Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21232.t1 | RHN81020.1 | 97.3 | 480 | 13 | 0 | 1 | 480 | 60 | 539 | 4.40E-268 | 933.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21232.t1 | Q9FZ24 | 47.2 | 451 | 228 | 5 | 29 | 469 | 69 | 519 | 4.1e-113 | 409.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21232.t1 | G7ICW4 | 97.3 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 3.2e-268 | 933.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene21232 | 0.823831 | 1.12E-53 | -1.69E-46 |
| MS.gene050885 | MS.gene21232 | 0.829211 | 5.84E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene21232 | 0.808035 | 3.78E-50 | -1.69E-46 |
| MS.gene052717 | MS.gene21232 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene21232 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene21232 | 0.810974 | 8.83E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene21232 | 0.802271 | 6.07E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene21232 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene21232 | 0.814899 | 1.22E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene21232 | 0.834323 | 3.20E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene21232 | 0.853366 | 2.51E-61 | -1.69E-46 |
| MS.gene05689 | MS.gene21232 | 0.869713 | 2.52E-66 | -1.69E-46 |
| MS.gene059901 | MS.gene21232 | -0.813556 | 2.41E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene21232 | 0.864892 | 8.76E-65 | -1.69E-46 |
| MS.gene060830 | MS.gene21232 | 0.839522 | 1.51E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21232 | MS.gene068115 | PPI |
| MS.gene068116 | MS.gene21232 | PPI |
| MS.gene21232 | MS.gene008872 | PPI |
| MS.gene21232 | MS.gene008863 | PPI |
| MS.gene21232 | MS.gene056432 | PPI |
| MS.gene21232 | MS.gene067938 | PPI |
| MS.gene21232 | MS.gene068108 | PPI |
| MS.gene21232 | MS.gene52807 | PPI |
| MS.gene21232 | MS.gene014383 | PPI |
| MS.gene21232 | MS.gene064795 | PPI |
| MS.gene21232 | MS.gene008871 | PPI |
| MS.gene21232 | MS.gene69362 | PPI |
| MS.gene21232 | MS.gene067932 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21232.t1 | MTR_1g086820 | 97.292 | 480 | 13 | 0 | 1 | 480 | 1 | 480 | 0.0 | 972 |
| MS.gene21232.t1 | MTR_8g069570 | 38.377 | 456 | 265 | 7 | 40 | 480 | 29 | 483 | 2.12e-93 | 292 |
| MS.gene21232.t1 | MTR_2g013450 | 30.176 | 454 | 303 | 8 | 29 | 471 | 26 | 476 | 2.27e-62 | 211 |
| MS.gene21232.t1 | MTR_8g007375 | 32.884 | 371 | 246 | 3 | 93 | 460 | 7 | 377 | 1.80e-58 | 198 |
| MS.gene21232.t1 | MTR_1g072300 | 30.839 | 441 | 289 | 9 | 20 | 450 | 25 | 459 | 2.66e-56 | 195 |
| MS.gene21232.t1 | MTR_2g047855 | 30.189 | 424 | 280 | 8 | 13 | 430 | 19 | 432 | 4.09e-56 | 194 |
| MS.gene21232.t1 | MTR_8g465890 | 30.425 | 424 | 281 | 6 | 14 | 431 | 16 | 431 | 3.09e-55 | 192 |
| MS.gene21232.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 26 | 459 | 9.16e-51 | 180 |
| MS.gene21232.t1 | MTR_3g099753 | 29.252 | 441 | 295 | 8 | 20 | 450 | 50 | 483 | 1.65e-50 | 180 |
| MS.gene21232.t1 | MTR_8g059115 | 28.696 | 345 | 244 | 2 | 100 | 442 | 13 | 357 | 4.26e-47 | 168 |
| MS.gene21232.t1 | MTR_2g090290 | 27.381 | 420 | 255 | 9 | 51 | 441 | 52 | 450 | 7.19e-42 | 155 |
| MS.gene21232.t1 | MTR_1g022400 | 30.241 | 291 | 199 | 4 | 46 | 332 | 69 | 359 | 2.10e-41 | 152 |
| MS.gene21232.t1 | MTR_8g031520 | 37.129 | 202 | 123 | 3 | 27 | 224 | 99 | 300 | 2.72e-31 | 122 |
| MS.gene21232.t1 | MTR_7g089770 | 23.810 | 399 | 286 | 12 | 38 | 430 | 163 | 549 | 2.19e-24 | 107 |
| MS.gene21232.t1 | MTR_1g050750 | 22.931 | 423 | 306 | 12 | 29 | 445 | 90 | 498 | 2.76e-22 | 100 |
| MS.gene21232.t1 | MTR_2g096880 | 23.197 | 319 | 241 | 4 | 17 | 333 | 30 | 346 | 8.27e-18 | 86.3 |
| MS.gene21232.t1 | MTR_8g098755 | 22.884 | 319 | 234 | 7 | 82 | 392 | 334 | 648 | 2.25e-12 | 69.7 |
| MS.gene21232.t1 | MTR_7g017530 | 29.213 | 178 | 122 | 3 | 130 | 304 | 283 | 459 | 1.57e-11 | 67.4 |
| MS.gene21232.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 520 | 828 | 6.04e-11 | 65.5 |
| MS.gene21232.t1 | MTR_8g080940 | 22.812 | 320 | 223 | 8 | 53 | 359 | 722 | 1030 | 9.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21232.t1 | AT1G02370 | 43.160 | 519 | 245 | 6 | 1 | 469 | 1 | 519 | 2.17e-145 | 427 |
| MS.gene21232.t1 | AT4G01990 | 43.542 | 480 | 249 | 8 | 11 | 469 | 6 | 484 | 2.41e-128 | 382 |
| MS.gene21232.t1 | AT1G60770 | 37.069 | 464 | 271 | 10 | 33 | 480 | 25 | 483 | 1.10e-89 | 282 |
| MS.gene21232.t1 | AT1G02150 | 34.259 | 432 | 279 | 4 | 33 | 459 | 69 | 500 | 1.29e-76 | 249 |
| MS.gene21232.t1 | AT4G21705 | 31.818 | 418 | 281 | 4 | 29 | 442 | 23 | 440 | 1.42e-68 | 227 |
| MS.gene21232.t1 | AT2G20710 | 29.540 | 413 | 284 | 5 | 32 | 441 | 39 | 447 | 1.12e-57 | 198 |
| MS.gene21232.t1 | AT4G02820 | 29.895 | 475 | 305 | 9 | 8 | 470 | 41 | 499 | 4.23e-55 | 192 |
| MS.gene21232.t1 | AT5G27460 | 29.070 | 430 | 290 | 6 | 12 | 431 | 21 | 445 | 5.67e-53 | 186 |
| MS.gene21232.t1 | AT5G09450 | 31.056 | 322 | 216 | 5 | 25 | 340 | 49 | 370 | 2.60e-48 | 171 |
| MS.gene21232.t1 | AT2G20710 | 29.942 | 344 | 235 | 4 | 100 | 441 | 13 | 352 | 5.56e-47 | 167 |
| MS.gene21232.t1 | AT1G28020 | 28.267 | 329 | 231 | 5 | 36 | 359 | 41 | 369 | 3.93e-32 | 129 |
| MS.gene21232.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene21232.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene21232.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene21232.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene21232.t1 | AT1G80270 | 26.523 | 279 | 197 | 7 | 19 | 294 | 118 | 391 | 4.25e-24 | 105 |
| MS.gene21232.t1 | AT1G15480 | 25.205 | 365 | 261 | 9 | 43 | 402 | 138 | 495 | 3.93e-23 | 103 |
| MS.gene21232.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene21232.t1 | AT3G15590 | 29.200 | 250 | 173 | 4 | 46 | 293 | 156 | 403 | 1.30e-22 | 101 |
| MS.gene21232.t1 | AT1G07590 | 24.633 | 341 | 251 | 5 | 27 | 365 | 64 | 400 | 2.39e-19 | 91.3 |
| MS.gene21232.t1 | AT3G11380 | 26.780 | 295 | 180 | 6 | 66 | 355 | 78 | 341 | 8.38e-18 | 86.7 |
| MS.gene21232.t1 | AT3G11380 | 34.722 | 144 | 90 | 4 | 57 | 196 | 372 | 515 | 4.56e-12 | 68.6 |
| MS.gene21232.t1 | AT1G28000 | 24.567 | 289 | 210 | 6 | 13 | 293 | 13 | 301 | 1.29e-15 | 79.0 |
| MS.gene21232.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene21232.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene21232.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene21232.t1 | AT5G21222 | 25.000 | 232 | 148 | 6 | 85 | 294 | 467 | 694 | 2.38e-12 | 70.1 |
| MS.gene21232.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene21232.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene21232.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene21232.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
| MS.gene21232.t1 | AT5G02860 | 24.299 | 321 | 221 | 11 | 63 | 365 | 128 | 444 | 6.32e-11 | 65.5 |
Find 115 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAGGTTTGCCTTCTTATT+TGG | 0.179522 | 1.2:+65258795 | None:intergenic |
| GGGCATAATAAAATTGTTTA+AGG | 0.218164 | 1.2:-65257063 | MS.gene21232:CDS |
| AATTACGGCCGTTTGATTTC+CGG | 0.228375 | 1.2:-65258870 | MS.gene21232:CDS |
| TTTGATAAGATGGATGAATT+AGG | 0.262779 | 1.2:-65257569 | MS.gene21232:CDS |
| ATGAGTTAAGCAAGATTCTT+AGG | 0.291614 | 1.2:-65256728 | MS.gene21232:CDS |
| GGCATGTTAGTTATGATTCT+AGG | 0.296691 | 1.2:-65257028 | MS.gene21232:CDS |
| CCATATCATTAAGCCTTCTA+AGG | 0.308417 | 1.2:+65257087 | None:intergenic |
| TTATGCTTTCTAACCTTAGA+AGG | 0.314226 | 1.2:-65257100 | MS.gene21232:CDS |
| CTTTCCCTTCGATTATATAC+TGG | 0.317101 | 1.2:+65258718 | None:intergenic |
| GCTGCAGAGGACCTTTCTTT+AGG | 0.319713 | 1.2:-65256923 | MS.gene21232:CDS |
| AGGACCTTTCTTTAGGATTC+GGG | 0.341722 | 1.2:-65256916 | MS.gene21232:CDS |
| GAGGACCTTTCTTTAGGATT+CGG | 0.351526 | 1.2:-65256917 | MS.gene21232:CDS |
| TAGGATTCGGGAAATGTTCA+TGG | 0.370256 | 1.2:-65256904 | MS.gene21232:CDS |
| CCTTAGAAGGCTTAATGATA+TGG | 0.371817 | 1.2:-65257087 | MS.gene21232:CDS |
| TTCTTGCTGAGCCTTTATGC+TGG | 0.387794 | 1.2:-65257203 | MS.gene21232:CDS |
| CATATACATAGACATCAAAT+TGG | 0.389303 | 1.2:+65257523 | None:intergenic |
| TTTATTGGAGAAAGGTCAAT+TGG | 0.391224 | 1.2:-65256877 | MS.gene21232:CDS |
| GGAAGCTGTGTCGGTCTTTG+AGG | 0.399258 | 1.2:-65256958 | MS.gene21232:CDS |
| GTTGGTTGGTGTTGCAGTGC+AGG | 0.407651 | 1.2:-65257006 | MS.gene21232:CDS |
| GTTACAAATTCTCGTGGGCT+TGG | 0.417988 | 1.2:+65256607 | None:intergenic |
| GAAGAAGAAACAGATCTTGA+TGG | 0.427741 | 1.2:-65256756 | MS.gene21232:CDS |
| AATAAAATTGTTTAAGGAGT+GGG | 0.433563 | 1.2:-65257057 | MS.gene21232:CDS |
| TGTTTAAGGAGTGGGAATCT+AGG | 0.433657 | 1.2:-65257049 | MS.gene21232:CDS |
| TGGTGCTATGAGCCACTTAG+AGG | 0.441022 | 1.2:-65256853 | MS.gene21232:CDS |
| CATTACCAGTCCCAGCATAA+AGG | 0.447077 | 1.2:+65257192 | None:intergenic |
| TCAGTTGGTTAATGTTATGA+AGG | 0.448455 | 1.2:-65257474 | MS.gene21232:CDS |
| TCTTGCTGAGCCTTTATGCT+GGG | 0.452519 | 1.2:-65257202 | MS.gene21232:CDS |
| GATAGCTCCGATTGGTCACC+GGG | 0.462784 | 1.2:+65257126 | None:intergenic |
| CATAAAGGCTCAGCAAGAAA+TGG | 0.465952 | 1.2:+65257207 | None:intergenic |
| TTAAAGAGGTTTATAGAGTG+TGG | 0.469721 | 1.2:-65257169 | MS.gene21232:CDS |
| ATTTGATGTCTATGTATATG+AGG | 0.470560 | 1.2:-65257520 | MS.gene21232:CDS |
| CGTCTGCGACACGGTTCCTC+CGG | 0.470565 | 1.2:+65258746 | None:intergenic |
| TTTCTAGGTCGGCTAGTCTT+CGG | 0.471475 | 1.2:+65258772 | None:intergenic |
| GCACTTACAGCTTGTGGTGA+AGG | 0.473435 | 1.2:+65256795 | None:intergenic |
| TGGTATTCATACAGTATTGA+AGG | 0.474569 | 1.2:-65256646 | MS.gene21232:CDS |
| TATGTGTACTTGTTCTTAGC+AGG | 0.476882 | 1.2:+65257650 | None:intergenic |
| GTTTGATTTCCGGCGGAGGA+AGG | 0.482051 | 1.2:-65258860 | MS.gene21232:CDS |
| AGAGACTCTGAGATGAATTA+CGG | 0.482119 | 1.2:-65258885 | None:intergenic |
| TAAAGAGGTTTATAGAGTGT+GGG | 0.486756 | 1.2:-65257168 | MS.gene21232:CDS |
| CTGAGCCTTTATGCTGGGAC+TGG | 0.488058 | 1.2:-65257197 | MS.gene21232:CDS |
| AGTTATGATTCTAGGTTGGT+TGG | 0.491947 | 1.2:-65257020 | MS.gene21232:CDS |
| ATAATCGAAGGGAAAGCCTT+AGG | 0.492451 | 1.2:-65258711 | MS.gene21232:CDS |
| TTCAACCACTCCTTTCACTT+TGG | 0.493231 | 1.2:+65257703 | None:intergenic |
| TACGATACTTTCGAAGCTCC+TGG | 0.493561 | 1.2:+65258664 | None:intergenic |
| CACCGGGGTGATCTTCTTGA+GGG | 0.494822 | 1.2:+65257142 | None:intergenic |
| TGTGCTGCTTTGAATGACCT+TGG | 0.495240 | 1.2:-65257401 | MS.gene21232:CDS |
| ATGAATACCAGGAGATGATT+CGG | 0.497054 | 1.2:+65256659 | None:intergenic |
| GGCCGTTTGATTTCCGGCGG+AGG | 0.498441 | 1.2:-65258864 | MS.gene21232:CDS |
| TCGGAGAAGCCTTCCTCCGC+CGG | 0.500205 | 1.2:+65258851 | None:intergenic |
| AGATCACCCCGGTGACCAAT+CGG | 0.504230 | 1.2:-65257133 | MS.gene21232:CDS |
| TGAACTCGAGAGATGCGTCC+AGG | 0.504375 | 1.2:-65258682 | MS.gene21232:CDS |
| GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1.2:-65257302 | MS.gene21232:CDS |
| TTCCTCCGCCGGAAATCAAA+CGG | 0.507328 | 1.2:+65258862 | None:intergenic |
| GGTCGGCTAGTCTTCGGTAA+AGG | 0.515798 | 1.2:+65258778 | None:intergenic |
| TGAGGTTGAACGTGTTTATG+AGG | 0.516026 | 1.2:-65257378 | MS.gene21232:CDS |
| TGTTAGTTATGATTCTAGGT+TGG | 0.519722 | 1.2:-65257024 | MS.gene21232:CDS |
| AAGATGAAGACAAAATTGAC+TGG | 0.525053 | 1.2:-65257343 | MS.gene21232:CDS |
| TACTTGTTCTTAGCAGGAGG+AGG | 0.531968 | 1.2:+65257656 | None:intergenic |
| TGGGACTGGTAATGTTAAAG+AGG | 0.532622 | 1.2:-65257183 | MS.gene21232:CDS |
| AGATAGCTCCGATTGGTCAC+CGG | 0.533726 | 1.2:+65257125 | None:intergenic |
| ATTTCCCGAATCCTAAAGAA+AGG | 0.537745 | 1.2:+65256912 | None:intergenic |
| TGCTTTGAATGACCTTGGTG+AGG | 0.538207 | 1.2:-65257396 | MS.gene21232:CDS |
| TCACCGGGGTGATCTTCTTG+AGG | 0.539174 | 1.2:+65257141 | None:intergenic |
| TTGGAGAAAGGTCAATTGGA+TGG | 0.539563 | 1.2:-65256873 | MS.gene21232:CDS |
| AGAAAAGCACTTACAGCTTG+TGG | 0.542366 | 1.2:+65256789 | None:intergenic |
| AAAGAGGTTTATAGAGTGTG+GGG | 0.547043 | 1.2:-65257167 | MS.gene21232:CDS |
| GAAGCTCTCAAGAGCTGCAG+AGG | 0.547848 | 1.2:-65256936 | MS.gene21232:CDS |
| AGCTGAGCTTCCAAATAAGA+AGG | 0.548369 | 1.2:-65258805 | MS.gene21232:CDS |
| GATCTTGTGTCCAAAGTGAA+AGG | 0.549809 | 1.2:-65257713 | MS.gene21232:CDS |
| ACTGCATCCGAATCATCTCC+TGG | 0.552993 | 1.2:-65256666 | MS.gene21232:CDS |
| AGAAATGGTAAGTTTCGCGT+TGG | 0.553517 | 1.2:+65257222 | None:intergenic |
| TTACAGCTTGTGGTGAAGGT+TGG | 0.556374 | 1.2:+65256799 | None:intergenic |
| TAATAAAATTGTTTAAGGAG+TGG | 0.559489 | 1.2:-65257058 | MS.gene21232:CDS |
| TTCAATACTGTATGAATACC+AGG | 0.559830 | 1.2:+65256648 | None:intergenic |
| TCCCAAGTTACAAATTCTCG+TGG | 0.560694 | 1.2:+65256601 | None:intergenic |
| TTGAACCAGTATATAATCGA+AGG | 0.561352 | 1.2:-65258723 | MS.gene21232:CDS |
| ATTGGTTGCAGATAATGGAA+TGG | 0.561950 | 1.2:-65257787 | MS.gene21232:intron |
| AGCTGAGTTGATGCTTAAGA+AGG | 0.568467 | 1.2:-65257267 | MS.gene21232:CDS |
| TGGTAAGTTTCGCGTTGGCG+CGG | 0.569478 | 1.2:+65257227 | None:intergenic |
| CTGAAAGTGCGGCCTCTAAG+TGG | 0.571070 | 1.2:+65256841 | None:intergenic |
| ATGTCTATGTATATGAGGCT+AGG | 0.571867 | 1.2:-65257515 | MS.gene21232:CDS |
| TAGATTCCATCATGCATTCG+AGG | 0.573744 | 1.2:-65258643 | MS.gene21232:intron |
| CATGGACAAGGAAGCTGTGT+CGG | 0.574022 | 1.2:-65256967 | MS.gene21232:CDS |
| CTGGTTCAACGTCTGCGACA+CGG | 0.577943 | 1.2:+65258737 | None:intergenic |
| ACCGTCGAAAGTTCCTCAGT+TGG | 0.578763 | 1.2:-65257489 | MS.gene21232:CDS |
| ACGACTATGCACGGCTGCGA+CGG | 0.581337 | 1.2:-65258829 | MS.gene21232:CDS |
| TAGAAGGCTTAATGATATGG+AGG | 0.581977 | 1.2:-65257084 | MS.gene21232:CDS |
| GAGGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1.2:-65256834 | MS.gene21232:CDS |
| ACCAACTGAGGAACTTTCGA+CGG | 0.585028 | 1.2:+65257488 | None:intergenic |
| CATAATAAGATAGCTCCGAT+TGG | 0.585163 | 1.2:+65257118 | None:intergenic |
| GCGATACCTCGAATGCATGA+TGG | 0.585983 | 1.2:+65258637 | None:intergenic |
| GTGTACTTGTTCTTAGCAGG+AGG | 0.589015 | 1.2:+65257653 | None:intergenic |
| TGGTTAATGTTATGAAGGAG+AGG | 0.593769 | 1.2:-65257469 | MS.gene21232:CDS |
| TTCATAACATTAACCAACTG+AGG | 0.600464 | 1.2:+65257476 | None:intergenic |
| AGAAGGCTTAATGATATGGA+GGG | 0.604451 | 1.2:-65257083 | MS.gene21232:CDS |
| GCTAAGAACAAGTACACATA+CGG | 0.606065 | 1.2:-65257647 | MS.gene21232:CDS |
| TCTTCTAAACTGTTACTGCA+AGG | 0.614146 | 1.2:-65257621 | MS.gene21232:CDS |
| TACGGCCGTTTGATTTCCGG+CGG | 0.616646 | 1.2:-65258867 | MS.gene21232:CDS |
| GGCTTACTTGAGTCAAAACA+TGG | 0.616784 | 1.2:-65256985 | MS.gene21232:CDS |
| CCCAAGTTACAAATTCTCGT+GGG | 0.622015 | 1.2:+65256602 | None:intergenic |
| CTTGAGTCAAAACATGGACA+AGG | 0.623542 | 1.2:-65256979 | MS.gene21232:CDS |
| AAGAGGTTTATAGAGTGTGG+GGG | 0.627275 | 1.2:-65257166 | MS.gene21232:CDS |
| TGAACCAGTATATAATCGAA+GGG | 0.630767 | 1.2:-65258722 | MS.gene21232:CDS |
| TCGCAGCCGTGCATAGTCGT+CGG | 0.630947 | 1.2:+65258832 | None:intergenic |
| CTAGCCGACCTAGAAAAGAC+CGG | 0.635101 | 1.2:-65258765 | MS.gene21232:CDS |
| TGAGTTGATGCTTAAGAAGG+TGG | 0.644162 | 1.2:-65257264 | MS.gene21232:CDS |
| TAATGGAATGGATGATGATG+AGG | 0.652324 | 1.2:-65257775 | MS.gene21232:CDS |
| CAAGGAACTAATGCTAGACA+AGG | 0.652550 | 1.2:-65257603 | MS.gene21232:CDS |
| GACCCTCAAGAAGATCACCC+CGG | 0.654594 | 1.2:-65257144 | MS.gene21232:CDS |
| ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1.2:+65256830 | None:intergenic |
| GCTTCTCCGACGACTATGCA+CGG | 0.690136 | 1.2:-65258838 | MS.gene21232:CDS |
| GCCGACCTAGAAAAGACCGG+AGG | 0.743237 | 1.2:-65258762 | MS.gene21232:CDS |
| TGTGTCCAAAGTGAAAGGAG+TGG | 0.764655 | 1.2:-65257708 | MS.gene21232:CDS |
| AAACACGTTCAACCTCACCA+AGG | 0.766259 | 1.2:+65257384 | None:intergenic |
| ATAGCTCCGATTGGTCACCG+GGG | 0.806286 | 1.2:+65257127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATGATGTTTTGAT+TGG | - | chr1.2:65257676-65257695 | MS.gene21232:CDS | 15.0% |
| !! | AATAAAATTGTTTAAGGAGT+GGG | - | chr1.2:65258424-65258443 | MS.gene21232:intron | 20.0% |
| !! | AGATTTAAAGATTAACAAGT+TGG | - | chr1.2:65257524-65257543 | MS.gene21232:CDS | 20.0% |
| !! | TAATAAAATTGTTTAAGGAG+TGG | - | chr1.2:65258423-65258442 | MS.gene21232:intron | 20.0% |
| !! | TCAACATGAATCAAAATTTA+GGG | + | chr1.2:65256892-65256911 | None:intergenic | 20.0% |
| !! | TTGTTAATAAATGAATCAAC+TGG | - | chr1.2:65257143-65257162 | MS.gene21232:CDS | 20.0% |
| ! | AAAATTAGTTAGAGTCGTTT+AGG | + | chr1.2:65256989-65257008 | None:intergenic | 25.0% |
| ! | ACTAATTATGTTCTGTGTAA+TGG | - | chr1.2:65257107-65257126 | MS.gene21232:CDS | 25.0% |
| ! | ATTTGATGTCTATGTATATG+AGG | - | chr1.2:65257961-65257980 | MS.gene21232:intron | 25.0% |
| ! | CATATACATAGACATCAAAT+TGG | + | chr1.2:65257961-65257980 | None:intergenic | 25.0% |
| ! | CTCAACATGAATCAAAATTT+AGG | + | chr1.2:65256893-65256912 | None:intergenic | 25.0% |
| ! | GGGCATAATAAAATTGTTTA+AGG | - | chr1.2:65258418-65258437 | MS.gene21232:intron | 25.0% |
| ! | TAGTATATGATAGAACACTA+TGG | - | chr1.2:65257556-65257575 | MS.gene21232:CDS | 25.0% |
| ! | TTATATAGTAGTCACAAGAT+CGG | - | chr1.2:65257208-65257227 | MS.gene21232:CDS | 25.0% |
| ! | TTTGATAAGATGGATGAATT+AGG | - | chr1.2:65257912-65257931 | MS.gene21232:intron | 25.0% |
| !! | AAAGATTAACAAGTTGGATA+GGG | - | chr1.2:65257530-65257549 | MS.gene21232:CDS | 25.0% |
| !! | AAATTTAGGGTGGAAAAAAT+TGG | + | chr1.2:65256879-65256898 | None:intergenic | 25.0% |
| !! | CTGAATTTACATACATTTTG+TGG | - | chr1.2:65258048-65258067 | MS.gene21232:intron | 25.0% |
| !! | GAGGCAAATTAATTTTTCAT+GGG | - | chr1.2:65257725-65257744 | MS.gene21232:CDS | 25.0% |
| !! | TAAAGATTAACAAGTTGGAT+AGG | - | chr1.2:65257529-65257548 | MS.gene21232:CDS | 25.0% |
| !! | TGAGGCAAATTAATTTTTCA+TGG | - | chr1.2:65257724-65257743 | MS.gene21232:CDS | 25.0% |
| !!! | AATGTTCATGGTGTTTTTAT+TGG | - | chr1.2:65258589-65258608 | MS.gene21232:intron | 25.0% |
| !!! | AGTAATGCAAGTTTTAATAG+AGG | + | chr1.2:65258798-65258817 | None:intergenic | 25.0% |
| !!! | ATTGTCTCATTTTGATAAGA+TGG | - | chr1.2:65257902-65257921 | MS.gene21232:intron | 25.0% |
| !!! | TTTACCATCTTTTTTACGAT+AGG | + | chr1.2:65257366-65257385 | None:intergenic | 25.0% |
| AAGATGAAGACAAAATTGAC+TGG | - | chr1.2:65258138-65258157 | MS.gene21232:intron | 30.0% | |
| ACATGAATCAAAATTTAGGG+TGG | + | chr1.2:65256889-65256908 | None:intergenic | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr1.2:65257333-65257352 | MS.gene21232:CDS | 30.0% | |
| ATGAGTTAAGCAAGATTCTT+AGG | - | chr1.2:65258753-65258772 | MS.gene21232:CDS | 30.0% | |
| TAAAGAGGTTTATAGAGTGT+GGG | - | chr1.2:65258313-65258332 | MS.gene21232:intron | 30.0% | |
| TAAAGGTTTGCCTTCTTATT+TGG | + | chr1.2:65256689-65256708 | None:intergenic | 30.0% | |
| TCAGTTGGTTAATGTTATGA+AGG | - | chr1.2:65258007-65258026 | MS.gene21232:intron | 30.0% | |
| TGAACCAGTATATAATCGAA+GGG | - | chr1.2:65256759-65256778 | MS.gene21232:CDS | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr1.2:65257334-65257353 | MS.gene21232:CDS | 30.0% | |
| TGATGATAAACTATGAAGCA+TGG | + | chr1.2:65257067-65257086 | None:intergenic | 30.0% | |
| TGTTAGTTATGATTCTAGGT+TGG | - | chr1.2:65258457-65258476 | MS.gene21232:intron | 30.0% | |
| TTAAAGAGGTTTATAGAGTG+TGG | - | chr1.2:65258312-65258331 | MS.gene21232:intron | 30.0% | |
| TTATGCTTTCTAACCTTAGA+AGG | - | chr1.2:65258381-65258400 | MS.gene21232:intron | 30.0% | |
| TTCAATACTGTATGAATACC+AGG | + | chr1.2:65258836-65258855 | None:intergenic | 30.0% | |
| TTCATAACATTAACCAACTG+AGG | + | chr1.2:65258008-65258027 | None:intergenic | 30.0% | |
| TTGAACCAGTATATAATCGA+AGG | - | chr1.2:65256758-65256777 | MS.gene21232:CDS | 30.0% | |
| TTTATTGGAGAAAGGTCAAT+TGG | - | chr1.2:65258604-65258623 | MS.gene21232:intron | 30.0% | |
| ! | ACATACATTTTGTGGATGAA+TGG | - | chr1.2:65258056-65258075 | MS.gene21232:intron | 30.0% |
| ! | AGATGGTAAAAGTTTGACTT+AGG | - | chr1.2:65257376-65257395 | MS.gene21232:CDS | 30.0% |
| ! | CTTTTATATAGATAGCAGCA+AGG | + | chr1.2:65258178-65258197 | None:intergenic | 30.0% |
| ! | TGGTATTCATACAGTATTGA+AGG | - | chr1.2:65258835-65258854 | MS.gene21232:CDS | 30.0% |
| !! | ATGGTGTTTTTATTGGAGAA+AGG | - | chr1.2:65258596-65258615 | MS.gene21232:intron | 30.0% |
| !! | TTTTGATTGGTTGCAGATAA+TGG | - | chr1.2:65257689-65257708 | MS.gene21232:CDS | 30.0% |
| !!! | AATTAGTTTTGCCTTGTCTA+TGG | + | chr1.2:65257094-65257113 | None:intergenic | 30.0% |
| !!! | CGCTTATTTTATTCTCATGT+TGG | + | chr1.2:65257260-65257279 | None:intergenic | 30.0% |
| AAAGAGGTTTATAGAGTGTG+GGG | - | chr1.2:65258314-65258333 | MS.gene21232:intron | 35.0% | |
| AGAAGGCTTAATGATATGGA+GGG | - | chr1.2:65258398-65258417 | MS.gene21232:intron | 35.0% | |
| AGCACCTATCGTAAAAAAGA+TGG | - | chr1.2:65257359-65257378 | MS.gene21232:CDS | 35.0% | |
| ATCATCACAATCCATAGACA+AGG | - | chr1.2:65257080-65257099 | MS.gene21232:CDS | 35.0% | |
| ATGAATACCAGGAGATGATT+CGG | + | chr1.2:65258825-65258844 | None:intergenic | 35.0% | |
| ATGTCTATGTATATGAGGCT+AGG | - | chr1.2:65257966-65257985 | MS.gene21232:intron | 35.0% | |
| ATTTCCCGAATCCTAAAGAA+AGG | + | chr1.2:65258572-65258591 | None:intergenic | 35.0% | |
| CATAATAAGATAGCTCCGAT+TGG | + | chr1.2:65258366-65258385 | None:intergenic | 35.0% | |
| CCATATCATTAAGCCTTCTA+AGG | + | chr1.2:65258397-65258416 | None:intergenic | 35.0% | |
| CCTTAGAAGGCTTAATGATA+TGG | - | chr1.2:65258394-65258413 | MS.gene21232:intron | 35.0% | |
| CTTTCCCTTCGATTATATAC+TGG | + | chr1.2:65256766-65256785 | None:intergenic | 35.0% | |
| GAAGAAGAAACAGATCTTGA+TGG | - | chr1.2:65258725-65258744 | MS.gene21232:CDS | 35.0% | |
| GCTAAGAACAAGTACACATA+CGG | - | chr1.2:65257834-65257853 | MS.gene21232:intron | 35.0% | |
| GCTGCTATCTATATAAAAGC+TGG | - | chr1.2:65258179-65258198 | MS.gene21232:intron | 35.0% | |
| GGCATGTTAGTTATGATTCT+AGG | - | chr1.2:65258453-65258472 | MS.gene21232:intron | 35.0% | |
| TAGAAGGCTTAATGATATGG+AGG | - | chr1.2:65258397-65258416 | MS.gene21232:intron | 35.0% | |
| TATGTGTACTTGTTCTTAGC+AGG | + | chr1.2:65257834-65257853 | None:intergenic | 35.0% | |
| TCTTCTAAACTGTTACTGCA+AGG | - | chr1.2:65257860-65257879 | MS.gene21232:intron | 35.0% | |
| TGGTTAATGTTATGAAGGAG+AGG | - | chr1.2:65258012-65258031 | MS.gene21232:intron | 35.0% | |
| ! | AAATGAATCAACTGGCTTAG+TGG | - | chr1.2:65257151-65257170 | MS.gene21232:CDS | 35.0% |
| ! | CAAGTCTTATCCCACTAATT+GGG | + | chr1.2:65257606-65257625 | None:intergenic | 35.0% |
| ! | GACCTGTAGATTTTGTAGTA+CGG | - | chr1.2:65257421-65257440 | MS.gene21232:CDS | 35.0% |
| ! | TAATGGAATGGATGATGATG+AGG | - | chr1.2:65257706-65257725 | MS.gene21232:CDS | 35.0% |
| ! | TGGTAAAAGTTTGACTTAGG+TGG | - | chr1.2:65257379-65257398 | MS.gene21232:CDS | 35.0% |
| !! | AGTTATGATTCTAGGTTGGT+TGG | - | chr1.2:65258461-65258480 | MS.gene21232:intron | 35.0% |
| !! | ATTGGTTGCAGATAATGGAA+TGG | - | chr1.2:65257694-65257713 | MS.gene21232:CDS | 35.0% |
| AAGAGGTTTATAGAGTGTGG+GGG | - | chr1.2:65258315-65258334 | MS.gene21232:intron | 40.0% | |
| ACAAGATCGGTGATGTTGTA+TGG | - | chr1.2:65257221-65257240 | MS.gene21232:CDS | 40.0% | |
| AGAAATGGTAAGTTTCGCGT+TGG | + | chr1.2:65258262-65258281 | None:intergenic | 40.0% | |
| AGCTGAGCTTCCAAATAAGA+AGG | - | chr1.2:65256676-65256695 | MS.gene21232:CDS | 40.0% | |
| ATAATCGAAGGGAAAGCCTT+AGG | - | chr1.2:65256770-65256789 | MS.gene21232:CDS | 40.0% | |
| CAAGGAACTAATGCTAGACA+AGG | - | chr1.2:65257878-65257897 | MS.gene21232:intron | 40.0% | |
| CATAAAGGCTCAGCAAGAAA+TGG | + | chr1.2:65258277-65258296 | None:intergenic | 40.0% | |
| CCAATTAGTGGGATAAGACT+TGG | - | chr1.2:65257604-65257623 | MS.gene21232:CDS | 40.0% | |
| CTCCGTACTACAAAATCTAC+AGG | + | chr1.2:65257426-65257445 | None:intergenic | 40.0% | |
| CTTATCCCACTAATTGGGAT+CGG | + | chr1.2:65257601-65257620 | None:intergenic | 40.0% | |
| CTTGAGTCAAAACATGGACA+AGG | - | chr1.2:65258502-65258521 | MS.gene21232:intron | 40.0% | |
| GATCTTGTGTCCAAAGTGAA+AGG | - | chr1.2:65257768-65257787 | MS.gene21232:CDS | 40.0% | |
| GGCTTACTTGAGTCAAAACA+TGG | - | chr1.2:65258496-65258515 | MS.gene21232:intron | 40.0% | |
| TAGATTCCATCATGCATTCG+AGG | - | chr1.2:65256838-65256857 | MS.gene21232:CDS | 40.0% | |
| TAGGATTCGGGAAATGTTCA+TGG | - | chr1.2:65258577-65258596 | MS.gene21232:intron | 40.0% | |
| TGAGGTTGAACGTGTTTATG+AGG | - | chr1.2:65258103-65258122 | MS.gene21232:intron | 40.0% | |
| TGATTTGACTAACCTCCATC+TGG | + | chr1.2:65257455-65257474 | None:intergenic | 40.0% | |
| TGTTTAAGGAGTGGGAATCT+AGG | - | chr1.2:65258432-65258451 | MS.gene21232:intron | 40.0% | |
| TTCAACCACTCCTTTCACTT+TGG | + | chr1.2:65257781-65257800 | None:intergenic | 40.0% | |
| TTGGAGAAAGGTCAATTGGA+TGG | - | chr1.2:65258608-65258627 | MS.gene21232:intron | 40.0% | |
| ! | AAAGTACCACTCAAGCTGAA+GGG | - | chr1.2:65257181-65257200 | MS.gene21232:CDS | 40.0% |
| ! | AAGTTTGACTTAGGTGGTCT+AGG | - | chr1.2:65257385-65257404 | MS.gene21232:CDS | 40.0% |
| ! | AATTACGGCCGTTTGATTTC+CGG | - | chr1.2:65256611-65256630 | MS.gene21232:CDS | 40.0% |
| ! | CCAAGTCTTATCCCACTAAT+TGG | + | chr1.2:65257607-65257626 | None:intergenic | 40.0% |
| ! | CTCGAGTTCATCTTTTCCTA+AGG | + | chr1.2:65256789-65256808 | None:intergenic | 40.0% |
| ! | GAGGTTAGTCAAATCACTTG+AGG | - | chr1.2:65257459-65257478 | MS.gene21232:CDS | 40.0% |
| ! | TAAAGTACCACTCAAGCTGA+AGG | - | chr1.2:65257180-65257199 | MS.gene21232:CDS | 40.0% |
| ! | TGGGACTGGTAATGTTAAAG+AGG | - | chr1.2:65258298-65258317 | MS.gene21232:intron | 40.0% |
| !! | AGAAAAGCACTTACAGCTTG+TGG | + | chr1.2:65258695-65258714 | None:intergenic | 40.0% |
| !! | AGCTGAGTTGATGCTTAAGA+AGG | - | chr1.2:65258214-65258233 | MS.gene21232:intron | 40.0% |
| !! | AGGACCTTTCTTTAGGATTC+GGG | - | chr1.2:65258565-65258584 | MS.gene21232:intron | 40.0% |
| !! | GAGGACCTTTCTTTAGGATT+CGG | - | chr1.2:65258564-65258583 | MS.gene21232:intron | 40.0% |
| !! | GTAACATCGACTCTGATTGA+AGG | - | chr1.2:65256928-65256947 | MS.gene21232:CDS | 40.0% |
| !! | TGAGTTGATGCTTAAGAAGG+TGG | - | chr1.2:65258217-65258236 | MS.gene21232:intron | 40.0% |
| AAACACGTTCAACCTCACCA+AGG | + | chr1.2:65258100-65258119 | None:intergenic | 45.0% | |
| AATTGTCCCTTCAGCTTGAG+TGG | + | chr1.2:65257190-65257209 | None:intergenic | 45.0% | |
| ACCAACTGAGGAACTTTCGA+CGG | + | chr1.2:65257996-65258015 | None:intergenic | 45.0% | |
| ACTAATTGGGATCGGCTACA+TGG | + | chr1.2:65257593-65257612 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | - | chr1.2:65257291-65257310 | MS.gene21232:CDS | 45.0% | |
| AGTCAAATCACTTGAGGCAG+AGG | - | chr1.2:65257465-65257484 | MS.gene21232:CDS | 45.0% | |
| ATGTAGCCGATCCCAATTAG+TGG | - | chr1.2:65257592-65257611 | MS.gene21232:CDS | 45.0% | |
| CATTACCAGTCCCAGCATAA+AGG | + | chr1.2:65258292-65258311 | None:intergenic | 45.0% | |
| GTGTACTTGTTCTTAGCAGG+AGG | + | chr1.2:65257831-65257850 | None:intergenic | 45.0% | |
| TACGATACTTTCGAAGCTCC+TGG | + | chr1.2:65256820-65256839 | None:intergenic | 45.0% | |
| TACTTGTTCTTAGCAGGAGG+AGG | + | chr1.2:65257828-65257847 | None:intergenic | 45.0% | |
| TCTTGCTGAGCCTTTATGCT+GGG | - | chr1.2:65258279-65258298 | MS.gene21232:intron | 45.0% | |
| TGTAGCCGATCCCAATTAGT+GGG | - | chr1.2:65257593-65257612 | MS.gene21232:CDS | 45.0% | |
| TGTGTCCAAAGTGAAAGGAG+TGG | - | chr1.2:65257773-65257792 | MS.gene21232:CDS | 45.0% | |
| TTACAGCTTGTGGTGAAGGT+TGG | + | chr1.2:65258685-65258704 | None:intergenic | 45.0% | |
| TTCTTGCTGAGCCTTTATGC+TGG | - | chr1.2:65258278-65258297 | MS.gene21232:intron | 45.0% | |
| ! | AGTGGGATAAGACTTGGTTG+TGG | - | chr1.2:65257610-65257629 | MS.gene21232:CDS | 45.0% |
| ! | TGCTTTGAATGACCTTGGTG+AGG | - | chr1.2:65258085-65258104 | MS.gene21232:intron | 45.0% |
| !! | TGTGCTGCTTTGAATGACCT+TGG | - | chr1.2:65258080-65258099 | MS.gene21232:intron | 45.0% |
| !! | TTTCTAGGTCGGCTAGTCTT+CGG | + | chr1.2:65256712-65256731 | None:intergenic | 45.0% |
| AAATAAGCGTAGCCGAGACG+AGG | - | chr1.2:65257271-65257290 | MS.gene21232:CDS | 50.0% | |
| ACCGTCGAAAGTTCCTCAGT+TGG | - | chr1.2:65257992-65258011 | MS.gene21232:intron | 50.0% | |
| ACTGCATCCGAATCATCTCC+TGG | - | chr1.2:65258815-65258834 | MS.gene21232:CDS | 50.0% | |
| AGTACGGAGAGTAGACCAGA+TGG | - | chr1.2:65257437-65257456 | MS.gene21232:CDS | 50.0% | |
| CATGGACAAGGAAGCTGTGT+CGG | - | chr1.2:65258514-65258533 | MS.gene21232:intron | 50.0% | |
| CCAACACAACATCCTCGTCT+CGG | + | chr1.2:65257286-65257305 | None:intergenic | 50.0% | |
| CTAGCCGACCTAGAAAAGAC+CGG | - | chr1.2:65256716-65256735 | MS.gene21232:CDS | 50.0% | |
| GCACTTACAGCTTGTGGTGA+AGG | + | chr1.2:65258689-65258708 | None:intergenic | 50.0% | |
| GCGATACCTCGAATGCATGA+TGG | + | chr1.2:65256847-65256866 | None:intergenic | 50.0% | |
| GCTGCAGAGGACCTTTCTTT+AGG | - | chr1.2:65258558-65258577 | MS.gene21232:intron | 50.0% | |
| GTCGTTTAGGTGTCAGACAC+CGG | + | chr1.2:65256976-65256995 | None:intergenic | 50.0% | |
| TTCCTCCGCCGGAAATCAAA+CGG | + | chr1.2:65256622-65256641 | None:intergenic | 50.0% | |
| ! | AGATAGCTCCGATTGGTCAC+CGG | + | chr1.2:65258359-65258378 | None:intergenic | 50.0% |
| ! | TCCTCCGGTCTTTTCTAGGT+CGG | + | chr1.2:65256723-65256742 | None:intergenic | 50.0% |
| !! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1.2:65258654-65258673 | None:intergenic | 50.0% |
| !! | TGGTGCTATGAGCCACTTAG+AGG | - | chr1.2:65258628-65258647 | MS.gene21232:intron | 50.0% |
| ACGGAGAGTAGACCAGATGG+AGG | - | chr1.2:65257440-65257459 | MS.gene21232:CDS | 55.0% | |
| AGATCACCCCGGTGACCAAT+CGG | - | chr1.2:65258348-65258367 | MS.gene21232:intron | 55.0% | |
| CACCGGGGTGATCTTCTTGA+GGG | + | chr1.2:65258342-65258361 | None:intergenic | 55.0% | |
| CCGAGACGAGGATGTTGTGT+TGG | - | chr1.2:65257283-65257302 | MS.gene21232:CDS | 55.0% | |
| CTGAGCCTTTATGCTGGGAC+TGG | - | chr1.2:65258284-65258303 | MS.gene21232:intron | 55.0% | |
| CTGGTTCAACGTCTGCGACA+CGG | + | chr1.2:65256747-65256766 | None:intergenic | 55.0% | |
| GAAGCTCTCAAGAGCTGCAG+AGG | - | chr1.2:65258545-65258564 | MS.gene21232:intron | 55.0% | |
| GACCCTCAAGAAGATCACCC+CGG | - | chr1.2:65258337-65258356 | MS.gene21232:intron | 55.0% | |
| GAGGCCGCACTTTCAGAAGT+CGG | - | chr1.2:65258647-65258666 | MS.gene21232:CDS | 55.0% | |
| GCTTCTCCGACGACTATGCA+CGG | - | chr1.2:65256643-65256662 | MS.gene21232:CDS | 55.0% | |
| GTTCCGTGTCCAACACTTGC+CGG | - | chr1.2:65256954-65256973 | MS.gene21232:CDS | 55.0% | |
| TCACCGGGGTGATCTTCTTG+AGG | + | chr1.2:65258343-65258362 | None:intergenic | 55.0% | |
| TGAACTCGAGAGATGCGTCC+AGG | - | chr1.2:65256799-65256818 | MS.gene21232:CDS | 55.0% | |
| TGTCAGACACCGGCAAGTGT+TGG | + | chr1.2:65256966-65256985 | None:intergenic | 55.0% | |
| ! | ATAGCTCCGATTGGTCACCG+GGG | + | chr1.2:65258357-65258376 | None:intergenic | 55.0% |
| ! | CGGTTCCTCCGGTCTTTTCT+AGG | + | chr1.2:65256727-65256746 | None:intergenic | 55.0% |
| ! | CTGAAAGTGCGGCCTCTAAG+TGG | + | chr1.2:65258643-65258662 | None:intergenic | 55.0% |
| ! | GATAGCTCCGATTGGTCACC+GGG | + | chr1.2:65258358-65258377 | None:intergenic | 55.0% |
| ! | GGAAGCTGTGTCGGTCTTTG+AGG | - | chr1.2:65258523-65258542 | MS.gene21232:intron | 55.0% |
| ! | GTTTGATTTCCGGCGGAGGA+AGG | - | chr1.2:65256621-65256640 | MS.gene21232:CDS | 55.0% |
| ! | TACGGCCGTTTGATTTCCGG+CGG | - | chr1.2:65256614-65256633 | MS.gene21232:CDS | 55.0% |
| ! | TGGTAAGTTTCGCGTTGGCG+CGG | + | chr1.2:65258257-65258276 | None:intergenic | 55.0% |
| !! | ACACCGGCAAGTGTTGGACA+CGG | + | chr1.2:65256960-65256979 | None:intergenic | 55.0% |
| !! | GGTCGGCTAGTCTTCGGTAA+AGG | + | chr1.2:65256706-65256725 | None:intergenic | 55.0% |
| !! | GTTGGTTGGTGTTGCAGTGC+AGG | - | chr1.2:65258475-65258494 | MS.gene21232:intron | 55.0% |
| ACGACTATGCACGGCTGCGA+CGG | - | chr1.2:65256652-65256671 | MS.gene21232:CDS | 60.0% | |
| GCCGACCTAGAAAAGACCGG+AGG | - | chr1.2:65256719-65256738 | MS.gene21232:CDS | 60.0% | |
| TCGCAGCCGTGCATAGTCGT+CGG | + | chr1.2:65256652-65256671 | None:intergenic | 60.0% | |
| CGTCTGCGACACGGTTCCTC+CGG | + | chr1.2:65256738-65256757 | None:intergenic | 65.0% | |
| TCGGAGAAGCCTTCCTCCGC+CGG | + | chr1.2:65256633-65256652 | None:intergenic | 65.0% | |
| ! | GGCCGTTTGATTTCCGGCGG+AGG | - | chr1.2:65256617-65256636 | MS.gene21232:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 65256608 | 65258895 | 65256608 | ID=MS.gene21232 |
| chr1.2 | mRNA | 65256608 | 65258895 | 65256608 | ID=MS.gene21232.t1;Parent=MS.gene21232 |
| chr1.2 | exon | 65258644 | 65258895 | 65258644 | ID=MS.gene21232.t1.exon1;Parent=MS.gene21232.t1 |
| chr1.2 | CDS | 65258644 | 65258895 | 65258644 | ID=cds.MS.gene21232.t1;Parent=MS.gene21232.t1 |
| chr1.2 | exon | 65256608 | 65257798 | 65256608 | ID=MS.gene21232.t1.exon2;Parent=MS.gene21232.t1 |
| chr1.2 | CDS | 65256608 | 65257798 | 65256608 | ID=cds.MS.gene21232.t1;Parent=MS.gene21232.t1 |
| Gene Sequence |
| Protein sequence |
