Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21029.t1 | RHN80862.1 | 96.6 | 642 | 22 | 0 | 1 | 642 | 1 | 642 | 5.60E-242 | 847 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21029.t1 | Q86L99 | 38.2 | 76 | 39 | 2 | 155 | 223 | 348 | 422 | 4.8e-08 | 61.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21029.t1 | A0A396JTJ5 | 96.6 | 642 | 22 | 0 | 1 | 642 | 1 | 642 | 4.0e-242 | 847.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04985 | MS.gene21029 | 0.834022 | 3.81E-56 | -1.69E-46 |
MS.gene049989 | MS.gene21029 | 0.831085 | 2.04E-55 | -1.69E-46 |
MS.gene050297 | MS.gene21029 | 0.841526 | 4.50E-58 | -1.69E-46 |
MS.gene051263 | MS.gene21029 | 0.85454 | 1.15E-61 | -1.69E-46 |
MS.gene051478 | MS.gene21029 | 0.837382 | 5.37E-57 | -1.69E-46 |
MS.gene051629 | MS.gene21029 | 0.801447 | 8.97E-49 | -1.69E-46 |
MS.gene051648 | MS.gene21029 | 0.809225 | 2.10E-50 | -1.69E-46 |
MS.gene052367 | MS.gene21029 | 0.809632 | 1.72E-50 | -1.69E-46 |
MS.gene055957 | MS.gene21029 | 0.851478 | 8.64E-61 | -1.69E-46 |
MS.gene056041 | MS.gene21029 | 0.813694 | 2.25E-51 | -1.69E-46 |
MS.gene056335 | MS.gene21029 | 0.813223 | 2.85E-51 | -1.69E-46 |
MS.gene058818 | MS.gene21029 | 0.805428 | 1.34E-49 | -1.69E-46 |
MS.gene059300 | MS.gene21029 | 0.80633 | 8.67E-50 | -1.69E-46 |
MS.gene060473 | MS.gene21029 | 0.802011 | 6.87E-49 | -1.69E-46 |
MS.gene060565 | MS.gene21029 | 0.807338 | 5.31E-50 | -1.69E-46 |
MS.gene06057 | MS.gene21029 | 0.820007 | 8.61E-53 | -1.69E-46 |
MS.gene061260 | MS.gene21029 | 0.817001 | 4.13E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21029.t1 | MTR_1g084120 | 96.417 | 642 | 23 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1248 |
MS.gene21029.t1 | MTR_4g109680 | 36.482 | 307 | 178 | 9 | 22 | 314 | 19 | 322 | 1.20e-51 | 188 |
MS.gene21029.t1 | MTR_4g109680 | 32.283 | 254 | 158 | 7 | 72 | 315 | 19 | 268 | 1.80e-36 | 145 |
MS.gene21029.t1 | MTR_4g109680 | 32.000 | 225 | 143 | 5 | 15 | 232 | 65 | 286 | 4.66e-31 | 129 |
MS.gene21029.t1 | MTR_7g113200 | 34.122 | 296 | 179 | 9 | 15 | 303 | 174 | 460 | 2.10e-37 | 148 |
MS.gene21029.t1 | MTR_7g113200 | 30.622 | 209 | 133 | 6 | 11 | 212 | 276 | 479 | 1.20e-22 | 103 |
MS.gene21029.t1 | MTR_7g113200 | 35.018 | 277 | 166 | 8 | 15 | 284 | 174 | 443 | 2.57e-37 | 145 |
MS.gene21029.t1 | MTR_7g113200 | 30.583 | 206 | 131 | 6 | 11 | 209 | 276 | 476 | 5.76e-22 | 100 |
MS.gene21029.t1 | MTR_1g090740 | 30.124 | 322 | 202 | 10 | 15 | 318 | 15 | 331 | 1.12e-34 | 138 |
MS.gene21029.t1 | MTR_1g492850 | 29.766 | 299 | 186 | 7 | 22 | 299 | 14 | 309 | 4.57e-30 | 124 |
MS.gene21029.t1 | MTR_1g492850 | 31.203 | 266 | 162 | 6 | 14 | 260 | 57 | 320 | 9.48e-29 | 120 |
MS.gene21029.t1 | MTR_1g492850 | 32.927 | 246 | 146 | 8 | 71 | 301 | 13 | 254 | 5.33e-28 | 118 |
MS.gene21029.t1 | MTR_1g492850 | 32.367 | 207 | 130 | 4 | 122 | 321 | 14 | 217 | 4.02e-25 | 109 |
MS.gene21029.t1 | MTR_1g492850 | 29.766 | 299 | 186 | 7 | 22 | 299 | 14 | 309 | 5.05e-30 | 124 |
MS.gene21029.t1 | MTR_1g492850 | 31.203 | 266 | 162 | 6 | 14 | 260 | 57 | 320 | 1.01e-28 | 120 |
MS.gene21029.t1 | MTR_1g492850 | 32.927 | 246 | 146 | 8 | 71 | 301 | 13 | 254 | 6.73e-28 | 118 |
MS.gene21029.t1 | MTR_1g492850 | 32.367 | 207 | 130 | 4 | 122 | 321 | 14 | 217 | 5.94e-25 | 109 |
MS.gene21029.t1 | MTR_2g019860 | 31.716 | 268 | 166 | 8 | 15 | 270 | 76 | 338 | 7.31e-29 | 122 |
MS.gene21029.t1 | MTR_2g019860 | 27.907 | 258 | 175 | 6 | 57 | 305 | 68 | 323 | 1.80e-26 | 115 |
MS.gene21029.t1 | MTR_2g019860 | 27.778 | 216 | 138 | 7 | 112 | 315 | 73 | 282 | 1.20e-18 | 90.5 |
MS.gene21029.t1 | MTR_2g019860 | 33.987 | 153 | 92 | 3 | 174 | 317 | 81 | 233 | 1.22e-18 | 90.5 |
MS.gene21029.t1 | MTR_2g019860 | 32.692 | 156 | 94 | 4 | 11 | 158 | 232 | 384 | 8.56e-14 | 75.1 |
MS.gene21029.t1 | MTR_4g119100 | 28.287 | 251 | 167 | 5 | 65 | 305 | 83 | 330 | 7.19e-27 | 116 |
MS.gene21029.t1 | MTR_4g119100 | 29.213 | 267 | 174 | 7 | 15 | 270 | 83 | 345 | 2.68e-25 | 111 |
MS.gene21029.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 88 | 240 | 4.94e-18 | 88.6 |
MS.gene21029.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 239 | 393 | 5.90e-13 | 72.4 |
MS.gene21029.t1 | MTR_4g119100 | 28.287 | 251 | 167 | 5 | 65 | 305 | 84 | 331 | 1.00e-26 | 116 |
MS.gene21029.t1 | MTR_4g119100 | 29.889 | 271 | 167 | 9 | 15 | 270 | 84 | 346 | 2.44e-25 | 111 |
MS.gene21029.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 89 | 241 | 3.35e-18 | 89.4 |
MS.gene21029.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 240 | 394 | 5.51e-13 | 72.8 |
MS.gene21029.t1 | MTR_4g119100 | 28.185 | 259 | 157 | 6 | 65 | 305 | 84 | 331 | 1.18e-26 | 115 |
MS.gene21029.t1 | MTR_4g119100 | 29.889 | 271 | 167 | 9 | 15 | 270 | 84 | 346 | 2.57e-25 | 111 |
MS.gene21029.t1 | MTR_4g119100 | 33.987 | 153 | 92 | 3 | 174 | 317 | 89 | 241 | 3.55e-18 | 89.4 |
MS.gene21029.t1 | MTR_4g119100 | 32.484 | 157 | 97 | 4 | 11 | 160 | 240 | 394 | 5.51e-13 | 72.8 |
MS.gene21029.t1 | MTR_4g132120 | 29.643 | 280 | 184 | 9 | 29 | 299 | 279 | 554 | 3.51e-26 | 115 |
MS.gene21029.t1 | MTR_4g132120 | 30.556 | 216 | 143 | 4 | 89 | 300 | 293 | 505 | 1.36e-21 | 100 |
MS.gene21029.t1 | MTR_4g132120 | 30.531 | 226 | 152 | 4 | 25 | 249 | 333 | 554 | 9.05e-20 | 94.7 |
MS.gene21029.t1 | MTR_4g132120 | 28.492 | 179 | 118 | 5 | 23 | 199 | 384 | 554 | 2.72e-14 | 77.0 |
MS.gene21029.t1 | MTR_1g492850 | 31.455 | 213 | 131 | 5 | 61 | 260 | 5 | 215 | 3.35e-22 | 99.8 |
MS.gene21029.t1 | MTR_1g492850 | 29.630 | 216 | 127 | 7 | 12 | 208 | 4 | 213 | 1.66e-16 | 82.4 |
MS.gene21029.t1 | MTR_1g492850 | 29.000 | 200 | 125 | 5 | 114 | 299 | 8 | 204 | 2.32e-16 | 82.0 |
MS.gene21029.t1 | MTR_1g492850 | 33.582 | 134 | 81 | 3 | 176 | 301 | 16 | 149 | 7.26e-13 | 71.2 |
MS.gene21029.t1 | MTR_2g069030 | 24.847 | 326 | 211 | 9 | 15 | 316 | 8 | 323 | 4.57e-20 | 92.0 |
MS.gene21029.t1 | MTR_2g036510 | 32.414 | 290 | 160 | 19 | 60 | 321 | 278 | 559 | 1.20e-18 | 90.5 |
MS.gene21029.t1 | MTR_2g036510 | 27.003 | 337 | 214 | 16 | 8 | 316 | 276 | 608 | 1.23e-15 | 80.9 |
MS.gene21029.t1 | MTR_8g105590 | 28.834 | 326 | 199 | 15 | 22 | 319 | 311 | 631 | 5.46e-18 | 88.6 |
MS.gene21029.t1 | MTR_8g105590 | 29.818 | 275 | 162 | 16 | 24 | 273 | 364 | 632 | 2.41e-17 | 86.3 |
MS.gene21029.t1 | MTR_8g105590 | 29.514 | 288 | 171 | 16 | 60 | 321 | 298 | 579 | 5.48e-17 | 85.1 |
MS.gene21029.t1 | MTR_4g007980 | 29.057 | 265 | 149 | 12 | 25 | 252 | 172 | 434 | 4.78e-16 | 81.6 |
MS.gene21029.t1 | MTR_4g007980 | 28.902 | 346 | 188 | 17 | 25 | 315 | 118 | 460 | 8.15e-16 | 80.9 |
MS.gene21029.t1 | MTR_1g107265 | 26.190 | 252 | 154 | 8 | 52 | 274 | 100 | 348 | 5.61e-16 | 82.0 |
MS.gene21029.t1 | MTR_1g107265 | 26.087 | 253 | 155 | 8 | 52 | 275 | 100 | 349 | 6.05e-16 | 82.0 |
MS.gene21029.t1 | MTR_1g089370 | 29.457 | 258 | 153 | 7 | 15 | 246 | 86 | 340 | 6.47e-15 | 79.0 |
MS.gene21029.t1 | MTR_1g089370 | 25.969 | 258 | 161 | 9 | 70 | 300 | 22 | 276 | 2.22e-14 | 77.4 |
MS.gene21029.t1 | MTR_1g089370 | 31.068 | 206 | 127 | 9 | 55 | 250 | 76 | 276 | 1.77e-12 | 71.2 |
MS.gene21029.t1 | MTR_2g087530 | 26.715 | 277 | 174 | 7 | 15 | 263 | 154 | 429 | 3.33e-14 | 76.6 |
MS.gene21029.t1 | MTR_2g087530 | 27.536 | 276 | 169 | 10 | 53 | 299 | 142 | 415 | 7.82e-13 | 72.4 |
MS.gene21029.t1 | MTR_2g087530 | 29.091 | 220 | 118 | 9 | 125 | 307 | 81 | 299 | 1.32e-12 | 71.6 |
MS.gene21029.t1 | MTR_2g087530 | 26.909 | 275 | 172 | 7 | 15 | 261 | 42 | 315 | 5.74e-14 | 75.9 |
MS.gene21029.t1 | MTR_2g087530 | 27.622 | 286 | 174 | 11 | 43 | 299 | 22 | 303 | 5.12e-13 | 72.8 |
MS.gene21029.t1 | MTR_4g071285 | 61.667 | 60 | 14 | 1 | 333 | 383 | 18 | 77 | 1.52e-12 | 64.3 |
MS.gene21029.t1 | MTR_4g050540 | 27.473 | 273 | 184 | 9 | 53 | 313 | 147 | 417 | 5.56e-12 | 69.7 |
MS.gene21029.t1 | MTR_4g071265 | 70.455 | 44 | 13 | 0 | 598 | 641 | 2 | 45 | 1.36e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21029.t1 | AT1G74150 | 37.025 | 316 | 184 | 8 | 23 | 325 | 17 | 330 | 1.98e-55 | 198 |
MS.gene21029.t1 | AT1G74150 | 30.742 | 283 | 176 | 8 | 14 | 284 | 61 | 335 | 2.29e-31 | 129 |
MS.gene21029.t1 | AT1G74150 | 37.097 | 310 | 180 | 8 | 23 | 319 | 17 | 324 | 3.72e-55 | 197 |
MS.gene21029.t1 | AT1G74150 | 31.618 | 272 | 160 | 10 | 63 | 315 | 1 | 265 | 2.41e-36 | 144 |
MS.gene21029.t1 | AT1G74150 | 30.742 | 283 | 177 | 8 | 14 | 284 | 61 | 336 | 3.70e-31 | 129 |
MS.gene21029.t1 | AT1G74150 | 37.097 | 310 | 180 | 8 | 23 | 319 | 17 | 324 | 4.18e-55 | 197 |
MS.gene21029.t1 | AT1G74150 | 31.618 | 272 | 160 | 10 | 63 | 315 | 1 | 265 | 2.53e-36 | 144 |
MS.gene21029.t1 | AT1G74150 | 30.742 | 283 | 177 | 8 | 14 | 284 | 61 | 336 | 3.66e-31 | 129 |
MS.gene21029.t1 | AT1G18610 | 36.964 | 303 | 176 | 8 | 25 | 314 | 22 | 322 | 7.37e-55 | 196 |
MS.gene21029.t1 | AT1G18610 | 31.250 | 272 | 164 | 9 | 63 | 315 | 1 | 268 | 6.55e-33 | 134 |
MS.gene21029.t1 | AT1G18610 | 32.759 | 232 | 146 | 5 | 12 | 236 | 62 | 290 | 7.97e-31 | 127 |
MS.gene21029.t1 | AT1G18610 | 36.964 | 303 | 176 | 8 | 25 | 314 | 22 | 322 | 7.37e-55 | 196 |
MS.gene21029.t1 | AT1G18610 | 31.250 | 272 | 164 | 9 | 63 | 315 | 1 | 268 | 6.55e-33 | 134 |
MS.gene21029.t1 | AT1G18610 | 32.759 | 232 | 146 | 5 | 12 | 236 | 62 | 290 | 7.97e-31 | 127 |
MS.gene21029.t1 | AT1G74150 | 38.462 | 260 | 148 | 6 | 65 | 314 | 46 | 303 | 1.48e-47 | 176 |
MS.gene21029.t1 | AT1G74150 | 30.612 | 294 | 181 | 9 | 3 | 284 | 38 | 320 | 1.88e-31 | 129 |
MS.gene21029.t1 | AT1G74150 | 32.227 | 211 | 132 | 6 | 112 | 315 | 43 | 249 | 2.72e-31 | 129 |
MS.gene21029.t1 | AT1G74150 | 33.654 | 104 | 64 | 1 | 215 | 313 | 42 | 145 | 1.14e-13 | 74.7 |
MS.gene21029.t1 | AT3G05420 | 33.113 | 302 | 182 | 8 | 15 | 299 | 171 | 469 | 1.59e-38 | 152 |
MS.gene21029.t1 | AT3G05420 | 27.170 | 265 | 177 | 7 | 64 | 316 | 170 | 430 | 2.38e-25 | 111 |
MS.gene21029.t1 | AT3G05420 | 33.113 | 302 | 182 | 8 | 15 | 299 | 172 | 470 | 1.60e-38 | 152 |
MS.gene21029.t1 | AT3G05420 | 27.547 | 265 | 176 | 7 | 64 | 316 | 171 | 431 | 2.47e-25 | 111 |
MS.gene21029.t1 | AT5G27630 | 29.808 | 416 | 254 | 11 | 15 | 414 | 172 | 565 | 5.26e-37 | 147 |
MS.gene21029.t1 | AT5G27630 | 34.701 | 268 | 160 | 6 | 15 | 270 | 172 | 436 | 9.59e-37 | 146 |
MS.gene21029.t1 | AT5G27630 | 34.701 | 268 | 160 | 6 | 15 | 270 | 172 | 436 | 1.03e-36 | 146 |
MS.gene21029.t1 | AT5G27630 | 30.874 | 366 | 231 | 10 | 15 | 364 | 172 | 531 | 1.23e-36 | 145 |
MS.gene21029.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.24e-30 | 125 |
MS.gene21029.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 5.99e-23 | 103 |
MS.gene21029.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.24e-30 | 125 |
MS.gene21029.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 5.99e-23 | 103 |
MS.gene21029.t1 | AT5G04420 | 29.129 | 333 | 204 | 11 | 15 | 320 | 22 | 349 | 4.24e-30 | 125 |
MS.gene21029.t1 | AT5G04420 | 27.815 | 302 | 182 | 10 | 64 | 333 | 21 | 318 | 5.99e-23 | 103 |
MS.gene21029.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 1.85e-28 | 120 |
MS.gene21029.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 2.05e-28 | 119 |
MS.gene21029.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.22e-26 | 114 |
MS.gene21029.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 1.85e-28 | 120 |
MS.gene21029.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 2.05e-28 | 119 |
MS.gene21029.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.22e-26 | 114 |
MS.gene21029.t1 | AT2G36360 | 32.331 | 266 | 159 | 6 | 14 | 260 | 57 | 320 | 1.93e-28 | 120 |
MS.gene21029.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 1.98e-28 | 120 |
MS.gene21029.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.13e-26 | 114 |
MS.gene21029.t1 | AT2G36360 | 31.955 | 266 | 160 | 6 | 14 | 260 | 57 | 320 | 2.51e-28 | 119 |
MS.gene21029.t1 | AT2G36360 | 28.763 | 299 | 189 | 7 | 22 | 299 | 14 | 309 | 3.10e-28 | 119 |
MS.gene21029.t1 | AT2G36360 | 32.520 | 246 | 147 | 8 | 71 | 301 | 13 | 254 | 1.72e-26 | 114 |
MS.gene21029.t1 | AT4G04670 | 36.364 | 176 | 109 | 3 | 125 | 300 | 322 | 494 | 7.21e-27 | 117 |
MS.gene21029.t1 | AT4G04670 | 28.205 | 234 | 163 | 4 | 67 | 299 | 314 | 543 | 5.11e-24 | 108 |
MS.gene21029.t1 | AT4G04670 | 30.342 | 234 | 156 | 4 | 19 | 249 | 314 | 543 | 1.16e-23 | 107 |
MS.gene21029.t1 | AT4G04670 | 29.570 | 186 | 125 | 4 | 15 | 199 | 363 | 543 | 3.02e-11 | 67.4 |
MS.gene21029.t1 | AT5G18590 | 28.137 | 263 | 178 | 6 | 65 | 318 | 66 | 326 | 7.62e-27 | 116 |
MS.gene21029.t1 | AT5G18590 | 30.943 | 265 | 170 | 7 | 15 | 269 | 66 | 327 | 6.83e-25 | 110 |
MS.gene21029.t1 | AT5G18590 | 28.372 | 215 | 138 | 8 | 112 | 315 | 63 | 272 | 3.48e-19 | 92.4 |
MS.gene21029.t1 | AT5G18590 | 28.137 | 263 | 178 | 6 | 65 | 318 | 66 | 326 | 7.62e-27 | 116 |
MS.gene21029.t1 | AT5G18590 | 30.943 | 265 | 170 | 7 | 15 | 269 | 66 | 327 | 6.83e-25 | 110 |
MS.gene21029.t1 | AT5G18590 | 28.372 | 215 | 138 | 8 | 112 | 315 | 63 | 272 | 3.48e-19 | 92.4 |
MS.gene21029.t1 | AT2G36360 | 28.247 | 308 | 188 | 8 | 22 | 299 | 14 | 318 | 2.08e-26 | 114 |
MS.gene21029.t1 | AT2G36360 | 31.273 | 275 | 159 | 7 | 14 | 260 | 57 | 329 | 8.61e-26 | 112 |
MS.gene21029.t1 | AT2G36360 | 31.765 | 255 | 146 | 9 | 71 | 301 | 13 | 263 | 1.38e-24 | 108 |
MS.gene21029.t1 | AT5G48180 | 26.183 | 317 | 206 | 12 | 15 | 311 | 8 | 316 | 4.64e-22 | 98.2 |
MS.gene21029.t1 | AT5G48180 | 28.000 | 250 | 169 | 7 | 64 | 311 | 7 | 247 | 7.81e-18 | 85.5 |
MS.gene21029.t1 | AT5G48180 | 29.126 | 206 | 142 | 3 | 114 | 319 | 7 | 208 | 3.34e-17 | 83.6 |
MS.gene21029.t1 | AT1G68050 | 29.794 | 339 | 203 | 15 | 8 | 319 | 285 | 615 | 3.76e-19 | 92.0 |
MS.gene21029.t1 | AT3G07720 | 26.250 | 240 | 167 | 5 | 64 | 299 | 9 | 242 | 5.84e-19 | 89.0 |
MS.gene21029.t1 | AT3G07720 | 30.208 | 192 | 130 | 4 | 114 | 303 | 9 | 198 | 7.68e-18 | 85.5 |
MS.gene21029.t1 | AT3G07720 | 24.024 | 333 | 218 | 11 | 5 | 313 | 1 | 322 | 4.28e-17 | 83.6 |
MS.gene21029.t1 | AT3G07720 | 25.275 | 273 | 179 | 9 | 15 | 268 | 62 | 328 | 5.95e-13 | 70.9 |
MS.gene21029.t1 | AT1G74150 | 34.722 | 144 | 88 | 3 | 176 | 313 | 9 | 152 | 1.98e-18 | 88.6 |
MS.gene21029.t1 | AT1G74150 | 30.682 | 176 | 109 | 7 | 115 | 284 | 2 | 170 | 6.62e-14 | 74.7 |
MS.gene21029.t1 | AT1G74150 | 34.722 | 144 | 88 | 3 | 176 | 313 | 9 | 152 | 1.98e-18 | 88.6 |
MS.gene21029.t1 | AT1G74150 | 30.682 | 176 | 109 | 7 | 115 | 284 | 2 | 170 | 6.62e-14 | 74.7 |
MS.gene21029.t1 | AT5G57360 | 29.499 | 339 | 205 | 18 | 8 | 317 | 273 | 606 | 7.49e-18 | 87.8 |
MS.gene21029.t1 | AT2G18915 | 28.739 | 341 | 201 | 17 | 8 | 316 | 264 | 594 | 2.05e-17 | 86.7 |
MS.gene21029.t1 | AT2G18915 | 27.941 | 340 | 205 | 15 | 8 | 316 | 274 | 604 | 2.26e-17 | 86.3 |
MS.gene21029.t1 | AT2G33070 | 28.033 | 239 | 164 | 5 | 64 | 299 | 153 | 386 | 1.75e-16 | 83.2 |
MS.gene21029.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.95e-13 | 73.6 |
MS.gene21029.t1 | AT2G33070 | 24.316 | 329 | 213 | 10 | 8 | 311 | 147 | 464 | 9.48e-12 | 68.2 |
MS.gene21029.t1 | AT2G33070 | 28.033 | 239 | 164 | 5 | 64 | 299 | 153 | 386 | 1.75e-16 | 83.2 |
MS.gene21029.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 229 | 440 | 1.95e-13 | 73.6 |
MS.gene21029.t1 | AT2G33070 | 24.316 | 329 | 213 | 10 | 8 | 311 | 147 | 464 | 9.48e-12 | 68.2 |
MS.gene21029.t1 | AT1G51550 | 31.071 | 280 | 143 | 17 | 17 | 252 | 166 | 439 | 2.01e-16 | 82.8 |
MS.gene21029.t1 | AT1G51550 | 28.105 | 306 | 176 | 17 | 25 | 298 | 120 | 413 | 7.21e-16 | 81.3 |
MS.gene21029.t1 | AT5G57360 | 28.972 | 321 | 194 | 18 | 8 | 299 | 273 | 588 | 7.46e-16 | 81.6 |
MS.gene21029.t1 | AT5G50310 | 25.000 | 272 | 164 | 9 | 35 | 278 | 92 | 351 | 3.06e-15 | 79.7 |
MS.gene21029.t1 | AT5G50310 | 26.866 | 201 | 124 | 7 | 31 | 211 | 128 | 325 | 5.88e-11 | 66.2 |
MS.gene21029.t1 | AT2G33070 | 27.801 | 241 | 164 | 6 | 64 | 299 | 153 | 388 | 3.83e-15 | 79.0 |
MS.gene21029.t1 | AT2G33070 | 25.229 | 218 | 145 | 5 | 37 | 242 | 231 | 442 | 1.98e-13 | 73.6 |
MS.gene21029.t1 | AT2G27210 | 27.106 | 273 | 185 | 9 | 53 | 313 | 152 | 422 | 3.84e-15 | 79.7 |
MS.gene21029.t1 | AT2G27210 | 27.778 | 270 | 166 | 7 | 22 | 263 | 171 | 439 | 1.01e-14 | 78.6 |
MS.gene21029.t1 | AT1G08420 | 27.076 | 277 | 173 | 7 | 15 | 263 | 175 | 450 | 7.29e-15 | 79.0 |
MS.gene21029.t1 | AT1G08420 | 26.740 | 273 | 186 | 9 | 53 | 313 | 163 | 433 | 1.22e-14 | 78.2 |
MS.gene21029.t1 | AT3G16400 | 26.426 | 333 | 207 | 12 | 5 | 311 | 143 | 463 | 5.51e-14 | 75.1 |
MS.gene21029.t1 | AT3G16400 | 26.426 | 333 | 207 | 12 | 5 | 311 | 143 | 463 | 5.51e-14 | 75.1 |
MS.gene21029.t1 | AT3G16390 | 28.395 | 243 | 156 | 7 | 65 | 299 | 153 | 385 | 5.84e-14 | 75.1 |
MS.gene21029.t1 | AT3G16390 | 26.269 | 335 | 210 | 13 | 5 | 315 | 143 | 464 | 3.99e-13 | 72.4 |
MS.gene21029.t1 | AT3G16390 | 28.395 | 243 | 156 | 7 | 65 | 299 | 153 | 385 | 5.84e-14 | 75.1 |
MS.gene21029.t1 | AT3G16390 | 26.269 | 335 | 210 | 13 | 5 | 315 | 143 | 464 | 3.99e-13 | 72.4 |
MS.gene21029.t1 | AT2G27210 | 26.667 | 270 | 185 | 9 | 53 | 313 | 152 | 417 | 1.03e-13 | 75.1 |
MS.gene21029.t1 | AT2G27210 | 27.715 | 267 | 165 | 8 | 22 | 263 | 171 | 434 | 7.54e-13 | 72.4 |
MS.gene21029.t1 | AT1G03445 | 27.586 | 290 | 179 | 12 | 45 | 314 | 71 | 349 | 2.05e-13 | 74.3 |
MS.gene21029.t1 | AT1G03445 | 30.337 | 178 | 103 | 7 | 125 | 283 | 28 | 203 | 2.12e-13 | 73.9 |
MS.gene21029.t1 | AT1G03445 | 27.820 | 266 | 169 | 10 | 15 | 261 | 86 | 347 | 3.41e-13 | 73.6 |
MS.gene21029.t1 | AT1G03445 | 30.337 | 178 | 103 | 7 | 125 | 283 | 28 | 203 | 2.90e-13 | 73.6 |
MS.gene21029.t1 | AT1G03445 | 27.586 | 290 | 179 | 12 | 45 | 314 | 71 | 349 | 2.98e-13 | 73.6 |
MS.gene21029.t1 | AT1G03445 | 27.820 | 266 | 169 | 10 | 15 | 261 | 86 | 347 | 5.22e-13 | 72.8 |
MS.gene21029.t1 | AT3G16410 | 25.630 | 238 | 171 | 4 | 64 | 299 | 301 | 534 | 3.57e-13 | 73.2 |
MS.gene21029.t1 | AT3G16410 | 25.126 | 199 | 135 | 3 | 37 | 226 | 377 | 570 | 1.62e-12 | 70.9 |
MS.gene21029.t1 | AT3G16410 | 25.526 | 333 | 218 | 12 | 5 | 315 | 292 | 616 | 1.81e-12 | 70.9 |
MS.gene21029.t1 | AT4G03080 | 26.275 | 255 | 158 | 9 | 73 | 300 | 25 | 276 | 3.77e-13 | 73.6 |
MS.gene21029.t1 | AT4G03080 | 26.230 | 305 | 191 | 9 | 15 | 287 | 86 | 388 | 3.96e-11 | 67.0 |
MS.gene21029.t1 | AT1G08420 | 26.296 | 270 | 186 | 9 | 53 | 313 | 163 | 428 | 3.84e-13 | 73.6 |
MS.gene21029.t1 | AT1G08420 | 27.007 | 274 | 172 | 8 | 15 | 263 | 175 | 445 | 6.55e-13 | 72.8 |
MS.gene21029.t1 | AT1G54040 | 31.429 | 140 | 89 | 4 | 167 | 300 | 8 | 146 | 2.17e-11 | 66.2 |
MS.gene21029.t1 | AT1G54040 | 25.781 | 256 | 166 | 9 | 64 | 299 | 8 | 259 | 3.16e-11 | 65.9 |
MS.gene21029.t1 | AT1G54040 | 32.824 | 131 | 81 | 4 | 176 | 300 | 11 | 140 | 4.12e-11 | 65.5 |
MS.gene21029.t1 | AT1G54040 | 25.506 | 247 | 161 | 8 | 72 | 299 | 11 | 253 | 5.16e-11 | 65.1 |
Find 143 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGACATACACACTTGTTTA+TGG | 0.163401 | 1.4:+68909686 | MS.gene21029:CDS |
GAGCAAGTAGTGGTTGCTTT+AGG | 0.236125 | 1.4:-68911241 | None:intergenic |
CTTGATGGAAACAAACAATT+TGG | 0.239299 | 1.4:-68911131 | None:intergenic |
GGTGGTATCCCTTCACATTT+AGG | 0.241948 | 1.4:-68908703 | None:intergenic |
ATGTGGAAGTCTTGGGAAAA+TGG | 0.242978 | 1.4:+68910265 | MS.gene21029:CDS |
AACGTTATTGCAACGACATT+TGG | 0.261258 | 1.4:+68909659 | MS.gene21029:CDS |
ATGTTTGGACCTTGACAAAA+TGG | 0.261385 | 1.4:+68908519 | MS.gene21029:CDS |
TTTAGGCTTAATCCATTCTT+TGG | 0.268713 | 1.4:-68908686 | None:intergenic |
ATTGATGGAGCCTTTGATTC+AGG | 0.269269 | 1.4:+68910942 | MS.gene21029:CDS |
AGCCACATTGCTTTCTTCTT+AGG | 0.272073 | 1.4:-68907915 | None:intergenic |
GGTCACTCTGCTTGCTTCTC+TGG | 0.304115 | 1.4:+68907978 | MS.gene21029:CDS |
CGACCGTCTCCAATCATAAA+AGG | 0.307200 | 1.4:+68911263 | MS.gene21029:CDS |
CGACCGTGTCAATTTGATTC+AGG | 0.313607 | 1.4:+68910315 | MS.gene21029:CDS |
AGTCATTGTACTCTTGCTAT+TGG | 0.314706 | 1.4:+68908901 | MS.gene21029:CDS |
GCAAAGTCTTCGGAAGTTAT+TGG | 0.321726 | 1.4:+68910019 | MS.gene21029:CDS |
GACACCGATATTGTTATATA+TGG | 0.328819 | 1.4:+68909772 | MS.gene21029:CDS |
CAAGCATTATTTCCACTTGC+AGG | 0.349704 | 1.4:-68911362 | None:intergenic |
CAGGAGTGACTTGCAAGGTT+TGG | 0.352406 | 1.4:+68911322 | MS.gene21029:CDS |
TGTGGAAGTCTTGGGAAAAT+GGG | 0.354487 | 1.4:+68910266 | MS.gene21029:CDS |
GTCATTGTACTCTTGCTATT+GGG | 0.354949 | 1.4:+68908902 | MS.gene21029:CDS |
GAAGTTCTTGGCAAAATTGA+TGG | 0.359155 | 1.4:+68910927 | MS.gene21029:CDS |
AGCAAGTAGTGGTTGCTTTA+GGG | 0.360149 | 1.4:-68911240 | None:intergenic |
TAGATTGGTACCGAAGTTCT+TGG | 0.360287 | 1.4:+68910915 | MS.gene21029:intron |
ACCAGAAAATTTCGCGTATC+GGG | 0.384937 | 1.4:+68910238 | MS.gene21029:intron |
ACGTTATTGCAACGACATTT+GGG | 0.386709 | 1.4:+68909660 | MS.gene21029:CDS |
AAGGTTCTTCACCAGGAGTC+AGG | 0.389468 | 1.4:+68909200 | MS.gene21029:CDS |
GAATCCATGGCAGAAGCATT+TGG | 0.396548 | 1.4:-68910546 | None:intergenic |
CGGGAATAATGTGGAAGTCT+TGG | 0.398146 | 1.4:+68910257 | MS.gene21029:CDS |
AAATGGACATAACAACTTAT+CGG | 0.398694 | 1.4:+68909993 | MS.gene21029:CDS |
TTATTTCAGGTATACATCAT+TGG | 0.403078 | 1.4:+68909622 | MS.gene21029:intron |
AATGGACATAACAACTTATC+GGG | 0.405221 | 1.4:+68909994 | MS.gene21029:CDS |
AACTCCATCTCATAGTTCTA+AGG | 0.405995 | 1.4:-68908837 | None:intergenic |
GATAAGTTGTTATGTCCATT+TGG | 0.409080 | 1.4:-68909991 | None:intergenic |
TGAAGATATTGTTCTTGCTT+TGG | 0.410809 | 1.4:-68910705 | None:intergenic |
GCATGACCTGCCCTGACTCC+TGG | 0.413772 | 1.4:-68909211 | None:intergenic |
GGGAATAATGTGGAAGTCTT+GGG | 0.423116 | 1.4:+68910258 | MS.gene21029:CDS |
TTGATCTTTACACCAAAGAA+TGG | 0.429246 | 1.4:+68908674 | MS.gene21029:CDS |
CAAGGTTTGGCTTTAACACT+AGG | 0.430586 | 1.4:+68911335 | MS.gene21029:CDS |
GGGAATAAGCTTATTGTGTA+TGG | 0.432274 | 1.4:+68908922 | MS.gene21029:CDS |
AGGATTAAAACCTAAAACCT+TGG | 0.432402 | 1.4:-68907943 | None:intergenic |
TATCCGCGTCCGGCAGGCTT+CGG | 0.433353 | 1.4:-68910771 | None:intergenic |
CTAATGACTGCAGTAGTGAA+TGG | 0.440066 | 1.4:+68910969 | MS.gene21029:CDS |
TTCATGAGAGGCTGACTTGA+TGG | 0.443717 | 1.4:-68911146 | None:intergenic |
GTCTTGGGAAAATGGGGTTA+TGG | 0.445343 | 1.4:+68910273 | MS.gene21029:CDS |
CAGGCTTCGGTTCTAAAGCT+TGG | 0.446872 | 1.4:-68910758 | None:intergenic |
CCCGCCATATATAACAATAT+CGG | 0.451213 | 1.4:-68909776 | None:intergenic |
CGATATCGCCGAGTCAAACT+AGG | 0.452268 | 1.4:+68910573 | MS.gene21029:CDS |
TGAGTGTATCCGCGTCCGGC+AGG | 0.454398 | 1.4:-68910777 | None:intergenic |
TGGAGCAAGGTTACTACAAC+AGG | 0.454699 | 1.4:+68908544 | MS.gene21029:CDS |
TTCAACATCCCACACCTTTG+TGG | 0.462742 | 1.4:-68910439 | None:intergenic |
TCAACAAGATCTTCATGTAA+TGG | 0.469515 | 1.4:+68910674 | MS.gene21029:CDS |
TTATCGGGGTGCAAAGTCTT+CGG | 0.475381 | 1.4:+68910009 | MS.gene21029:CDS |
TACCCGGAGAACATAAAATC+AGG | 0.479502 | 1.4:+68911303 | MS.gene21029:CDS |
CAATGACTATCTCTAGGAAC+AGG | 0.483951 | 1.4:-68908886 | None:intergenic |
ATGGAGATGAATGCTGAGAC+AGG | 0.490805 | 1.4:-68910488 | None:intergenic |
GTGTTGAGTGTATCCGCGTC+CGG | 0.503593 | 1.4:-68910781 | None:intergenic |
GTCCTACAAGAACAGCACTA+TGG | 0.503973 | 1.4:-68908591 | None:intergenic |
CTTGCAGCAGAGCATCCAAA+TGG | 0.505763 | 1.4:+68909976 | MS.gene21029:CDS |
TAATGACTGCAGTAGTGAAT+GGG | 0.507894 | 1.4:+68910970 | MS.gene21029:CDS |
AGCAGTGAATGTTGGAACTA+AGG | 0.508106 | 1.4:+68909234 | MS.gene21029:CDS |
TGAATAATCTATCAGGGAGC+AGG | 0.510071 | 1.4:+68911098 | MS.gene21029:intron |
AGCCATAGTGCTGTTCTTGT+AGG | 0.510145 | 1.4:+68908589 | MS.gene21029:CDS |
TCAAGAAAAGAAGACCATCC+TGG | 0.511840 | 1.4:+68910044 | MS.gene21029:CDS |
GGATTAAAACCTAAAACCTT+GGG | 0.516565 | 1.4:-68907942 | None:intergenic |
GACCAGAAAATTTCGCGTAT+CGG | 0.516872 | 1.4:+68910237 | MS.gene21029:intron |
GGTCATGCAGCAGTGAATGT+TGG | 0.526745 | 1.4:+68909226 | MS.gene21029:CDS |
TTCAGGTATACATCATTGGA+GGG | 0.528619 | 1.4:+68909626 | MS.gene21029:intron |
TGAAACAATGACTTGGACTA+GGG | 0.529748 | 1.4:+68908993 | MS.gene21029:CDS |
AACACTAACAATTCATTCAA+AGG | 0.530492 | 1.4:-68909949 | None:intergenic |
CAAATCATGTGGATAATTCG+AGG | 0.531788 | 1.4:+68911171 | MS.gene21029:CDS |
TTGTCAAGTTGACAAGTGCT+TGG | 0.532756 | 1.4:-68910606 | None:intergenic |
GAACCGAAGCCTGCCGGACG+CGG | 0.532959 | 1.4:+68910768 | MS.gene21029:CDS |
TTTCAGGTATACATCATTGG+AGG | 0.533107 | 1.4:+68909625 | MS.gene21029:intron |
TGGTCTCAACTTGATATACA+TGG | 0.535726 | 1.4:+68909706 | MS.gene21029:CDS |
TTGTATCTACTCCGCCATCC+AGG | 0.538216 | 1.4:-68910062 | None:intergenic |
CCGATATTGTTATATATGGC+GGG | 0.538845 | 1.4:+68909776 | MS.gene21029:CDS |
AGTCACACTGCTACTCTTGT+TGG | 0.540157 | 1.4:+68908739 | MS.gene21029:CDS |
ATTGTGTATGGTGGAGATAG+TGG | 0.545972 | 1.4:+68908934 | MS.gene21029:CDS |
CAAGAACAATATCTTCATGT+TGG | 0.548229 | 1.4:+68910711 | MS.gene21029:CDS |
TGGATTAAGCCTAAATGTGA+AGG | 0.551727 | 1.4:+68908694 | MS.gene21029:CDS |
TGTTCTTGATCAGATTGAGA+TGG | 0.553752 | 1.4:-68910507 | None:intergenic |
GCTTTAGAACCGAAGCCTGC+CGG | 0.554277 | 1.4:+68910762 | MS.gene21029:CDS |
TCTGATCAAGAACAGACTCC+AGG | 0.556028 | 1.4:+68910516 | MS.gene21029:CDS |
GCGATATCGCTGAGAATCCA+TGG | 0.559368 | 1.4:-68910559 | None:intergenic |
GTAGCAGTGTGACTTTCCCT+TGG | 0.559880 | 1.4:-68908730 | None:intergenic |
GTATACATCATTGGAGGGGT+CGG | 0.560007 | 1.4:+68909631 | MS.gene21029:CDS |
CATTAGAAAACCTGAATCAA+AGG | 0.560029 | 1.4:-68910952 | None:intergenic |
AAAACCAAATGCTTCTGCCA+TGG | 0.560581 | 1.4:+68910542 | MS.gene21029:CDS |
TTGAAACAATGACTTGGACT+AGG | 0.562915 | 1.4:+68908992 | MS.gene21029:CDS |
ACCGATATTGTTATATATGG+CGG | 0.564182 | 1.4:+68909775 | MS.gene21029:CDS |
GGCACATCACCTTTAACCTC+AGG | 0.564358 | 1.4:-68908865 | None:intergenic |
GTGGAAGTCTTGGGAAAATG+GGG | 0.565975 | 1.4:+68910267 | MS.gene21029:CDS |
TGACTTTCCCTTGGTGAAGG+TGG | 0.566581 | 1.4:-68908721 | None:intergenic |
AGAGTACAATGACTATCTCT+AGG | 0.569296 | 1.4:-68908892 | None:intergenic |
GTGTGACTTTCCCTTGGTGA+AGG | 0.574494 | 1.4:-68908724 | None:intergenic |
ACACTAGGAGGGCCTGCAAG+TGG | 0.574524 | 1.4:+68911350 | MS.gene21029:CDS |
AATAAGCTTATTGTGTATGG+TGG | 0.576597 | 1.4:+68908925 | MS.gene21029:CDS |
AGGTTCTTCACCAGGAGTCA+GGG | 0.576841 | 1.4:+68909201 | MS.gene21029:CDS |
TTGATATTGAAACAATGACT+TGG | 0.577584 | 1.4:+68908986 | MS.gene21029:CDS |
GAGTGACCCCATCTTTGAGA+AGG | 0.578017 | 1.4:-68907963 | None:intergenic |
GGTTTGGCTTTAACACTAGG+AGG | 0.578223 | 1.4:+68911338 | MS.gene21029:CDS |
CACACTGCTACTCTTGTTGG+TGG | 0.578346 | 1.4:+68908742 | MS.gene21029:CDS |
TAGACCTTAGAACTATGAGA+TGG | 0.585997 | 1.4:+68908833 | MS.gene21029:CDS |
TGGACCTTGACAAAATGGAA+TGG | 0.587543 | 1.4:+68908524 | MS.gene21029:CDS |
TCTTCACCAGGAGTCAGGGC+AGG | 0.593035 | 1.4:+68909205 | MS.gene21029:CDS |
GAATTGCTGCCACAAAGGTG+TGG | 0.593293 | 1.4:+68910430 | MS.gene21029:CDS |
CTATGGCTATCTCTAGGACC+TGG | 0.596063 | 1.4:-68908574 | None:intergenic |
TTTAATCCTTCTCAAAGATG+GGG | 0.598086 | 1.4:+68907957 | MS.gene21029:CDS |
GAAAAGAAGACCATCCTGGA+TGG | 0.600096 | 1.4:+68910048 | MS.gene21029:CDS |
GTTTGGCTTTAACACTAGGA+GGG | 0.600809 | 1.4:+68911339 | MS.gene21029:CDS |
ACAGCACTATGGCTATCTCT+AGG | 0.602607 | 1.4:-68908580 | None:intergenic |
ACGCGGATACACTCAACACT+TGG | 0.606240 | 1.4:+68910785 | MS.gene21029:CDS |
TTCGCGTATCGGGAATAATG+TGG | 0.607764 | 1.4:+68910248 | MS.gene21029:CDS |
ATCTACTCCGCCATCCAGGA+TGG | 0.609038 | 1.4:-68910058 | None:intergenic |
GAACTTCACAACAGAAGAGG+AGG | 0.609239 | 1.4:+68910406 | MS.gene21029:CDS |
GATAGTGGTGATCAGTATCA+TGG | 0.612803 | 1.4:+68908949 | MS.gene21029:CDS |
CAGGAACTTCACAACAGAAG+AGG | 0.614241 | 1.4:+68910403 | MS.gene21029:intron |
ACATGATTTGAGTTCATGAG+AGG | 0.614402 | 1.4:-68911158 | None:intergenic |
ACTACAACAGGTGAAAAGCC+AGG | 0.619726 | 1.4:+68908556 | MS.gene21029:CDS |
TCTCATGAACTCAAATCATG+TGG | 0.625132 | 1.4:+68911160 | MS.gene21029:CDS |
AGCAATGTGGCTGTATCCCA+AGG | 0.627800 | 1.4:+68907926 | MS.gene21029:CDS |
GGATTAAGCCTAAATGTGAA+GGG | 0.630444 | 1.4:+68908695 | MS.gene21029:CDS |
TCAGGTATACATCATTGGAG+GGG | 0.630931 | 1.4:+68909627 | MS.gene21029:intron |
GAGGAGAATTGCTGCCACAA+AGG | 0.632549 | 1.4:+68910425 | MS.gene21029:CDS |
TGACAAAATGGAATGGAGCA+AGG | 0.633271 | 1.4:+68908531 | MS.gene21029:CDS |
AATTGCTGCCACAAAGGTGT+GGG | 0.636773 | 1.4:+68910431 | MS.gene21029:CDS |
GGTTGCTTTAGGGCATAGCA+CGG | 0.638751 | 1.4:-68911230 | None:intergenic |
TCTGACTTGTAGCAGGTGTG+GGG | 0.643978 | 1.4:+68909915 | MS.gene21029:intron |
GGAGACGGTCGAGCAAGTAG+TGG | 0.648193 | 1.4:-68911251 | None:intergenic |
AAGAAGACCATCCTGGATGG+CGG | 0.653485 | 1.4:+68910051 | MS.gene21029:CDS |
AGGGATACCACCTTCACCAA+GGG | 0.655838 | 1.4:+68908714 | MS.gene21029:CDS |
TGGAGATGAATGCTGAGACA+GGG | 0.656111 | 1.4:-68910487 | None:intergenic |
AAAATCAGGAGTGACTTGCA+AGG | 0.656845 | 1.4:+68911317 | MS.gene21029:CDS |
CTACCTGAATCAAATTGACA+CGG | 0.661599 | 1.4:-68910318 | None:intergenic |
ACTAATACAGTGTCTTTACC+CGG | 0.667635 | 1.4:+68911287 | MS.gene21029:CDS |
GTATGAGAAAACCGTCCTTG+TGG | 0.675141 | 1.4:-68909736 | None:intergenic |
AAGGGATACCACCTTCACCA+AGG | 0.676653 | 1.4:+68908713 | MS.gene21029:CDS |
ATGGTCAACAGCCACAAGGA+CGG | 0.677236 | 1.4:+68909725 | MS.gene21029:CDS |
ATCGGTGTCTGCAACAACAG+CGG | 0.678886 | 1.4:-68909758 | None:intergenic |
ATACATGGTCAACAGCCACA+AGG | 0.682432 | 1.4:+68909721 | MS.gene21029:CDS |
ATGGACATAACAACTTATCG+GGG | 0.694887 | 1.4:+68909995 | MS.gene21029:CDS |
CTCCTAAGAAGAAAGCAATG+TGG | 0.723011 | 1.4:+68907913 | MS.gene21029:CDS |
TGGCGGAGTAGATACAAACA+CGG | 0.767759 | 1.4:+68910068 | MS.gene21029:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTGAAAATAATGATTTT+TGG | - | chr1.4:68909078-68909097 | None:intergenic | 10.0% |
!! | TATATAGCATAAGTAATTAA+CGG | - | chr1.4:68909563-68909582 | None:intergenic | 15.0% |
!! | TTAATTACTTATGCTATATA+TGG | + | chr1.4:68909563-68909582 | MS.gene21029:intron | 15.0% |
!!! | AATCTTATAATTTGTTCATA+TGG | + | chr1.4:68909036-68909055 | MS.gene21029:intron | 15.0% |
!! | AACAAATGAATAATCTATCA+GGG | + | chr1.4:68911092-68911111 | MS.gene21029:intron | 20.0% |
!! | TAACAAATGAATAATCTATC+AGG | + | chr1.4:68911091-68911110 | MS.gene21029:intron | 20.0% |
!! | TAAGATAGCAAAAATATGAT+TGG | - | chr1.4:68908361-68908380 | None:intergenic | 20.0% |
!! | TTAAATTTGTAATGTTATGC+AGG | + | chr1.4:68910384-68910403 | MS.gene21029:intron | 20.0% |
!!! | AAGACTTATGTATATTTTTG+GGG | + | chr1.4:68908001-68908020 | MS.gene21029:CDS | 20.0% |
!!! | AATTTGAATTTTGAAAGCAA+AGG | - | chr1.4:68910816-68910835 | None:intergenic | 20.0% |
!!! | ATAATTTGTTCATATGGAAA+TGG | + | chr1.4:68909042-68909061 | MS.gene21029:intron | 20.0% |
!!! | GAAGACTTATGTATATTTTT+GGG | + | chr1.4:68908000-68908019 | MS.gene21029:CDS | 20.0% |
!!! | TATGAATTTAGGAGTATTTT+AGG | - | chr1.4:68909332-68909351 | None:intergenic | 20.0% |
!!! | TATTTATAGGAATTTGTTCT+AGG | - | chr1.4:68909387-68909406 | None:intergenic | 20.0% |
!!! | TTCTCAAAAGTGTTATTTAT+AGG | - | chr1.4:68909400-68909419 | None:intergenic | 20.0% |
! | AAATGGACATAACAACTTAT+CGG | + | chr1.4:68909993-68910012 | MS.gene21029:CDS | 25.0% |
! | AACACTAACAATTCATTCAA+AGG | - | chr1.4:68909952-68909971 | None:intergenic | 25.0% |
! | ATAGGATAAAGCTAATTTGA+CGG | - | chr1.4:68909811-68909830 | None:intergenic | 25.0% |
! | TATATACACACTGTGTTTAA+TGG | + | chr1.4:68908065-68908084 | MS.gene21029:intron | 25.0% |
! | TCGTAAGTTTATTACTTCTT+TGG | + | chr1.4:68908103-68908122 | MS.gene21029:intron | 25.0% |
! | TTATGACAGTTGAAAAATCA+AGG | + | chr1.4:68909181-68909200 | MS.gene21029:intron | 25.0% |
! | TTGATATTGAAACAATGACT+TGG | + | chr1.4:68908986-68909005 | MS.gene21029:CDS | 25.0% |
!! | AAAGAACTAACAATGTGTTT+TGG | + | chr1.4:68910215-68910234 | MS.gene21029:intron | 25.0% |
!! | GGAAGACTTATGTATATTTT+TGG | + | chr1.4:68907999-68908018 | MS.gene21029:CDS | 25.0% |
!! | GTATTAGTTCCTTTTATGAT+TGG | - | chr1.4:68911275-68911294 | None:intergenic | 25.0% |
!! | TTATTTCAGGTATACATCAT+TGG | + | chr1.4:68909622-68909641 | MS.gene21029:intron | 25.0% |
!! | TTTTAATCCTTCTCAAAGAT+GGG | + | chr1.4:68907956-68907975 | MS.gene21029:CDS | 25.0% |
!! | TTTTAGTGATGTACTATGTT+TGG | + | chr1.4:68908504-68908523 | MS.gene21029:CDS | 25.0% |
!!! | AATAATGATTTTTGGTCACT+AGG | - | chr1.4:68909070-68909089 | None:intergenic | 25.0% |
!!! | ATTGAGAAAAGAAAGTGTTT+TGG | - | chr1.4:68908235-68908254 | None:intergenic | 25.0% |
!!! | ATTTAATTTTAGGGATGTTG+TGG | + | chr1.4:68908472-68908491 | MS.gene21029:intron | 25.0% |
!!! | TTTGATTTTGAATCCTAGAT+TGG | + | chr1.4:68910900-68910919 | MS.gene21029:intron | 25.0% |
AATAAGCTTATTGTGTATGG+TGG | + | chr1.4:68908925-68908944 | MS.gene21029:CDS | 30.0% | |
AATGGACATAACAACTTATC+GGG | + | chr1.4:68909994-68910013 | MS.gene21029:CDS | 30.0% | |
ACCGATATTGTTATATATGG+CGG | + | chr1.4:68909775-68909794 | MS.gene21029:CDS | 30.0% | |
AGCAAATTTCAAAAGCTTAC+AGG | - | chr1.4:68911023-68911042 | None:intergenic | 30.0% | |
AGGATTAAAACCTAAAACCT+TGG | - | chr1.4:68907946-68907965 | None:intergenic | 30.0% | |
CAAGAACAATATCTTCATGT+TGG | + | chr1.4:68910711-68910730 | MS.gene21029:CDS | 30.0% | |
CATTAGAAAACCTGAATCAA+AGG | - | chr1.4:68910955-68910974 | None:intergenic | 30.0% | |
CTAGGAGAATAAAACAACAA+TGG | - | chr1.4:68909369-68909388 | None:intergenic | 30.0% | |
CTCTTGTGATGATTTATTTC+AGG | + | chr1.4:68909609-68909628 | MS.gene21029:intron | 30.0% | |
CTTGATGGAAACAAACAATT+TGG | - | chr1.4:68911134-68911153 | None:intergenic | 30.0% | |
GACACCGATATTGTTATATA+TGG | + | chr1.4:68909772-68909791 | MS.gene21029:CDS | 30.0% | |
GATAAGTTGTTATGTCCATT+TGG | - | chr1.4:68909994-68910013 | None:intergenic | 30.0% | |
GGATTAAAACCTAAAACCTT+GGG | - | chr1.4:68907945-68907964 | None:intergenic | 30.0% | |
GTTACATAAATCGTAGTACT+AGG | - | chr1.4:68911075-68911094 | None:intergenic | 30.0% | |
TAAATCATCACAAGAGTAAG+TGG | - | chr1.4:68909605-68909624 | None:intergenic | 30.0% | |
TAGGATAAAGCTAATTTGAC+GGG | - | chr1.4:68909810-68909829 | None:intergenic | 30.0% | |
TCAACAAGATCTTCATGTAA+TGG | + | chr1.4:68910674-68910693 | MS.gene21029:CDS | 30.0% | |
TGAAGATATTGTTCTTGCTT+TGG | - | chr1.4:68910708-68910727 | None:intergenic | 30.0% | |
TTGACATACACACTTGTTTA+TGG | + | chr1.4:68909686-68909705 | MS.gene21029:CDS | 30.0% | |
TTGATCTTTACACCAAAGAA+TGG | + | chr1.4:68908674-68908693 | MS.gene21029:CDS | 30.0% | |
TTGTCTTCAACTTCTATCTT+TGG | + | chr1.4:68908202-68908221 | MS.gene21029:intron | 30.0% | |
TTTAATCCTTCTCAAAGATG+GGG | + | chr1.4:68907957-68907976 | MS.gene21029:CDS | 30.0% | |
TTTAGGCTTAATCCATTCTT+TGG | - | chr1.4:68908689-68908708 | None:intergenic | 30.0% | |
! | ATCAATTTTGCCAAGAACTT+CGG | - | chr1.4:68910928-68910947 | None:intergenic | 30.0% |
! | CATGTTGGTGAAGATAAAAA+AGG | + | chr1.4:68910726-68910745 | MS.gene21029:CDS | 30.0% |
! | GGACACAAAATGATAGTTTT+TGG | + | chr1.4:68908610-68908629 | MS.gene21029:CDS | 30.0% |
! | TTTTATTGCCTAGTTTGACT+CGG | - | chr1.4:68910584-68910603 | None:intergenic | 30.0% |
!! | CACAAAATGATAGTTTTTGG+TGG | + | chr1.4:68908613-68908632 | MS.gene21029:CDS | 30.0% |
!! | GTTTTAATCCTTCTCAAAGA+TGG | + | chr1.4:68907955-68907974 | MS.gene21029:CDS | 30.0% |
!!! | ATAGTTTTTGGTGGTACAAA+TGG | + | chr1.4:68908622-68908641 | MS.gene21029:CDS | 30.0% |
!!! | TAGTTTTTGGTGGTACAAAT+GGG | + | chr1.4:68908623-68908642 | MS.gene21029:CDS | 30.0% |
AAAAAGAGCTGCTAAGGAAT+AGG | - | chr1.4:68909829-68909848 | None:intergenic | 35.0% | |
AAAAATCAAGGTTCTTCACC+AGG | + | chr1.4:68909193-68909212 | MS.gene21029:CDS | 35.0% | |
AACGTTATTGCAACGACATT+TGG | + | chr1.4:68909659-68909678 | MS.gene21029:CDS | 35.0% | |
ACGTTATTGCAACGACATTT+GGG | + | chr1.4:68909660-68909679 | MS.gene21029:CDS | 35.0% | |
ACTAATACAGTGTCTTTACC+CGG | + | chr1.4:68911287-68911306 | MS.gene21029:CDS | 35.0% | |
AGAGTACAATGACTATCTCT+AGG | - | chr1.4:68908895-68908914 | None:intergenic | 35.0% | |
AGGATAAAGCTAATTTGACG+GGG | - | chr1.4:68909809-68909828 | None:intergenic | 35.0% | |
ATGGACATAACAACTTATCG+GGG | + | chr1.4:68909995-68910014 | MS.gene21029:CDS | 35.0% | |
ATGTTTGGACCTTGACAAAA+TGG | + | chr1.4:68908519-68908538 | MS.gene21029:CDS | 35.0% | |
CAAATCATGTGGATAATTCG+AGG | + | chr1.4:68911171-68911190 | MS.gene21029:CDS | 35.0% | |
CCCGCCATATATAACAATAT+CGG | - | chr1.4:68909779-68909798 | None:intergenic | 35.0% | |
CCGATATTGTTATATATGGC+GGG | + | chr1.4:68909776-68909795 | MS.gene21029:CDS | 35.0% | |
CTACCTGAATCAAATTGACA+CGG | - | chr1.4:68910321-68910340 | None:intergenic | 35.0% | |
GAAGTTCTTGGCAAAATTGA+TGG | + | chr1.4:68910927-68910946 | MS.gene21029:CDS | 35.0% | |
GGATTAAGCCTAAATGTGAA+GGG | + | chr1.4:68908695-68908714 | MS.gene21029:CDS | 35.0% | |
GGGAATAAGCTTATTGTGTA+TGG | + | chr1.4:68908922-68908941 | MS.gene21029:CDS | 35.0% | |
TAATGACTGCAGTAGTGAAT+GGG | + | chr1.4:68910970-68910989 | MS.gene21029:CDS | 35.0% | |
TAGACCTTAGAACTATGAGA+TGG | + | chr1.4:68908833-68908852 | MS.gene21029:CDS | 35.0% | |
TATGTGTGCTGAGAGAAATT+AGG | - | chr1.4:68908269-68908288 | None:intergenic | 35.0% | |
TCTCATGAACTCAAATCATG+TGG | + | chr1.4:68911160-68911179 | MS.gene21029:CDS | 35.0% | |
TGGATTAAGCCTAAATGTGA+AGG | + | chr1.4:68908694-68908713 | MS.gene21029:CDS | 35.0% | |
TGGCTATCATAATGAAATCC+TGG | - | chr1.4:68909892-68909911 | None:intergenic | 35.0% | |
TGGTCTCAACTTGATATACA+TGG | + | chr1.4:68909706-68909725 | MS.gene21029:CDS | 35.0% | |
TGTTCTTGATCAGATTGAGA+TGG | - | chr1.4:68910510-68910529 | None:intergenic | 35.0% | |
TTCAGGTATACATCATTGGA+GGG | + | chr1.4:68909626-68909645 | MS.gene21029:intron | 35.0% | |
! | AACTCCATCTCATAGTTCTA+AGG | - | chr1.4:68908840-68908859 | None:intergenic | 35.0% |
! | ACATGATTTGAGTTCATGAG+AGG | - | chr1.4:68911161-68911180 | None:intergenic | 35.0% |
! | ACTCCTGATTTTATGTTCTC+CGG | - | chr1.4:68911309-68911328 | None:intergenic | 35.0% |
! | AGTCATTGTACTCTTGCTAT+TGG | + | chr1.4:68908901-68908920 | MS.gene21029:CDS | 35.0% |
! | AGTTCTTTTCCTGAGGTTAA+AGG | + | chr1.4:68908856-68908875 | MS.gene21029:CDS | 35.0% |
! | GGTGAAAGACTAGTGATTTT+TGG | + | chr1.4:68908763-68908782 | MS.gene21029:CDS | 35.0% |
! | GTTCCTTTTATGATTGGAGA+CGG | - | chr1.4:68911269-68911288 | None:intergenic | 35.0% |
! | TAGTGGTAATGTTAGTTTCC+AGG | + | chr1.4:68909871-68909890 | MS.gene21029:intron | 35.0% |
! | TGAAACAATGACTTGGACTA+GGG | + | chr1.4:68908993-68909012 | MS.gene21029:CDS | 35.0% |
! | TTGAAACAATGACTTGGACT+AGG | + | chr1.4:68908992-68909011 | MS.gene21029:CDS | 35.0% |
! | TTTCAGGTATACATCATTGG+AGG | + | chr1.4:68909625-68909644 | MS.gene21029:intron | 35.0% |
!! | GAAAGACTAGTGATTTTTGG+TGG | + | chr1.4:68908766-68908785 | MS.gene21029:CDS | 35.0% |
!! | GTCATTGTACTCTTGCTATT+GGG | + | chr1.4:68908902-68908921 | MS.gene21029:CDS | 35.0% |
!! | TAATTTTAGGGATGTTGTGG+AGG | + | chr1.4:68908475-68908494 | MS.gene21029:intron | 35.0% |
!! | TATTGTTATATATGGCGGGT+AGG | + | chr1.4:68909780-68909799 | MS.gene21029:intron | 35.0% |
!!! | AGCCTTTTTTCACGAACAAT+TGG | + | chr1.4:68909537-68909556 | MS.gene21029:intron | 35.0% |
AAAACCAAATGCTTCTGCCA+TGG | + | chr1.4:68910542-68910561 | MS.gene21029:CDS | 40.0% | |
AAGAACTTCGGTACCAATCT+AGG | - | chr1.4:68910916-68910935 | None:intergenic | 40.0% | |
ACCAGAAAATTTCGCGTATC+GGG | + | chr1.4:68910238-68910257 | MS.gene21029:intron | 40.0% | |
AGCAGTGAATGTTGGAACTA+AGG | + | chr1.4:68909234-68909253 | MS.gene21029:CDS | 40.0% | |
AGCCACATTGCTTTCTTCTT+AGG | - | chr1.4:68907918-68907937 | None:intergenic | 40.0% | |
ATGTGGAAGTCTTGGGAAAA+TGG | + | chr1.4:68910265-68910284 | MS.gene21029:CDS | 40.0% | |
ATTGATGGAGCCTTTGATTC+AGG | + | chr1.4:68910942-68910961 | MS.gene21029:CDS | 40.0% | |
CAAGCATTATTTCCACTTGC+AGG | - | chr1.4:68911365-68911384 | None:intergenic | 40.0% | |
CGATACAAAAAGAGCTGCTA+AGG | - | chr1.4:68909835-68909854 | None:intergenic | 40.0% | |
CGTGTCAATTTGATTCAGGT+AGG | + | chr1.4:68910319-68910338 | MS.gene21029:intron | 40.0% | |
CTAATGACTGCAGTAGTGAA+TGG | + | chr1.4:68910969-68910988 | MS.gene21029:CDS | 40.0% | |
CTCCTAAGAAGAAAGCAATG+TGG | + | chr1.4:68907913-68907932 | MS.gene21029:CDS | 40.0% | |
GACCAGAAAATTTCGCGTAT+CGG | + | chr1.4:68910237-68910256 | MS.gene21029:intron | 40.0% | |
GACGGATGTTAGTAAGTTAG+TGG | + | chr1.4:68909854-68909873 | MS.gene21029:intron | 40.0% | |
GCAAAGTCTTCGGAAGTTAT+TGG | + | chr1.4:68910019-68910038 | MS.gene21029:CDS | 40.0% | |
GGCCAATTGTTCGTGAAAAA+AGG | - | chr1.4:68909542-68909561 | None:intergenic | 40.0% | |
GGGAATAATGTGGAAGTCTT+GGG | + | chr1.4:68910258-68910277 | MS.gene21029:CDS | 40.0% | |
GTTCGTGAAAAAAGGCTAGA+CGG | - | chr1.4:68909534-68909553 | None:intergenic | 40.0% | |
TACCCGGAGAACATAAAATC+AGG | + | chr1.4:68911303-68911322 | MS.gene21029:CDS | 40.0% | |
TCAAGAAAAGAAGACCATCC+TGG | + | chr1.4:68910044-68910063 | MS.gene21029:CDS | 40.0% | |
TCAGGTATACATCATTGGAG+GGG | + | chr1.4:68909627-68909646 | MS.gene21029:intron | 40.0% | |
TGAATAATCTATCAGGGAGC+AGG | + | chr1.4:68911098-68911117 | MS.gene21029:intron | 40.0% | |
TGACAAAATGGAATGGAGCA+AGG | + | chr1.4:68908531-68908550 | MS.gene21029:CDS | 40.0% | |
TGGACCTTGACAAAATGGAA+TGG | + | chr1.4:68908524-68908543 | MS.gene21029:CDS | 40.0% | |
TGTGGAAGTCTTGGGAAAAT+GGG | + | chr1.4:68910266-68910285 | MS.gene21029:CDS | 40.0% | |
! | AAAATCAGGAGTGACTTGCA+AGG | + | chr1.4:68911317-68911336 | MS.gene21029:CDS | 40.0% |
! | AGCAAGTAGTGGTTGCTTTA+GGG | - | chr1.4:68911243-68911262 | None:intergenic | 40.0% |
! | AGCAGCTCTTTTTGTATCGA+CGG | + | chr1.4:68909836-68909855 | MS.gene21029:intron | 40.0% |
! | ATTGTGTATGGTGGAGATAG+TGG | + | chr1.4:68908934-68908953 | MS.gene21029:CDS | 40.0% |
! | CAATGACTATCTCTAGGAAC+AGG | - | chr1.4:68908889-68908908 | None:intergenic | 40.0% |
! | CTCCTGATTTTATGTTCTCC+GGG | - | chr1.4:68911308-68911327 | None:intergenic | 40.0% |
! | GATAGTGGTGATCAGTATCA+TGG | + | chr1.4:68908949-68908968 | MS.gene21029:CDS | 40.0% |
! | TAGATTGGTACCGAAGTTCT+TGG | + | chr1.4:68910915-68910934 | MS.gene21029:intron | 40.0% |
! | TGCTCCATTCCATTTTGTCA+AGG | - | chr1.4:68908531-68908550 | None:intergenic | 40.0% |
!! | CAAGGTTTGGCTTTAACACT+AGG | + | chr1.4:68911335-68911354 | MS.gene21029:CDS | 40.0% |
!! | GTTTGGCTTTAACACTAGGA+GGG | + | chr1.4:68911339-68911358 | MS.gene21029:CDS | 40.0% |
!! | TTGTCAAGTTGACAAGTGCT+TGG | - | chr1.4:68910609-68910628 | None:intergenic | 40.0% |
!!! | ATTTTTGGTGGTAGTGGAGA+AGG | + | chr1.4:68908778-68908797 | MS.gene21029:CDS | 40.0% |
!!! | CTAGTGATTTTTGGTGGTAG+TGG | + | chr1.4:68908772-68908791 | MS.gene21029:CDS | 40.0% |
!!! | GAAGCATTTGGTTTTTGACC+TGG | - | chr1.4:68910537-68910556 | None:intergenic | 40.0% |
ACAGCACTATGGCTATCTCT+AGG | - | chr1.4:68908583-68908602 | None:intergenic | 45.0% | |
ACTACAACAGGTGAAAAGCC+AGG | + | chr1.4:68908556-68908575 | MS.gene21029:CDS | 45.0% | |
AGTCACACTGCTACTCTTGT+TGG | + | chr1.4:68908739-68908758 | MS.gene21029:CDS | 45.0% | |
ATACATGGTCAACAGCCACA+AGG | + | chr1.4:68909721-68909740 | MS.gene21029:CDS | 45.0% | |
ATGGAGATGAATGCTGAGAC+AGG | - | chr1.4:68910491-68910510 | None:intergenic | 45.0% | |
CAGGAACTTCACAACAGAAG+AGG | + | chr1.4:68910403-68910422 | MS.gene21029:intron | 45.0% | |
CGACCGTCTCCAATCATAAA+AGG | + | chr1.4:68911263-68911282 | MS.gene21029:CDS | 45.0% | |
CGACCGTGTCAATTTGATTC+AGG | + | chr1.4:68910315-68910334 | MS.gene21029:CDS | 45.0% | |
CGGGAATAATGTGGAAGTCT+TGG | + | chr1.4:68910257-68910276 | MS.gene21029:CDS | 45.0% | |
GAAAAGAAGACCATCCTGGA+TGG | + | chr1.4:68910048-68910067 | MS.gene21029:CDS | 45.0% | |
GAACTTCACAACAGAAGAGG+AGG | + | chr1.4:68910406-68910425 | MS.gene21029:CDS | 45.0% | |
GGTGGTATCCCTTCACATTT+AGG | - | chr1.4:68908706-68908725 | None:intergenic | 45.0% | |
GTATACATCATTGGAGGGGT+CGG | + | chr1.4:68909631-68909650 | MS.gene21029:CDS | 45.0% | |
GTATGAGAAAACCGTCCTTG+TGG | - | chr1.4:68909739-68909758 | None:intergenic | 45.0% | |
GTCCTACAAGAACAGCACTA+TGG | - | chr1.4:68908594-68908613 | None:intergenic | 45.0% | |
GTCTTGGGAAAATGGGGTTA+TGG | + | chr1.4:68910273-68910292 | MS.gene21029:CDS | 45.0% | |
GTGGAAGTCTTGGGAAAATG+GGG | + | chr1.4:68910267-68910286 | MS.gene21029:CDS | 45.0% | |
TCTGATCAAGAACAGACTCC+AGG | + | chr1.4:68910516-68910535 | MS.gene21029:CDS | 45.0% | |
TGGAGATGAATGCTGAGACA+GGG | - | chr1.4:68910490-68910509 | None:intergenic | 45.0% | |
TGGAGCAAGGTTACTACAAC+AGG | + | chr1.4:68908544-68908563 | MS.gene21029:CDS | 45.0% | |
TGGCGGAGTAGATACAAACA+CGG | + | chr1.4:68910068-68910087 | MS.gene21029:CDS | 45.0% | |
TTATCGGGGTGCAAAGTCTT+CGG | + | chr1.4:68910009-68910028 | MS.gene21029:CDS | 45.0% | |
TTCAACATCCCACACCTTTG+TGG | - | chr1.4:68910442-68910461 | None:intergenic | 45.0% | |
TTCGCGTATCGGGAATAATG+TGG | + | chr1.4:68910248-68910267 | MS.gene21029:CDS | 45.0% | |
! | AATTGCTGCCACAAAGGTGT+GGG | + | chr1.4:68910431-68910450 | MS.gene21029:CDS | 45.0% |
! | AGCCATAGTGCTGTTCTTGT+AGG | + | chr1.4:68908589-68908608 | MS.gene21029:CDS | 45.0% |
! | CAATGACTTGGACTAGGGTA+TGG | + | chr1.4:68908998-68909017 | MS.gene21029:intron | 45.0% |
! | GAGATGGAGTTCTTTTCCTG+AGG | + | chr1.4:68908849-68908868 | MS.gene21029:CDS | 45.0% |
! | GAGCAAGTAGTGGTTGCTTT+AGG | - | chr1.4:68911244-68911263 | None:intergenic | 45.0% |
! | GTGAATGGGAGACTTTTCAG+AGG | + | chr1.4:68910984-68911003 | MS.gene21029:CDS | 45.0% |
! | TCCCGATACGCGAAATTTTC+TGG | - | chr1.4:68910242-68910261 | None:intergenic | 45.0% |
! | TGGCTGTATCCCAAGGTTTT+AGG | + | chr1.4:68907933-68907952 | MS.gene21029:CDS | 45.0% |
!! | GAATCCATGGCAGAAGCATT+TGG | - | chr1.4:68910549-68910568 | None:intergenic | 45.0% |
!! | GGTTTGGCTTTAACACTAGG+AGG | + | chr1.4:68911338-68911357 | MS.gene21029:CDS | 45.0% |
!! | TTCATGAGAGGCTGACTTGA+TGG | - | chr1.4:68911149-68911168 | None:intergenic | 45.0% |
!! | ATTAAAATATATATGAATTT+AGG | - | chr1.4:68909343-68909362 | None:intergenic | 5.0% |
!!! | ATTTGATTTAATTTAATTTT+AGG | + | chr1.4:68908462-68908481 | MS.gene21029:intron | 5.0% |
!!! | TTTGATTTAATTTAATTTTA+GGG | + | chr1.4:68908463-68908482 | MS.gene21029:intron | 5.0% |
AAGAAGACCATCCTGGATGG+CGG | + | chr1.4:68910051-68910070 | MS.gene21029:CDS | 50.0% | |
AAGGGATACCACCTTCACCA+AGG | + | chr1.4:68908713-68908732 | MS.gene21029:CDS | 50.0% | |
AAGGTTCTTCACCAGGAGTC+AGG | + | chr1.4:68909200-68909219 | MS.gene21029:CDS | 50.0% | |
ACCTGCTACAAGTCAGAGAC+TGG | - | chr1.4:68909912-68909931 | None:intergenic | 50.0% | |
ACGCGGATACACTCAACACT+TGG | + | chr1.4:68910785-68910804 | MS.gene21029:CDS | 50.0% | |
AGCAATGTGGCTGTATCCCA+AGG | + | chr1.4:68907926-68907945 | MS.gene21029:CDS | 50.0% | |
AGGGATACCACCTTCACCAA+GGG | + | chr1.4:68908714-68908733 | MS.gene21029:CDS | 50.0% | |
AGGTTCTTCACCAGGAGTCA+GGG | + | chr1.4:68909201-68909220 | MS.gene21029:CDS | 50.0% | |
ATGGTCAACAGCCACAAGGA+CGG | + | chr1.4:68909725-68909744 | MS.gene21029:CDS | 50.0% | |
CACACTGCTACTCTTGTTGG+TGG | + | chr1.4:68908742-68908761 | MS.gene21029:CDS | 50.0% | |
CGATATCGCCGAGTCAAACT+AGG | + | chr1.4:68910573-68910592 | MS.gene21029:CDS | 50.0% | |
GAATTGCTGCCACAAAGGTG+TGG | + | chr1.4:68910430-68910449 | MS.gene21029:CDS | 50.0% | |
GAGGAGAATTGCTGCCACAA+AGG | + | chr1.4:68910425-68910444 | MS.gene21029:CDS | 50.0% | |
GCGATATCGCTGAGAATCCA+TGG | - | chr1.4:68910562-68910581 | None:intergenic | 50.0% | |
GGCACATCACCTTTAACCTC+AGG | - | chr1.4:68908868-68908887 | None:intergenic | 50.0% | |
GGTCATGCAGCAGTGAATGT+TGG | + | chr1.4:68909226-68909245 | MS.gene21029:CDS | 50.0% | |
GTAGCAGTGTGACTTTCCCT+TGG | - | chr1.4:68908733-68908752 | None:intergenic | 50.0% | |
GTGTGACTTTCCCTTGGTGA+AGG | - | chr1.4:68908727-68908746 | None:intergenic | 50.0% | |
TGACTTTCCCTTGGTGAAGG+TGG | - | chr1.4:68908724-68908743 | None:intergenic | 50.0% | |
TTGTATCTACTCCGCCATCC+AGG | - | chr1.4:68910065-68910084 | None:intergenic | 50.0% | |
! | ATCGGTGTCTGCAACAACAG+CGG | - | chr1.4:68909761-68909780 | None:intergenic | 50.0% |
! | CAGGAGTGACTTGCAAGGTT+TGG | + | chr1.4:68911322-68911341 | MS.gene21029:CDS | 50.0% |
! | CTCTGACTTGTAGCAGGTGT+GGG | + | chr1.4:68909914-68909933 | MS.gene21029:intron | 50.0% |
! | CTTGCAGCAGAGCATCCAAA+TGG | + | chr1.4:68909976-68909995 | MS.gene21029:CDS | 50.0% |
! | GAGTGACCCCATCTTTGAGA+AGG | - | chr1.4:68907966-68907985 | None:intergenic | 50.0% |
! | TCTCTGACTTGTAGCAGGTG+TGG | + | chr1.4:68909913-68909932 | MS.gene21029:intron | 50.0% |
! | TCTGACTTGTAGCAGGTGTG+GGG | + | chr1.4:68909915-68909934 | MS.gene21029:intron | 50.0% |
!! | CAGGCTTCGGTTCTAAAGCT+TGG | - | chr1.4:68910761-68910780 | None:intergenic | 50.0% |
!! | CTATGGCTATCTCTAGGACC+TGG | - | chr1.4:68908577-68908596 | None:intergenic | 50.0% |
!! | GGTTGCTTTAGGGCATAGCA+CGG | - | chr1.4:68911233-68911252 | None:intergenic | 50.0% |
ATCTACTCCGCCATCCAGGA+TGG | - | chr1.4:68910061-68910080 | None:intergenic | 55.0% | |
GGTCACTCTGCTTGCTTCTC+TGG | + | chr1.4:68907978-68907997 | MS.gene21029:CDS | 55.0% | |
GTGTTGAGTGTATCCGCGTC+CGG | - | chr1.4:68910784-68910803 | None:intergenic | 55.0% | |
! | GCCAGTCTCTGACTTGTAGC+AGG | + | chr1.4:68909908-68909927 | MS.gene21029:intron | 55.0% |
!! | GCTTTAGAACCGAAGCCTGC+CGG | + | chr1.4:68910762-68910781 | MS.gene21029:CDS | 55.0% |
ACACTAGGAGGGCCTGCAAG+TGG | + | chr1.4:68911350-68911369 | MS.gene21029:CDS | 60.0% | |
GGAGACGGTCGAGCAAGTAG+TGG | - | chr1.4:68911254-68911273 | None:intergenic | 60.0% | |
TCTTCACCAGGAGTCAGGGC+AGG | + | chr1.4:68909205-68909224 | MS.gene21029:CDS | 60.0% | |
GCATGACCTGCCCTGACTCC+TGG | - | chr1.4:68909214-68909233 | None:intergenic | 65.0% | |
TATCCGCGTCCGGCAGGCTT+CGG | - | chr1.4:68910774-68910793 | None:intergenic | 65.0% | |
TGAGTGTATCCGCGTCCGGC+AGG | - | chr1.4:68910780-68910799 | None:intergenic | 65.0% | |
GAACCGAAGCCTGCCGGACG+CGG | + | chr1.4:68910768-68910787 | MS.gene21029:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 68907891 | 68911385 | 68907891 | ID=MS.gene21029 |
chr1.4 | mRNA | 68907891 | 68911385 | 68907891 | ID=MS.gene21029.t1;Parent=MS.gene21029 |
chr1.4 | exon | 68907891 | 68908022 | 68907891 | ID=MS.gene21029.t1.exon1;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68907891 | 68908022 | 68907891 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68908484 | 68909014 | 68908484 | ID=MS.gene21029.t1.exon2;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68908484 | 68909014 | 68908484 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68909190 | 68909255 | 68909190 | ID=MS.gene21029.t1.exon3;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68909190 | 68909255 | 68909190 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68909631 | 68909797 | 68909631 | ID=MS.gene21029.t1.exon4;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68909631 | 68909797 | 68909631 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68909930 | 68910089 | 68909930 | ID=MS.gene21029.t1.exon5;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68909930 | 68910089 | 68909930 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68910243 | 68910336 | 68910243 | ID=MS.gene21029.t1.exon6;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68910243 | 68910336 | 68910243 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68910406 | 68910806 | 68910406 | ID=MS.gene21029.t1.exon7;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68910406 | 68910806 | 68910406 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68910918 | 68911022 | 68910918 | ID=MS.gene21029.t1.exon8;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68910918 | 68911022 | 68910918 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
chr1.4 | exon | 68911113 | 68911385 | 68911113 | ID=MS.gene21029.t1.exon9;Parent=MS.gene21029.t1 |
chr1.4 | CDS | 68911113 | 68911385 | 68911113 | ID=cds.MS.gene21029.t1;Parent=MS.gene21029.t1 |
Gene Sequence |
Protein sequence |