Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23792.t1 | P46278.1 | 98.6 | 434 | 5 | 1 | 1 | 433 | 1 | 434 | 2.40E-228 | 801.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23792.t1 | P46278 | 98.6 | 434 | 5 | 1 | 1 | 433 | 1 | 434 | 5.7e-231 | 801.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23792.t1 | G7L9H0 | 98.6 | 434 | 5 | 1 | 1 | 433 | 1 | 434 | 2.9e-228 | 800.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene23792 | 0.804894 | 1.73E-49 | -1.69E-46 |
| MS.gene050297 | MS.gene23792 | 0.868983 | 4.35E-66 | -1.69E-46 |
| MS.gene050310 | MS.gene23792 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene051478 | MS.gene23792 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene053536 | MS.gene23792 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene054643 | MS.gene23792 | 0.858164 | 9.94E-63 | -1.69E-46 |
| MS.gene055764 | MS.gene23792 | 0.81585 | 7.48E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene23792 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene05870 | MS.gene23792 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene058818 | MS.gene23792 | 0.801621 | 8.26E-49 | -1.69E-46 |
| MS.gene059300 | MS.gene23792 | 0.83417 | 3.50E-56 | -1.69E-46 |
| MS.gene059424 | MS.gene23792 | 0.809435 | 1.89E-50 | -1.69E-46 |
| MS.gene06057 | MS.gene23792 | 0.859477 | 4.03E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68361 | MS.gene23792 | PPI |
| MS.gene65301 | MS.gene23792 | PPI |
| MS.gene64859 | MS.gene23792 | PPI |
| MS.gene67555 | MS.gene23792 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23792.t1 | MTR_8g074000 | 98.618 | 434 | 5 | 1 | 1 | 433 | 1 | 434 | 0.0 | 894 |
| MS.gene23792.t1 | MTR_5g023790 | 73.086 | 431 | 103 | 5 | 6 | 431 | 6 | 428 | 0.0 | 638 |
| MS.gene23792.t1 | MTR_5g023790 | 72.656 | 384 | 92 | 5 | 6 | 384 | 6 | 381 | 0.0 | 557 |
| MS.gene23792.t1 | MTR_5g023790 | 70.462 | 325 | 83 | 5 | 6 | 325 | 6 | 322 | 6.38e-158 | 450 |
| MS.gene23792.t1 | MTR_7g089080 | 47.101 | 276 | 139 | 2 | 158 | 427 | 182 | 456 | 3.05e-77 | 261 |
| MS.gene23792.t1 | MTR_5g088980 | 43.223 | 273 | 152 | 3 | 153 | 423 | 143 | 414 | 5.30e-75 | 240 |
| MS.gene23792.t1 | MTR_1g011470 | 39.209 | 278 | 155 | 6 | 155 | 422 | 142 | 415 | 2.68e-57 | 194 |
| MS.gene23792.t1 | MTR_3g107970 | 39.608 | 255 | 147 | 3 | 175 | 422 | 213 | 467 | 4.33e-55 | 190 |
| MS.gene23792.t1 | MTR_3g088415 | 35.789 | 285 | 171 | 6 | 148 | 423 | 216 | 497 | 2.65e-53 | 186 |
| MS.gene23792.t1 | MTR_3g088405 | 38.430 | 242 | 132 | 6 | 196 | 423 | 264 | 502 | 4.45e-51 | 180 |
| MS.gene23792.t1 | MTR_2g102550 | 38.057 | 247 | 146 | 3 | 175 | 414 | 167 | 413 | 1.51e-48 | 171 |
| MS.gene23792.t1 | MTR_2g102520 | 40.343 | 233 | 131 | 4 | 158 | 383 | 199 | 430 | 8.15e-48 | 171 |
| MS.gene23792.t1 | MTR_1g018680 | 35.178 | 253 | 155 | 4 | 175 | 418 | 91 | 343 | 8.68e-47 | 165 |
| MS.gene23792.t1 | MTR_3g088415 | 39.035 | 228 | 129 | 5 | 148 | 368 | 216 | 440 | 1.31e-46 | 166 |
| MS.gene23792.t1 | MTR_3g102510 | 34.263 | 251 | 158 | 3 | 175 | 418 | 74 | 324 | 6.58e-45 | 159 |
| MS.gene23792.t1 | MTR_3g102520 | 33.333 | 261 | 165 | 4 | 167 | 418 | 83 | 343 | 1.73e-43 | 156 |
| MS.gene23792.t1 | MTR_3g102530 | 30.678 | 339 | 207 | 8 | 98 | 418 | 8 | 336 | 2.59e-42 | 153 |
| MS.gene23792.t1 | MTR_3g060770 | 39.623 | 212 | 121 | 3 | 207 | 411 | 60 | 271 | 1.68e-39 | 143 |
| MS.gene23792.t1 | MTR_3g102560 | 34.746 | 236 | 140 | 4 | 176 | 402 | 65 | 295 | 2.41e-39 | 144 |
| MS.gene23792.t1 | MTR_3g060410 | 37.500 | 232 | 131 | 5 | 201 | 424 | 129 | 354 | 7.48e-38 | 141 |
| MS.gene23792.t1 | MTR_3g061680 | 37.089 | 213 | 127 | 3 | 206 | 411 | 49 | 261 | 4.72e-37 | 137 |
| MS.gene23792.t1 | MTR_3g088415 | 40.000 | 175 | 101 | 3 | 148 | 321 | 216 | 387 | 1.54e-36 | 138 |
| MS.gene23792.t1 | MTR_3g060820 | 38.318 | 214 | 123 | 5 | 206 | 411 | 49 | 261 | 7.63e-36 | 133 |
| MS.gene23792.t1 | MTR_3g060400 | 37.788 | 217 | 126 | 5 | 203 | 411 | 52 | 267 | 1.67e-35 | 132 |
| MS.gene23792.t1 | MTR_3g460990 | 37.788 | 217 | 126 | 5 | 203 | 411 | 52 | 267 | 1.67e-35 | 132 |
| MS.gene23792.t1 | MTR_3g102540 | 32.287 | 223 | 137 | 4 | 203 | 418 | 40 | 255 | 6.69e-35 | 131 |
| MS.gene23792.t1 | MTR_6g045270 | 36.607 | 224 | 122 | 7 | 208 | 424 | 75 | 285 | 1.20e-32 | 126 |
| MS.gene23792.t1 | MTR_5g011900 | 33.333 | 186 | 117 | 3 | 160 | 340 | 56 | 239 | 1.52e-22 | 96.3 |
| MS.gene23792.t1 | MTR_5g044040 | 46.753 | 77 | 41 | 0 | 229 | 305 | 7 | 83 | 1.59e-17 | 79.0 |
| MS.gene23792.t1 | MTR_1g032850 | 32.967 | 182 | 118 | 3 | 208 | 386 | 372 | 552 | 1.30e-16 | 82.4 |
| MS.gene23792.t1 | MTR_5g015670 | 28.395 | 162 | 104 | 5 | 204 | 358 | 101 | 257 | 5.03e-14 | 73.6 |
| MS.gene23792.t1 | MTR_2g005960 | 33.898 | 118 | 64 | 3 | 165 | 268 | 112 | 229 | 1.39e-13 | 70.5 |
| MS.gene23792.t1 | MTR_3g103080 | 31.092 | 119 | 79 | 1 | 202 | 317 | 61 | 179 | 6.14e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23792.t1 | AT1G20610 | 56.177 | 429 | 179 | 6 | 5 | 427 | 4 | 429 | 4.65e-167 | 476 |
| MS.gene23792.t1 | AT1G76310 | 56.552 | 435 | 169 | 9 | 5 | 427 | 4 | 430 | 1.77e-164 | 470 |
| MS.gene23792.t1 | AT1G76310 | 53.132 | 463 | 169 | 10 | 5 | 427 | 4 | 458 | 8.06e-158 | 454 |
| MS.gene23792.t1 | AT2G17620 | 59.259 | 405 | 149 | 7 | 29 | 427 | 29 | 423 | 2.30e-156 | 449 |
| MS.gene23792.t1 | AT4G35620 | 57.014 | 442 | 162 | 10 | 1 | 429 | 1 | 427 | 2.67e-150 | 434 |
| MS.gene23792.t1 | AT1G76310 | 55.357 | 392 | 155 | 9 | 5 | 384 | 4 | 387 | 2.98e-140 | 406 |
| MS.gene23792.t1 | AT4G35620 | 56.818 | 396 | 144 | 9 | 1 | 384 | 1 | 381 | 1.46e-131 | 384 |
| MS.gene23792.t1 | AT1G76310 | 54.955 | 333 | 130 | 9 | 5 | 325 | 4 | 328 | 2.19e-110 | 328 |
| MS.gene23792.t1 | AT3G11520 | 40.054 | 367 | 203 | 4 | 78 | 429 | 48 | 412 | 5.05e-85 | 266 |
| MS.gene23792.t1 | AT1G20590 | 68.023 | 172 | 55 | 0 | 233 | 404 | 63 | 234 | 7.17e-84 | 258 |
| MS.gene23792.t1 | AT5G06150 | 37.076 | 383 | 202 | 5 | 78 | 427 | 57 | 433 | 8.36e-84 | 264 |
| MS.gene23792.t1 | AT2G26760 | 45.525 | 257 | 137 | 3 | 156 | 410 | 111 | 366 | 3.89e-77 | 245 |
| MS.gene23792.t1 | AT4G37490 | 44.718 | 284 | 150 | 4 | 150 | 427 | 140 | 422 | 2.24e-76 | 244 |
| MS.gene23792.t1 | AT3G11520 | 39.634 | 328 | 181 | 4 | 78 | 390 | 48 | 373 | 1.44e-73 | 236 |
| MS.gene23792.t1 | AT1G16330 | 43.728 | 279 | 155 | 1 | 144 | 422 | 366 | 642 | 3.39e-73 | 242 |
| MS.gene23792.t1 | AT5G25380 | 31.894 | 417 | 255 | 12 | 21 | 418 | 17 | 423 | 1.10e-57 | 196 |
| MS.gene23792.t1 | AT5G25380 | 31.894 | 417 | 255 | 12 | 21 | 418 | 17 | 423 | 1.10e-57 | 196 |
| MS.gene23792.t1 | AT5G25380 | 32.143 | 420 | 256 | 13 | 21 | 418 | 17 | 429 | 2.72e-57 | 195 |
| MS.gene23792.t1 | AT1G77390 | 39.033 | 269 | 156 | 4 | 158 | 419 | 162 | 429 | 5.04e-57 | 194 |
| MS.gene23792.t1 | AT5G25380 | 31.796 | 412 | 252 | 12 | 21 | 413 | 17 | 418 | 9.75e-57 | 193 |
| MS.gene23792.t1 | AT5G11300 | 43.363 | 226 | 122 | 2 | 200 | 419 | 198 | 423 | 4.73e-55 | 189 |
| MS.gene23792.t1 | AT1G44110 | 37.410 | 278 | 166 | 4 | 149 | 419 | 169 | 445 | 1.39e-54 | 188 |
| MS.gene23792.t1 | AT1G47210 | 37.329 | 292 | 171 | 6 | 136 | 418 | 66 | 354 | 3.55e-54 | 185 |
| MS.gene23792.t1 | AT5G06150 | 48.571 | 175 | 87 | 2 | 158 | 332 | 165 | 336 | 9.93e-54 | 182 |
| MS.gene23792.t1 | AT5G43080 | 37.398 | 246 | 152 | 2 | 175 | 418 | 87 | 332 | 1.02e-53 | 183 |
| MS.gene23792.t1 | AT1G15570 | 38.433 | 268 | 157 | 4 | 158 | 418 | 172 | 438 | 4.81e-52 | 181 |
| MS.gene23792.t1 | AT5G43080 | 36.653 | 251 | 152 | 3 | 175 | 418 | 87 | 337 | 1.51e-51 | 177 |
| MS.gene23792.t1 | AT1G80370 | 38.060 | 268 | 158 | 4 | 158 | 418 | 181 | 447 | 1.48e-50 | 177 |
| MS.gene23792.t1 | AT1G47220 | 35.548 | 301 | 173 | 7 | 138 | 418 | 9 | 308 | 8.87e-50 | 172 |
| MS.gene23792.t1 | AT1G47230 | 36.863 | 255 | 148 | 5 | 175 | 418 | 95 | 347 | 3.37e-49 | 171 |
| MS.gene23792.t1 | AT5G11300 | 48.045 | 179 | 87 | 2 | 200 | 372 | 198 | 376 | 6.14e-49 | 172 |
| MS.gene23792.t1 | AT1G47230 | 36.719 | 256 | 148 | 6 | 175 | 418 | 95 | 348 | 1.97e-47 | 167 |
| MS.gene23792.t1 | AT1G34460 | 32.450 | 302 | 142 | 9 | 35 | 322 | 142 | 395 | 1.77e-37 | 142 |
| MS.gene23792.t1 | AT1G34460 | 32.450 | 302 | 142 | 9 | 35 | 322 | 142 | 395 | 1.77e-37 | 142 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 128 | 384 | 6.28e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 6.76e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 6.76e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 6.76e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 6.76e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 7.12e-37 | 141 |
| MS.gene23792.t1 | AT1G34460 | 32.131 | 305 | 142 | 9 | 35 | 322 | 142 | 398 | 8.02e-37 | 141 |
| MS.gene23792.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 335 | 568 | 1.15e-20 | 95.1 |
| MS.gene23792.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 335 | 568 | 1.38e-20 | 94.7 |
| MS.gene23792.t1 | AT1G14750 | 31.381 | 239 | 156 | 5 | 151 | 386 | 167 | 400 | 1.87e-20 | 93.2 |
| MS.gene23792.t1 | AT1G14750 | 31.381 | 239 | 155 | 6 | 151 | 386 | 167 | 399 | 2.75e-19 | 89.7 |
| MS.gene23792.t1 | AT1G47210 | 37.692 | 130 | 75 | 4 | 136 | 262 | 66 | 192 | 2.48e-17 | 80.5 |
Find 92 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCCGGCTCCGGCTTTC+TGG | 0.084802 | 8.4:+30602236 | None:intergenic |
| CCATTGAATTCGAATGAGTT+TGG | 0.261009 | 8.4:-30604426 | MS.gene23792:CDS |
| TATAGAGGGAGAGATGATTT+TGG | 0.262359 | 8.4:-30604192 | MS.gene23792:CDS |
| GGGCAGAACAGAAGAGCTTT+AGG | 0.305806 | 8.4:-30605437 | MS.gene23792:CDS |
| TGAAAAGAAACAGGCTGATC+TGG | 0.314414 | 8.4:-30605197 | MS.gene23792:CDS |
| ATAGGCTCTGGTTGGTCTTC+TGG | 0.320848 | 8.4:+30604369 | None:intergenic |
| TAATCTCATAGACAGATTCT+TGG | 0.324335 | 8.4:-30603110 | MS.gene23792:CDS |
| TGTAAGCTCTGTCAGCTATA+TGG | 0.334048 | 8.4:+30602981 | None:intergenic |
| TGGTCTTGTTGCCATGCTTT+TGG | 0.336057 | 8.4:-30603050 | MS.gene23792:CDS |
| GGTTGAGATGGAGGATATAG+AGG | 0.350208 | 8.4:-30604207 | MS.gene23792:CDS |
| AGGTTTGCTGCACAAATTGC+TGG | 0.354792 | 8.4:-30604585 | MS.gene23792:CDS |
| CCAAACTCATTCGAATTCAA+TGG | 0.363201 | 8.4:+30604426 | None:intergenic |
| AGTTTCTGTGCCTGTCGTTT+CGG | 0.378515 | 8.4:-30603011 | MS.gene23792:CDS |
| TTTCTTGGTTGAGCTATCTC+TGG | 0.388305 | 8.4:-30602627 | MS.gene23792:CDS |
| ACAGGAGTGCATAGGAAGTA+TGG | 0.389149 | 8.4:-30602211 | MS.gene23792:CDS |
| TCCTGTCAGTTTCCCGGCTC+CGG | 0.389685 | 8.4:+30602228 | None:intergenic |
| ATTACCTTCCTGCAGTATCT+TGG | 0.391858 | 8.4:-30603354 | MS.gene23792:intron |
| ATGCACTCCTGTCAGTTTCC+CGG | 0.396721 | 8.4:+30602222 | None:intergenic |
| CCAACCAGAGCCTATGACTT+TGG | 0.406687 | 8.4:-30604361 | MS.gene23792:CDS |
| TGAGATTTGTGAAAAGAAAC+AGG | 0.423211 | 8.4:-30605206 | MS.gene23792:CDS |
| CATGGTGGTGGAAGAATTGT+TGG | 0.432361 | 8.4:-30605458 | MS.gene23792:CDS |
| GCTGAAGTTTCCACCATCCT+TGG | 0.437665 | 8.4:-30602591 | MS.gene23792:CDS |
| TTCCACCAGAAAGCCGGAGC+CGG | 0.440451 | 8.4:-30602241 | MS.gene23792:CDS |
| TTAGGAAGAGGTTGAGATGG+AGG | 0.445763 | 8.4:-30604216 | MS.gene23792:intron |
| GCTGGCTCTCTTCCTATGGC+TGG | 0.454389 | 8.4:+30602125 | None:intergenic |
| AAGGAAAGACATTCTCGAAA+TGG | 0.454782 | 8.4:-30602957 | MS.gene23792:intron |
| TCCACCAGAAAGCCGGAGCC+GGG | 0.455107 | 8.4:-30602240 | MS.gene23792:CDS |
| TCAGTATGCTCCAAAGTCAT+AGG | 0.464004 | 8.4:+30604351 | None:intergenic |
| CTGTGTTTCACCAACCTACA+TGG | 0.464678 | 8.4:-30603331 | MS.gene23792:CDS |
| CTTGGTTGAGCTATCTCTGG+TGG | 0.487275 | 8.4:-30602624 | MS.gene23792:CDS |
| TGCTCCAAAGTCATAGGCTC+TGG | 0.489422 | 8.4:+30604357 | None:intergenic |
| GTTATGCCAAGAAAATTTCA+AGG | 0.494043 | 8.4:-30605647 | MS.gene23792:intron |
| CATCATCCTCACCTTGTGAT+GGG | 0.499765 | 8.4:+30605166 | None:intergenic |
| TCCCGGCTCCGGCTTTCTGG+TGG | 0.502002 | 8.4:+30602239 | None:intergenic |
| AAACAATTCTCTTGCTGTTG+TGG | 0.505256 | 8.4:-30604150 | MS.gene23792:CDS |
| TTGACCTCAATGAGAGGATG+AGG | 0.506853 | 8.4:-30603299 | MS.gene23792:CDS |
| TAAAATAATACCATCTCAAG+TGG | 0.513574 | 8.4:+30604312 | None:intergenic |
| GCCGGAGCCGGGAAACTGAC+AGG | 0.514290 | 8.4:-30602229 | MS.gene23792:CDS |
| TAACTTGAGTTCATCATCAA+TGG | 0.515623 | 8.4:+30604392 | None:intergenic |
| GCATCATCCTCACCTTGTGA+TGG | 0.528830 | 8.4:+30605165 | None:intergenic |
| AATCAAGTGGGTCATGGTGG+TGG | 0.531920 | 8.4:-30605470 | MS.gene23792:CDS |
| GTTGAGATGGAGGATATAGA+GGG | 0.532314 | 8.4:-30604206 | MS.gene23792:CDS |
| GAAAAGAAACAGGCTGATCT+GGG | 0.542053 | 8.4:-30605196 | MS.gene23792:CDS |
| CAATCTTTCTGTAGTAAGCA+TGG | 0.544092 | 8.4:+30604111 | None:intergenic |
| CTGTCAGTGGTTTCAAACAC+TGG | 0.547379 | 8.4:-30602535 | MS.gene23792:CDS |
| GTTGGATTCCACCAGAAAGC+CGG | 0.549405 | 8.4:-30602247 | MS.gene23792:CDS |
| TTTGAAACAGCTTGAGCTGG+TGG | 0.549805 | 8.4:-30602654 | MS.gene23792:intron |
| CTCATGAAAACATAAGCAGT+TGG | 0.552049 | 8.4:+30602796 | None:intergenic |
| TTCTCCAGAAGAAAACATGC+TGG | 0.555497 | 8.4:+30602154 | None:intergenic |
| TGTAAGAAAGAAACTTCAGC+TGG | 0.563142 | 8.4:-30603074 | MS.gene23792:CDS |
| ACCCTTGTGTTGTACACAAG+AGG | 0.563360 | 8.4:-30605379 | MS.gene23792:CDS |
| AGAAAGAAACTTCAGCTGGT+TGG | 0.565294 | 8.4:-30603070 | MS.gene23792:CDS |
| TAGAGAGTGCTCTATGCTGA+TGG | 0.570792 | 8.4:-30602269 | MS.gene23792:CDS |
| TCAAGTGGATCACTATGCAT+TGG | 0.570854 | 8.4:+30604327 | None:intergenic |
| CCAAAGTCATAGGCTCTGGT+TGG | 0.576471 | 8.4:+30604361 | None:intergenic |
| ACTAGTTGACTGGCTGATTG+AGG | 0.576580 | 8.4:-30603271 | MS.gene23792:intron |
| AGTTGTTCATCCATGTAGGT+TGG | 0.578213 | 8.4:+30603321 | None:intergenic |
| GAGTGCTCTATGCTGATGGT+TGG | 0.583871 | 8.4:-30602265 | MS.gene23792:CDS |
| TTTCATGAGAAGGTTTCTGA+AGG | 0.585150 | 8.4:-30602782 | MS.gene23792:CDS |
| ACCCTCTTGTGTACAACACA+AGG | 0.585319 | 8.4:+30605377 | None:intergenic |
| GGAATGAATCAAGTGGGTCA+TGG | 0.585969 | 8.4:-30605476 | MS.gene23792:CDS |
| TGCTTACTACAGAAAGATTG+AGG | 0.587812 | 8.4:-30604108 | MS.gene23792:intron |
| GCATAGTGATCCACTTGAGA+TGG | 0.589041 | 8.4:-30604322 | MS.gene23792:intron |
| GAGTTCATCATCAATGGCGA+TGG | 0.589270 | 8.4:+30604398 | None:intergenic |
| TTGTGTACAACACAAGGGTA+AGG | 0.590139 | 8.4:+30605383 | None:intergenic |
| GCAGCAGCAGCAACCAAGGA+TGG | 0.592621 | 8.4:+30602578 | None:intergenic |
| AAGAGAAACTACCTCAGCAT+AGG | 0.594491 | 8.4:+30604551 | None:intergenic |
| GACTGCAGCAGCAGCAACCA+AGG | 0.597418 | 8.4:+30602574 | None:intergenic |
| ATGGTGGTGGAAGAATTGTT+GGG | 0.599493 | 8.4:-30605457 | MS.gene23792:CDS |
| TGAGGGCTATACTAGTTGAC+TGG | 0.601446 | 8.4:-30603281 | MS.gene23792:CDS |
| CAGAACAGAAGAGCTTTAGG+AGG | 0.603464 | 8.4:-30605434 | MS.gene23792:CDS |
| GGAAACTGACAGGAGTGCAT+AGG | 0.605234 | 8.4:-30602219 | MS.gene23792:CDS |
| TGGATCAGATCCGAAACGAC+AGG | 0.607714 | 8.4:+30603001 | None:intergenic |
| GCAGCAGCAACCAAGGATGG+TGG | 0.610277 | 8.4:+30602581 | None:intergenic |
| CCCTTGTGTTGTACACAAGA+GGG | 0.611245 | 8.4:-30605378 | MS.gene23792:CDS |
| TAGCCCTCATCCTCTCATTG+AGG | 0.620243 | 8.4:+30603295 | None:intergenic |
| TTTAGGAGGAATGAATCAAG+TGG | 0.621092 | 8.4:-30605483 | MS.gene23792:intron |
| GTCAAGTTGTTCATCCATGT+AGG | 0.623557 | 8.4:+30603317 | None:intergenic |
| ATACTTGCATGCCAAAAGCA+TGG | 0.626148 | 8.4:+30603039 | None:intergenic |
| GGAGAACAAGAACCAGCCAT+AGG | 0.628255 | 8.4:-30602137 | None:intergenic |
| AACAACTTGACCTCAATGAG+AGG | 0.630153 | 8.4:-30603305 | MS.gene23792:CDS |
| ACAGCTCAATGCACTGTCAG+TGG | 0.642330 | 8.4:-30602548 | MS.gene23792:CDS |
| TTAGGAGGAATGAATCAAGT+GGG | 0.649963 | 8.4:-30605482 | MS.gene23792:intron |
| TGACCTCAATGAGAGGATGA+GGG | 0.651271 | 8.4:-30603298 | MS.gene23792:CDS |
| AGAACAGAAGAGCTTTAGGA+GGG | 0.662736 | 8.4:-30605433 | MS.gene23792:CDS |
| GAAACAGTGTCTCTTGCATG+AGG | 0.663445 | 8.4:+30603140 | None:intergenic |
| CTCACAGCAATCCTATGCTG+AGG | 0.663582 | 8.4:-30604562 | MS.gene23792:intron |
| ATGAATCAAGTGGGTCATGG+TGG | 0.688882 | 8.4:-30605473 | MS.gene23792:CDS |
| TAGCTGACAGAGCTTACACA+AGG | 0.713688 | 8.4:-30602976 | MS.gene23792:CDS |
| TGGGACATAGACCCATCACA+AGG | 0.714635 | 8.4:-30605177 | MS.gene23792:intron |
| CCCTCTTGTGTACAACACAA+GGG | 0.715744 | 8.4:+30605378 | None:intergenic |
| ACTGGAACAAGACATGCGAG+TGG | 0.734063 | 8.4:-30602517 | MS.gene23792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATTTTGATATTTATTA+TGG | - | chr8.4:30604014-30604033 | MS.gene23792:intron | 10.0% |
| !!! | ATTTTTTATGATTATTAGTT+TGG | - | chr8.4:30602535-30602554 | MS.gene23792:CDS | 10.0% |
| !! | AATAATTTCATTTGACAATA+AGG | + | chr8.4:30602929-30602948 | None:intergenic | 15.0% |
| !! | TGAATTTAAAGATTTGAATT+GGG | - | chr8.4:30602287-30602306 | MS.gene23792:intron | 15.0% |
| !! | TTGAATTTAAAGATTTGAAT+TGG | - | chr8.4:30602286-30602305 | MS.gene23792:intron | 15.0% |
| !!! | AATTTTGAAATTGAATATCA+TGG | - | chr8.4:30602896-30602915 | MS.gene23792:intron | 15.0% |
| !!! | AATTTTGAAATTTAATGTCA+TGG | - | chr8.4:30602736-30602755 | MS.gene23792:intron | 15.0% |
| !!! | CTAAAATCATATTTTTAAGT+TGG | - | chr8.4:30604354-30604373 | MS.gene23792:CDS | 15.0% |
| !!! | GATTCAAAATTAGTTTTTTA+TGG | - | chr8.4:30602261-30602280 | MS.gene23792:CDS | 15.0% |
| !!! | TTGAATCTTTTTTGAATTTT+AGG | - | chr8.4:30602321-30602340 | MS.gene23792:intron | 15.0% |
| !!! | TTTAAAATTCCAATATAATC+CGG | + | chr8.4:30603741-30603760 | None:intergenic | 15.0% |
| !! | AATTGTCAAGTGAAATTATA+GGG | - | chr8.4:30602771-30602790 | MS.gene23792:CDS | 20.0% |
| !! | ACAAAGATATCAATAATTTG+AGG | + | chr8.4:30604595-30604614 | None:intergenic | 20.0% |
| !! | ATGATTTATGTAATGAAATG+AGG | - | chr8.4:30603175-30603194 | MS.gene23792:intron | 20.0% |
| !! | ATGGAATTATTATTAAGCTT+AGG | - | chr8.4:30604096-30604115 | MS.gene23792:intron | 20.0% |
| !! | ATGTTGATGTATTGTTAATT+AGG | - | chr8.4:30603213-30603232 | MS.gene23792:intron | 20.0% |
| !! | ATTAGTTACATTGAATTGAA+CGG | + | chr8.4:30604935-30604954 | None:intergenic | 20.0% |
| !! | ATTTCATTACATAAATCATG+GGG | + | chr8.4:30603174-30603193 | None:intergenic | 20.0% |
| !! | CATTTCATTACATAAATCAT+GGG | + | chr8.4:30603175-30603194 | None:intergenic | 20.0% |
| !! | TAATTGTCAAGTGAAATTAT+AGG | - | chr8.4:30602770-30602789 | MS.gene23792:CDS | 20.0% |
| !! | TCATTTCATTACATAAATCA+TGG | + | chr8.4:30603176-30603195 | None:intergenic | 20.0% |
| !! | TGAATTGTCAAATGAAATTA+TGG | - | chr8.4:30603089-30603108 | MS.gene23792:CDS | 20.0% |
| !! | TGTGAAAAATTATTACAAGA+TGG | + | chr8.4:30604902-30604921 | None:intergenic | 20.0% |
| !! | TTAAACTAAATTCTGAATCA+TGG | - | chr8.4:30603341-30603360 | MS.gene23792:CDS | 20.0% |
| !!! | AAATTTTGATTGGAACATAA+AGG | - | chr8.4:30602207-30602226 | MS.gene23792:CDS | 20.0% |
| !!! | AATCTTTTTTGAATTTTAGG+AGG | - | chr8.4:30602324-30602343 | MS.gene23792:intron | 20.0% |
| !!! | TACATTGTTGAAATTTTGAT+TGG | - | chr8.4:30602197-30602216 | MS.gene23792:CDS | 20.0% |
| !!! | TATCTTTGTCATTTAATAAC+CGG | - | chr8.4:30604606-30604625 | MS.gene23792:intron | 20.0% |
| !!! | TATTATACTTTTGATTCGAT+TGG | + | chr8.4:30604406-30604425 | None:intergenic | 20.0% |
| !!! | TCATATTTTTAAGTTGGTTT+TGG | - | chr8.4:30604360-30604379 | MS.gene23792:CDS | 20.0% |
| !!! | TGGAATTTTAAACTTCATAT+TGG | - | chr8.4:30603749-30603768 | MS.gene23792:intron | 20.0% |
| !!! | TTATTAGTTTGGTTTCTTTA+AGG | - | chr8.4:30602546-30602565 | MS.gene23792:CDS | 20.0% |
| ! | AAGCATATCAATATTTAAGC+CGG | + | chr8.4:30604628-30604647 | None:intergenic | 25.0% |
| ! | AAGTTGTTTATGCTTTAACA+TGG | - | chr8.4:30605500-30605519 | MS.gene23792:intron | 25.0% |
| ! | AATATCTAACACTGTTATGT+TGG | - | chr8.4:30604248-30604267 | MS.gene23792:intron | 25.0% |
| ! | AGTTAATGAAGTATGACTAA+TGG | + | chr8.4:30605115-30605134 | None:intergenic | 25.0% |
| ! | ATATCAATGATCTTACAAGT+TGG | - | chr8.4:30604140-30604159 | MS.gene23792:CDS | 25.0% |
| ! | TAAAATAATACCATCTCAAG+TGG | + | chr8.4:30603512-30603531 | None:intergenic | 25.0% |
| ! | TCAATTTCAAACATGTAGAT+TGG | - | chr8.4:30602797-30602816 | MS.gene23792:CDS | 25.0% |
| ! | TGAAATTGAATATCATGGAA+TGG | - | chr8.4:30602901-30602920 | MS.gene23792:intron | 25.0% |
| ! | TTGATGTATTGTTAATTAGG+AGG | - | chr8.4:30603216-30603235 | MS.gene23792:intron | 25.0% |
| !! | AATGTACCTTGAAATTTTCT+TGG | + | chr8.4:30602183-30602202 | None:intergenic | 25.0% |
| !! | GCAATTTTATTGTAGATTTG+AGG | - | chr8.4:30604058-30604077 | MS.gene23792:intron | 25.0% |
| !! | TTATACATTTTCACCTATCT+CGG | + | chr8.4:30604328-30604347 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTTGTTGTTGTT+GGG | - | chr8.4:30602688-30602707 | MS.gene23792:intron | 25.0% |
| !!! | TCAATTTCAAACTTGTTGAT+TGG | - | chr8.4:30603117-30603136 | MS.gene23792:CDS | 25.0% |
| !!! | TGTTTTCTTTTGTTGTTGTT+AGG | - | chr8.4:30603009-30603028 | MS.gene23792:CDS | 25.0% |
| !!! | TGTTTTGTTTTTGTTGTTGT+TGG | - | chr8.4:30602687-30602706 | MS.gene23792:intron | 25.0% |
| !!! | TTTTGTTTTCGATTGTAGAT+TGG | - | chr8.4:30602947-30602966 | MS.gene23792:intron | 25.0% |
| AACTTGCAAGTTGTAAAACT+TGG | - | chr8.4:30603974-30603993 | MS.gene23792:intron | 30.0% | |
| AATTCAATCATTGTCAAGTG+TGG | + | chr8.4:30603916-30603935 | None:intergenic | 30.0% | |
| AGATCATTGATATTCGAATC+AGG | + | chr8.4:30604133-30604152 | None:intergenic | 30.0% | |
| CACTTGACAATTAAGTAACA+TGG | + | chr8.4:30602763-30602782 | None:intergenic | 30.0% | |
| CATTTGACAATTCAGTACAA+TGG | + | chr8.4:30603083-30603102 | None:intergenic | 30.0% | |
| GAGATACAAGGAACAATAAA+TGG | + | chr8.4:30604281-30604300 | None:intergenic | 30.0% | |
| GATCATTGATATTCGAATCA+GGG | + | chr8.4:30604132-30604151 | None:intergenic | 30.0% | |
| GGAAACATTTGATCGAAAAT+TGG | - | chr8.4:30602709-30602728 | MS.gene23792:intron | 30.0% | |
| GTTATGCCAAGAAAATTTCA+AGG | - | chr8.4:30602174-30602193 | MS.gene23792:CDS | 30.0% | |
| TAACTTGAGTTCATCATCAA+TGG | + | chr8.4:30603432-30603451 | None:intergenic | 30.0% | |
| TAATCTCATAGACAGATTCT+TGG | - | chr8.4:30604711-30604730 | MS.gene23792:intron | 30.0% | |
| TATGACTAATGGAACTCATT+TGG | + | chr8.4:30605104-30605123 | None:intergenic | 30.0% | |
| TCACAAAACTAACTTCTATC+AGG | + | chr8.4:30603777-30603796 | None:intergenic | 30.0% | |
| TCTTCCTAAAAAGTAGTACA+AGG | + | chr8.4:30603594-30603613 | None:intergenic | 30.0% | |
| TGAGATTTGTGAAAAGAAAC+AGG | - | chr8.4:30602615-30602634 | MS.gene23792:CDS | 30.0% | |
| TGATTGGAACATAAAGGAAA+AGG | - | chr8.4:30602213-30602232 | MS.gene23792:CDS | 30.0% | |
| ! | AGATATCAATAATTTGAGGC+AGG | + | chr8.4:30604591-30604610 | None:intergenic | 30.0% |
| ! | ATCAATCAGAATTTTGTGCA+TGG | - | chr8.4:30602411-30602430 | MS.gene23792:intron | 30.0% |
| ! | GAGGTTGATTATCTTTACAA+TGG | - | chr8.4:30604077-30604096 | MS.gene23792:intron | 30.0% |
| !!! | CATTAGTCTGCTTTTTTGTA+TGG | - | chr8.4:30603826-30603845 | MS.gene23792:intron | 30.0% |
| !!! | TTAAGTTGGTTTTGGAAACA+TGG | - | chr8.4:30604368-30604387 | MS.gene23792:CDS | 30.0% |
| !!! | TTGTACTACTTTTTAGGAAG+AGG | - | chr8.4:30603593-30603612 | MS.gene23792:intron | 30.0% |
| AAGGAAAGACATTCTCGAAA+TGG | - | chr8.4:30604864-30604883 | MS.gene23792:intron | 35.0% | |
| ATGCTTGCTTGATTGATATC+AGG | - | chr8.4:30604642-30604661 | MS.gene23792:intron | 35.0% | |
| ATTGATATTCGAATCAGGGT+TGG | + | chr8.4:30604128-30604147 | None:intergenic | 35.0% | |
| CAATCTTTCTGTAGTAAGCA+TGG | + | chr8.4:30603713-30603732 | None:intergenic | 35.0% | |
| CAATTCAGTACAATGGTCTA+TGG | + | chr8.4:30603076-30603095 | None:intergenic | 35.0% | |
| CCAAACTCATTCGAATTCAA+TGG | + | chr8.4:30603398-30603417 | None:intergenic | 35.0% | |
| CCATTGAATTCGAATGAGTT+TGG | - | chr8.4:30603395-30603414 | MS.gene23792:intron | 35.0% | |
| CTCATGAAAACATAAGCAGT+TGG | + | chr8.4:30605028-30605047 | None:intergenic | 35.0% | |
| GACGACATATATTGCAGATT+TGG | + | chr8.4:30604171-30604190 | None:intergenic | 35.0% | |
| GATTTCTTTCAAAACACCGT+AGG | - | chr8.4:30604961-30604980 | MS.gene23792:intron | 35.0% | |
| GCAGTAAAGTATGAGATACA+AGG | + | chr8.4:30604293-30604312 | None:intergenic | 35.0% | |
| TAGTGGCTAATTGAAAAGAG+AGG | + | chr8.4:30605374-30605393 | None:intergenic | 35.0% | |
| TGAACACTATCTATCAAGTG+TGG | + | chr8.4:30604223-30604242 | None:intergenic | 35.0% | |
| TGCTTACTACAGAAAGATTG+AGG | - | chr8.4:30603713-30603732 | MS.gene23792:intron | 35.0% | |
| TGTAAGAAAGAAACTTCAGC+TGG | - | chr8.4:30604747-30604766 | MS.gene23792:intron | 35.0% | |
| TTAGGAGGAATGAATCAAGT+GGG | - | chr8.4:30602339-30602358 | MS.gene23792:intron | 35.0% | |
| TTGTAGATTGGTGCAGATTA+AGG | - | chr8.4:30602959-30602978 | MS.gene23792:CDS | 35.0% | |
| TTTAGGAGGAATGAATCAAG+TGG | - | chr8.4:30602338-30602357 | MS.gene23792:intron | 35.0% | |
| TTTCATGAGAAGGTTTCTGA+AGG | - | chr8.4:30605039-30605058 | MS.gene23792:intron | 35.0% | |
| ! | CTCTTTTCAATTAGCCACTA+GGG | - | chr8.4:30605374-30605393 | MS.gene23792:CDS | 35.0% |
| ! | CTGCTTATGTTTTCATGAGA+AGG | - | chr8.4:30605029-30605048 | MS.gene23792:intron | 35.0% |
| ! | TATAGAGGGAGAGATGATTT+TGG | - | chr8.4:30603629-30603648 | MS.gene23792:intron | 35.0% |
| ! | TCTCTTTTCAATTAGCCACT+AGG | - | chr8.4:30605373-30605392 | MS.gene23792:CDS | 35.0% |
| !! | AAACAATTCTCTTGCTGTTG+TGG | - | chr8.4:30603671-30603690 | MS.gene23792:intron | 35.0% |
| !! | ATTGAGGTACCGGATTATAT+TGG | - | chr8.4:30603729-30603748 | MS.gene23792:intron | 35.0% |
| !! | TTTTTAGGAAGAGGTTGAGA+TGG | - | chr8.4:30603602-30603621 | MS.gene23792:intron | 35.0% |
| !!! | GTTGATTGGTGCTGATTTTT+GGG | - | chr8.4:30603131-30603150 | MS.gene23792:CDS | 35.0% |
| !!! | TATTTTGAAACAGCTTGAGC+TGG | - | chr8.4:30605164-30605183 | MS.gene23792:intron | 35.0% |
| !!! | TGTTGATTGGTGCTGATTTT+TGG | - | chr8.4:30603130-30603149 | MS.gene23792:CDS | 35.0% |
| !!! | TTCGCCTTGTACTACTTTTT+AGG | - | chr8.4:30603587-30603606 | MS.gene23792:intron | 35.0% |
| !!! | TTGATTGGTGCTGATTTTTG+GGG | - | chr8.4:30603132-30603151 | MS.gene23792:CDS | 35.0% |
| AACAACTTGACCTCAATGAG+AGG | - | chr8.4:30604516-30604535 | MS.gene23792:intron | 40.0% | |
| AAGAGAAACTACCTCAGCAT+AGG | + | chr8.4:30603273-30603292 | None:intergenic | 40.0% | |
| AGAAAGAAACTTCAGCTGGT+TGG | - | chr8.4:30604751-30604770 | MS.gene23792:intron | 40.0% | |
| AGTTGTTCATCCATGTAGGT+TGG | + | chr8.4:30604503-30604522 | None:intergenic | 40.0% | |
| ATACTTGCATGCCAAAAGCA+TGG | + | chr8.4:30604785-30604804 | None:intergenic | 40.0% | |
| ATTACCTTCCTGCAGTATCT+TGG | - | chr8.4:30604467-30604486 | MS.gene23792:intron | 40.0% | |
| CTACAGAAAGATTGAGGTAC+CGG | - | chr8.4:30603719-30603738 | MS.gene23792:intron | 40.0% | |
| CTATCCAATGATTCCGAGAT+AGG | - | chr8.4:30604312-30604331 | MS.gene23792:intron | 40.0% | |
| GAAAAGAAACAGGCTGATCT+GGG | - | chr8.4:30602625-30602644 | MS.gene23792:CDS | 40.0% | |
| GTTGAGATGGAGGATATAGA+GGG | - | chr8.4:30603615-30603634 | MS.gene23792:intron | 40.0% | |
| TCAAACATGTAGATTGGTGC+TGG | - | chr8.4:30602803-30602822 | MS.gene23792:CDS | 40.0% | |
| TCAAGTGGATCACTATGCAT+TGG | + | chr8.4:30603497-30603516 | None:intergenic | 40.0% | |
| TCAGTATGCTCCAAAGTCAT+AGG | + | chr8.4:30603473-30603492 | None:intergenic | 40.0% | |
| TGAAAAGAAACAGGCTGATC+TGG | - | chr8.4:30602624-30602643 | MS.gene23792:CDS | 40.0% | |
| TGTAAGCTCTGTCAGCTATA+TGG | + | chr8.4:30604843-30604862 | None:intergenic | 40.0% | |
| TTCACCTATCTCGGAATCAT+TGG | + | chr8.4:30604319-30604338 | None:intergenic | 40.0% | |
| TTCTCCAGAAGAAAACATGC+TGG | + | chr8.4:30605670-30605689 | None:intergenic | 40.0% | |
| TTGTGTACAACACAAGGGTA+AGG | + | chr8.4:30602441-30602460 | None:intergenic | 40.0% | |
| TTTCTTGGTTGAGCTATCTC+TGG | - | chr8.4:30605194-30605213 | MS.gene23792:CDS | 40.0% | |
| ! | GTCAAGTTGTTCATCCATGT+AGG | + | chr8.4:30604507-30604526 | None:intergenic | 40.0% |
| ! | TGAACCAGCATGTTTTCTTC+TGG | - | chr8.4:30605663-30605682 | MS.gene23792:CDS | 40.0% |
| ! | TTGCGCTTTTGCATGTAAAG+CGG | - | chr8.4:30603881-30603900 | MS.gene23792:intron | 40.0% |
| ! | TTTTCTTGGCATAACTGCGT+TGG | + | chr8.4:30602169-30602188 | None:intergenic | 40.0% |
| !! | AGAACAGAAGAGCTTTAGGA+GGG | - | chr8.4:30602388-30602407 | MS.gene23792:intron | 40.0% |
| !! | ATGGTGGTGGAAGAATTGTT+GGG | - | chr8.4:30602364-30602383 | MS.gene23792:intron | 40.0% |
| AAACACAGCCAAGATACTGC+AGG | + | chr8.4:30604478-30604497 | None:intergenic | 45.0% | |
| ACCCTCTTGTGTACAACACA+AGG | + | chr8.4:30602447-30602466 | None:intergenic | 45.0% | |
| ACCCTTGTGTTGTACACAAG+AGG | - | chr8.4:30602442-30602461 | MS.gene23792:intron | 45.0% | |
| ATGAATCAAGTGGGTCATGG+TGG | - | chr8.4:30602348-30602367 | MS.gene23792:intron | 45.0% | |
| CATCATCCTCACCTTGTGAT+GGG | + | chr8.4:30602658-30602677 | None:intergenic | 45.0% | |
| CCCTCTTGTGTACAACACAA+GGG | + | chr8.4:30602446-30602465 | None:intergenic | 45.0% | |
| CCCTTGTGTTGTACACAAGA+GGG | - | chr8.4:30602443-30602462 | MS.gene23792:intron | 45.0% | |
| CTGTCAGTGGTTTCAAACAC+TGG | - | chr8.4:30605286-30605305 | MS.gene23792:intron | 45.0% | |
| CTGTGTTTCACCAACCTACA+TGG | - | chr8.4:30604490-30604509 | MS.gene23792:intron | 45.0% | |
| GAAACAGTGTCTCTTGCATG+AGG | + | chr8.4:30604684-30604703 | None:intergenic | 45.0% | |
| GAGTTCATCATCAATGGCGA+TGG | + | chr8.4:30603426-30603445 | None:intergenic | 45.0% | |
| GCATAGTGATCCACTTGAGA+TGG | - | chr8.4:30603499-30603518 | MS.gene23792:intron | 45.0% | |
| GGAATGAATCAAGTGGGTCA+TGG | - | chr8.4:30602345-30602364 | MS.gene23792:intron | 45.0% | |
| GGTTGAGATGGAGGATATAG+AGG | - | chr8.4:30603614-30603633 | MS.gene23792:intron | 45.0% | |
| TAGCTGACAGAGCTTACACA+AGG | - | chr8.4:30604845-30604864 | MS.gene23792:intron | 45.0% | |
| TGACCTCAATGAGAGGATGA+GGG | - | chr8.4:30604523-30604542 | MS.gene23792:intron | 45.0% | |
| TGAGGGCTATACTAGTTGAC+TGG | - | chr8.4:30604540-30604559 | MS.gene23792:intron | 45.0% | |
| TTAGGAAGAGGTTGAGATGG+AGG | - | chr8.4:30603605-30603624 | MS.gene23792:intron | 45.0% | |
| TTATCGAAACAGTGCCCTAG+TGG | + | chr8.4:30605391-30605410 | None:intergenic | 45.0% | |
| TTGACCTCAATGAGAGGATG+AGG | - | chr8.4:30604522-30604541 | MS.gene23792:intron | 45.0% | |
| ! | ACAGGAGTGCATAGGAAGTA+TGG | - | chr8.4:30605610-30605629 | MS.gene23792:intron | 45.0% |
| ! | ACTAGTTGACTGGCTGATTG+AGG | - | chr8.4:30604550-30604569 | MS.gene23792:intron | 45.0% |
| ! | AGTTTCTGTGCCTGTCGTTT+CGG | - | chr8.4:30604810-30604829 | MS.gene23792:intron | 45.0% |
| ! | GCTTTTGGCATGCAAGTATG+AGG | - | chr8.4:30604786-30604805 | MS.gene23792:intron | 45.0% |
| ! | TTTGAAACAGCTTGAGCTGG+TGG | - | chr8.4:30605167-30605186 | MS.gene23792:intron | 45.0% |
| !! | AGGTTTGCTGCACAAATTGC+TGG | - | chr8.4:30603236-30603255 | MS.gene23792:intron | 45.0% |
| !! | CAGAACAGAAGAGCTTTAGG+AGG | - | chr8.4:30602387-30602406 | MS.gene23792:intron | 45.0% |
| !! | CATGGTGGTGGAAGAATTGT+TGG | - | chr8.4:30602363-30602382 | MS.gene23792:intron | 45.0% |
| !! | TAGAGAGTGCTCTATGCTGA+TGG | - | chr8.4:30605552-30605571 | MS.gene23792:intron | 45.0% |
| !! | TTGAGCATCGACTTCTCCTA+CGG | + | chr8.4:30604980-30604999 | None:intergenic | 45.0% |
| !!! | TGAGCTGGTGGCTTTTTTCT+TGG | - | chr8.4:30605179-30605198 | MS.gene23792:CDS | 45.0% |
| !!! | TGGTCTTGTTGCCATGCTTT+TGG | - | chr8.4:30604771-30604790 | MS.gene23792:intron | 45.0% |
| AATCAAGTGGGTCATGGTGG+TGG | - | chr8.4:30602351-30602370 | MS.gene23792:intron | 50.0% | |
| ACAGCCAAGATACTGCAGGA+AGG | + | chr8.4:30604474-30604493 | None:intergenic | 50.0% | |
| ACAGCTCAATGCACTGTCAG+TGG | - | chr8.4:30605273-30605292 | MS.gene23792:intron | 50.0% | |
| ACTGGAACAAGACATGCGAG+TGG | - | chr8.4:30605304-30605323 | MS.gene23792:intron | 50.0% | |
| ATGCACTCCTGTCAGTTTCC+CGG | + | chr8.4:30605602-30605621 | None:intergenic | 50.0% | |
| CATAGACCCATCACAAGGTG+AGG | - | chr8.4:30602649-30602668 | MS.gene23792:intron | 50.0% | |
| CCAACCAGAGCCTATGACTT+TGG | - | chr8.4:30603460-30603479 | MS.gene23792:intron | 50.0% | |
| CTCACAGCAATCCTATGCTG+AGG | - | chr8.4:30603259-30603278 | MS.gene23792:intron | 50.0% | |
| CTTGGTTGAGCTATCTCTGG+TGG | - | chr8.4:30605197-30605216 | MS.gene23792:CDS | 50.0% | |
| GAGTGCTCTATGCTGATGGT+TGG | - | chr8.4:30605556-30605575 | MS.gene23792:intron | 50.0% | |
| GCATCATCCTCACCTTGTGA+TGG | + | chr8.4:30602659-30602678 | None:intergenic | 50.0% | |
| GCTGAAGTTTCCACCATCCT+TGG | - | chr8.4:30605230-30605249 | MS.gene23792:intron | 50.0% | |
| GGGCAGAACAGAAGAGCTTT+AGG | - | chr8.4:30602384-30602403 | MS.gene23792:intron | 50.0% | |
| GTTGGATTCCACCAGAAAGC+CGG | - | chr8.4:30605574-30605593 | MS.gene23792:intron | 50.0% | |
| TAGCCCTCATCCTCTCATTG+AGG | + | chr8.4:30604529-30604548 | None:intergenic | 50.0% | |
| TGCTCCAAAGTCATAGGCTC+TGG | + | chr8.4:30603467-30603486 | None:intergenic | 50.0% | |
| TGGATCAGATCCGAAACGAC+AGG | + | chr8.4:30604823-30604842 | None:intergenic | 50.0% | |
| TGGGACATAGACCCATCACA+AGG | - | chr8.4:30602644-30602663 | MS.gene23792:CDS | 50.0% | |
| ! | CCAAAGTCATAGGCTCTGGT+TGG | + | chr8.4:30603463-30603482 | None:intergenic | 50.0% |
| ! | GGAAACTGACAGGAGTGCAT+AGG | - | chr8.4:30605602-30605621 | MS.gene23792:intron | 50.0% |
| !! | ATAGGCTCTGGTTGGTCTTC+TGG | + | chr8.4:30603455-30603474 | None:intergenic | 50.0% |
| GACTGCAGCAGCAGCAACCA+AGG | + | chr8.4:30605250-30605269 | None:intergenic | 60.0% | |
| GCAGCAGCAACCAAGGATGG+TGG | + | chr8.4:30605243-30605262 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAACCAAGGA+TGG | + | chr8.4:30605246-30605265 | None:intergenic | 60.0% | |
| TCCTGTCAGTTTCCCGGCTC+CGG | + | chr8.4:30605596-30605615 | None:intergenic | 60.0% | |
| TTCCACCAGAAAGCCGGAGC+CGG | - | chr8.4:30605580-30605599 | MS.gene23792:intron | 60.0% | |
| GTTTCCCGGCTCCGGCTTTC+TGG | + | chr8.4:30605588-30605607 | None:intergenic | 65.0% | |
| TCCACCAGAAAGCCGGAGCC+GGG | - | chr8.4:30605581-30605600 | MS.gene23792:intron | 65.0% | |
| GCCGGAGCCGGGAAACTGAC+AGG | - | chr8.4:30605592-30605611 | MS.gene23792:intron | 70.0% | |
| TCCCGGCTCCGGCTTTCTGG+TGG | + | chr8.4:30605585-30605604 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 30602138 | 30605705 | 30602138 | ID=MS.gene23792 |
| chr8.4 | mRNA | 30602138 | 30605705 | 30602138 | ID=MS.gene23792.t1;Parent=MS.gene23792 |
| chr8.4 | exon | 30605648 | 30605705 | 30605648 | ID=MS.gene23792.t1.exon1;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30605648 | 30605705 | 30605648 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30605368 | 30605500 | 30605368 | ID=MS.gene23792.t1.exon2;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30605368 | 30605500 | 30605368 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30605178 | 30605234 | 30605178 | ID=MS.gene23792.t1.exon3;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30605178 | 30605234 | 30605178 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30604563 | 30604608 | 30604563 | ID=MS.gene23792.t1.exon4;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30604563 | 30604608 | 30604563 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30604323 | 30604463 | 30604323 | ID=MS.gene23792.t1.exon5;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30604323 | 30604463 | 30604323 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30604109 | 30604234 | 30604109 | ID=MS.gene23792.t1.exon6;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30604109 | 30604234 | 30604109 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30603272 | 30603361 | 30603272 | ID=MS.gene23792.t1.exon7;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30603272 | 30603361 | 30603272 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30602958 | 30603179 | 30602958 | ID=MS.gene23792.t1.exon8;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30602958 | 30603179 | 30602958 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30602762 | 30602860 | 30602762 | ID=MS.gene23792.t1.exon9;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30602762 | 30602860 | 30602762 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30602488 | 30602666 | 30602488 | ID=MS.gene23792.t1.exon10;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30602488 | 30602666 | 30602488 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| chr8.4 | exon | 30602138 | 30602288 | 30602138 | ID=MS.gene23792.t1.exon11;Parent=MS.gene23792.t1 |
| chr8.4 | CDS | 30602138 | 30602288 | 30602138 | ID=cds.MS.gene23792.t1;Parent=MS.gene23792.t1 |
| Gene Sequence |
| Protein sequence |
