! | TTGGTTCTTAAATCAATTGA+AGG | + | chr4.2:44682915-44682934 | None:intergenic | 25.0% |
| !!! | AAAGTGTTTTTCTCTTGAAA+TGG | + | chr4.2:44683289-44683308 | None:intergenic | 25.0% |
| !!! | AAATGAACCTACTAGTTTTA+TGG | + | chr4.2:44686267-44686286 | None:intergenic | 25.0% |
| !!! | AACTAAATTTTGGCTCATAT+AGG | - | chr4.2:44685740-44685759 | MS.gene08754:intron | 25.0% |
| !!! | AAGTTTTTCAACTAACCATA+TGG | - | chr4.2:44686826-44686845 | MS.gene08754:CDS | 25.0% |
| !!! | AGTTACGATTTTAAGTACTA+TGG | - | chr4.2:44683449-44683468 | MS.gene08754:CDS | 25.0% |
| !!! | GAGTTTGATTTTTATGTCAT+AGG | - | chr4.2:44683942-44683961 | MS.gene08754:intron | 25.0% |
| !!! | GCATAATAAAATGGATTTTG+AGG | - | chr4.2:44686889-44686908 | MS.gene08754:CDS | 25.0% |
| !!! | TAAGTCAATGTTTTAAAGAC+CGG | - | chr4.2:44685791-44685810 | MS.gene08754:intron | 25.0% |
| !!! | TTGATTTTCTTTCAAGTTCT+TGG | - | chr4.2:44683741-44683760 | MS.gene08754:intron | 25.0% |
| AAAACTCTCTCCAATGTTTA+GGG | + | chr4.2:44686643-44686662 | None:intergenic | 30.0% | |
| AAATCATGGAAGTTTAACCT+AGG | - | chr4.2:44686033-44686052 | MS.gene08754:CDS | 30.0% | |
| AAATCCAAATGGGATTTGAA+AGG | - | chr4.2:44683224-44683243 | MS.gene08754:CDS | 30.0% | |
| AACTACAAGGTAATTGATGA+AGG | + | chr4.2:44686604-44686623 | None:intergenic | 30.0% | |
| AACTAGTAGGTTCATTTGAA+TGG | - | chr4.2:44686270-44686289 | MS.gene08754:CDS | 30.0% | |
| AATTCCAATCACTTTCAACA+TGG | - | chr4.2:44686220-44686239 | MS.gene08754:CDS | 30.0% | |
| AATTCTTGAGAAATCTGGTT+TGG | + | chr4.2:44682934-44682953 | None:intergenic | 30.0% | |
| AATTTCATCTCCTAGATAGT+AGG | + | chr4.2:44686204-44686223 | None:intergenic | 30.0% | |
| AGTTTCACTAATTCAATCTC+CGG | - | chr4.2:44686000-44686019 | MS.gene08754:intron | 30.0% | |
| ATCCAAAAGACAAAGAAACA+TGG | - | chr4.2:44685050-44685069 | MS.gene08754:intron | 30.0% | |
| CACTATTGATAAAATTGTGC+AGG | - | chr4.2:44683718-44683737 | MS.gene08754:CDS | 30.0% | |
| CCAAATTTGATGAAAAGGTA+GGG | + | chr4.2:44683342-44683361 | None:intergenic | 30.0% | |
| CTAAAATCATCCTTCAACAA+TGG | + | chr4.2:44686917-44686936 | None:intergenic | 30.0% | |
| GATCAAACCAATTGACAAAT+TGG | + | chr4.2:44685833-44685852 | None:intergenic | 30.0% | |
| GCTTCAGAAACTAATTCAAA+TGG | - | chr4.2:44685568-44685587 | MS.gene08754:intron | 30.0% | |
| GTCATTTATGTAGTGACAAA+AGG | - | chr4.2:44684059-44684078 | MS.gene08754:intron | 30.0% | |
| GTTTGTTTGATTGCAAATAG+AGG | + | chr4.2:44684741-44684760 | None:intergenic | 30.0% | |
| TAAAACTCTCTCCAATGTTT+AGG | + | chr4.2:44686644-44686663 | None:intergenic | 30.0% | |
| TAATTCAAATGGGACTACAT+TGG | - | chr4.2:44685579-44685598 | MS.gene08754:intron | 30.0% | |
| TCAATAGTGATATCATAAGC+AGG | + | chr4.2:44683707-44683726 | None:intergenic | 30.0% | |
| TCATCAATTACCTTGTAGTT+GGG | - | chr4.2:44686604-44686623 | MS.gene08754:CDS | 30.0% | |
| TCCAAAAGACAAAGAAACAT+GGG | - | chr4.2:44685051-44685070 | MS.gene08754:intron | 30.0% | |
| TGATTGAAAAGGTTCAAAGA+TGG | + | chr4.2:44686983-44687002 | None:intergenic | 30.0% | |
| TTCATCAATTACCTTGTAGT+TGG | - | chr4.2:44686603-44686622 | MS.gene08754:CDS | 30.0% | |
| TTGACAACTTCAACAATTCT+TGG | + | chr4.2:44686521-44686540 | None:intergenic | 30.0% | |
| TTGATCCATAGGTAGTAATA+AGG | + | chr4.2:44686425-44686444 | None:intergenic | 30.0% | |
| TTTGGTTATTGTTGTCTTCT+TGG | + | chr4.2:44683031-44683050 | None:intergenic | 30.0% | |
| ! | AACAATTCTTGGTGTGTATA+GGG | + | chr4.2:44686510-44686529 | None:intergenic | 30.0% |
| ! | AAGATCTTTGATTTAGGTGT+TGG | - | chr4.2:44685400-44685419 | MS.gene08754:intron | 30.0% |
| ! | CATTGTTGAAGGATGATTTT+AGG | - | chr4.2:44686915-44686934 | MS.gene08754:CDS | 30.0% |
| ! | CCTACCTTTTCATCAAATTT+GGG | - | chr4.2:44683340-44683359 | MS.gene08754:CDS | 30.0% |
| ! | CGGTTTAAGATCTTTGATTT+AGG | - | chr4.2:44685394-44685413 | MS.gene08754:intron | 30.0% |
| ! | CTTCAAAAGTATAGAAATGC+AGG | - | chr4.2:44685007-44685026 | MS.gene08754:intron | 30.0% |
| ! | GAATTGTTGTTGCTTGAATT+TGG | + | chr4.2:44683049-44683068 | None:intergenic | 30.0% |
| ! | GATATTGCCATTTAGACAAA+AGG | - | chr4.2:44683619-44683638 | MS.gene08754:CDS | 30.0% |
| ! | TACAATTTTCTCTTGCAGAT+TGG | - | chr4.2:44686096-44686115 | MS.gene08754:CDS | 30.0% |
| ! | TAGTGAATTTACCCTGTTTT+GGG | + | chr4.2:44686153-44686172 | None:intergenic | 30.0% |
| ! | TTAGTGAATTTACCCTGTTT+TGG | + | chr4.2:44686154-44686173 | None:intergenic | 30.0% |
| !! | AATCAAGCTGTTTCTCTTAA+GGG | - | chr4.2:44686998-44687017 | MS.gene08754:CDS | 30.0% |
| !! | ACGATTTTAAGTACTATGGA+AGG | - | chr4.2:44683453-44683472 | MS.gene08754:CDS | 30.0% |
| !! | ATTTTCGGTTTGTTTGGATT+TGG | + | chr4.2:44683251-44683270 | None:intergenic | 30.0% |
| !! | CTTTGGAATTCTGATTTCAA+AGG | + | chr4.2:44684623-44684642 | None:intergenic | 30.0% |
| !! | CTTTTGTGTCTAAAGTTCTT+TGG | - | chr4.2:44685617-44685636 | MS.gene08754:intron | 30.0% |
| !! | GATTTTAGGAATTTTTTGCC+TGG | - | chr4.2:44686929-44686948 | MS.gene08754:CDS | 30.0% |
| !! | TACTGTTGTTTCTGATACAT+AGG | + | chr4.2:44685098-44685117 | None:intergenic | 30.0% |
| !! | TTTTAAAGACCGGTTAAATC+AGG | - | chr4.2:44685801-44685820 | MS.gene08754:intron | 30.0% |
| !!! | AAGAGTGCATCAATTTTTTG+AGG | + | chr4.2:44685208-44685227 | None:intergenic | 30.0% |
| !!! | AATTCTGTTTTGGGAAGTAT+TGG | - | chr4.2:44683593-44683612 | MS.gene08754:CDS | 30.0% |
| !!! | ACATTGATTTTCGGTTTGTT+TGG | + | chr4.2:44683257-44683276 | None:intergenic | 30.0% |
| !!! | AGAGTGCATCAATTTTTTGA+GGG | + | chr4.2:44685207-44685226 | None:intergenic | 30.0% |
| !!! | ATTCTGTTTTGGGAAGTATT+GGG | - | chr4.2:44683594-44683613 | MS.gene08754:CDS | 30.0% |
| AAAACCAAGCCTCAAAAATC+AGG | - | chr4.2:44682807-44682826 | MS.gene08754:CDS | 35.0% | |
| AAAGCATACATTGTTGTCTC+TGG | - | chr4.2:44685301-44685320 | MS.gene08754:intron | 35.0% | |
| AAATTATTGGGGTTCATGCA+TGG | + | chr4.2:44683970-44683989 | None:intergenic | 35.0% | |
| AACTATTGTGCATTACTCCT+AGG | + | chr4.2:44686053-44686072 | None:intergenic | 35.0% | |
| ACAGGGTAAATTCACTAACA+AGG | - | chr4.2:44686156-44686175 | MS.gene08754:CDS | 35.0% | |
| AGACAATATGATTGTACCTG+AGG | + | chr4.2:44683841-44683860 | None:intergenic | 35.0% | |
| AGCACCCAAATTTGATGAAA+AGG | + | chr4.2:44683347-44683366 | None:intergenic | 35.0% | |
| ATCTGGCTACATAACACAAT+GGG | - | chr4.2:44685171-44685190 | MS.gene08754:intron | 35.0% | |
| ATGTTGAATGACTATGTTGC+TGG | - | chr4.2:44682777-44682796 | MS.gene08754:CDS | 35.0% | |
| CAACATCATAACCCAAAACA+GGG | - | chr4.2:44686139-44686158 | MS.gene08754:CDS | 35.0% | |
| CAAGGTAATTGATGAAGGTA+AGG | + | chr4.2:44686599-44686618 | None:intergenic | 35.0% | |
| CACCACTTCTTGAAAAATTC+AGG | - | chr4.2:44685263-44685282 | MS.gene08754:intron | 35.0% | |
| CATCAATTACCTTGTAGTTG+GGG | - | chr4.2:44686605-44686624 | MS.gene08754:CDS | 35.0% | |
| CCAAAAGACAAAGAAACATG+GGG | - | chr4.2:44685052-44685071 | MS.gene08754:intron | 35.0% | |
| CCAAAATTGTCATCTGAAGA+TGG | + | chr4.2:44686371-44686390 | None:intergenic | 35.0% | |
| CCACAGTAATTACAACACTT+GGG | + | chr4.2:44685510-44685529 | None:intergenic | 35.0% | |
| CCCAAATTTGATGAAAAGGT+AGG | + | chr4.2:44683343-44683362 | None:intergenic | 35.0% | |
| CGGTTTAATCTGTTTAATCG+TGG | + | chr4.2:44685962-44685981 | None:intergenic | 35.0% | |
| CTAAGAAGAAGAATCATCCA+AGG | - | chr4.2:44686311-44686330 | MS.gene08754:CDS | 35.0% | |
| CTATCCATGTTGAAAGTGAT+TGG | + | chr4.2:44686227-44686246 | None:intergenic | 35.0% | |
| GAACAAGCCAATTTGTCAAT+TGG | - | chr4.2:44685823-44685842 | MS.gene08754:intron | 35.0% | |
| GAAGCAACCATAAAACTAGT+AGG | - | chr4.2:44686257-44686276 | MS.gene08754:CDS | 35.0% | |
| GAATACACTGCTTGTATAAC+TGG | + | chr4.2:44685457-44685476 | None:intergenic | 35.0% | |
| GACACTAGAGAAAAAGTCTT+TGG | + | chr4.2:44684640-44684659 | None:intergenic | 35.0% | |
| GAGAAACAGCTTGATTGAAA+AGG | + | chr4.2:44686994-44687013 | None:intergenic | 35.0% | |
| GATACCTGGAAAGAAAATGT+TGG | - | chr4.2:44683532-44683551 | MS.gene08754:CDS | 35.0% | |
| GTACTATGGAAGGTTTCAAA+TGG | - | chr4.2:44683463-44683482 | MS.gene08754:CDS | 35.0% | |
| TAAGAGCAGTAAGTGAAAGT+TGG | - | chr4.2:44686342-44686361 | MS.gene08754:CDS | 35.0% | |
| TATTCTGTCGCATTCCATTT+CGG | + | chr4.2:44686551-44686570 | None:intergenic | 35.0% | |
| TCAACATCATAACCCAAAAC+AGG | - | chr4.2:44686138-44686157 | MS.gene08754:CDS | 35.0% | |
| TCATTCTCACAAACAAGAGA+TGG | + | chr4.2:44683071-44683090 | None:intergenic | 35.0% | |
| TCCACAGTAATTACAACACT+TGG | + | chr4.2:44685511-44685530 | None:intergenic | 35.0% | |
| TCTCAAGAATTGCACAACAA+TGG | - | chr4.2:44682943-44682962 | MS.gene08754:CDS | 35.0% | |
| TCTCACCTTATTACTACCTA+TGG | - | chr4.2:44686417-44686436 | MS.gene08754:CDS | 35.0% | |
| TGAAGATGCTAAGAAAAACC+CGG | - | chr4.2:44686688-44686707 | MS.gene08754:CDS | 35.0% | |
| TGAGTGCATATTTGATCCAT+AGG | + | chr4.2:44686436-44686455 | None:intergenic | 35.0% | |
| TGTGCAATTCTTGAGAAATC+TGG | + | chr4.2:44682939-44682958 | None:intergenic | 35.0% | |
| TTGTCAAAGAAAGACCGAAA+TGG | - | chr4.2:44686534-44686553 | MS.gene08754:CDS | 35.0% | |
| TTTGCAAACAGAAGCTGATT+TGG | - | chr4.2:44683487-44683506 | MS.gene08754:CDS | 35.0% | |
| ! | AAAGAGAGAGCTTTATGAAG+AGG | - | chr4.2:44683142-44683161 | MS.gene08754:CDS | 35.0% |
| ! | ACAAGTGTTTCTGAACCTAA+TGG | + | chr4.2:44684583-44684602 | None:intergenic | 35.0% |
| ! | ATCTCCAACATTTTCTTTCC+AGG | + | chr4.2:44683539-44683558 | None:intergenic | 35.0% |
| ! | CAACAATTCTTGGTGTGTAT+AGG | + | chr4.2:44686511-44686530 | None:intergenic | 35.0% |
| ! | CAGTGTTTTTCCCTAAACAT+TGG | - | chr4.2:44686630-44686649 | MS.gene08754:CDS | 35.0% |
| ! | CCATCTTCAGATGACAATTT+TGG | - | chr4.2:44686368-44686387 | MS.gene08754:CDS | 35.0% |
| ! | CCCTACCTTTTCATCAAATT+TGG | - | chr4.2:44683339-44683358 | MS.gene08754:CDS | 35.0% |
| ! | GGTTAGTTGAAAAACTTGCT+TGG | + | chr4.2:44686823-44686842 | None:intergenic | 35.0% |
| ! | GTTGAAAAACTTGCTTGGTT+TGG | + | chr4.2:44686818-44686837 | None:intergenic | 35.0% |
| ! | TCTTTGTCTTTTGGATCTAC+TGG | + | chr4.2:44685046-44685065 | None:intergenic | 35.0% |
| ! | TGTGTCTAAAGTTCTTTGGA+TGG | - | chr4.2:44685621-44685640 | MS.gene08754:intron | 35.0% |
| !! | AAGTCATTGTTTGACTTGGA+TGG | + | chr4.2:44684537-44684556 | None:intergenic | 35.0% |
| !! | AGCAGTGTATTCTAGTTTGA+AGG | - | chr4.2:44685465-44685484 | MS.gene08754:intron | 35.0% |
| !! | CAATCAAGCTGTTTCTCTTA+AGG | - | chr4.2:44686997-44687016 | MS.gene08754:CDS | 35.0% |
| !! | CTTAGTGTTTTTGATCCATG+TGG | + | chr4.2:44686296-44686315 | None:intergenic | 35.0% |
| !! | CTTGCTTGGTTTGGAAAATT+TGG | + | chr4.2:44686809-44686828 | None:intergenic | 35.0% |
| !! | GAGTTTTAGTCGAAATTCGA+CGG | - | chr4.2:44682728-44682747 | MS.gene08754:CDS | 35.0% |
| !! | GCAGTGTATTCTAGTTTGAA+GGG | - | chr4.2:44685466-44685485 | MS.gene08754:intron | 35.0% |
| !! | GTTGATGATGATATGATACC+TGG | - | chr4.2:44683518-44683537 | MS.gene08754:CDS | 35.0% |
| !! | TTAGGTGTTGGTTCAATTTC+CGG | - | chr4.2:44685412-44685431 | MS.gene08754:intron | 35.0% |
| !! | TTTGTTGTGCCTGATTTTTG+AGG | + | chr4.2:44682819-44682838 | None:intergenic | 35.0% |
| !!! | CAGTTCCAATGGTTTTGTTT+TGG | + | chr4.2:44683178-44683197 | None:intergenic | 35.0% |
| !!! | GACCTGAATTTTTCAAGAAG+TGG | + | chr4.2:44685268-44685287 | None:intergenic | 35.0% |
| !!! | TACATTGGTTCTTTTGCCTA+GGG | - | chr4.2:44685594-44685613 | MS.gene08754:intron | 35.0% |
| !!! | TGATTTTTGAGGCTTGGTTT+TGG | + | chr4.2:44682808-44682827 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGCAAAGAACGA+CGG | - | chr4.2:44685374-44685393 | MS.gene08754:intron | 35.0% |
| AAATTTGGGTGCTTTCGTTC+AGG | - | chr4.2:44683354-44683373 | MS.gene08754:CDS | 40.0% | |
| AACTTGAACCGGTTAAACCA+AGG | - | chr4.2:44685896-44685915 | MS.gene08754:intron | 40.0% | |
| AATCCGATCAAACGTGTTTC+TGG | + | chr4.2:44684950-44684969 | None:intergenic | 40.0% | |
| ACACCAGAAACACGTTTGAT+CGG | - | chr4.2:44684944-44684963 | MS.gene08754:intron | 40.0% | |
| ACTCTGCAGTCCAGTTAAAT+CGG | - | chr4.2:44685859-44685878 | MS.gene08754:intron | 40.0% | |
| ACTTTAGACACAAAAGCCCT+AGG | + | chr4.2:44685613-44685632 | None:intergenic | 40.0% | |
| AGAAGAAGAATCATCCAAGG+TGG | - | chr4.2:44686314-44686333 | MS.gene08754:CDS | 40.0% | |
| ATCTCCTAGATAGTAGGCAT+TGG | + | chr4.2:44686198-44686217 | None:intergenic | 40.0% | |
| ATGATCACACCACACATTGT+AGG | - | chr4.2:44682975-44682994 | MS.gene08754:CDS | 40.0% | |
| CAAATCTTCACCAGTTGAGA+AGG | + | chr4.2:44683816-44683835 | None:intergenic | 40.0% | |
| CAGTTAAATCGGACTGAACA+AGG | - | chr4.2:44685870-44685889 | MS.gene08754:intron | 40.0% | |
| CATCTGGCTACATAACACAA+TGG | - | chr4.2:44685170-44685189 | MS.gene08754:intron | 40.0% | |
| CCATGATTTGAAAGTCGAAC+CGG | + | chr4.2:44686022-44686041 | None:intergenic | 40.0% | |
| CGTTCTTTGCAAACCAAAAG+AGG | + | chr4.2:44685373-44685392 | None:intergenic | 40.0% | |
| CTTGTTCAGTCCGATTTAAC+TGG | + | chr4.2:44685872-44685891 | None:intergenic | 40.0% | |
| GAAAAATTCAGGTCCACAGT+TGG | - | chr4.2:44685274-44685293 | MS.gene08754:intron | 40.0% | |
| GAACAAGGTTGAACTTGAAC+CGG | - | chr4.2:44685885-44685904 | MS.gene08754:intron | 40.0% | |
| GAGAAACTTGAGGGTCATAA+TGG | + | chr4.2:44686466-44686485 | None:intergenic | 40.0% | |
| GATGGTAATCTTGAAGCTGA+AGG | + | chr4.2:44686965-44686984 | None:intergenic | 40.0% | |
| GGTTGAACGCTAAAACTTGT+CGG | - | chr4.2:44684921-44684940 | MS.gene08754:intron | 40.0% | |
| GTCATTCAACATTCCATCCA+AGG | + | chr4.2:44682769-44682788 | None:intergenic | 40.0% | |
| GTGATATCATAAGCAGGATC+AGG | + | chr4.2:44683701-44683720 | None:intergenic | 40.0% | |
| TCAACTAACCATATGGAACC+AGG | - | chr4.2:44686833-44686852 | MS.gene08754:CDS | 40.0% | |
| TCACCAGTTGAGAAGGTAAA+AGG | + | chr4.2:44683809-44683828 | None:intergenic | 40.0% | |
| TGAACCAACCTTGGTTTAAC+CGG | + | chr4.2:44685907-44685926 | None:intergenic | 40.0% | |
| TGATGAAGGTAAGGTGTGTT+TGG | + | chr4.2:44686590-44686609 | None:intergenic | 40.0% | |
| TGGAAAGCTATAACGATTCG+CGG | - | chr4.2:44683408-44683427 | MS.gene08754:CDS | 40.0% | |
| TGGACCTTTCAAATCCCATT+TGG | + | chr4.2:44683231-44683250 | None:intergenic | 40.0% | |
| TGTGAATGCAGTATCTTGTC+CGG | + | chr4.2:44684859-44684878 | None:intergenic | 40.0% | |
| TTAAACCCTGTCACAAACAC+CGG | - | chr4.2:44684837-44684856 | MS.gene08754:CDS | 40.0% | |
| TTAGCACTAATATGTGCACC+TGG | + | chr4.2:44686854-44686873 | None:intergenic | 40.0% | |
| TTCAAGTACGCGATGATCAA+TGG | - | chr4.2:44685134-44685153 | MS.gene08754:intron | 40.0% | |
| ! | ACTCCTTTTACCTTCTCAAC+TGG | - | chr4.2:44683803-44683822 | MS.gene08754:intron | 40.0% |
| ! | CCCAAGTGTTGTAATTACTG+TGG | - | chr4.2:44685507-44685526 | MS.gene08754:intron | 40.0% |
| ! | CCCCATGTTTCTTTGTCTTT+TGG | + | chr4.2:44685055-44685074 | None:intergenic | 40.0% |
| ! | GTTGCTGTTGATCATCATAC+TGG | - | chr4.2:44687085-44687104 | MS.gene08754:CDS | 40.0% |
| ! | TAAACCAAGGTTGGTTCAAC+TGG | - | chr4.2:44685909-44685928 | MS.gene08754:intron | 40.0% |
| ! | TGGTAATGTCCTACAATGTG+TGG | + | chr4.2:44682987-44683006 | None:intergenic | 40.0% |
| ! | TTACATGTGTTGGTGCACTA+GGG | - | chr4.2:44684900-44684919 | MS.gene08754:intron | 40.0% |
| ! | TTGAAGTGTCTCAGTTCCAA+TGG | + | chr4.2:44683189-44683208 | None:intergenic | 40.0% |
| ! | TTTACATGTGTTGGTGCACT+AGG | - | chr4.2:44684899-44684918 | MS.gene08754:intron | 40.0% |
| !! | AGATTTTGGCACATGTAGCT+GGG | - | chr4.2:44683555-44683574 | MS.gene08754:CDS | 40.0% |
| !! | TAGGTGTTGGTTCAATTTCC+GGG | - | chr4.2:44685413-44685432 | MS.gene08754:intron | 40.0% |
| !! | TGGCTTGTTCCTGATTTAAC+CGG | + | chr4.2:44685813-44685832 | None:intergenic | 40.0% |
| !! | TGTGAGAAAGGCTTTGAAGA+TGG | - | chr4.2:44685546-44685565 | MS.gene08754:intron | 40.0% |
| !!! | CTACATTGGTTCTTTTGCCT+AGG | - | chr4.2:44685593-44685612 | MS.gene08754:intron | 40.0% |
| !!! | GTATGCTTTTTTGCCAACTG+TGG | + | chr4.2:44685290-44685309 | None:intergenic | 40.0% |
| !!! | TTTTGAGGTGCCATTGTTGA+AGG | - | chr4.2:44686904-44686923 | MS.gene08754:CDS | 40.0% |
| AAGTACGCGATGATCAATGG+TGG | - | chr4.2:44685137-44685156 | MS.gene08754:intron | 45.0% | |
| AGAAGTGGAGATTCCTTGGA+TGG | - | chr4.2:44682753-44682772 | MS.gene08754:CDS | 45.0% | |
| AGCTTTCCACGATTCTCTTG+AGG | + | chr4.2:44683397-44683416 | None:intergenic | 45.0% | |
| CAAATGGTTGGCAAGCTTCA+TGG | - | chr4.2:44686732-44686751 | MS.gene08754:CDS | 45.0% | |
| CAGAATCTTGAGCAGTGATG+AGG | + | chr4.2:44687115-44687134 | None:intergenic | 45.0% | |
| CTCACCAATGCCTACTATCT+AGG | - | chr4.2:44686191-44686210 | MS.gene08754:CDS | 45.0% | |
| CTTAAGGGACTTAAAGCTGC+TGG | - | chr4.2:44687013-44687032 | MS.gene08754:CDS | 45.0% | |
| GAAACCAGTTGAACCAACCT+TGG | + | chr4.2:44685916-44685935 | None:intergenic | 45.0% | |
| GAAGGTAAGGTGTGTTTGGA+TGG | + | chr4.2:44686586-44686605 | None:intergenic | 45.0% | |
| GCATACATTGTTGTCTCTGG+TGG | - | chr4.2:44685304-44685323 | MS.gene08754:intron | 45.0% | |
| GCTTTCCACGATTCTCTTGA+GGG | + | chr4.2:44683396-44683415 | None:intergenic | 45.0% | |
| GGTTCATTTGAATGGCCACA+TGG | - | chr4.2:44686278-44686297 | MS.gene08754:CDS | 45.0% | |
| GTGCTCAACTAGTTGCCATT+AGG | - | chr4.2:44684565-44684584 | MS.gene08754:CDS | 45.0% | |
| TATGTGCACCTGGTTCCATA+TGG | + | chr4.2:44686844-44686863 | None:intergenic | 45.0% | |
| TGAACCGGTTAAACCAAGGT+TGG | - | chr4.2:44685900-44685919 | MS.gene08754:intron | 45.0% | |
| TGAGAGAAGATGCAGCTTCT+TGG | + | chr4.2:44683007-44683026 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTGGTGCTAAGTT+GGG | - | chr4.2:44687025-44687044 | MS.gene08754:CDS | 45.0% |
| ! | AGCTCTCAAATGGCCTCTTT+TGG | - | chr4.2:44685357-44685376 | MS.gene08754:intron | 45.0% |
| ! | CCGGTTCGACTTTCAAATCA+TGG | - | chr4.2:44686019-44686038 | MS.gene08754:CDS | 45.0% |
| ! | TAAAGCTGCTGGTGCTAAGT+TGG | - | chr4.2:44687024-44687043 | MS.gene08754:CDS | 45.0% |
| ! | TAACTGGACTGCAGAGTACT+CGG | + | chr4.2:44685856-44685875 | None:intergenic | 45.0% |
| ! | TCTTGGTGTGTATAGGGAGA+TGG | + | chr4.2:44686504-44686523 | None:intergenic | 45.0% |
| !! | AGGTGTTGGTTCAATTTCCG+GGG | - | chr4.2:44685414-44685433 | MS.gene08754:intron | 45.0% |
| !! | AGTTCTGGGAGAGAAACTTG+AGG | + | chr4.2:44686476-44686495 | None:intergenic | 45.0% |
| !! | GAGATTTTGGCACATGTAGC+TGG | - | chr4.2:44683554-44683573 | MS.gene08754:CDS | 45.0% |
| !! | GTTCTGGGAGAGAAACTTGA+GGG | + | chr4.2:44686475-44686494 | None:intergenic | 45.0% |
| !! | TGGTGGAAAGCACTTTCATC+TGG | - | chr4.2:44685154-44685173 | MS.gene08754:intron | 45.0% |
| !!! | CTGTTTTGGGAAGTATTGGG+AGG | - | chr4.2:44683597-44683616 | MS.gene08754:CDS | 45.0% |
| !!! | GCTGAAGGCATTTTCATTCC+AGG | + | chr4.2:44686950-44686969 | None:intergenic | 45.0% |
| !!! | TGTGCCTGATTTTTGAGGCT+TGG | + | chr4.2:44682814-44682833 | None:intergenic | 45.0% |
| !! | AATTATATATTATCATAAAA+TGG | + | chr4.2:44683904-44683923 | None:intergenic | 5.0% |
| !! | TATATAAAATAAAATTATTG+GGG | + | chr4.2:44683981-44684000 | None:intergenic | 5.0% |
| !!! | ATATAATTTTTAACAAAAAT+TGG | - | chr4.2:44683916-44683935 | MS.gene08754:intron | 5.0% |
| AACACTGCTCCCCAACTACA+AGG | + | chr4.2:44686617-44686636 | None:intergenic | 50.0% | |
| AAGCTGCAGCAGCTCTCAAA+TGG | - | chr4.2:44685347-44685366 | MS.gene08754:intron | 50.0% | |
| AGGGAGATGGAAGAGAGTTC+TGG | + | chr4.2:44686491-44686510 | None:intergenic | 50.0% | |
| CTGCTCTTATGAGTCCACCT+TGG | + | chr4.2:44686331-44686350 | None:intergenic | 50.0% | |
| CTGGTGAAGATTTGCACCTC+AGG | - | chr4.2:44683822-44683841 | MS.gene08754:intron | 50.0% | |
| CTTGTCCGGTGTTTGTGACA+GGG | + | chr4.2:44684845-44684864 | None:intergenic | 50.0% | |
| GGGAGATGGAAGAGAGTTCT+GGG | + | chr4.2:44686490-44686509 | None:intergenic | 50.0% | |
| TCTTGTCCGGTGTTTGTGAC+AGG | + | chr4.2:44684846-44684865 | None:intergenic | 50.0% | |
| TTCGTTCAGGAGTCCAAACG+AGG | - | chr4.2:44683367-44683386 | MS.gene08754:CDS | 50.0% | |
| ! | AACTGGACTGCAGAGTACTC+GGG | + | chr4.2:44685855-44685874 | None:intergenic | 50.0% |
| CGAAATTCGACGGCGAGAAG+TGG | - | chr4.2:44682738-44682757 | MS.gene08754:CDS | 55.0% | |
| GGCGAGAAGTGGAGATTCCT+TGG | - | chr4.2:44682749-44682768 | MS.gene08754:CDS | 55.0% | |
| ! | GCTGCTGCAGCTTGTTCACA+AGG | + | chr4.2:44685340-44685359 | None:intergenic | 55.0% |
| ! | TGCTGGTGCTAAGTTGGGAC+AGG | - | chr4.2:44687030-44687049 | MS.gene08754:CDS | 55.0% |
| CTCTTGAGGGACGCCTCGTT+TGG | + | chr4.2:44683383-44683402 | None:intergenic | 60.0% | |
| GGCGTCCCTCAAGAGAATCG+TGG | - | chr4.2:44683388-44683407 | MS.gene08754:CDS | 60.0% | |
| TGCCTCAGAGTTCGACACCC+CGG | + | chr4.2:44685434-44685453 | None:intergenic | 60.0% | |
| !! | TTCCGGGGTGTCGAACTCTG+AGG | - | chr4.2:44685429-44685448 | MS.gene08754:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 44682726 | 44687135 | 44682726 | ID=MS.gene08754 |
| chr4.2 | mRNA | 44682726 | 44687135 | 44682726 | ID=MS.gene08754.t1;Parent=MS.gene08754 |
| chr4.2 | exon | 44686018 | 44687135 | 44686018 | ID=MS.gene08754.t1.exon1;Parent=MS.gene08754.t1 |
| chr4.2 | CDS | 44686018 | 44687135 | 44686018 | ID=cds.MS.gene08754.t1;Parent=MS.gene08754.t1 |
| chr4.2 | exon | 44684191 | 44684861 | 44684191 | ID=MS.gene08754.t1.exon2;Parent=MS.gene08754.t1 |
| chr4.2 | CDS | 44684191 | 44684861 | 44684191 | ID=cds.MS.gene08754.t1;Parent=MS.gene08754.t1 |
| chr4.2 | exon | 44682726 | 44683747 | 44682726 | ID=MS.gene08754.t1.exon3;Parent=MS.gene08754.t1 |
| chr4.2 | CDS | 44682726 | 44683747 | 44682726 | ID=cds.MS.gene08754.t1;Parent=MS.gene08754.t1 |
| Gene Sequence |
| Protein sequence |
